TCONS_00062255 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00062255
Unique Name	TCONS_00062255
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1907

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_362:489670..503055-
coding sequence from alignment at scaffold_362:489670..503055-

transcript sequence

>TCONS_00062255 ID=TCONS_00062255|Name=TCONS_00062255|organism=Clytia hemisphaerica|type=transcript|length=1907bp
ATGATAACAAGCGGCATTTTTATGTAGTGGTTGCAAAAAGgAATGAATTG
AGAATCAATCATATATAACTAACAAGAGCTGAGAGATGTGTACATAGTAC
CTGGAAATCGATTATTGGTTCATTTCAACGGTTCGAGGACTTTCAAAACA
GCTATCTAATAACCAACCAAACCATATTGGCACTCACGATGTTTCATTTA
AACCAAGAACATGGTATCAACATCCAATTAACAGACAATTGCACTGTAGC
CACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCAGCCAACGTCCTT
TACAAGAAGGTGAAGTATTCATGATTGAGATCACGGACAGTAAAGATGGA
TGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAACCCCGAGGAGAT
TACCATCCCACAATACCTGCTACCAGATCTCAGTCGCCTTGGCAAATCAT
GCGTCTTTTCAATCCGTCCGTCCACATCAGACCCATTTAACAATCTCGAA
GCAACAAATCAGAATAATCAAAACAGTTCGATCAACAACGAGgttcattt
gaaatattttgattcaGTCGGTCGCAGTGAGAAAGCAACGCATAGCATTC
ATCCAAAATTACTTGTAAATCACAATTTCAAGGATCTCAAGCCGTGTGAT
ACAGGTAGCCGCATTGGATTTTTCATATCACCAGGCAGAGAATTATTTTT
CATCATCAATGGGATACAATATGGACCTTGTGCAGGACAAATTCCAATAA
ATGGCCCAGTTTATGCAGCTCTTGATTTGTATGGGATGACAAGTCAAATC
AAAATCGTAAATTGCAATGTTCCATCACTCTTAACATCGGGAATGCAAGC
AGCACGTGTATCGTTCGATAGAAAATGCATCACTGAACAGAACCTACCAC
GAGATTTGAAACGAGATTTATTGAACACTTATAAAACACCAGCAACTCAA
AGCACTCAAACTGAAACAGCAAGTGAAGAAAATGAACAAATAACTGAAGT
GCAGCAAGACCCTCACTCAACATCTGTCATTTTCTTTTAACAATCTAGTC
TATGGGGAAatcaatttgaattttgatggGTTTTTTGGGATGTTGACTAC
GATATGGTTCCACAACCTCGACCAGGGCTTTTATCATTCTTGTGGAGGAT
AGGTTGTGTGTGATATTGTTTGGGGTTttctttgataaattttatcaagC
TCGCAACAAGCAAAGAATTGCTCTAACCGAGAACCGAGATCCTCGATCGA
AAGAGGAACAATGGAACAATAAATTCTAAAGATGTAGGAATACAACAGCA
TTCGGTTAGCAATGACTTTATAAATAGCCATCACCAAATGGTTTTGGACG
GTTTACCCCAAACCAAAACCGGTATTAATTGTTCGTTAAAGTGAGACTTT
TAGTAGATGATTACCCGATAATATTTTGATATGTTCggttttattttagt
tttgttgAAGATGATTTTGTTCAGTTTATAAAAACAGACTCGACAACTTT
TagttttcatttaatttttttgtatgtAGAAatagacacccccttctcac
agacccactgggaacccttcccactggaaaaactgGCCAAGATATCGTCC
CGGTGGAAAATGATCCTCCAATTTCTGTCCCCACTGAAATTAATCAAATA
