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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061738 ID=TCONS_00061738|Name=TCONS_00061738|organism=Clytia hemisphaerica|type=transcript|length=1323bp
gtaagtaAGCGCTGTCAACTTagtaaaatttaataaaaaaagaattgcgG
ATAGGTTTTGCTTCCCACTGTAAGACGAGATCCCATCAAGTTACTCTGTA
AATGTGATAACGTcgttcaatttttattttgataatagCTATGGTCAAAA
TCTAAAAGCGGGTAGTCCCGGTCGATTCTTCTTTACCGCTTTCCATGACC
GATCGAAAGCAGCTGAACATATTACGGTAGGCTTTTCTATAAGGTTTACT
TGAAGCTCCATAAATGAACACATTTCCAATACTGTTCAAATAAGTTAAAC
ACGATAGCAAAATCATTGTTATCAAATAACAagcagggtcggatacagga
ggtaggctatcttattcatggagagtaattagtttccatataaggtaata
cgataataaagtgcactctcctccattggttatagcctccctctgtatcc
gaccCTGTAACAAGAGTCCTTTTCTTGCCCTGAAAATCCTCGAAACCATA
ATCGGTAACAAATGTAGGGTATCCAGAGTACGAAAAAAGTAACCATTATA
TAAATAAAGATAACATTCTTCTTATAATGTCTCTTAGATTCCCGATTCTG
GTTGCTCGTAGTCCCTGGGTTAACCCTCTTGCTTTTGATGTCTCTCAGAT
GCCGTAACACTTGCTTCTGTATGTAAACATAGACTACAGAATTCACCACT
AACGGTAAAACGTTACTCAAGCTCATATGAATCAGGTTTATCTCAGAATA
ATGATACTCCATAAGAATAAACAGCCCGATAGAATAAATCCATATAATGA
TGTAACATGTTAAGACGTGTTTACGATTGAAAAACAATGTCTTGAACGGG
TATCTGATCGCAATAAATCTTTCCAAACTCATCAACATTAACACGAAACT
TGCCATCGGTAGTATggtgaaaaaacaaaatattcaaataatttaataat
aGTCGAGACTTGCATATTTTCTCACCAAGAATATCAAATATGTTTGGATT
TGAGCACAGGAAATACGTACCATCTAACGGCATTAGTATAAAAGATATGA
GAAAGTCTGATGCGGCTAATAATACGATTAGTAGCTCCTGAGTAGTTTTG
TAGAACTTATATTTCTTTGCAATCACGCAAATAAAGAAATTGCTAAACGT
TCCCAGTATCGATAGGATAAGTAGTATAAAACCAATTATTGTGTCCCTCA
GAATTTTTGCAGGCGTTTTAACAAAACNCGCAAATAAAGAAATTGCTAAA
CATTCCCAGTATCGATAGGATAAGTAGTATAAAACCAATTATTGTGTCCC
TCAGAATTTTTGCAGGCGTTTTA Run BLAST on NCBI protein sequence of TCONS_00061738-protein >TCONS_00061738-protein ID=TCONS_00061738-protein|Name=TCONS_00061738-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
MASFVLMLMSLERFIAIRYPFKTLFFNRKHVLTCYIIIWIYSIGLFILME
YHYSEINLIHMSLSNVLPLVVNSVVYVYIQKQVLRHLRDIKSKRVNPGTT
SNQNRESKRHYKKNVIFIYIMVTFFVLWIPYICYRLWFRGFSGQEKDSCY
RVGYRGRL Run BLAST on NCBI transcript from alignment at scaffold_36:948229..949551 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061738 ID=TCONS_00061738|Name=TCONS_00061738|organism=Clytia hemisphaerica|type=transcript|length=1323bp|location=Sequence derived from alignment at scaffold_36:948229..949551 (Clytia hemisphaerica)
TAAAACGCCTGCAAAAATTCTGAGGGACACAATAATTGGTTTTATACTAC
TTATCCTATCGATACTGGGAATGTTTAGCAATTTCTTTATTTGCGNGTTT
TGTTAAAACGCCTGCAAAAATTCTGAGGGACACAATAATTGGTTTTATAC
TACTTATCCTATCGATACTGGGAACGTTTAGCAATTTCTTTATTTGCGTG
ATTGCAAAGAAATATAAGTTCTACAAAACTACTCAGGAGCTACTAATCGT
