TCONS_00062002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062002
Unique NameTCONS_00062002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3167

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062002 ID=TCONS_00062002|Name=TCONS_00062002|organism=Clytia hemisphaerica|type=transcript|length=3167bp
ATTCTCCCTTATAGACTACACGAGGAGGGCTTTTAATCCTTTTGGAAAGT
TAGATCTTCAGGATTGATTTCATTGATGagtttcaaagtaaaaaaactgT
CAGTACTTAATGTTCAGATAGAATTTCTTTACTAGATTTATCTGGACTGA
TTGTAATTATCTTCCTTTCTCGTTCAGTAATCAAAGGTACATCGCATGCA
AATATTGGGACAACGACATGCGGAAAGTTTTCCACAAAGGAAGAAAATAA
TTTGGTTTCGAAAGTATATTACTTTATATTTTGCATTACTAATTCCTCGA
GTCAAAGCGTACTAGCGAGATTCTTGAACAAACTGAAGACCATTTTCCCT
GAcgatttttttagattttcaactttAAGACGAGTCTTAGAAGGAACCAC
CCCTTAGAATTCCCTAGAGAGGGAGCTTGGATATTAGTCCTGGCGAGACC
TACGACCAAGTCACCTTTCAAGTAAAGCCTATATATGCATATTAGGAGGC
TAACTCCCCGTACTCGTGATGTTATGGAGGGGAATTACTCCTAGAAAATT
ATTTCAGTCAATCCCTCGAAGATCTCTGGATTTCTGTCGAAAAGGTGAGC
CGAGAAAAAGAGAGTGAAACAGAGGAAGTAAAATCCAAACCGGAAAAATT
GTGAGGTTTCGAAAGAGCTTGAATCTAAGAAAACATTTGCACATGTACCT
GCACAGCTAGTACCAGGCCTTTTGCATATATAGATATTGTGTTGCTTGGG
ACTGGTAAAGAAGTTGTAAGCATCCTATATATCGTGGAGAAACATCATGA
GGACTTCACAATTCATCAGAAGAAAATAAGTTGATAGAAAAACAAAGATT
GGGGACGGAAAAACAAGAGGAATGATGAACGCCGTCACGTTATGTTTGAT
GCTTTTCATTGCATCAGGCGCAGGCGTAGACATTGCATATCGACAAACAG
ACGATTACCAGTTAATATGGTCTGACAAAGAATCAAAAGGCGACAAAGAT
GGTTCAATATGGAGAGTGAAAAATTTCCAGACTGGCTTTTGCTCTTTGGG
GGATGTTGCGAAAGGAAGTCATAGTCGTCCCAACGTCAAAGCTTTACTCG
TCACTGCTAAGAAAGCTGGAGCATTAGCACACCCCGCCAGTTTTACGAAG
ATCTGGACAGATAAAGGATCAGGTGCTGACATGAGTGTCAGTGTATGGAG
AATGAACCCTCCTAGAGGATACAGGTGTCTTGGGGCTGCAGCCATGCCAA
ACCACCATCACCATCCCGATGCATCCAAGTATTGCTGTGTTGGACACCAA
TACGTCACTTCAGCTGGTGTCATCGACGAGTATAATGACAAAGGGTCTGA
CTCAGATTTGGACGGTGCATTTTGGAGGGTTGTCCGTAAAGGTGGAGACT
CTTCCGGGATCTACGGTGGAAACTTCTTGGTCACAACCAACTACCACTCA
AGACCGACCGCAGCTGCTTACCTCTTAAAAGCCAGCGACCTAGTGAAAGA
TGTATGGAGCCTACCCGCTGTCGCCGTAACACCACTGAACATTTATGAGC
AAAACAAATTGGATTTGATTTGGAGTGACCGTGGCTCAGATGCAGACCAC
GACTGTACCATATGGAGGGCAAATAAGCGTAATGGATATTATCCAGTTGG
TGATATGGTAGTCCGTACACATGGCAGACCCAGAGTGGGCTACCTGGTAC
AAATGAGTGATCCCGACAGCGGTGATCTTaaacaaccaatcagctatcgT
CAGATTTGGAGCGATAAAGGATCAGGGGCTGACATGAGTGTGAAAGTATG
