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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061930 ID=TCONS_00061930|Name=TCONS_00061930|organism=Clytia hemisphaerica|type=transcript|length=4682bp
TAGAGAATAAAAATTCAACAGGGTTTTGAAATCGTATTTGCCTATTCAAA
ttcacttttgagtctttcccAAGATGTCAAGTGAAGACCTTTCAAATGGC
ACCGGCGTCGTGAATGGAGGCCTTGAGATTGACTCTATGGTGCCGAGTAG
CAAAATCGACGGTGTACCTCGATTCAGGATTTCGAAAACACCAGCtgcaa
atgacgtcacagataTGTTAGATGCCGCTTCCAAACAAAATGGAACGATG
CCGCCCTCAATCATGACACCTGGTATAGAAAAGGCGGATGATGCTGTTCA
AGAAACGCCCGCCTCACCAACCGAAAAGCAAGAGAAACATGTTCATCTAT
ACCTGCCGACAGACCATAATGACACATTGCAACACAACCGTACACATACC
AATACACAGACTATGGGCTATCTGACTCATGACGCTGTTCCCTTGTCTGT
CTTCTATCGCAACCAGGAATCGATGGAAAATATCGCTGGTGGTAAAAGAC
CGACATTAGATCAACTTCATAAGGGTGAAGGCCTTGAACATGCTAAGAAA
AGACATTGGGATGCATCCAAAACGGTTGAACCTGTCAAAGGGATCTCCGA
CATAGAAAGTACCGGTGAAAACAAGAAGGGTGCTGTCAAGTTAGGGTGGA
TCAAGGGCGTATTATTTCCCACCCTATTGAACATTTGGGGCGTAATTCTA
TTTCTACGAATGCCATGGATTGTAGCAAACGCTGGGATTGGTTTATCTTC
GGTTGTTGTGATCTTGGCAACTTGTGTGACCACCATTACTGCTCTCTCCA
TGTCTGCTATCTGCACCAATGGTGAAGTCAAAGGAGGTATTAAGTTTATC
TGGTTTTCCTCTTCCTTTTGGacatttgtgaaatattggTGTTTGACTTT
ACTGACTTGATAATATCGTTTAAAGGTGTTCATTCGTTACTCGGATATTA
ATGAACTAGATTTTCACGCCGCGTCAATCTCGAACTCAGTTCCTTTgcga
ttctgatagcgctcagtGCTCATAAaaggacgatagcatcgtctagtctA
TCAGTAAAAATTCAAGAAGTGGTagaagtggctctgggtacgagattgac
CTACTGACATAAACTATATGTATCTGAAGGAACCGAGAAGGAGTTTAAGC
CTCACTCctttaaatgaaaaacaaaaatgattgacCTGCGAATTTACTAT
CTTGTTATCTGTAGGAGGTGCCTACTTTCTCATTTCCCGATCACTCGGTC
CGGAATTCGGTGGCTCCATTGGTATCATCTTTTCCATCGCAAACGCAGTA
GCCGTCGCACTCTACTTGGTGGGTTTTGGTGAAACTGTACAAGCTTTGAT
GGGGAAGGATGGAATCTTTATGGTGGATGTGAAAAATGATGTTCGGATTA
TTGGTCTCATTGCTCTTGTTCTCTGCTTCATCATCACGCAAGTCGGTCTT
GATTGGGTCATCCACACACAATCCGGCCTGTTGGCGTTGTTGGGTGCAGC
CATCATCAGTGTGATTGCAGGAACAGCTTATCCGAACCCACAATCGTCAC
GTGACACAATGGAACAATACGGACTACCCGGATATTCCGGTGAACTATTC
AAAACGAACTTCGGTCCAGATTATGAGAACGGTGTTGGTTTTTTCGACGT
CTTCTCCATCTTTTTCCCTGCTGCAACAGGAATCATGGCTGGAGCGAACT
TATCAGGTGATCTCAAAAATCCATCACAAGCCGTCCCATGGGGTACCCTT
ATTGCTATCGTAGTCACTTCCGCAGTGTACGTCTTGCTATGTTGGCTCTT
GGGCTCCTCAACCATGCGTTTTGCACAAGGCCCAATCTCTTTGATGGCAA
GTGGATTGAATGATACCCTTAACAACACCCTTAGCAACAGcacaacgaca
acgaccaccGTCACAACAACGCTGGCAAATGTCGAGGATTATGAGTTCGG
TGCGAGAAACGATTTACAGATCATCGAGAGAATCTCGTTATGGGGACCAC
TGGTTTTGATCGGAATCTTTGCAGCCACATTATCATCTGCACTTGCATCT
CTTGTTAGCGCTCCAAAAGTATTCCAAGCAGTCTCTAAAGACAAAATTTT
TCCAGGGATCGAAATCTTCGCTAAAGGATATGGTCGCTCAAACGAACCGA
GGAACGGCTATTTCTTGACTTTAATCATTGCTGCAGGATTCATTGCTATC
GGTGAACTAAATGTCATTGCTCCAATCATCTCTAATTTCTTCTTGATGGC
GTACGCCCTTATCAATTATGCTGTttTTGCTTCCTCACTTTCCAAATCAC
CTGGCTGGCGTCCAGCCTTCAAATATTACAACATGTGGATTTCATTTATT
GGTTTCTTGCTGTGCATGGCTATCATGTTTATGATCAATTGGTGGGCCGC
CCTCATCACCCTTCTCGCTGTGGCGGGGTTGTACAAATGGGTTGATGTGC
GAAAACCTGATATCAATTGGGGCTCGTCAGGGCAGGCTCATACATTCTTG
AAAGCATTACGTTTCACGAGACGTTTAGAAGAAATCGAGGATCATGTCAA