ATTATTAGCCGCATCAGACTTTCTCATATCTTTTATACTAATGCCGTTAG
ATGGTACGTATTTCCTGTGCTCAAATCCAAACATATTTGATATTCTTGGT
GAGAAAATATGCAAGTCTCGACtattattaaattatttgaatattttgtt
ttttcaccATACTACCGATGGCAAGTTTCGTGTTAATGTTGATGAGTTTG
GAAAGATTTATTGCGATCAGATACCCGTTCAAGACATTGTTTTTCAATCG
TAAACACGTCTTAACATGTTACATCATTATATGGATTTATTCTATCGGGC
TGTTTATTCTTATGGAGTATCATTATTCTGAGATAAACCTGATTCATATG
AGCTTGAGTAACGTTTTACCGTTAGTGGTGAATTCTGTAGTCTATGTTTA
CATACAGAAGCAAGTGTTACGGCATCTGAGAGACATCAAAAGCAAGAGGG
TTAACCCAGGGACTACGAGCAACCAGAATCGGGAATCTAAGAGACATTAT
AAGAAGAATGTTATCTTTATTTATATAATGGTTACTTTTTTCGTACTCTG
GATACCCTACATTTGTTACCGATTATGGTTTCGAGGATTTTCAGGGCAAG
AAAAGGACTCTTGTTACAGggtcggatacagagggaggctataaccaatg
gaggagagtgcactttattatcgtattaccttatatggaaactaattact
ctccatgaataagatagcctacctcctgtatccgaccctgctTGTTATTT
GATAACAATGATTTTGCTATCGTGTTTAACTTATTTGAACAGTATTGGAA
ATGTGTTCATTTATGGAGCTTCAAGTAAACCTTATAGAAAAGCCTACCGT
AATATGTTCAGCTGCTTTCGATCGGTCATGGAAAGCGGTAAAGAAGAATC
GACCGGGACTACCCGCTTTTAGATTTTGACCATAGctattatcaaaataa
aaattgaacgACGTTATCACATTTACAGAGTAACTTGATGGGATCTCGTC
TTACAGTGGGAAGCAAAACCTATCcgcaattctttttttattaaatttta
ctAAGTTGACAGCGCTtacttac Coding sequence (CDS) from alignment at scaffold_36:948229..949551 >TCONS_00061738 ID=TCONS_00061738|Name=TCONS_00061738|organism=Clytia hemisphaerica|type=CDS|length=477bp|location=Sequence derived from alignment at scaffold_36:948229..949551 (Clytia hemisphaerica)
ATGGCAAGTTTCGTGTTAATGTTGATGAGTTTGGAAAGATTTATTGCGAT
CAGATACCCGTTCAAGACATTGTTTTTCAATCGTAAACACGTCTTAACAT
GTTACATCATTATATGGATTTATTCTATCGGGCTGTTTATTCTTATGGAG
TATCATTATTCTGAGATAAACCTGATTCATATGAGCTTGAGTAACGTTTT
ACCGTTAGTGGTGAATTCTGTAGTCTATGTTTACATACAGAAGCAAGTGT
TACGGCATCTGAGAGACATCAAAAGCAAGAGGGTTAACCCAGGGACTACG
AGCAACCAGAATCGGGAATCTAAGAGACATTATAAGAAGAATGTTATCTT
TATTTATATAATGGTTACTTTTTTCGTACTCTGGATACCCTACATTTGTT
ACCGATTATGGTTTCGAGGATTTTCAGGGCAAGAAAAGGACTCTTGTTAC
AGggtcggatacagagggaggctataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061738-exon-scaffold_36-1491911889:948229..949551 | TCONS_00061738-exon-scaffold_36-1491911889:948229..949551 | Clytia hemisphaerica | exon |
| TCONS_00061738-exon-scaffold_36-1510915933:948229..949551 | TCONS_00061738-exon-scaffold_36-1510915933:948229..949551 | Clytia hemisphaerica | exon |
| TCONS_00061738-exon-scaffold_36-1575043694:948229..949551 | TCONS_00061738-exon-scaffold_36-1575043694:948229..949551 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:948229..949551 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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