TCONS_00062230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062230
Unique NameTCONS_00062230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2088

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062230 ID=TCONS_00062230|Name=TCONS_00062230|organism=Clytia hemisphaerica|type=transcript|length=2088bp
agaaaagattggttcgcttaaaaaaaataacttggtgaataattttgatg
agtttttaagattgtcaaCTATAAAAATAATCTATCGAACTTCGAGAATG
CATTGGTCTCAAGGCCTTGTGTGCCTGCTATTTGCCGTCTTGAGTTTCGG
CGTTCAAGAAACTTCAACACAGATGCAAATGGGAGGAGATATGAATAGAA
TACTTCCAGATTGGCCAAAGATTGGTGACAGAATCACACAACCCTTTCTC
GATCAATTGATGGTCAGTCAACTGTTGGAACAGAATCTGACTCTCGGATT
CTTCTTAAAAGGACTTAACGGACCACCAGGTCCTCCAGGACCACCAGGAC
CATCTGGAGAACCAGGAGCCCCAGGTTTACCCGGTGCACCAGGAGCCCCT
GGACACGTTGGTGAAGATGGTGCCCCTGGTCCAATGGGACCACCAGGCTT
ATCTGGAGGCCCTGGTATGCCCGGATACCCAGGAGAGAAAGGAGATCCAG
GACCATCAGGTTTACCTGGATCCGCCGGTCTGCCTGGTGCCCCTGGTCTA
CCTGGACCACAGGGATCAGCTGGAGATTCAGGACCTGAACCAATCAAACC
GGAGTTCACTGTTGCATGCGAAGGACAAAAACTTTGGATTCAGTGTCAAC
AATACGAATTGATCAAGATCAAAGAAGCATACTGGGGTCGTGAGGACCAC
GTTACCTGTTCTGATACACCGGCCGGTCTGAGCCGTGAAGTCTGTGACGC
CAACAGTGATAATGCCTTCACAAAGGTAGATGCACAATGCAAAGGTCAAC
AAAATTGTGAAGTTGTCGCCTCCAATATTTTCTTTGACGATAACAGTTGT
GGAAACGTttataaatatttgaaagtGAAATACGAATGCGAGGCTGACCA
GCAGAACAGCATGGACGTCTTGAAAGAAGGCGGTCGCCGACGACGAAAGA
AGAAGCGTGACACCAAAGAGAAGCGATCCTTCAGGGATTCATAAATAGAA
CTCTCTCACTTTCTCCTACAAAATGTCCATGCGCGcaaaactttctattt
ttttgacGAAAACAAAACTTCTGAAGACTTTTTTTACAGGACTTAATAGA
ACCAACTTTATGGTGTATCATCGAAACCATGGATcagcaaaatttatttt
ttgctcaaagcAGTATAAATATTATCGACGGTAGAGAAGTGTGGTGTAAT
ATTTAGATTAGGCCATATTACTTGCTATGTCTCCAAGTTATAGAGTTTAA
AAActaaacaatatatttttctatgAATTTTATATTCTATTTTGTTATGA
AAATACTGGGAACTATTCTATATGCATAAGCAAACGTTGCAATTCTTTAT
CATCTTCCTCGGCCAAAATTTACAGTAAATCAAGCATCTTCCTATTTGCG
GGAGAAAGCAATAAATACTAGTACAGTAGCTTAAAGGATACTGTAGATTG
TCCTACATCTTAGTTATACCCTTCTTGTTTGGCTAAAGTCGCAAAATTTC
ATCAACAAAAACAGAAATCGGAATTTCAGGATTTCATAGTCGCTGTTTAT
TGCGATGAGATGGTGGTCAGAGGATAAGGAAATTTTAGACTGGGCAATTT
AAAGTATCGTTTTTCAATTGTACATATCTTCAAAACTGAAACCCAAAACA
ATAAATTTGACAAACACAAGTTTCTTTACAGATATGATAGTTTACaaatt
tttatagcaaaatttgatataatatttttttacatatttttttgaaaaat
gtgactTTGAGTGCCCTCGTTATCCCTTATGAGTTCAGAATGGACGGACT
AAAAACCATACGGGGTACACACCCAAAGAATATGCAtttataaagtaaaa
atttgatatttttataacTGATAAATTATTattccatatttacaaaaaaa