GCGTGCTAACTGCCCCAGTGGTTACGTTGCCCTTGGTGATATAGCAACTG
GAGGCCATTATCCTAAGGGAGGTGAAATGTACTGTGTTCGTTCAAAATAT
GCAGCATACACAGCAGCTTCAAATTGGCAATGGGTTTGGAATGATAAAGG
AAGTGGATCCGATACAGATGTAACTTTCTTCGAAGCAATAACCCGTGGCA
ACAGATTATTACAAAGCACGAGAGGCATGGGTTCTAAAGTGGGTCACCAT
GGCACGCCACATTATGCACCTTTCATACTGAAGAAGTCAGACACAACTTA
TTATGCCGAAAAACCAATTCGCGAAATCAAGTTGAGGAATATGAGATACG
ACTTGTCGAAGAAGAAGATCTCAGGGAAGGCACCACAAGAAATTATCCCG
ACCGTAGTCAACAACATGAGTTCAAAGGAGCAAAAAGGTGGCCGAACAAT
CGAAGTACAAACTTCGAAAACATCATCTTTCGAGATGAGTAGATCAATTT
CTTTTGGGCTTAGTATGGAAGTATCTGGTGATGTCCCAATCATCGGAGGT
GGTGGTTTCTCAGTCACCACGAATTTTGAAACAAGCAAGAGTTATACAAC
AGGAAAGTCGAAGACAGTGACCAAGACAGATTCGGTAACTGCCGAGATTG
TTCTTCCACCATATTCAAGGAGCACTGCTTACATCGTTGGCAACCAATAC
AAAGCGGATATCCCGTACATTGCCACGGTAACCAAGGTCTATTTTGACGG
TACCGAGTCTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCG
CAGAGTACGAAATTACTTATGGTGAGATTACAAAAATCCCTGAGAACGAA
AGAAAACCNTCGCAGAGTACGAAATTACTTTTGGTGAGATTACAAAAATC
CCTGAGAACGaaagaaaaccagtttttggcTAACGGAAgatcttcaattt
taatttaacaaATTAGATTTAGTATTTTAATTAGAGTGGACCGATTTGTA
TCTATTTTACAATTATTTAGTAGTAATTTGCGAAGACCAATTCCAAAGTA
GATAGTGAATAATTTCAGAAGGGAGAAaagaacattatcaataaaTACCA
TCCTAAGACTACAGTTACACTTGCTCCCCTCCCCTTCTAAAAGAAACTTG
CATCCTTCAATCTCCATAAAGACTTACCAATATCTTGCCTTCATTGTTAA
ACGAATCTATCTCTGGTTTTAGATCTAAAATCTGAAAGCATCTAGCCGCT
GACACTTTAGCTGCAACATAATCTGGTGCCATTGATCCAATCTCTCCTGC
AATCATAGCTCCAAAAACTGTCGATAAAACTACCCTGCGAAAAAGCAAGA
AAATAACTTACCTAATT
Run BLAST on NCBI

protein sequence of TCONS_00062002-protein

>TCONS_00062002-protein ID=TCONS_00062002-protein|Name=TCONS_00062002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=628bp
MMNAVTLCLMLFIASGAGVDIAYRQTDDYQLIWSDKESKGDKDGSIWRVK
NFQTGFCSLGDVAKGSHSRPNVKALLVTAKKAGALAHPASFTKIWTDKGS
GADMSVSVWRMNPPRGYRCLGAAAMPNHHHHPDASKYCCVGHQYVTSAGV
IDEYNDKGSDSDLDGAFWRVVRKGGDSSGIYGGNFLVTTNYHSRPTAAAY
LLKASDLVKDVWSLPAVAVTPLNIYEQNKLDLIWSDRGSDADHDCTIWRA
NKRNGYYPVGDMVVRTHGRPRVGYLVQMSDPDSGDLKQPISYRQIWSDKG
SGADMSVKVWRANCPSGYVALGDIATGGHYPKGGEMYCVRSKYAAYTAAS
NWQWVWNDKGSGSDTDVTFFEAITRGNRLLQSTRGMGSKVGHHGTPHYAP
FILKKSDTTYYAEKPIREIKLRNMRYDLSKKKISGKAPQEIIPTVVNNMS
SKEQKGGRTIEVQTSKTSSFEMSRSISFGLSMEVSGDVPIIGGGGFSVTT
NFETSKSYTTGKSKTVTKTDSVTAEIVLPPYSRSTAYIVGNQYKADIPYI
