TCONS_00062311 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062311
Unique NameTCONS_00062311
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length98

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062311 ID=TCONS_00062311|Name=TCONS_00062311|organism=Clytia hemisphaerica|type=transcript|length=98bp
aagcttttttgaTCGGATGAATACTTTAATAGATATACATGCACCCCTAC
AAAAACTCTCTAATCGACAAATTAAAAGAGGAGCTAAACCATGGATAA
Run BLAST on NCBI

transcript from alignment at scaffold_362:486429..486526

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062311 ID=TCONS_00062311|Name=TCONS_00062311|organism=Clytia hemisphaerica|type=transcript|length=98bp|location=Sequence derived from alignment at scaffold_362:486429..486526 (Clytia hemisphaerica)
TTATCCATGGTTTAGCTCCTCTTTTAATTTGTCGATTAGAGAGTTTTTGT
AGGGGTGCATGTATATCTATTAAAGTATTCATCCGAtcaaaaaagctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039050XLOC_039050Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062311-exon-scaffold_362-1491911889:486429..486526TCONS_00062311-exon-scaffold_362-1491911889:486429..486526Clytia hemisphaericaexon
TCONS_00062311-exon-scaffold_362-1510915933:486429..486526TCONS_00062311-exon-scaffold_362-1510915933:486429..486526Clytia hemisphaericaexon
TCONS_00062311-exon-scaffold_362-1575043694:486429..486526TCONS_00062311-exon-scaffold_362-1575043694:486429..486526Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:486429..486526 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062311 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top