atatactcTTGTATTTTATgaagttatatttttttaaatttttttggaat
tttgtgtttttgttgtaaaattttgtgCAGTGACATCCCTTACTATATag
atttatataaaaaagagtgtagaaattaatttggtaaaatttgaaattaa
tccCGTCTACTCCTTTTggaattgacaaaaaatctcAG
Run BLAST on NCBI

protein sequence of TCONS_00062230-protein

>TCONS_00062230-protein ID=TCONS_00062230-protein|Name=TCONS_00062230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
EKIGSLKKNNLVNNFDEFLRLSTIKIIYRTSRMHWSQGLVCLLFAVLSFG
VQETSTQMQMGGDMNRILPDWPKIGDRITQPFLDQLMVSQLLEQNLTLGF
FLKGLNGPPGPPGPPGPSGEPGAPGLPGAPGAPGHVGEDGAPGPMGPPGL
SGGPGMPGYPGEKGDPGPSGLPGSAGLPGAPGLPGPQGSAGDSGPEPIKP
EFTVACEGQKLWIQCQQYELIKIKEAYWGREDHVTCSDTPAGLSREVCDA
NSDNAFTKVDAQCKGQQNCEVVASNIFFDDNSCGNVYKYLKVKYECEADQ
QNSMDVLKEGGRRRRKKKRDTKEKRSFRDS
Run BLAST on NCBI

transcript from alignment at scaffold_362:228433..234786-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062230 ID=TCONS_00062230|Name=TCONS_00062230|organism=Clytia hemisphaerica|type=transcript|length=6354bp|location=Sequence derived from alignment at scaffold_362:228433..234786- (Clytia hemisphaerica)
AGAAAAGATTGGTTCGCTTAAAAAAAATAACTTGGTGAATAATTTTGATG
AGTTTTTAAGATTGTCAACTATAAAAATAATCTATCGAACTTCGAGGTGA
GCTTTGTTTTGAAGTTTGTTTTGAAATTTTTTTATTGTCGTTAATAAACA
ATAGCAATCAAAACAAAGGAAGACAAAATAGAGCTGAATTATTCCAATTC
ATTAACGGGATGATCTAATCAATAGAGCCACCTGCTTTCAATAGAATTCT
ATTGTTAAATCATTCGAATTTTTCTCAATCGAATTCTGTCAGTGGTGAAA
ATGAAAACAAGCTATTAGCGTTTACTGTTGAATTCATGCTATGCTTCCAT
TATTGAAGAAAAAAACTTTAATTTTTTGAATGCATGCGAAGGAGGCATAG
ACAGACATAGCCCAAAATAATTAACATCGCTAATTAATTTTTTGGGGCTT
TTGGTTTTGTCTCTTTTGACATAACTTGTTTTAATATCTTCTTGTGTATA
TATTGTATAGAAAATTAAAATTTATAAAGTAAGTTGGCATTTATTTTAAC
TTTGATGGTTGTATTGATGGATTTTTTTTTGGGATATTATTTTTCTCATT
TGATCGGATTCGATTGCCAATGTTTTTGTTACTTTCGATGATTTGGTTTC
CCAGCTCATAGTTAAAAGATTATTATAAATTTATTACCTGTCCTGCTTTA
ATCATTTTGGCTTCTGGTAGAATTGTTTTTATCATTGGGTCAAACTCCCG
TCAAACTTTAATAAAATTTATATTGAATACAAACTTCAACTTCAACCTCT
TCTAGCCTAAATATTCCTTGAAATACATAACAATCAAGATATTTCACCCC
CTGTAAAATTATATTTTCTCAATGCCATGGCTTTTTTATGATGAAGGATT
CAGGTTCTATAATTTTGCATAAAAATAACATTGTTTTTTTCTCGTACCTT
AGAATGCATTGGTCTCAAGGCCTTGTGTGCCTGCTATTTGCCGTCTTGAG
TTTCGGCGTTCAAGAAACTGTAAGTAAATTCATTCTTAAAAATTGTTTCT
TTTAAAAACTTTTCTTCGTCTTTATTTTCGATATCCTAGGTAGATACAAA
ACTCAATATTTTCCATTTCCAAAAACCATTTTTATCTTCAAGAAGCAATC