ATVTKVYFDGTESTQEMSGVFKGVQIAEYEITYGEITKIPENERKXSQST
KLLLVRLQKSLRTKENQFLANGRSSILI
Run BLAST on NCBI

transcript from alignment at scaffold_361:613700..617508-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062002 ID=TCONS_00062002|Name=TCONS_00062002|organism=Clytia hemisphaerica|type=transcript|length=3809bp|location=Sequence derived from alignment at scaffold_361:613700..617508- (Clytia hemisphaerica)
ATTCTCCCTTATAGACTACACGAGGAGGGCTTTTAATCCTTTTGGAAAGT
TAGATCTTCAGGATTGATTTCATTGATGAGTTTCAAAGTAAAAAAACTGT
CAGTACTTAATGTTCAGATAGAATTTCTTTACTAGATTTATCTGGACTGA
TTGTAATTATCTTCCTTTCTCGTTCAGTAATCAAAGGTACATCGCATGCA
AATATTGGGACAACGACATGCGGAAAGTTTTCCACAAAGGAAGAAAATAA
TTTGGTTTCGAAAGTATATTACTTTATATTTTGCATTACTAATTCCTCGA
GTCAAAGCGTACTAGCGAGATTCTTGAACAAACTGAAGACCATTTTCCCT
GACGATTTTTTTAGATTTTCAACTTTAAGACGAGTCTTAGAAGGAACCAC
CCCTTAGAATTCCCTAGAGAGGGAGCTTGGATATTAGTCCTGGCGAGACC
TACGACCAAGTCACCTTTCAAGTAAAGCCTATATATGCATATTAGGAGGC
TAACTCCCCGTACTCGTGATGTTATGGAGGGGAATTACTCCTAGAAAATT
ATTTCAGTCAATCCCTCGAAGATCTCTGGATTTCTGTCGAAAAGGTGAGC
CGAGAAAAAGAGAGTGAAACAGAGGAAGTAAAATCCAAACCGGAAAAATT
GTGAGGTTTCGAAAGAGCTTGAATCTAAGAAAACATTTGCACATGTACCT
GCACAGCTAGTACCAGGCCTTTTGCATATATAGATATTGTGTTGCTTGGG
ACTGGTAAAGAAGTTGTAAGCATCCTATATATCGTGGAGAAACATCATGA
GGACTTCACAATTCATCAGAAGAAAATAAGTTGATAGAAAAACAAAGATT
GGGGACGGAAAAACAAGAGGTAAGGTAATTCCTTTGGAATTTTGTTTGTC
CTGAGAAACAGTAATACTAACAATGAATTAACTTCAGGTTGAGCATGTTG
CGATAGACCACGAGAAATGTGTTCAAACAATATTTCCTCAAATAATTATG
GCACTTATTTTTGGTAACACCACGCTCTTTCACTGTGGCGCTTATAAAAG
GGAAGCGCTTGACAACAAAGAATGAGATCATCAGAGAATGAAAACAGTCG
TGACACTATTCATGGGAGCCATCCTGGCTGAACAAAGATAGCTTAATCCT
TCGTATAAACACTGCATAAATTATCTATTCCAGGAATGATGAACGCCGTC
ACGTTATGTTTGATGCTTTTCATTGCATCAGGCGCAGGCGTAGACATTGC
ATATCGACAAACAGACGATTACCAGTTAATATGGTCTGACAAAGAATCAA
AAGGCGACAAAGATGGTTCAATATGGAGAGTGAAAAATTTCCAGACTGGC
TTTTGCTCTTTGGGGGATGTTGCGAAAGGAAGTCATAGTCGTCCCAACGT
CAAAGCTTTACTCGTCACTGCTAAGAAAGCTGGAGCATTAGCACACCCCG
CCAGTTTTACGAAGATCTGGACAGATAAAGGATCAGGTGCTGACATGAGT
GTCAGTGTATGGAGAATGAACCCTCCTAGAGGATACAGGTGTCTTGGGGC
TGCAGCCATGCCAAACCACCATCACCATCCCGATGCATCCAAGTATTGCT
GTGTTGGACACCAATACGTCACTTCAGCTGGTGTCATCGACGAGTATAAT
GACAAAGGGTCTGACTCAGATTTGGACGGTGCATTTTGGAGGGTTGTCCG
