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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062165 ID=TCONS_00062165|Name=TCONS_00062165|organism=Clytia hemisphaerica|type=transcript|length=1574bp
ATTTGCTTTGCATTCAGCTCAAAGTGACCCATGTCccattaaatgttttt
tcttttgcttcttATTTTACTTTGATTTGCCAACATGTACCCGTGTTATG
ATTTTTGATTCACTGTGATTCAtgtgttcttttatttttagtgtAGATCT
ATCTCAATAGAAATTCTAAAGATGTCTGACGGAGTCAAAGTCTTTGTTGG
AAACTTGCCTGATCGATGTCCAGAGAGCTCTCTCCAAGATCTTTTCTCTC
CATATGGAAAAATTAAGGGCATTATCATGGTTAAAACTTATGCTTTTGTC
CATTTTGAGTCAGAACGTGATGCAAAAAAAGCTGTTGATGATCTGCACAA
AACCAAACTACTGGGAAAAGAACTCACTGTTGAAATTGCCAAAAGTAAAC
AACCTCCCAAACGAGGTCATGGTGGTGCAGAAAAGCGACCAAAGAACTCT
GGATTAAGTTTAGGGTCAATTGGTGGCCCTCAAATGGGTGGCCCTCCTAT
GGGTGGAATGGGTCCAGGTGGTATTTTAGGGATTGGCCCTGGTGGGCCTG
GGGCAGGCTTACCAAATGCTGCTCTAGGGCTTCTCAATGCAGTTAATGCA
GTCAAAAACATTGCAGGTGCAGTCGGTCAAAATAATGATCAAAACTCCAT
CTTACCAATGCCAAATTCCAATCGTGACACTTCTCGTGATCGCGCTCCAC
CACCATCAGATGGTTATGTTATCTATGAGAGATTCTATGTTGATCGTGCA
CACCCACTCTTAAAAGGTCTTCCTGTCCCTGAACTTCCACGTGTTCAGGA
TGTCATTGCAAGTCGTGATTCCTTTCAAAAAGATCCATATGCTCAAGATG
TCTCCATTCGCGATGACCCATATGCTAGCAGTGCTAGTAATCGCAATGAT
GATTACGGAGCTGGCTACCAACAAACTCGCCGTGATGACACGTCCAATGT
CAGGGATGATTATTTTGCTCCACGTCGTGATGATTCTTTCCAAGCTAAAA
GAGAAAATGTTGATACCTCTTACAGAGAGAGAAGTCCAATGTGTAATAGA
AGAGACTACGATAGAGACTCACGAAACAGGTTATATGATGATCGTTATTA
AAGATGATCTCTGTCTGATTATACTACTTGCTTCCCTGGGGCACAAACAT
TGTCaaagatgatttcaatgaattccATTTACTAGCCATTCAACTTTTGA
CctgatgttttttatcaatTACTTTTTAGATCACAAATTAATATCTCATC
TTGTTTCTTTATTCTCATtgatcaaagaaatattttgtccaCAAACCATT
TTTCAAACCTCTTTGGCCATTTAACATAGTAACAGCAATGTGTGTGACTT
TTTTAATCTGTGTCTCATCAGTTATATGAGATAAACCAACTTGTTGTTTT
TATCATTTACTCCACTTTGTATATTTTACCATGTAGATTTTCTTTACTTG
agaaagtttttatttgttaaatttcTTGGTAGCTACTCGGCTTATCATAA
CTTCATTATCCCAACGGTGTATCTCATCAGTACAGAACTCCATTCAAAGG
GTCTGAAATAACAATAGGACTCAC Run BLAST on NCBI transcript from alignment at scaffold_362:185042..186615+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062165 ID=TCONS_00062165|Name=TCONS_00062165|organism=Clytia hemisphaerica|type=transcript|length=1574bp|location=Sequence derived from alignment at scaffold_362:185042..186615+ (Clytia hemisphaerica)
ATTTGCTTTGCATTCAGCTCAAAGTGACCCATGTCccattaaatgttttt
tcttttgcttcttATTTTACTTTGATTTGCCAACATGTACCCGTGTTATG