TTTTTCTTTTTGAAAACTTATCTTTTATCTCCAGAAAGGGTCTTTCATTT
TTGTATCTACTTAAGAAAACCACGGTTAAGACACGCTAATTTGATACTCA
TTGAATTACTAAAGTCCTAAAGTGAAATTAGTCTATGGTATTGTACCGAA
TTCTTTTGGACCCAGACCTTTTTTCCATGAGATTAAGGTTGACAAGACTA
GGGTGTGTAAATTAACTTTTTTACATTTACAACATAACAAACACATACCT
TTTACTCATAACATAACATAACATCACTTGACAATATCTTTACACATCTA
CCATCACATTACATTCACTGACCACCATTGAGATTTGACCATGACACCAA
CATTGAGGTATTTACAAAACAGCACCTGAAAAATAAGATACACAGATCTG
TAAATTCTCTTTGTGGCTTTTCTTTTTTGTTTTTAACGGCTTTAGACACT
TATAAAACAAGATACTCTATATGTATATAGATTTTATTGGGGAAATTTGG
CAGATTGCGTATTTGCGACCTTTGGTTTATAAACTCCAGTGAACCGAAAC
TTAATTAGTCGTTAAGATAGCAAGGGTTAAAAAACACGGAACATAGAATT
TACATAGAACAGACAGAGAGACAGAATAACAGTATTTAAACAAGATAACA
GTATTTGAACATAACAAAAAAAAACAGACCAGACCAGACCAGACGATATA
CGACCGTTCTCCGAAAATGGAGAAACTAAATCACAAACGAGAAGACAAGA
CAAGGAACTGGAACAAACCTACGTACAAGAAAAGAAAAACTTTACTCAAC
AAAGACATCGACAACCAAAATGATATCTGATTATCGATAAACAATGCCAA
AATCTTATCCATTATAGCAAGAACAACAAGCCAGAATGTTACCAGATTGG
CCAAAGATTGGTGACAGAATCACGCAGCCTTTTCTTGATCAACTGATGGT
CAGTCAACTGTTGGAACAGAATCTGACACTCGGATTCTTCTTGAAAGGGC
TAAATGGACCACCAGGTCCTCCTGGTCCACCTGGTTCCCCTGGAGAACCT
GGTCCTCCAGGTTTACCCGGTGCACCAGGAGCCCCTGGACACGTTGGTGA
AGATGGTGCTCCTGGTCCAATGGGTCCTCCTGGACCATTGGGTTCTGCTG
GTGTCCCCGGTTTCCCTGGAGAGAAAGGAGATCCAGGTGCAACTGGTTTG
CCTGGATCTGCAGGTCTTCCGGGTGCTCCTGGTTTACCTGGTCCTGAAGG
ATTGGTTGCAGAAACCCGTGATAATGTTGCAGTACAACTGAAACCAGAGG
TGAATACTTTGTAGATTCTTACCCTAATTTAAAAGAATTTCATTTTGAAG
TCATTAATCAGATTTATCTTGCATTTTTATCTGGCATCTTTTAGATTTTG
ATTTCATACAATTATTTTGATAAACTTATACGCCAAAGTTCTAGTTTTGA
CTTGATTGAGGGCAAAATTGATGATAACTCTTGGATTCATTATACATGAA
GAATGATGGAAGTATATTTTGATGTATCTTTTTCTTTTCCAGAACTTCAC
AGAGAAATGCGAAGGTGAACGCTTGCTTATTGATTGCAAAACATATAACC
ATATCCAAGTCAAAGATGTATACTGGGGTCGAGATGATACTTCCACCTGT
CAAAATGCACCAAACGGTTTAGTAGCTGATAAATTTTGTGATGGAAATCG
TGAAAATGCCAAACAAAAAGTTGCGGGACAATGTAAAGGCGAACAGGCTT
GTGAAGTTGTCGCCTCCAATATTTTCTTTGATGATAACAGTTGTGGAAAT
ATATTCAAAGTGTTGAAAATTTGGTATGAATGTGTACCCGACTCCAGTCC
GGGCACGGAAGATACGTACGGATCACGGCGTAAACGGAAGCGTGCAACCA
AGGATAAAAGATCTTTTCGAGATAGTTAGATTAAAATCAATGACCCAGAA
ATTCTAATACAAAAAAACCATCTAGTCAGTAAAATGAAAAAGTTTCATGT
GCAGAGAATGTATTATAGACAATTAACTAAATAATCTGCGGATGAGATTT
TGATCAAATTATTGACTTGCTGACAACGTTGGTGTTTCTCAGTTATTGCC
AGAGAAGAGCAGAAAGGTGACGACATTGCTGAGAGAGTAAGACAAGAAAG
AAAGACGAGCTCCCACGAATTTTTTATAACAATAAAGCTTTTTCACATAA