TAAAGGTGGAGACTCTTCCGGGATCTACGGTGGAAACTTCTTGGTCACAA
CCAACTACCACTCAAGACCGACCGCAGCTGCTTACCTCTTAAAAGCCAGC
GACCTAGTGAAAGATGTATGGAGCCTACCCGCTGTCGCCGTAACACCACT
GAACATTTATGAGCAAAACAAATTGGATTTGATTTGGAGTGACCGTGGCT
CAGATGCAGACCACGACTGTACCATATGGAGGGCAAATAAGCGTAATGGA
TATTATCCAGTTGGTGATATGGTAGTCCGTACACATGGCAGACCCAGAGT
GGGCTACCTGGTACAAATGAGTGATCCCGACAGCGGTGATCTTAAACAAC
CAATCAGCTATCGTCAGATTTGGAGCGATAAAGGATCAGGGGCTGACATG
AGTGTGAAAGTATGGCGTGCTAACTGCCCCAGTGGTTACGTTGCCCTTGG
TGATATAGCAACTGGAGGCCATTATCCTAAGGGAGGTGAAATGTACTGTG
TTCGTTCAAAATATGCAGCATACACAGCAGCTTCAAATTGGCAATGGGTT
TGGAATGATAAAGGAAGTGGATCCGATACAGATGTAACTTTCTTCGAAGC
AATAACCCGTGGCAACAGATTATTACAAAGCACGAGAGGCATGGGTTCTA
AAGTGGGTCACCATGGCACGCCACATTATGCACCTTTCATACTGAAGAAG
TCAGACACAACTTATTATGCCGAAAAACCAATTCGCGAAATCAAGTTGAG
GAATATGAGGTAACGTTTATATGAATTTTTTTTTTTTCAAAAACTTTGAG
ACAAAGTGTATTGTAACTTTGTGTGTTTCATTTAAAAAAAAATATTTCAT
TGGTCTACTTTTCCTTTAGATACGACTTGTCGAAGAAGAAGATCTCAGGG
AAGGCACCACAAGAAATTATCCCGACCGTAGTCAACAACATGAGTTCAAA
GGAGCAAAAAGGTGGCCGAACAATCGAAGTACAAACTTCGAAAACATCAT
CTTTCGAGATGAGTAGATCAATTTCTTTTGGGCTTAGTATGGAAGTATCT
GGTGATGTCCCAATCATCGGAGGTGGTGGTTTCTCAGTCACCACGAATTT
TGAAACAAGCAAGAGTTATACAACAGGTTAGTTTTCCATTTTTTCCAAGA
TTTATATAATGTTCTGAAGAAAGAAAAGGACGCGACACATTTTTCTCAAA
TTATCATCTTGCTCTTTCCCTATCCATTCTCCTGTGTTCTTTGAAGCTAC
ACAGTCAGTGTTTTTCTCTAGCAAGGTCTCTTAACAAAAGATTTTTAATC
TAAAAAAAGACTCCCTAGTTACTTTGTCTGTTTCAATCAAATAGGAAAGT
CGAAGACAGTGACCAAGACAGATTCGGTAACTGCCGAGATTGTTCTTCCA
CCATATTCAAGGAGCACTGCTTACATCGTTGGCAACCAATACAAAGCGGA
TATCCCGTACATTGCCACGGTAACCAAGGTCTATTTTGACGGTACCGAGT
CTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCGCAGAGTAC
GAAATTACTTATGGTGAGATTACAAAAATCCCTGAGAACGAAAGAAAACC
NTCGCAGAGTACGAAATTACTTTTGGTGAGATTACAAAAATCCCTGAGAA
CGAAAGAAAACCAGTTTTTGGCTAACGGAAGATCTTCAATTTTAATTTAA
CAAATTAGATTTAGTATTTTAATTAGAGTGGACCGATTTGTATCTATTTT
ACAATTATTTAGTAGTAATTTGCGAAGACCAATTCCAAAGTAGATAGTGA
ATAATTTCAGAAGGGAGAAAAGAACATTATCAATAAATACCATCCTAAGA
CTACAGTTACACTTGCTCCCCTCCCCTTCTAAAAGAAACTTGCATCCTTC
AATCTCCATAAAGACTTACCAATATCTTGCCTTCATTGTTAAACGAATCT
ATCTCTGGTTTTAGATCTAAAATCTGAAAGCATCTAGCCGCTGACACTTT
AGCTGCAACATAATCTGGTGCCATTGATCCAATCTCTCCTGCAATCATAG
CTCCAAAAACTGTCGATAAAACTACCCTGCGAAAAAGCAAGAAAATAACT
TACCTAATT