GAACTTCCGCATCCAATGTTTATGTTTGACCGGTCAACCTTCCCTCCGTC
CAAATCTCGTCCATTTTGCTTCACATATTACTAAACACTTGGGAATGTTA
GTCTGTGGTGAAGTTGTCATCACTGATAAGATTTCACAAACTACTCAACA
CAATGAAGCAAAATGGCTGAAGAAACATAAAGTCAAAGCTTTCCATCAAA
TTGTTCAAAACACAACATTACGCGGTGGTGTCAACAGCATGTTACAGACA
CTCGGTCTCGGTAAATTACGACCAAACACTCTCCTCCTTGGTTACATGAA
CTGCTGGCAAAACGCCGATAGCTCTAAAGTCGATGAATTCTACAATATGC
TTCACGACGCGTTCGACTTGAAATACGGCGTTGGTATTTTACGTCTTCAA
GACGGCTTCGACATCACGGATGGTATAGTTGATGACCAGATTGAGAACGG
CGTGGTAGATAACCATGAACCTGATTGGTATACTGAGGATTGGGACGAga
gtcaaaaacaacaaaaccctGACAACCAACAAGGAAGCGACAATTCAAGT
GACCCTGGCAAGGACGGCTCACGACTCAAAGAGAGCGAACTTCCCAACAT
CGTCATGGCTTTCGATAAGAAACGCAAAGGTTACATTGATGTTTGGTGGT
TGTACGATGACGGGGGTTTGACCATTCTTTTGCCACACTTATTGTCACTC
AGCACACACTGGCGTGGATGTAAATTAAGAATCTTTACCCCCGCTTCTGA
TAAGAAGATCAAAGCTAATCAAATCCGTATGGCAAACTTGTTAAAGAAAT
TCCGTATTGATTTCTCGAGCGTCGTTGAGTTCCGCGGTATCAATAAACAT
CCACGTGACGATAGCGTGACTCATTTTAAGCGCATGCGTGGTGGAGCTCA
TTTACCCCCTGATGGTGTATTGGATAAAAAGACATTACGCCAAATTCGAC
TTGGTGAGCTTTTACATGAACATTCATCTGAAGCCAAATTGATTGTCTTG
ACGCTTCCTATTCCAAAAAAATCGGTAGTGACGTCATTAATGTACATGAG
TTGGCTGGAAGTGTTGTCTGCTGATCTCCCTCCAATTATGATGGTACGTG
GAAACCAGACCAGTGTTCTAACCTTCTATTCTTGAGGGATGGTTTCTGTT
CACGAATCCATCAATTTATTAGCCACTTGACTAGACCACCTCCAGAGAGC
CTCGGGGACCATATCCCTTTAATCGTGGACGAAGGACAGGAAATTCGAAC
ATCTGCTCCTATAAACGAGAAAACAGTATGTCACTAGTAATCGTCATAGA
AGACAAAGCTGCAAGAACAGTTTTAAAAGTAGGGAAAGAAGGAAACAAAC
GGCTTTCTATGAAAACACATATTTTATAAGTTTGAATGTGAATAACTTTT
ACTGTTCAATTAGTTTCACTTTCGGATCtgaacagaacaattttcttAGG
CAAAGATTTTCAATCAAAGGTCAGAGTCCAACTTTTTAGAATCCAGTTCT
TTTTACACAGTGTGTGTTTATTTACCGAATTGACCAACAAAGTGCAAGGT
AACATTTACGACGCGGAGTGTGGTAATAACATAATCGATTTAACCCAATC
CCCGCAGGAAATTAAGTTCCTAATCGAAATCTACGACCTAAGCTTCGGTG
GTTTCACACCATAGATTTCCAACTTTTTTGCCCGTAGTTTCACAAATAGC
CCGCGAAAAATCATGTCATAGATCCGACAGGCTCGAGAGCAGTTTCagtt
ttctaaacatttttcaaaaaaaaaattattgacgAAAATATTGTATTAGT
GTCACTTTTGTATTTATGTAATGGTTATACgattttttatattaaaaata
ttttttattacattttatatTCCCAATTTACTTTTTGGTTTCAAAAACTC
TTTTTTGATCAATCTTTGTGACTGTATTATTATCAATAGGcctttcataa
attacgtcacgaacatcacttgcctcgtattcaaacaatttccatggtga
tcatGTCCTTTGagtcattaaatgattttttcatgaatagaaagtatttt
taataaaatccgctgggagttaatcaccatggcaataatttcaaaacgag
gcaagtgatgtttgtgacataatttatgaaaa Run BLAST on NCBI transcript from alignment at scaffold_361:1325276..1335176+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061930 ID=TCONS_00061930|Name=TCONS_00061930|organism=Clytia hemisphaerica|type=transcript|length=9901bp|location=Sequence derived from alignment at scaffold_361:1325276..1335176+ (Clytia hemisphaerica)
TAGAGAATAAAAATTCAACAGGGTTTTGAAATCGTATTTGCCTATTCAAA
ttcacttttgagtctttcccAAGATGTCAAGTGAAGACCTTTCAAATGGC
ACCGGCGTCGTGAATGGAGGCCTTGAGATTGACTCTATGGTGCCGAGTAG
CAAAATCGACGGTGTACCTCGATTCAGGATTTCGAAAACACCAGCtgcaa
atgacgtcacagataTGTTAGATGCCGCTTCCAAACAAAATGGAACGATG