GACCTGTATATATAATATTTTAGTTTAACAATTTATGAAATGATTCCAAC
CTTAGGTGTATGGTGTTCTTAACAGATAATTCTAGAGGGCAGAGTGTCTT
GTTTTATAAGGTCAACTTCCTAAATGCAAAGTTGATTGAAACCAATTTTT
GTAATATCAAATTAACAGTTAAGCCATAAACATCTTCTTTATTTTCAAGA
ATTTTAGAGTTTTTTAAGGTCATGGTAGAATGTCAAGACCACCATCGATC
GCATCAAATAAAAGGGCGTAACCACCCTCCACCCTCCTCTCAATCATCAA
CACTCAATCACATCCACCATTCATACACCACAATCATTTATTCACTCAAA
ATCATAAGTCTTTTAGATAATCCACTCACACATTAAATCATAGTCATTTT
ATCTAGTTGTTAGAGAATTTTAGACCATTATATTTTTTTGTGTTCCTATT
TTTTTTTGTTTTCAAGACCTCATATATTTGTAATTTCAAATTTGACATAA
AACTAAATTATCAATGACAAACAATGAAAATATCTTTCCAACTAATTTAT
TTTTGAGGAATTAACAACTTTAACAAGGACTTAGAATGCTTCTCCTGTAT
TATTTCTAACTATATTTCTATTGTAGTAGTGGATAAATAAATGTATAAAC
TGAATTCAATCAAGAATCGAACGAAATTAATTATTTTCTCCTTTTCTTTA
CTTTTCAAAAACAACAGTCAACACAGATGCAAATGGGAGGAGATATGAAT
AGAATACTTCCAGATTGGCCAAAGATTGGTGACAGAATCACACAACCCTT
TCTCGATCAATTGATGGTCAGTCAACTGTTGGAACAGAATCTGACTCTCG
GATTCTTCTTAAAAGGACTTAACGGACCACCAGGTCCTCCAGGACCACCA
GGACCATCTGGAGAACCAGGAGCCCCAGGTTTACCCGGTGCACCAGGAGC
CCCTGGACACGTTGGTGAAGATGGTGCCCCTGGTCCAATGGGACCACCAG
GCTTATCTGGAGGCCCTGGTATGCCCGGATACCCAGGAGAGAAAGGAGAT
CCAGGACCATCAGGTTTACCTGGATCCGCCGGTCTGCCTGGTGCCCCTGG
TCTACCTGGACCACAGGGATCAGCTGGAGATTCAGGACCTGAACCAATCA
AACCGGTGAGTAAGAAAAAAACGTTCTTTGTCAACATTCTTCGATGAAAA
CTTTTACCGCCTTTAAACAGGATGTCGACCAGGATTGTATTTTGGCTATG
GAGATATTAGATTTAAGGTTAAAACNACCTGAACCAATCAAACCGGTGAG
TAAGAAAAAAACGTTCTTTGTCAACATTCTTCGATGAAAACTTTTACCGC
CTTTAAACAGGATGTCGACCAGGATTGTATTTTGGCTATGGAGATTTTAC
AATCTTGCACTAATCGATCTAGCATTTCAGACATTTCGTTTTCTATTTTT
AACTAAAGAAACAATTAGACATACTGTAACCAAAATTCTAGCATTTTCTT
TTCAAACAACTTTTCAGGAGTTCACTGTTGCATGCGAAGGACAAAAACTT
TGGATTCAGTGTCAACAATACGAATTGATCAAGATCAAAGAAGCATACTG
GGGTCGTGAGGACCACGTTACCTGTTCTGATACACCGGCCGGTCTGAGCC
GTGAAGTCTGTGACGCCAACAGTGATAATGCCTTCACAAAGGTAGATGCA
CAATGCAAAGGTCAACAAAATTGTGAAGTTGTCGCCTCCAATATTTTCTT
TGACGATAACAGTTGTGGAAACGTTTATAAATATTTGAAAGTGAAATACG
AATGCGAGGCTGACCAGCAGAACAGCATGGACGTCTTGAAAGAAGGCGGT
CGCCGACGACGAAAGAAGAAGCGTGACACCAAAGAGAAGCGATCCTTCAG
GGATTCATAAATAGAACTCTCTCACTTTCTCCTACAAAATGTCCATGCGC
GCAAAACTTTCTATTTTTTTGACGAAAACAAAACTTCTGAAGACTTTTTT
TACAGGACTTAATAGAACCAACTTTATGGTGTATCATCGAAACCATGGAT
CAGCAAAATTTATTTTTTGCTCAAAGCAGTATAAATATTATCGACGGTAG
AGAAGTGTGGTGTAATATTTAGATTAGGCCATATTACTTGCTATGTCTCC