Coding sequence (CDS) from alignment at scaffold_361:613700..617508-

>TCONS_00062002 ID=TCONS_00062002|Name=TCONS_00062002|organism=Clytia hemisphaerica|type=CDS|length=5661bp|location=Sequence derived from alignment at scaffold_361:613700..617508- (Clytia hemisphaerica)
GAAAGTCGAAGACAGTGACCAAGACAGATTCGGTAACTGCCGAGATTGTT
CTTCCACCATATTCAAGGAGCACTGCTTACATCGTTGGCAACCAATACAA
AGCGGATATCCCGTACATTGCCACGGTAACCAAGGTCTATTTTGACGGTA
CCGAGTCTACTCAAGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCGCA
GAGTACGAAATTACTTATGGTGAGATTACAAAAATCCCTGAGAACGAAAG
AAAACCNTCGCAGAGTACGAAATTACTTTTGGTGAGATTACAAAAATCCC
TGAGAACGAAAGAAAACCAGTTTTTGGCTAACGGAAGATCTTCAATTTTA
ATTTAAATACGACTTGTCGAAGAAGAAGATCTCAGGGAAGGCACCACAAG
AAATTATCCCGACCGTAGTCAACAACATGAGTTCAAAGGAGCAAAAAGGT
GGCCGAACAATCGAAGTACAAACTTCGAAAACATCATCTTTCGAGATGAG
TAGATCAATTTCTTTTGGGCTTAGTATGGAAGTATCTGGTGATGTCCCAA
TCATCGGAGGTGGTGGTTTCTCAGTCACCACGAATTTTGAAACAAGCAAG
AGTTATACAACAGATGATGAACGCCGTCACGTTATGTTTGATGCTTTTCA
TTGCATCAGGCGCAGGCGTAGACATTGCATATCGACAAACAGACGATTAC
CAGTTAATATGGTCTGACAAAGAATCAAAAGGCGACAAAGATGGTTCAAT
ATGGAGAGTGAAAAATTTCCAGACTGGCTTTTGCTCTTTGGGGGATGTTG
CGAAAGGAAGTCATAGTCGTCCCAACGTCAAAGCTTTACTCGTCACTGCT
AAGAAAGCTGGAGCATTAGCACACCCCGCCAGTTTTACGAAGATCTGGAC
AGATAAAGGATCAGGTGCTGACATGAGTGTCAGTGTATGGAGAATGAACC
CTCCTAGAGGATACAGGTGTCTTGGGGCTGCAGCCATGCCAAACCACCAT
CACCATCCCGATGCATCCAAGTATTGCTGTGTTGGACACCAATACGTCAC
TTCAGCTGGTGTCATCGACGAGTATAATGACAAAGGGTCTGACTCAGATT
TGGACGGTGCATTTTGGAGGGTTGTCCGTAAAGGTGGAGACTCTTCCGGG
ATCTACGGTGGAAACTTCTTGGTCACAACCAACTACCACTCAAGACCGAC
CGCAGCTGCTTACCTCTTAAAAGCCAGCGACCTAGTGAAAGATGTATGGA
GCCTACCCGCTGTCGCCGTAACACCACTGAACATTTATGAGCAAAACAAA
TTGGATTTGATTTGGAGTGACCGTGGCTCAGATGCAGACCACGACTGTAC
CATATGGAGGGCAAATAAGCGTAATGGATATTATCCAGTTGGTGATATGG
TAGTCCGTACACATGGCAGACCCAGAGTGGGCTACCTGGTACAAATGAGT
GATCCCGACAGCGGTGATCTTAAACAACCAATCAGCTATCGTCAGATTTG
GAGCGATAAAGGATCAGGGGCTGACATGAGTGTGAAAGTATGGCGTGCTA
ACTGCCCCAGTGGTTACGTTGCCCTTGGTGATATAGCAACTGGAGGCCAT
TATCCTAAGGGAGGTGAAATGTACTGTGTTCGTTCAAAATATGCAGCATA
CACAGCAGCTTCAAATTGGCAATGGGTTTGGAATGATAAAGGAAGTGGAT
CCGATACAGATGTAACTTTCTTCGAAGCAATAACCCGTGGCAACAGATTA
TTACAAAGCACGAGAGGCATGGGTTCTAAAGTGGGTCACCATGGCACGCC
ACATTATGCACCTTTCATACTGAAGAAGTCAGACACAACTTATTATGCCG