ATTTTTGATTCACTGTGATTCAtgtgttcttttatttttagtgtAGATCT
ATCTCAATAGAAATTCTAAAGATGTCTGACGGAGTCAAAGTCTTTGTTGG
AAACTTGCCTGATCGATGTCCAGAGAGCTCTCTCCAAGATCTTTTCTCTC
CATATGGAAAAATTAAGGGCATTATCATGGTTAAAACTTATGCTTTTGTC
CATTTTGAGTCAGAACGTGATGCAAAAAAAGCTGTTGATGATCTGCACAA
AACCAAACTACTGGGAAAAGAACTCACTGTTGAAATTGCCAAAAGTAAAC
AACCTCCCAAACGAGGTCATGGTGGTGCAGAAAAGCGACCAAAGAACTCT
GGATTAAGTTTAGGGTCAATTGGTGGCCCTCAAATGGGTGGCCCTCCTAT
GGGTGGAATGGGTCCAGGTGGTATTTTAGGGATTGGCCCTGGTGGGCCTG
GGGCAGGCTTACCAAATGCTGCTCTAGGGCTTCTCAATGCAGTTAATGCA
GTCAAAAACATTGCAGGTGCAGTCGGTCAAAATAATGATCAAAACTCCAT
CTTACCAATGCCAAATTCCAATCGTGACACTTCTCGTGATCGCGCTCCAC
CACCATCAGATGGTTATGTTATCTATGAGAGATTCTATGTTGATCGTGCA
CACCCACTCTTAAAAGGTCTTCCTGTCCCTGAACTTCCACGTGTTCAGGA
TGTCATTGCAAGTCGTGATTCCTTTCAAAAAGATCCATATGCTCAAGATG
TCTCCATTCGCGATGACCCATATGCTAGCAGTGCTAGTAATCGCAATGAT
GATTACGGAGCTGGCTACCAACAAACTCGCCGTGATGACACGTCCAATGT
CAGGGATGATTATTTTGCTCCACGTCGTGATGATTCTTTCCAAGCTAAAA
GAGAAAATGTTGATACCTCTTACAGAGAGAGAAGTCCAATGTGTAATAGA
AGAGACTACGATAGAGACTCACGAAACAGGTTATATGATGATCGTTATTA
AAGATGATCTCTGTCTGATTATACTACTTGCTTCCCTGGGGCACAAACAT
TGTCaaagatgatttcaatgaattccATTTACTAGCCATTCAACTTTTGA
CctgatgttttttatcaatTACTTTTTAGATCACAAATTAATATCTCATC
TTGTTTCTTTATTCTCATtgatcaaagaaatattttgtccaCAAACCATT
TTTCAAACCTCTTTGGCCATTTAACATAGTAACAGCAATGTGTGTGACTT
TTTTAATCTGTGTCTCATCAGTTATATGAGATAAACCAACTTGTTGTTTT
TATCATTTACTCCACTTTGTATATTTTACCATGTAGATTTTCTTTACTTG
agaaagtttttatttgttaaatttcTTGGTAGCTACTCGGCTTATCATAA
CTTCATTATCCCAACGGTGTATCTCATCAGTACAGAACTCCATTCAAAGG
GTCTGAAATAACAATAGGACTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062165-exon-scaffold_362-1491911889:185042..186615 | TCONS_00062165-exon-scaffold_362-1491911889:185042..186615 | Clytia hemisphaerica | exon |
| TCONS_00062165-exon-scaffold_362-1510915933:185042..186615 | TCONS_00062165-exon-scaffold_362-1510915933:185042..186615 | Clytia hemisphaerica | exon |
| TCONS_00062165-exon-scaffold_362-1575043694:185042..186615 | TCONS_00062165-exon-scaffold_362-1575043694:185042..186615 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_362 | supercontig | scaffold_362:185042..186615 + |
Blast
The following BLAST results are available for this feature:
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