CCGCCCTCAATCATGACACCTGGTATAGAAAAGGCGGATGATGCTGTTCA
AGAAACGCCCGCCTCACCAACCGAAAAGCAAGAGAAACATGTTCATCTAT
ACCTGCCGACAGACCATAATGACACATTGCAACACAACCGTACACATACC
AATACACAGACTATGGGCTATCTGACTCATGACGCTGTTCCCTTGTCTGT
CTTCTATCGCAACCAGGAATCGATGGAAAATATCGCTGGTGGTAAAAGAC
CGACATTAGATCAACTTCATAAGGGTGAAGGCCTTGAACATGCTAAGAAA
AGACATTGGGTAAGaatcgtttttgttttttgttgtttctttttAGAGTG
TCTTTTTAGTGTTGTTTTCAATCTGGACACGTGAGGTATACTCAGTTTCC
CTCTGCTTAAACCTGAAACCTTTACACTGCACGCCTCACAAGAATGCTTT
AATCAATCCAATGCAATTAACGAAAACATGCATTAAGCAttcttcactaa
ttggtcagtCAGTCAAAGCCAAACCGTAATACCATCTCAATATACATACC
ACTTAAAACAAAATCGGTCCCCTTTAAACAAAcatcaattaaaaagaaaa
tcactTCACTCAAGATGAGAAATATAAAGAGGTTAAGGAGATGATCGTCC
TTGCTTTACATAATCTTTACAAGCTTTAAATTATTTCAACGTTTGTGAAA
TATAATGCGCATGCGCAAAATGCGTCATACGGAAAATACCATCTCAAAAA
CTGACCGTAAAAAGGGATTTCATTTCCCACAAAATTTCAGAACTCGGGAC
TTTTATCATTATCCCTCCTTGTAATGGTATTCATAATTCTAGCGAGATTC
GTCTGCGGGAAAGTTGCAGGACTGTTACTGACATAAATTTCTTGGCGGAG
ATTTACTTCATTGAGCTTCAAGCCctaagggctagaggcgagactcgtGG
ATGGGAGataaaaccacttatttcccatctataACGCCCGCGcttagttt
ttacacaaacaccggattgagactaaaatctatcgctagatttcaaaaaa
atgtagtcctccaaaacaaaggaaccggtAGATGCAATCCGTCGTTATGA
TTAGGGGGGGGTTCTATGcacgttttggatgggaaataagtggcttcaat
ttctccaGGGTttaagtttcgcctctagccttTCAGGCTTGAAATTCAAT
GGTTTACTTCTTGTTCTCCATCCTACTGTAGTTTTTGTCACGTTTTCCTT
CGTAACCTCGCTTCTagatcaaaattattttcctcAATTTCAACAAGTGT
TGCATCATCGGGGAGGGGACGTTTATTAACGGAAAGGTTGGGATATATTA
AACACCATTTATAAGGGAAAGTCATTCAATCAAAATCAATCATTAAAATG
TTTCTAACAGCATACATTatcattaaaatcaaattaaatttctACAGACA
TTCTCAAAGCATTGATgccaaaataagatttgcagtGACTGACGTCATTT
CTCAAATACCTCGCTCAATCTATCGAACAAAGTTCAAACTAATAtttaat
ttgcaaaaaaagaccTTGTTCTATTTGTGGCTTTGTCAAACTGGTTTTTC
AGGTTTTGTCTTAAGCTTGTTTTAATTCAAGGTCTAAACACAATTTTCAT
CAATATGACAAAAAAGGTCAATGTCTCTATGATTTCTgttcaaagttgaa
ataaaaagtttgaattccaaaacaaagatttttatacccacttctcacag
acccggtggaattttttcagccagtggggataaaaataacggactgaatg
AAACTCGATAGGCATATTTTATATCTTatatggctggggattttaattcc
tttgttttcaagtcaggaaaattcagtgggggtgggaaaaatagtaaata
tctTGTAGtgaggatgggaaaaatagtacgatatttggccaatttttcta
gtgggtctgtgagaaaggggtaaatttttgacatgaaaatcGACTTATAG
TCTGTGTCAGTCTGTGCATAGCCTAGGCTAAGAAATTACGCAAATAATAT
GAAATTAATTCTAAACTGTCTTCCTTCCTATACGATTATTAGTGCGAAGA
GAGGTTTTCTGAAATTATACTGTCTCTGTATTTCGAAATATTGATCCTTT
GACCACCATTTTCTAAAATTGTACATTTAATCATTCATCGATTAGAGATT
CCTGACCTTGGTAGTTTCCTCAGTTTGATTGCAAATGATTTATTACAATA
ATTCATTAGattaaaaaatgacattaaattaaaaatgtaattaataattt
tttttaaaatatggGGCATGCTGTTGTGGTCGAAAATACAGACACCACAG
ACTGACCAAATATCCAGAAAGCTTGAAAGCAATATATCAACCAATGTTTT
AAAATCGAATCATTGGCATAGATAGGGGGAAAAATTGACTGATTTTTCAT
AAGGATAAAATATTATTCACTATTCATTAATTTAACAactattaatattt
ttattcgAATTCAACAAAcgtgtaaaaacatgaaaatcaaAGTCTCTACC
AGGAAATTCTCCTTTTGCAAGACACATGTCAATCAAATAAAGCctcaaat
attttaattcaaTTCTTAAATCTTTTAATTCAGTTAAAACTAAAATATGC
CTGAATATAATCGTCTTTGCTGGTCGCATTAAAACCAGAAATcttatcaa
aaattgaaattcctcAAAACATTTGTGTgccttttaaaataaaaatctga