AAAAACCAATTCGCGAAATCAAGTTGAGGAATATGAGGAAAGTCGAAGAC
AGTGACCAAGACAGATTCGGTAACTGCCGAGATTGTTCTTCCACCATATT
CAAGGAGCACTGCTTACATCGTTGGCAACCAATACAAAGCGGATATCCCG
TACATTGCCACGGTAACCAAGGTCTATTTTGACGGTACCGAGTCTACTCA
AGAAATGAGTGGAGTTTTCAAGGGCGTTCAAATCGCAGAGTACGAAATTA
CTTATGGTGAGATTACAAAAATCCCTGAGAACGAAAGAAAACCNTCGCAG
AGTACGAAATTACTTTTGGTGAGATTACAAAAATCCCTGAGAACGAAAGA
AAACCAGTTTTTGGCTAACGGAAGATCTTCAATTTTAATTTAAATACGAC
TTGTCGAAGAAGAAGATCTCAGGGAAGGCACCACAAGAAATTATCCCGAC
CGTAGTCAACAACATGAGTTCAAAGGAGCAAAAAGGTGGCCGAACAATCG
AAGTACAAACTTCGAAAACATCATCTTTCGAGATGAGTAGATCAATTTCT
TTTGGGCTTAGTATGGAAGTATCTGGTGATGTCCCAATCATCGGAGGTGG
TGGTTTCTCAGTCACCACGAATTTTGAAACAAGCAAGAGTTATACAACAG
ATGATGAACGCCGTCACGTTATGTTTGATGCTTTTCATTGCATCAGGCGC
AGGCGTAGACATTGCATATCGACAAACAGACGATTACCAGTTAATATGGT
CTGACAAAGAATCAAAAGGCGACAAAGATGGTTCAATATGGAGAGTGAAA
AATTTCCAGACTGGCTTTTGCTCTTTGGGGGATGTTGCGAAAGGAAGTCA
TAGTCGTCCCAACGTCAAAGCTTTACTCGTCACTGCTAAGAAAGCTGGAG
CATTAGCACACCCCGCCAGTTTTACGAAGATCTGGACAGATAAAGGATCA
GGTGCTGACATGAGTGTCAGTGTATGGAGAATGAACCCTCCTAGAGGATA
CAGGTGTCTTGGGGCTGCAGCCATGCCAAACCACCATCACCATCCCGATG
CATCCAAGTATTGCTGTGTTGGACACCAATACGTCACTTCAGCTGGTGTC
ATCGACGAGTATAATGACAAAGGGTCTGACTCAGATTTGGACGGTGCATT
TTGGAGGGTTGTCCGTAAAGGTGGAGACTCTTCCGGGATCTACGGTGGAA
ACTTCTTGGTCACAACCAACTACCACTCAAGACCGACCGCAGCTGCTTAC
CTCTTAAAAGCCAGCGACCTAGTGAAAGATGTATGGAGCCTACCCGCTGT
CGCCGTAACACCACTGAACATTTATGAGCAAAACAAATTGGATTTGATTT
GGAGTGACCGTGGCTCAGATGCAGACCACGACTGTACCATATGGAGGGCA
AATAAGCGTAATGGATATTATCCAGTTGGTGATATGGTAGTCCGTACACA
TGGCAGACCCAGAGTGGGCTACCTGGTACAAATGAGTGATCCCGACAGCG
GTGATCTTAAACAACCAATCAGCTATCGTCAGATTTGGAGCGATAAAGGA
TCAGGGGCTGACATGAGTGTGAAAGTATGGCGTGCTAACTGCCCCAGTGG
TTACGTTGCCCTTGGTGATATAGCAACTGGAGGCCATTATCCTAAGGGAG
GTGAAATGTACTGTGTTCGTTCAAAATATGCAGCATACACAGCAGCTTCA
AATTGGCAATGGGTTTGGAATGATAAAGGAAGTGGATCCGATACAGATGT
AACTTTCTTCGAAGCAATAACCCGTGGCAACAGATTATTACAAAGCACGA
GAGGCATGGGTTCTAAAGTGGGTCACCATGGCACGCCACATTATGCACCT
TTCATACTGAAGAAGTCAGACACAACTTATTATGCCGAAAAACCAATTCG
CGAAATCAAGTTGAGGAATATGAGGAAAGTCGAAGACAGTGACCAAGACA
GATTCGGTAACTGCCGAGATTGTTCTTCCACCATATTCAAGGAGCACTGC
TTACATCGTTGGCAACCAATACAAAGCGGATATCCCGTACATTGCCACGG
TAACCAAGGTCTATTTTGACGGTACCGAGTCTACTCAAGAAATGAGTGGA