AAGTTATAGAGTTTAAAAACTAAACAATATATTTTTCTATGAATTTTATA
TTCTATTTTGTTATGAAAATACTGGGAACTATTCTATATGCATAAGCAAA
CGTTGCAATTCTTTATCATCTTCCTCGGCCAAAATTTACAGTAAATCAAG
CATCTTCCTATTTGCGGGAGAAAGCAATAAATACTAGTACAGTAGCTTAA
AGGATACTGTAGATTGTCCTACATCTTAGTTATACCCTTCTTGTTTGGCT
AAAGTCGCAAAATTTCATCAACAAAAACAGAAATCGGAATTTCAGGATTT
CATAGTCGCTGTTTATTGCGATGAGATGGTGGTCAGAGGATAAGGAAATT
TTAGACTGGGCAATTTAAAGTATCGTTTTTCAATTGTACATATCTTCAAA
ACTGAAACCCAAAACAATAAATTTGACAAACACAAGTTTCTTTACAGATA
TGATAGTTTACAAATTTTTATAGCAAAATTTGATATAATATTTTTTTACA
TATTTTTTTGAAAAATGTGACTTTGAGTGCCCTCGTTATCCCTTATGAGT
TCAGAATGGACGGACTAAAAACCATACGGGGTACACACCCAAAGAATATG
CATTTATAAAGTAAAAATTTGATATTTTTATAACTGATAAATTATTATTC
CATATTTACAAAAAAAATATACTCTTGTATTTTATGAAGTTATATTTTTT
TAAATTTTTTTGGAATTTTGTGTTTTTGTTGTAAAATTTTGTGCAGTGAC
ATCCCTTACTATATAGATTTATATAAAAAAGAGTGTAGAAATTAATTTGG
TAAAATTTGAAATTAATCCCGTCTACTCCTTTTGGAATTGACAAAAAATC
TCAG

Coding sequence (CDS) from alignment at scaffold_362:228433..234786-

>TCONS_00062230 ID=TCONS_00062230|Name=TCONS_00062230|organism=Clytia hemisphaerica|type=CDS|length=4965bp|location=Sequence derived from alignment at scaffold_362:228433..234786- (Clytia hemisphaerica)
GAGTTCACTGTTGCATGCGAAGGACAAAAACTTTGGATTCAGTGTCAACA
ATACGAATTGATCAAGATCAAAGAAGCATACTGGGGTCGTGAGGACCACG
TTACCTGTTCTGATACACCGGCCGGTCTGAGCCGTGAAGTCTGTGACGCC
AACAGTGATAATGCCTTCACAAAGGTAGATGCACAATGCAAAGGTCAACA
AAATTGTGAAGTTGTCGCCTCCAATATTTTCTTTGACGATAACAGTTGTG
GAAACGTTTATAAATATTTGAAAGTGAAATACGAATGCGAGGCTGACCAG
CAGAACAGCATGGACGTCTTGAAAGAAGGCGGTCGCCGACGACGAAAGAA
GAAGCGTGACACCAAAGAGAAGCGATCCTTCAGGGATTCATAACTGAACC
AATCAAACCGTCAACACAGATGCAAATGGGAGGAGATATGAATAGAATAC
TTCCAGATTGGCCAAAGATTGGTGACAGAATCACACAACCCTTTCTCGAT
CAATTGATGGTCAGTCAACTGTTGGAACAGAATCTGACTCTCGGATTCTT
CTTAAAAGGACTTAACGGACCACCAGGTCCTCCAGGACCACCAGGACCAT
CTGGAGAACCAGGAGCCCCAGGTTTACCCGGTGCACCAGGAGCCCCTGGA
CACGTTGGTGAAGATGGTGCCCCTGGTCCAATGGGACCACCAGGCTTATC
TGGAGGCCCTGGTATGCCCGGATACCCAGGAGAGAAAGGAGATCCAGGAC
CATCAGGTTTACCTGGATCCGCCGGTCTGCCTGGTGCCCCTGGTCTACCT
GGACCACAGGGATCAGCTGGAGATTCAGGACAATGCATTGGTCTCAAGGC
CTTGTGTGCCTGCTATTTGCCGTCTTGAGTTTCGGCGTTCAAGAAACTGA
AAAGATTGGTTCGCTTAAAAAAAATAACTTGGTGAATAATTTTGATGAGT
TTTTAAGATTGTCAACTATAAAAATAATCTATCGAACTTCGAGGAGTTCA
CTGTTGCATGCGAAGGACAAAAACTTTGGATTCAGTGTCAACAATACGAA
TTGATCAAGATCAAAGAAGCATACTGGGGTCGTGAGGACCACGTTACCTG