aGAAATGTTCCTGATCAAAAAAACTGAAACATTATAgacattaaaatttt
ttaaacgataTTTCGGCCTTTACAGacctttattgtttaaaatagtatca
aggataaaattttccaacaaaaaaCACCCAAGTCCCTAATTTTTGGCAGT
ATCACTGAATTGTTTGTTCTATAATGAAAAGTCCTAATTGTTTCTCAATG
TATTTCAAACGATTCTTGTCTTTCCAGGATGCATCCAAAACGGTTGAACC
TGTCAAAGGGATCTCCGACATAGAAAGTACCGGTGAAAACAAGAAGGGTG
CTGTCAAGTTAGGGTGGATCAAGGGCGTATTATTTCCCACCCTATTGAAC
ATTTGGGGCGTAATTCTATTTCTACGAATGCCATGGATTGTAGCAAACGC
TGGGATTGGTTTATCTTCGGTTGTTGTGATCTTGGCAACTTGTGTGACCA
CCATTACTGCTCTCTCCATGTCTGCTATCTGCACCAATGGTGAAGTCAAA
GGAGGTATTAAGTTTATCTGGTTTTCCTCTTCCTTTTGGacatttgtgaa
atattggTGTTTGACTTTACTGACTTGATAATATCGTTTAAAGGTGTTCA
TTCGTTACTCGGATATTAATGAACTAGATTTTCACGCCGCGTCAATCTCG
AACTCAGTTCCTTTgcgattctgatagcgctcagtGCTCATAAaaggacg
atagcatcgtctagtctATCAGTAAAAATTCAAGAAGTGGTagaagtggc
tctgggtacgagattgacCTACTGACATAAACTATATGTATCTGAAGGAA
CCGAGAAGGAGTTTAAGCCTCACTCctttaaatgaaaaacaaaaatgatt
gacCTGCGAATTTACTATCTTGTTATCTGTAGGAGGTGCCTACTTTCTCA
TTTCCCGATCACTCGGTCCGGAATTCGGTGGCTCCATTGGTATCATCTTT
TCCATCGCAAACGCAGTAGCCGTCGCACTCTACTTGGTGGGTTTTGGTGA
AACTGTACAAGCTTTGATGGGGAAGGATGGAATCTTTATGGTGGATGTGA
AAAATGATGTTCGGATTATTGGTCTCATTGCTCTTGTTCTCTGCTTCATC
ATCACGCAAGTAAGTATTCTCtttgtttttggaattttttggaATCAAAC
CTCAAATAgcgaatattttcaaaatcacaTGCTCTTGTTCATAGTCATCT
ACTAATTATACTGGCTTTTAAATTCGCCTGATTCGGCCAAAGCTTTGTTT
TCGATGTTTTTCCTTGATATTCTTTAAATTTTCCACCCCTGATTTTCggt
gtcacaaaaacttttcgATGCGATTCAACACGTTCCTTTGACTTTACAAA
ACACATTCGCGAATGACCATTTCACGATCGAAAGCAAACATGAGCAATCA
GGATCACCGTGCTTAGATAACAACTTTCTATTGGTCTAAATATTTGCAGG
TTAACCAATGGGAAATCGTTATGGGGgagcaatcagtcctgattaccctt
GATTCATTTCGACCTAAAAATGAACCATCTGTAGTATTCGACTTTTGGTA
ACCTGTACAAACTTCCAGCCTCCGCCAAGAAAAGTTTCTCAGTAAATACG
TTCTAAAACTCGAAAATTTCTGCGTCTTTTTTTATCAAGCTGGATTCACC
ATTAGGAAAGCCGACTGTAAATTCGTTGTGCGCTTTGTTTTCGTTCCACT
TTTTTGACAAGATTTTATTGAATTCATAAATAGGTTTTAGAGAACGGTAA
CGGTAACTGTCGTGCATACTCGATAAGGAACTATCAGTAGCATATATGTC
TTATCGCCAAGAAAATGAGGTATAAGTTGTATTTTCTTTCTAAAGGTCGG
TCTTGATTGGGTCATCCACACACAATCCGGCCTGTTGGCGTTGTTGGGTG
CAGCCATCATCAGTGTGATTGCAGGAACAGCTTATCCGAACCCACAATCG
TCACGTGACACAATGGAACAATACGGACTACCCGGATATTCCGGTGAACT
ATTCAAAACGAACTTCGGTCCAGATTATGAGAACGGTGTTGGTTTTTTCG
ACGTCTTCTCCATCTTTTTCCCTGCTGCAACAGGAATCATGGCTGGAGCG
AACTTATCAGGTGATCTCAAAAATCCATCACAAGCCGTCCCATGGGGTAC
CCTTATTGCTATCGTAGTCACTTCCGCAGTGTACGTCTTGCTATGTTGGC
TCTTGGGCTCCTCAACCATGCGTTTTGCACAAGGCCCAATCTCTTTGATG
GCAAGTGGATTGAATGATACCCTTAACAACACCCTTAGCAACAGcacaac
gacaacgaccaccGTCACAACAACGCTGGCAAATGTCGAGGATTATGAGT
TCGGTGCGAGAAACGATTTACAGGTGAGAGCGCTATCAATGATCTAGTCA
CTGAGATTTAACTCCCCAACACTTCTTCTCTGGATACAATCAAAGCGATT
TGAACTTTGACTGATTCTACACAATCTTATTACAATAGCTCCACAAATCG
AACACTCATGGGAGACTAAAACTTGTTTGAGCTATTATATGTAAAGTTCG
AGTACTAGAAATATTGTTATAAGAGTTGATACATTGAAGCTATAGAGGTG
CGAGTTTCTACTGTATAAATTATCTATGTACTATTTACATTTTCATCATC
TTAACTTTCAGATCATCGAGAGAATCTCGTTATGGGGACCACTGGTTTTG