GTTTTCAAGGGCGTTCAAATCGCAGAGTACGAAATTACTTATGGTGAGAT
TACAAAAATCCCTGAGAACGAAAGAAAACCNTCGCAGAGTACGAAATTAC
TTTTGGTGAGATTACAAAAATCCCTGAGAACGAAAGAAAACCAGTTTTTG
GCTAACGGAAGATCTTCAATTTTAATTTAAATACGACTTGTCGAAGAAGA
AGATCTCAGGGAAGGCACCACAAGAAATTATCCCGACCGTAGTCAACAAC
ATGAGTTCAAAGGAGCAAAAAGGTGGCCGAACAATCGAAGTACAAACTTC
GAAAACATCATCTTTCGAGATGAGTAGATCAATTTCTTTTGGGCTTAGTA
TGGAAGTATCTGGTGATGTCCCAATCATCGGAGGTGGTGGTTTCTCAGTC
ACCACGAATTTTGAAACAAGCAAGAGTTATACAACAGATGATGAACGCCG
TCACGTTATGTTTGATGCTTTTCATTGCATCAGGCGCAGGCGTAGACATT
GCATATCGACAAACAGACGATTACCAGTTAATATGGTCTGACAAAGAATC
AAAAGGCGACAAAGATGGTTCAATATGGAGAGTGAAAAATTTCCAGACTG
GCTTTTGCTCTTTGGGGGATGTTGCGAAAGGAAGTCATAGTCGTCCCAAC
GTCAAAGCTTTACTCGTCACTGCTAAGAAAGCTGGAGCATTAGCACACCC
CGCCAGTTTTACGAAGATCTGGACAGATAAAGGATCAGGTGCTGACATGA
GTGTCAGTGTATGGAGAATGAACCCTCCTAGAGGATACAGGTGTCTTGGG
GCTGCAGCCATGCCAAACCACCATCACCATCCCGATGCATCCAAGTATTG
CTGTGTTGGACACCAATACGTCACTTCAGCTGGTGTCATCGACGAGTATA
ATGACAAAGGGTCTGACTCAGATTTGGACGGTGCATTTTGGAGGGTTGTC
CGTAAAGGTGGAGACTCTTCCGGGATCTACGGTGGAAACTTCTTGGTCAC
AACCAACTACCACTCAAGACCGACCGCAGCTGCTTACCTCTTAAAAGCCA
GCGACCTAGTGAAAGATGTATGGAGCCTACCCGCTGTCGCCGTAACACCA
CTGAACATTTATGAGCAAAACAAATTGGATTTGATTTGGAGTGACCGTGG
CTCAGATGCAGACCACGACTGTACCATATGGAGGGCAAATAAGCGTAATG
GATATTATCCAGTTGGTGATATGGTAGTCCGTACACATGGCAGACCCAGA
GTGGGCTACCTGGTACAAATGAGTGATCCCGACAGCGGTGATCTTAAACA
ACCAATCAGCTATCGTCAGATTTGGAGCGATAAAGGATCAGGGGCTGACA
TGAGTGTGAAAGTATGGCGTGCTAACTGCCCCAGTGGTTACGTTGCCCTT
GGTGATATAGCAACTGGAGGCCATTATCCTAAGGGAGGTGAAATGTACTG
TGTTCGTTCAAAATATGCAGCATACACAGCAGCTTCAAATTGGCAATGGG
TTTGGAATGATAAAGGAAGTGGATCCGATACAGATGTAACTTTCTTCGAA
GCAATAACCCGTGGCAACAGATTATTACAAAGCACGAGAGGCATGGGTTC
TAAAGTGGGTCACCATGGCACGCCACATTATGCACCTTTCATACTGAAGA
AGTCAGACACAACTTATTATGCCGAAAAACCAATTCGCGAAATCAAGTTG
AGGAATATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038865XLOC_038865Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062002-proteinTCONS_00062002-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062002-exon-scaffold_361-1575043694:616640..617508TCONS_00062002-exon-scaffold_361-1575043694:616640..617508Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1575043694:615050..616325TCONS_00062002-exon-scaffold