TTCTGATACACCGGCCGGTCTGAGCCGTGAAGTCTGTGACGCCAACAGTG
ATAATGCCTTCACAAAGGTAGATGCACAATGCAAAGGTCAACAAAATTGT
GAAGTTGTCGCCTCCAATATTTTCTTTGACGATAACAGTTGTGGAAACGT
TTATAAATATTTGAAAGTGAAATACGAATGCGAGGCTGACCAGCAGAACA
GCATGGACGTCTTGAAAGAAGGCGGTCGCCGACGACGAAAGAAGAAGCGT
GACACCAAAGAGAAGCGATCCTTCAGGGATTCATAACTGAACCAATCAAA
CCGTCAACACAGATGCAAATGGGAGGAGATATGAATAGAATACTTCCAGA
TTGGCCAAAGATTGGTGACAGAATCACACAACCCTTTCTCGATCAATTGA
TGGTCAGTCAACTGTTGGAACAGAATCTGACTCTCGGATTCTTCTTAAAA
GGACTTAACGGACCACCAGGTCCTCCAGGACCACCAGGACCATCTGGAGA
ACCAGGAGCCCCAGGTTTACCCGGTGCACCAGGAGCCCCTGGACACGTTG
GTGAAGATGGTGCCCCTGGTCCAATGGGACCACCAGGCTTATCTGGAGGC
CCTGGTATGCCCGGATACCCAGGAGAGAAAGGAGATCCAGGACCATCAGG
TTTACCTGGATCCGCCGGTCTGCCTGGTGCCCCTGGTCTACCTGGACCAC
AGGGATCAGCTGGAGATTCAGGACAATGCATTGGTCTCAAGGCCTTGTGT
GCCTGCTATTTGCCGTCTTGAGTTTCGGCGTTCAAGAAACTGAAAAGATT
GGTTCGCTTAAAAAAAATAACTTGGTGAATAATTTTGATGAGTTTTTAAG
ATTGTCAACTATAAAAATAATCTATCGAACTTCGAGGAGTTCACTGTTGC
ATGCGAAGGACAAAAACTTTGGATTCAGTGTCAACAATACGAATTGATCA
AGATCAAAGAAGCATACTGGGGTCGTGAGGACCACGTTACCTGTTCTGAT
ACACCGGCCGGTCTGAGCCGTGAAGTCTGTGACGCCAACAGTGATAATGC
CTTCACAAAGGTAGATGCACAATGCAAAGGTCAACAAAATTGTGAAGTTG
TCGCCTCCAATATTTTCTTTGACGATAACAGTTGTGGAAACGTTTATAAA
TATTTGAAAGTGAAATACGAATGCGAGGCTGACCAGCAGAACAGCATGGA
CGTCTTGAAAGAAGGCGGTCGCCGACGACGAAAGAAGAAGCGTGACACCA
AAGAGAAGCGATCCTTCAGGGATTCATAACTGAACCAATCAAACCGTCAA
CACAGATGCAAATGGGAGGAGATATGAATAGAATACTTCCAGATTGGCCA
AAGATTGGTGACAGAATCACACAACCCTTTCTCGATCAATTGATGGTCAG
TCAACTGTTGGAACAGAATCTGACTCTCGGATTCTTCTTAAAAGGACTTA
ACGGACCACCAGGTCCTCCAGGACCACCAGGACCATCTGGAGAACCAGGA
GCCCCAGGTTTACCCGGTGCACCAGGAGCCCCTGGACACGTTGGTGAAGA
TGGTGCCCCTGGTCCAATGGGACCACCAGGCTTATCTGGAGGCCCTGGTA
TGCCCGGATACCCAGGAGAGAAAGGAGATCCAGGACCATCAGGTTTACCT
GGATCCGCCGGTCTGCCTGGTGCCCCTGGTCTACCTGGACCACAGGGATC
AGCTGGAGATTCAGGACAATGCATTGGTCTCAAGGCCTTGTGTGCCTGCT
ATTTGCCGTCTTGAGTTTCGGCGTTCAAGAAACTGAAAAGATTGGTTCGC
TTAAAAAAAATAACTTGGTGAATAATTTTGATGAGTTTTTAAGATTGTCA
ACTATAAAAATAATCTATCGAACTTCGAGGAGTTCACTGTTGCATGCGAA
GGACAAAAACTTTGGATTCAGTGTCAACAATACGAATTGATCAAGATCAA
AGAAGCATACTGGGGTCGTGAGGACCACGTTACCTGTTCTGATACACCGG
CCGGTCTGAGCCGTGAAGTCTGTGACGCCAACAGTGATAATGCCTTCACA
AAGGTAGATGCACAATGCAAAGGTCAACAAAATTGTGAAGTTGTCGCCTC
CAATATTTTCTTTGACGATAACAGTTGTGGAAACGTTTATAAATATTTGA