AGCCAATCctatcctcactgcaaaatatttactatttttcccttccccac
tgaattttctgacaaaagaattgaaatccccatttataaaaatatgagaa
tatcatatcaattcccatcgagtttcagtcagTTTCAGTTCAGTTTCAGT
GTAAATAGGGAATAAAGAAGAGGCTTTTAGAGTCAGGAAACATTATCAAA
TTTATAAAATCTTTCACAAACATTCACTTGTGACACGTTTAAAATCTTAG
TCGGtat

Run BLAST on NCBI

protein sequence of TCONS_00062255-protein

>TCONS_00062255-protein ID=TCONS_00062255-protein|Name=TCONS_00062255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MFHLNQEHGINIQLTDNCTVATRTESFSNALVFSQRPLQEGEVFMIEITD
SKDGWSGNLRCGITLHNPEEITIPQYLLPDLSRLGKSCVFSIRPSTSDPF
NNLEATNQNNQNSSINNEVHLKYFDSVGRSEKATHSIHPKLLVNHNFKDL
KPCDTGSRIGFFISPGRELFFIINGIQYGPCAGQIPINGPVYAALDLYGM
TSQIKIVNCNVPSLLTSGMQAARVSFDRKCITEQNLPRDLKRDLLNTYKT
PATQSTQTETASEENEQITEVQQDPHSTSVIFF

Run BLAST on NCBI

transcript from alignment at scaffold_362:489670..503055-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00062255 ID=TCONS_00062255|Name=TCONS_00062255|organism=Clytia hemisphaerica|type=transcript|length=13386bp|location=Sequence derived from alignment at scaffold_362:489670..503055- (Clytia hemisphaerica)
ATGATAACAAGCGGCATTTTTATGTAGTGGTTGCAAAAAGGTACTTTTTT
CATGTTTATTTATTATTTGCACCCTCGAGATATATCCGCCACAGTTTGAT
AAACATTGGTAGATCTTTTAATACTGTGTCAGTCCTTCTTTTAACCTTGT
TTTTGTTCAGTAGCCGCTTTATAATTGCTCAACATTATTGATACGGTACA
CGTTTTTTTATATAAGAACAAACTATAAGAACATAAGACTTCGATGGCCA
AAATGTTAAGAACAAGTTAAGAACATTTTAAGGCTTTGTAGACTCTAAAA
TGGCCAATTTCTAAAGAAAATGGTGAAAATAAGAAGATGTTAAGAACATT
TCAGACTTAAAACTCAAAAAGTCAAGAACATCATAAGATGTTCTTATAAA
AAAAAACGTGTAGTTTGGAATACAAATCTAGTTTGGGATGGTACGTCATA
ACCTTTCTTTCTCATCTGCGTACTTATGGTTTTAACATTTCATCTTTTAT
CTTTACACGTTTTTTTTTATAAGAACAAACTATATAAGAACATAAGGCTT
CGAGGCCCAAAAATTTAAGAACATTCTAAGAACATTCTAAGGCTTTGGAG
ACTTAAAAACATGTATTTTCTTAACCCTATTAGCCCCAGGGGGGGGGTAG
AATCTACCACGCTGGAGTTCTTTTGTATATATCTCGGAGAAAAATTTTTC
AAACGACTTGAAACTTTCTGACTTTTAATAAAATCTTATTAAGAGTACTT
GTGCAAAATTTAAGTNAAGAACATTTTAAGAAAATTTTTAAGCTTCAAAT
CCAAAAAACTAAGAACATCCGAAGGCTTCGAAAATTTTTGACGTTCTTAT
AAAAAAAACGTTTAAGTATATGAAATATGTGACAGTGTCGTTTTGATATG
GCTGGATGTCTCTCAATTGTGAGGTGATTGTTGGATGACTACGAATTGGT
ATTAAGCGTTTTTTTTTTTTGACAAAGGAATGAATTGAGAATCAATCATA
TATAACTAACAAGAGCTGAGAGATGTGTACATAGTACCTGGAAATCGATT