ATCGGAATCTTTGCAGCCACATTATCATCTGCACTTGCATCTCTTGTTAG
CGCTCCAAAAGTATTCCAAGCAGTCTCTAAAGACAAAATTTTTCCAGGGA
TCGAAATCTTCGCTAAAGGATATGGTCGCTCAAACGAACCGAGGAACGGC
TATTTCTTGACTTTAATCATTGCTGCAGGATTCATTGCTATCGGTGAACT
AAATGTCATTGCTCCAATCATCTCTAATTTCTTCTTGATGGCGTACGCCC
TTATCAATTATGCTGTGTAAGTTATTGCTTATTCTATCATTCCGTTTCTT
CCTTCCTTAACTACGAAAACCTTAGTTACTCTTTTCGAGCTTTCTTAGTA
AACTCATTGCCGAGAAATCACTAAAATATAATTAACTTTTGTAAATGCAG
TGGAAATTCGAATGcctccttaacttgaacaatTAGTCTCgtcctttcag
ttaacaatagAACAATACTTTATAAAGCTTTACTCAATAACTGGAACAAA
TTCGTGTTTTCCATGTGTTGCCCAGTTATGAAAAATTAACTGTACTCAAG
ACTATCCTTCTCTTCGAATAAACGAATGTAATACCAAAGGAGTTCCACCT
TGGAGTCTTTCAATGCAACAGTCCTCATTTAACCTCttctttctttgctt
tagttTTGCTTCCTCACTTTCCAAATCACCTGGCTGGCGTCCAGCCTTCA
AATATTACAACATGTGGATTTCATTTATTGGTTTCTTGCTGTGCATGGCT
ATCATGTTTATGATCAATTGGTGGGCCGCCCTCATCACCCTTCTCGCTGT
GGCGGGGTTGTACAAATGGGTTGATGTGCGAAAACCTGATGTAAGTATCA
GAAAAGGATATTTAATTCGGacctttataactcgaatgtctccttaactc
aaacaattATATGAGCCCTTCAGTTAATAATGTCTTATAACCCTTActca
ataactcgaacaaaATTTGTATTCCCTTTACGGGTTAGGGAGACTCTATT
GCGTGAGAAAAGGATTTTTCTAATTGTCGATATTGCAATCTTTATGGTAT
GTTTGATAAGAAGCTTGACAAAATGGTCTATAATGGGTCTTTTAAACTAC
TAGAACCTGACACTGATAAATCAACAATAGCCGTAAACTAACAATGTAAA
TTCTATTACTTAGATCAATTGGGGCTCGTCAGGGCAGGCTCATACATTCT
TGAAAGCATTACGTTTCACGAGACGTTTAGAAGAAATCGAGGATCATGTC
AAGAACTTCCGCATCCAATGTTTATGTTTGACCGGTCAACCTTCCCTCCG
TCCAAATCTCGTCCATTTTGCTTCACATATTACTAAACACTTGGGAATGT
TAGTCTGTGGTGAAGTTGTCATCACTGATAAGATTTCACAAACTACTCAA
CACAATGAAGCAAAATGGCTGAAGAAACATAAAGTCAAAGCTTTCCATCA
AATTGTTCAAAGTAAGACTATATTATAGGTTTTGTTAACTCCCGCAGTAC
TGTTAGAAACTGAAATTTAATTAAGGATTCTTTCAAAATCATGGTACGTC
AACTTCAAATAtcttagcgggggggggggNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNtggggggggggggggtacttaggcaaatggagggtacggta
tgtgccgcccttaagggtaccttttttgtgtcgaaaaaataggaaaattt
caactttttatccCCTGAAAGatggaaatttggtcaaaattggccaaatt
tgtccctcgctaagggtcgtaaaattccctaaattttcctttgttttttc
ctttttagtcccggtaagggtccaaagttcgaaagtcgggcggcaccccc
cgtcagctcacaaccctagtaccccccgggtaTCTTAGCAAGCTCCTAGA
TGACACTTGTGATTCTGTAATACACTGACTACTTACTTTAATGAGTGATT
ACTTAGATAGCTACTTAATTAGGTCACTCAGTAATAAATTAACCTTCGTT
ACTCCCCCCAGACACAACATTACGCGGTGGTGTCAACAGCATGTTACAGA
CACTCGGTCTCGGTAAATTACGACCAAACACTCTCCTCCTTGGTTACATG
AACTGCTGGCAAAACGCCGATAGCTCTAAAGTCGATGAATTCTACAATAT
GCTTCACGACGCGTTCGACTTGAAATACGGCGTTGGTATTTTACGTCTTC
AAGACGGCTTCGACATCACGGATGGTATAGTTGATGACCAGATTGAGAAC
GGCGTGGTAGATAACCATGAACCTGATTGGTATACTGAGGATTGGGACGA
gagtcaaaaacaacaaaaccctGACAACCAACAAGGTGAGTGCAACAACA
TTTCAAGAAACTCCATAATGTGCATAATGTTCAATGAAAATTTTACCACA
GTGTAGTGAGCGATTTGATAACGAGTTTCACTTGTCTTACAAGACCCCCA
CTTTCAGAACTCTTTCTTTTCCAACCACACAAGCATTTCCTATTAGGCCT
TTTAAACATTGTATGATATGAGTCATGAAATTGTTCTTCTCTCCATTCTC
AGGAAGCGACAATTCAAGTGACCCTGGCAAGGACGGCTCACGACTCAAAG
AGAGCGAACTTCCCAACATCGTCATGGCTTTCGATAAGAAACGCAAAGGT
TACATTGATGTTTGGTGGTTGTACGATGACGGGGGTTTGACCATTCTTTT