AAGTGAAATACGAATGCGAGGCTGACCAGCAGAACAGCATGGACGTCTTG
AAAGAAGGCGGTCGCCGACGACGAAAGAAGAAGCGTGACACCAAAGAGAA
GCGATCCTTCAGGGATTCATAACTGAACCAATCAAACCGTCAACACAGAT
GCAAATGGGAGGAGATATGAATAGAATACTTCCAGATTGGCCAAAGATTG
GTGACAGAATCACACAACCCTTTCTCGATCAATTGATGGTCAGTCAACTG
TTGGAACAGAATCTGACTCTCGGATTCTTCTTAAAAGGACTTAACGGACC
ACCAGGTCCTCCAGGACCACCAGGACCATCTGGAGAACCAGGAGCCCCAG
GTTTACCCGGTGCACCAGGAGCCCCTGGACACGTTGGTGAAGATGGTGCC
CCTGGTCCAATGGGACCACCAGGCTTATCTGGAGGCCCTGGTATGCCCGG
ATACCCAGGAGAGAAAGGAGATCCAGGACCATCAGGTTTACCTGGATCCG
CCGGTCTGCCTGGTGCCCCTGGTCTACCTGGACCACAGGGATCAGCTGGA
GATTCAGGACAATGCATTGGTCTCAAGGCCTTGTGTGCCTGCTATTTGCC
GTCTTGAGTTTCGGCGTTCAAGAAACTGAAAAGATTGGTTCGCTTAAAAA
AAATAACTTGGTGAATAATTTTGATGAGTTTTTAAGATTGTCAACTATAA
AAATAATCTATCGAACTTCGAGGAGTTCACTGTTGCATGCGAAGGACAAA
AACTTTGGATTCAGTGTCAACAATACGAATTGATCAAGATCAAAGAAGCA
TACTGGGGTCGTGAGGACCACGTTACCTGTTCTGATACACCGGCCGGTCT
GAGCCGTGAAGTCTGTGACGCCAACAGTGATAATGCCTTCACAAAGGTAG
ATGCACAATGCAAAGGTCAACAAAATTGTGAAGTTGTCGCCTCCAATATT
TTCTTTGACGATAACAGTTGTGGAAACGTTTATAAATATTTGAAAGTGAA
ATACGAATGCGAGGCTGACCAGCAGAACAGCATGGACGTCTTGAAAGAAG
GCGGTCGCCGACGACGAAAGAAGAAGCGTGACACCAAAGAGAAGCGATCC
TTCAGGGATTCATAACTGAACCAATCAAACCGTCAACACAGATGCAAATG
GGAGGAGATATGAATAGAATACTTCCAGATTGGCCAAAGATTGGTGACAG
AATCACACAACCCTTTCTCGATCAATTGATGGTCAGTCAACTGTTGGAAC
AGAATCTGACTCTCGGATTCTTCTTAAAAGGACTTAACGGACCACCAGGT
CCTCCAGGACCACCAGGACCATCTGGAGAACCAGGAGCCCCAGGTTTACC
CGGTGCACCAGGAGCCCCTGGACACGTTGGTGAAGATGGTGCCCCTGGTC
CAATGGGACCACCAGGCTTATCTGGAGGCCCTGGTATGCCCGGATACCCA
GGAGAGAAAGGAGATCCAGGACCATCAGGTTTACCTGGATCCGCCGGTCT
GCCTGGTGCCCCTGGTCTACCTGGACCACAGGGATCAGCTGGAGATTCAG
GACAATGCATTGGTCTCAAGGCCTTGTGTGCCTGCTATTTGCCGTCTTGA
GTTTCGGCGTTCAAGAAACTGAAAAGATTGGTTCGCTTAAAAAAAATAAC
TTGGTGAATAATTTTGATGAGTTTTTAAGATTGTCAACTATAAAAATAAT
CTATCGAACTTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039010XLOC_039010Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062230-exon-scaffold_362-1575043694:234691..234786TCONS_00062230-exon-scaffold_362-1575043694:234691..234786Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1575043694:233768..233834TCONS_00062230-exon-scaffold_362-1575043694:233768..233834Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1575043694:230299..230719TCONS_00062230-exon-scaffold_362-1575043694:230299..230719Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1575043694:230142..230158TCONS_00062230-exon-scaffold_362-1575043694:230142..230158Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1575043694:228433..229919TCONS_00062230-exon-scaffold_362-1575043694:228433..229919Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1510915933:234691..234786TCONS_00062230-exon-scaffold_362-1510915933:234691..234786Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1510915933:233768..233834TCONS_00062230-exon-scaffold_362-1510915933:233768..233834Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1510915933:230299..230719TCONS_00062230-exon-scaffold_362-1510915933:230299..230719Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1510915933:230142..230158TCONS_00062230-exon-scaffold_362-1510915933:230142..230158Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1510915933:228433..229919TCONS_00062230-exon-scaffold_362-1510915933:228433..229919Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1491911889:234691..234786TCONS_00062230-exon-scaffold_362-1491911889:234691..234786Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1491911889:233768..233834TCONS_00062230-exon-scaffold_362-1491911889:233768..233834Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1491911889:230299..230719TCONS_00062230-exon-scaffold_362-1491911889:230299..230719Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1491911889:230142..230158TCONS_00062230-exon-scaffold_362-1491911889:230142..230158Clytia hemisphaericaexon
TCONS_00062230-exon-scaffold_362-1491911889:228433..229919TCONS_00062230-exon-scaffold_362-1491911889:228433..229919Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062230-proteinTCONS_00062230-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:228433..234786 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0367372	0	0	0	0.521929	1.29593	1.31005	10.3964	7.01008	5.91099	20.9404	27.536	23.494	7.27937	44.5949	12.0783	8.01985	0.093478	0	0.641899	15.8041	21.9	21.0818	7.06121	18.2491	0.0129408	0.98633	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000922Lectin_gal-bd_dom
IPR008160Collagen
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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