ATTGGTTCATTTCAACGGTTCGAGGTAAGCTCGCAACTAACTTCGTTATT
TTCTTTTTCTACCGGGTGCGCCACAAAAAAAGTTTCTCTTTAAAACTAAT
TTTCTCGAAAACTAAAAATTCNGATAGGCATTGATAATACAAATTTAAAA
AATCAAAAGAAAATTTTTGAAAATGATGACGTCATCATTTATGACGTCAT
CAAATTTTGAAAATATTACTCATCTTCAGCATAGATTTTAAGAAAAACTC
TTCGTGAAATTTGCAAAACCGGCAATTATGTTAAAGAACAGTCTTTTATC
TTTCAGAATCTTCAAACAGATNTCCTATTTCATTGGAAAGAAGAAAGATA
GACTTAAATTTCTATAGGTCATTTATTAAATTCGATTCATTAGATCAAAA
GTTATGCTCAATTGAATAAAAAAGTTACTTTCTGAAAGTGCTCAAAAACG
TTAAAAATCGGCCTATCAAATTAAACAAGAGCATAATTACATGATACATA
AGTATGTTCGTTTCAGTCATAAAAAATGATAATTAGTCTTGATAACCTTT
TGTTATATAAAGGAAGGTTGATTTTCAATGAAAGGAAGAAAATTTTTCGA
AAAAAGGCCAAAAAGTCTGGTAAAATTTATAAAAATACATCAAATATGGG
TTTCGACGGTTTCGAAATACACCAGCATTACATAGAGTTTATCCAGTCTA
AAATCAAAAATCTGAGGAAAATTTGGTATAAATGGATTTGTATAAAATGA
TTTTGATGAAGATTTTAAACCCTTTCGACTTTTCAGTTACGAAATTATGT
GTTTAAATTACTAAACAATGCTTTTAATCATTTATAGCGTTTTTAAGCAC
TTTCTAAAGTAAATTTTTTTATTCAATTCAGCATAACTTTTGATCTAATG
AATTCAATTTAATAAATGACCCATCAAAATTTAAGTTTACCTTTCTTCTT
TCCAATGAAATAGGAATGGTTCTTTTAGAATTTTTAAGTTTTCGAAAGAA
TTAGTTTTAAAGAGAGGATTATGGAACTTTTTTATGGCGCACCCGGTATA
TGCGATATATGGGCCCCGAGAGGACCATACAATGTTGAAGTCTGTTCGCT
TTAAGTGTGCACTCTTTTTTTAAACCATGTGGAAACCATGGTAACGTGAT
AAGACCGTTGGGAATAGTTTCCACATTGTAGCAAAGAAGAATACACACTG
AAAGATAAAGGGCTTTATTGGAATACTTTCTTTTTCAGCCTTAACTAGTT
TATAGTGCTCACCAAAACTACGTAACGCTAACGCATCTTTCTGTCTGTTA
CATGTCTGATACAATTTTTTATAGAGGTTTGATTCTGGAAAGAAGCCGCA
AAAGTTTTCGCTAAATAAAAAGTACTTTCCAAAACAAACAGGAAGCTTAT
TACCTAAACTGAAGTGTTTTCTTGAGCTTTCCTCGTGTCACACGAGTACT
GAACGCGTCAAAAAACGTGATTTTTTCTTAAGACAATATGCTAACGGTAA
AAAATACTTAAAAACGCGTGATTTTTTTTCCACCATATCTTTGTCTACTG
GGTGACTCGCGTGCAAGCAAAAGCGAGATGTTGGGATTGAAATCTTGAGG
AAAAAAGCTTTTGGACTTCTTCATGTCAAGTGGTTTTTTCTATTTTCTAG
CTACTGGCTGGCTCACGTGAAAACTCACGTTTTTAAGGAAAGAAATACTC
TAAGGGCGTGTACCAAGGGTCATTGATAAGCTTCTCTTGCATGTACTTAA
AATTTTACTTAAGACCTTCAGGAATGGAGAATTTCCCTAAGCTTACGTGC
TTTTTTCACATGTACGTAAAATTATTGGGTAATGGGTGTTGTCTACGCAT
TTAAACGCAGCAAAAAATGTCATTTTCAGCGTTTCACTGTTCCCGAAAGA
AACAGTGAAAGATCCCGGAAACGAGTCAGGAATATTTCCATGGGAATGAT
AAACTTTAACCATCCTACGGTAATAATACTGTGTTATTACCACAGATTTC
TGTAAAGCCCGAAGGGCTAGATGTCGTGCTTTAAGTTCTTCCAAGCAAAA
AGAAGTGAATATCGCAAAAAGAAATACTGCTGCTATTGTTTTCGAAAACC
CGCGAATCTTCTTATTGGTCAAGCGCTGAAATTCTATTGTAATGTCACGT