_361-1575043694:615050..616325Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1575043694:614683..614939TCONS_00062002-exon-scaffold_361-1575043694:614683..614939Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1575043694:613700..614464TCONS_00062002-exon-scaffold_361-1575043694:613700..614464Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1510915933:616640..617508TCONS_00062002-exon-scaffold_361-1510915933:616640..617508Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1510915933:615050..616325TCONS_00062002-exon-scaffold_361-1510915933:615050..616325Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1510915933:614683..614939TCONS_00062002-exon-scaffold_361-1510915933:614683..614939Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1510915933:613700..614464TCONS_00062002-exon-scaffold_361-1510915933:613700..614464Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1491911889:616640..617508TCONS_00062002-exon-scaffold_361-1491911889:616640..617508Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1491911889:615050..616325TCONS_00062002-exon-scaffold_361-1491911889:615050..616325Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1491911889:614683..614939TCONS_00062002-exon-scaffold_361-1491911889:614683..614939Clytia hemisphaericaexon
TCONS_00062002-exon-scaffold_361-1491911889:613700..614464TCONS_00062002-exon-scaffold_361-1491911889:613700..614464Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:613700..617508 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.284206	0.282202	0.454638	0.178808	0.906864	0.491762	0.721664	0.800336	0.905144	0.975944	2.49952	0.778948	0.925784	0.711019	0.306641	1.17276	0.995064	0.593019	1.04293	1.15328	1.12091	1.05134	0.203586	0.111986	0.603449	1.23554	1.16539	1.57243	1.441	0.892669
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009291Vps62
IPR005830Aerolysn
Vocabulary: Biological Process
TermDefinition
GO:0009405pathogenesis
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009405 pathogenesis
cellular_component GO:0005576 extracellular region
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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