GCCACACTTATTGTCACTCAGCACACACTGGCGTGGATGTAAATTAAGAA
TCTTTACCCCCGCTTCTGATAAGAAGATCAAAGCTAATCAAATCCGTATG
GCAAACTTGTTAAAGAAATTCCGTATTGATTTCTCGAGCGTCGTTGAGTT
CCGCGGTATCAATAAACATCCACGTGACGATAGCGTGACTCATTTTAAGC
GCATGCGTGGTGGAGCTCATTTACCCCCTGATGGTGTATTGGATAAAAAG
ACATTACGCCAAATTCGACTTGGTGAGCTTTTACATGAACATTCATCTGA
AGCCAAATTGATTGTCTTGACGCTTCCTATTCCAAAAAAATCGGTAGTGA
CGTCATTAATGTACATGAGTTGGCTGGAAGTGTTGTCTGCTGATCTCCCT
CCAATTATGATGGTACGTGGAAACCAGACCAGTGTTCTAACCTTCTATTC
TTGAGGGATGGTTTCTGTTCACGAATCCATCAATTTATTAGCCACTTGAC
TAGACCACCTCCAGAGAGCCTCGGGGACCATATCCCTTTAATCGTGGACG
AAGGACAGGAAATTCGAACATCTGCTCCTATAAACGAGAAAACAGTATGT
CACTAGTAATCGTCATAGAAGACAAAGCTGCAAGAACAGTTTTAAAAGTA
GGGAAAGAAGGAAACAAACGGCTTTCTATGAAAACACATATTTTATAAGT
TTGAATGTGAATAACTTTTACTGTTCAATTAGTTTCACTTTCGGATCtga
acagaacaattttcttAGGCAAAGATTTTCAATCAAAGGTCAGAGTCCAA
CTTTTTAGAATCCAGTTCTTTTTACACAGTGTGTGTTTATTTACCGAATT
GACCAACAAAGTGCAAGGTAACATTTACGACGCGGAGTGTGGTAATAACA
TAATCGATTTAACCCAATCCCCGCAGGAAATTAAGTTCCTAATCGAAATC
TACGACCTAAGCTTCGGTGGTTTCACACCATAGATTTCCAACTTTTTTGC
CCGTAGTTTCACAAATAGCCCGCGAAAAATCATGTCATAGATCCGACAGG
CTCGAGAGCAGTTTCagttttctaaacatttttcaaaaaaaaaattattg
acgAAAATATTGTATTAGTGTCACTTTTGTATTTATGTAATGGTTATACg
attttttatattaaaaatattttttattacattttatatTCCCAATTTAC
TTTTTGGTTTCAAAAACTCTTTTTTGATCAATCTTTGTGACTGTATTATT
ATCAATAGGcctttcataaattacgtcacgaacatcacttgcctcgtatt
caaacaatttccatggtgatcatGTCCTTTGagtcattaaatgatttttt
catgaatagaaagtatttttaataaaatccgctgggagttaatcaccatg
gcaataatttcaaaacgaggcaagtgatgtttgtgacataatttatgaaa
a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061930-exon-scaffold_361-1491911889:1325276..1325834 | TCONS_00061930-exon-scaffold_361-1491911889:1325276..1325834 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1325276..1325834 | TCONS_00061930-exon-scaffold_361-1510915933:1325276..1325834 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1325276..1325834 | TCONS_00061930-exon-scaffold_361-1575043694:1325276..1325834 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1491911889:1328503..1329384 | TCONS_00061930-exon-scaffold_361-1491911889:1328503..1329384 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1328503..1329384 | TCONS_00061930-exon-scaffold_361-1510915933:1328503..1329384 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1328503..1329384 | TCONS_00061930-exon-scaffold_361-1575043694:1328503..1329384 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1491911889:1330121..1330648 | TCONS_00061930-exon-scaffold_361-1491911889:1330121..1330648 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1330121..1330648 | TCONS_00061930-exon-scaffold_361-1510915933:1330121..1330648 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1330121..1330648 | TCONS_00061930-exon-scaffold_361-1575043694:1330121..1330648 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1491911889:1330937..1331241 | TCONS_00061930-exon-scaffold_361-1491911889:1330937..1331241 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1330937..1331241 | TCONS_00061930-exon-scaffold_361-1510915933:1330937..1331241 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1330937..1331241 | TCONS_00061930-exon-scaffold_361-1575043694:1330937..1331241 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1491911889:1331629..1331815 | TCONS_00061930-exon-scaffold_361-1491911889:1331629..1331815 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1331629..1331815 | TCONS_00061930-exon-scaffold_361-1510915933:1331629..1331815 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1331629..1331815 | TCONS_00061930-exon-scaffold_361-1575043694:1331629..1331815 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1491911889:1332139..1332436 | TCONS_00061930-exon-scaffold_361-1491911889:1332139..1332436 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1332139..1332436 | TCONS_00061930-exon-scaffold_361-1510915933:1332139..1332436 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1332139..1332436 | TCONS_00061930-exon-scaffold_361-1575043694:1332139..1332436 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1491911889:1333037..1333360 | TCONS_00061930-exon-scaffold_361-1491911889:1333037..1333360 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1333037..1333360 | TCONS_00061930-exon-scaffold_361-1510915933:1333037..1333360 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1333037..1333360 | TCONS_00061930-exon-scaffold_361-1575043694:1333037..1333360 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1491911889:1333578..1335176 | TCONS_00061930-exon-scaffold_361-1491911889:1333578..1335176 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1510915933:1333578..1335176 | TCONS_00061930-exon-scaffold_361-1510915933:1333578..1335176 | Clytia hemisphaerica | exon |
| TCONS_00061930-exon-scaffold_361-1575043694:1333578..1335176 | TCONS_00061930-exon-scaffold_361-1575043694:1333578..1335176 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:1325276..1335176 + |
Blast
BLAST of TCONS_00061930 vs. Swiss-Prot (Human)
Match: S12A2 (Solute carrier family 12 member 2 OS=Homo sapiens GN=SLC12A2 PE=1 SV=1) HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0 Identity = 400/873 (45.82%), Postives = 545/873 (62.43%), Query Frame = 2
Query: 1214 GGAYFLISRSLGPEXXXXXXXXXXXANAVAVALYLVGFGETVQALMGKDGIFMVDVKNDVRIIGLIALVLCFIITQVGLDWVIHTQXXXXXXXXXXXXXXXXXTAYPNPQSSRDTMEQYGLPGYSGELFKTNFGPDYENGVGFFDVFSIFFPAATGIMAGANLSGDLKNPSQAVPWGTLIAIVVTSAVYVLLCWLLGSSTMRFAQGPISLMASGXXXXXXXXXXXXXXXXXXXXXXXANVEDYEFGARNDLQIIERISLWGPLVLIGIFXXXXXXXXXXXXXXPKVFQAVSKDKIFPGIEIFAKGYGRSNEPRNGYFLTLIIAAGFIAIGELNVIAPIISNFFLMAYALINYAVFASSLSKSPGWRPAFKYYNMWISFIGFLLCMAIMFMINWWAALITLLAVAGLYKWVDVRKPDINWGSSGQAHTFLKALRFTRRLEEIEDHVKNFRIQCLCLTGQPSLRPNLVHFASHITKHLGMLVCGEVVITD-----KISQTTQHNEAKWLKKHKVKAFHQIVQNTTLRGGVNSMLQTLGLGKLRPNTLLLGYMNCWQNADSSKVDEFYNMLHDAFDLKYGVGILRLQDGFDIT-----DGIVDDQIEN-GVVDNHEPDWYTE--DWDESQK-QQNPDNQQGSDNSSDPGKDGSRLKESELPNIVM------------AFDKKR-KGYIDVWWLYDDGGXXXXXXXXXXXXXXWRGCKLRIFTPASDKKIKANQIRMANLLKKFRIDFSSVVEFRGINKHPRDDSVTHFKRMRGGAHLPPDG----VLDK-------------------KTLRQIRLGELLHEHSSEAKLIVLTLPIPKKSVVTSLMYMSWLEVLSADLPPIMMVRGNQTSVLTFYS 3682
GGAY+LISRSLGPEFGG+IG+IF+ ANAVAVA+Y+VGF ETV L+ + I M+D ND+RIIG I +V+ I+ G++W Q LL +L AI + GT P ++ + G GY E+F NFGPD+ FF VF+IFFPAATGI+AGAN+SGDL +P A+P GTL+AI++T+ VYV + +GS +R A G ++ T S + +G N+ Q++ +S + PL+ GIF+ATLSSALASLVSAPK+FQA+ KD I+P ++FAKGYG++NEP GY LT +IA GFI I ELNVIAPIISNFFL +YALIN++VF +SL+KSPGWRPAFKYYNMWIS +G +LC +MF+INWWAAL+T + V GLY +V +KPD+NWGSS QA T+L AL+ + RL +EDHVKNFR QCL +TG P+ RP L+H TK++G+++CG V + K Q +WL K+K+KAF+ V LR G ++Q GLG+++PNTL+LG+ W AD VD + N+ HDAFD++YGV ++RL++G DI+ + ++ Q ++ G D Y++ D D S+ + P + + KES+ P + + F KK+ K IDVWWL+DDGGLT+L+P+LL+ W+ CK+R+F +I ++ MA LL KFRIDFS ++ IN P+ +++ F+ + L D + DK KT RQIRL ELL EHSS A +IV++LP+ +K V+S +YM+WLE LS DLPPI++VRGN SVLTFYS
Sbjct: 350 GGAYYLISRSLGPEFGGAIGLIFAFANAVAVAMYVVGFAETVVELLKEHSILMIDEINDIRIIGAITVVILLGISVAGMEWEAKAQIVLLVILLLAIGDFVIGTFIP-----LESKKPKGFFGYKSEIFNENFGPDFREEETFFSVFAIFFPAATGILAGANISGDLADPQSAIPKGTLLAILITTLVYVGIAVSVGSCVVRDATGNVN-----DTIVTELTNCTSAACKLNFDFSSCESSPCSYGLMNNFQVMSMVSGFTPLISAGIFSATLSSALASLVSAPKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAELNVIAPIISNFFLASYALINFSVFHASLAKSPGWRPAFKYYNMWISLLGAILCCIVMFVINWWAALLTYVIVLGLYIYVTYKKPDVNWGSSTQALTYLNALQHSIRLSGVEDHVKNFRPQCLVMTGAPNSRPALLHLVHDFTKNVGLMICGHVHMGPRRQAMKEMSIDQAKYQRWLIKNKMKAFYAPVHADDLREGAQYLMQAAGLGRMKPNTLVLGFKKDWLQADMRDVDMYINLFHDAFDIQYGVVVIRLKEGLDISHLQGQEELLSSQEKSPGTKDVVVSVEYSKKSDLDTSKPLSEKPITHKVEEEDGKTATQPLLKKESKGPIVPLNVADQKLLEASTQFQKKQGKNTIDVWWLFDDGGLTLLIPYLLTTKKKWKDCKIRVFIGGKINRIDHDRRAMATLLSKFRIDFSDIMVLGDINTKPKKENIIAFEEIIEPYRLHEDDKEQDIADKMKEDEPWRITDNELELYKTKTYRQIRLNELLKEHSSTANIIVMSLPVARKGAVSSALYMAWLEALSKDLPPILLVRGNHQSVLTFYS 1212 HSP 2 Score: 119.398 bits (298), Expect = 8.010e-27 Identity = 77/167 (46.11%), Postives = 100/167 (59.88%), Query Frame = 2
Query: 392 THTNT---QTMGYLTHDAVPLSVFYRNQESMENIAGGK--RPTLDQLH---KGEGLEHAKKRHWDASKTVEPVKGISDIESTGENKKGAVKLGWIKGVLFPTLLNIWGVILFLRMPWIVANAGIGLSSVVVILATCVTTITALSMSAICTNGEVKGGIKFIWFSSSF 868
THTNT +T G+ T DAVP YR+ + G K RP+L +LH + E E +++ T + V + T E+K G VK GWIKGVL +LNIWGV+LF+R+ WIV AGIGLS +V+++AT VTTIT LS SAI TNG V+GG + S S
Sbjct: 203 THTNTYYLRTFGHNTMDAVPRIDHYRHTAAQ---LGEKLLRPSLAELHDELEKEPFEDGFANGEESTPTRDAV-----VTYTAESK-GVVKFGWIKGVLVRCMLNIWGVMLFIRLSWIVGQAGIGLSVLVIMMATVVTTITGLSTSAIATNGFVRGGGAYYLISRSL 360
The following BLAST results are available for this feature:
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