AACCTAGGTATGATTTCTTACCTAACTTCGGCACACTTTTCAGCAAAAGC
ACGACATCTAGCCTTTAGGGCTTTATAAATCTATGATTATTACTAACATC
GAGAAATAAACATCATTTATATCACACAATGACAACATTTCAGCACGAGA
GGTTACCTGATGTTTTGCACACTATATTTCGTGATATAATTTGAACCCCT
CTTTTCTTTGTGATATCATGAAATTATGATGAGAAAAGGGATTCGTTCTA
ACAATGAGGAGTAACATTTTGAAGACTTTGTTGATAAAATCTAGATCTAT
TGGACGCTCTTGATTATCTTCGTAATCATATTTTAAACTTTTTGGACTTA
CCTATGTTATGACGAACTTTTGATTTAGTAACATGTCATTTTCTGTCCTT
CAATATACCTGCTTTGGGATTTCTCTTTGTTTTTTTTGTTATGCTTTTTT
ATATCTGTGTTAGTGTATTTTTATATTTTTATTTGGAATCTTTTGTCAAC
AGCAGCTATATTGATGGTTATAAAATTTGGCAAAATTTTTGGGTGCTTGT
TAGATGTTTCAAATTTTTTTATAAGAACCAATAAATTTTTGACGAGGCTC
GACTGTTCTTATTTTTTTGTTACTCAAGTTTTTGAGGATTTATACCCAAT
TTTTATTACTTTGATTGCTTGAAATTGAGTAATCAGCATATTTCTCGTAA
CTTGCTCTTGTTATTTGGCGATTTTGAGCCTCATTGTTCTCCAAGATTGT
TTTTAATGATTTTNNATTTTCAGCCTAAAATGTTCTTAAATGCGTTCTTA
ATTTTTCAGACTACTCTAAATCGACAATATGATACAAAATAAAGAGCACT
TAAATTTGGCAAAATTTGGTCAATATTTGACTCTCGACTTTTGAAGATCC
ACCCCTAAATTCGGTTAAAACTGCTTAAAAAGAGGAAAAAATTGTTGTTT
CTTGTCATTTTTTCCAAACTGAGGCTGGGCATGTTCTTAAGATGTTCTTA
ATTCTTCGACGAATTTCAGCCTATATGTTCTTATAAACTAGGTTCTAATA
AAAAAAAAAAACGTGTAGCATACATAGCCTTAAGTTTTTTCAACTGGCAC
ATACTGTACCAAACATCATCCAGCCCAAGTTTCTCCCCAGGATCCAGGCT
TTACTTTACAGAACACCCAAATTGTATTGCACAGGAAGTCCAACTTACGT
GAAATAAGACACTTTAACCCTCAAGTACATTTCTATCATCTGTCAAAACA
CAAACGTTAGATCAACATTTAAATAACATATTTTAACCAACCTTTAGGTC
AAAAAGTATAATGTGATATTCGATCTCGTTTTCTCTCATTTCTTTTTCGT
GACATAGCAGGTATGGGAAATCCTCTTTGTCATGAAATGAAGGGAGACTT
GCTTTTGTTTTTGTTATTTTTTGTACAAGTGTTAATGTGCTATAAGTGAT
CTAGCACCCCCACCTTTTCCTATAATTTGCTTTAAATATAGCTTTCTAGT
CAGTTGCTTCGTGGTTAAAAAGTTTATCGCATGCAATAGTTCTTGGGGTT
GTTTAGTTTGTAATAAATTGGTATCGATTAAGATATTCTAACATCGGAAA
CTTTGGGTTTTGGCAGACTGAAAGCAGAACAATATTTAGGATGAATATGT
AGATGTATATTTTTATTAGAATATTCAAGGGAGACTCTTCTTCTCTGTTC
ACCACAAGCGAGTATGCGGCGCTCAACACTTAGTCTTTTAAGCACTCTGG
TGACAACAGCAGTCTATACTCGCTTACCCGAGCCGCACTGATGAGTCCTG
GGAAGGACGAAACGCGTGCCTGCGGATATATATATTAGAATATTTAGAAT
TCGCACAACCATCCAAAGGAAAAATATCTTTCAAAGAGCTTCTTCAAACA
ATTTTTAATATATATATGGCAGCCCAGAGTTTTTACCATCCGGGAATTGC
GCTCAGATGCTTTCAAAGGAAGAATTTTTATTTAATAAAAAAGAAGACTT
TAACAAAAATTATACATATTCTGTAAATTAGCTCAAAGATCTCAATACTG
CCAATGTGGTGTTTTGTATACCATTTGAAAGAAAAGGTGTGAAAAATCAA
AATTGTGTAACGGGTAAATAGTTTTAAACAAACTTTACATTTGAAATTTT
CAAATATTAGATTTTTACTTTTAGTGCGAGTGAAATAGTGAAATGAACAC
TGAAAGTTTTAGCGGTTCATTTTAGTACCTTTAAAGGTTTATTTTAGCGA
TACCGCAAAACGACCCTTTAAAGGTACAAATTAAAAAAATACCTATAAGG
TATTTTTTCATTCGTACCTTACAGGTACTTTTAGATACCTTTTGAGGTAT
GAAAATAATACTTCCAAAAGAATTTTTTTGACCCCGAAAAGGTTTTCCTA
AGTCACCAAAAAGGTAGTTTTCAAACGATACCGCAAAACGACCCTTTTAG
GGTAAAATTTGTCTGATATACCATTAATGTGCTTTAAAAACACCACCAAA
AGGATTCAAAAGTGCCGACAAAGCGGTTTTAGTTTTTACCCACGGGGTTG
TTTTTCATCACTTACATGTGATGGTGCGAAAAAGGTATTTTCCTTAACCT
CCTAGGTATTTTGAATTTCCTATCATTTCTTCACTAGAATAAGCGTATAC
TAATTGAACGAATAACTCATAAAGTTAATACGGGAGATCAAAGCTCCTAT
CTTTATTTTTGTAGATTGCATTAAATGAAATTTACAACATTGATAAATAT
AGAAGAAAGCCAAATAATTCAATAAATGGAATGGTGTATCATAAATTAAA
TAAAAGTTACAATTAACAAAACTAGTAAACCGATTTTATATCAGCTAATA
ATTATACACTATTTACTATTCAGTAAGATTATTCAATCTTTCTCATTTAT
TCACTGCCGTGATTTCTTCTGTATAAGACTGAGCAATTTCATAGGGAAAT
GCCGTCAGAGGATCTCTTGACTTTCCTATGGTGATGCCATCTAGGTGAAT
GAAGAAATCTTGATCCTCAAAAGTGTCGGGGTTAGCATGGCCGATTCGAG
GAGAAAGCGCGTTCTCGATTCCATAGTAATTTTTGGTATCTTCTCGAAAT
AGTACCGGTAACGTTAATACTCCCACAACAGCATATCGATCTGTTGAAAA
AGAAAGTTACATTTTGTAAAACTTTTGTTCATTATATTCTTACTTTCAAT
GATATTTCAATGATCCTATATACGCTTGTTGCAAAGTAACATATTAGATG
CCTGGGGCACTGACCTTGACGGCCGACGGGGACGTGCCGCTGTAGTTTGA
AAAGTTGACACTGTCAGATATGAATTTTTGGTAAAATCGGGACCCTATCA
GAGCTATTTCCCTATTTCCAGTTAATTTGGGCCCTGTCAGATATCTTCAG
AGCCTAAAAAGGGGACTCTGACCAGTGGCACGTCCCCATACCCAATTTTG
CCTGATAGCCCCCTCCTGATTCAATTAGCCGAATTTTGCTTACCTGTTCG
CCATTCGCAAGGTTTGGGTATATTTCAATCAGAATTTTGACGGATATGCG
ATCCTTGATCAATTTTGCTCGTCGATACGCTCAAAATTCCATTTTCAGGG
CAGGATAAGCTCCAAACGAGTCGTTCTTTTTGCTTAGAGCAATAGGTTTG
TGATTTCAGAGTTTCAATATGCTTTTGAACCGAATGTTGATTTTCTCCAG
CAGGGATATTTGGGAGAGTTGATCAATCCCCAAAATTTTTTGGATTTTTT
CAGCATCACAAAATAATAGCTATAAGATAATCTAGCGAGCGGCTAAAATT
CGGACTTTAAATAATTTGCGAATGAGAGCTTCGACCTGTCAGATTGACAG
ACAAAGAGCAAATGAGCGGCACAATCAAAAAGTGTATTTTTAAAAGAGGC
GGGAGTCTGGGTTTCTCTCGGACTTTAAGGAGAATTTACTCATTCTAGTG
CTGGAATTATACCGCGGAAGTATCATTGTTTTCATTTTCTCACAACGTCC
CGTCGTTCTCTCCGTCCCAGGACTCTTTGGAATGTTACCTCAAAGAGCAT
CAATTTTATCAGAAAGGGTACGAATTTGTATCTCTAAGGTATCAAAGGTA
GCGAAGCTCCATAGACACGATTAGGCAAGAATCATAGACGCGATTAAAAG
TACCTCTAAAGGTATTTTTTTGCCGCCTGTTTTCCTGCAAGAAAACATTC
AAAAATACCTCAAAGGGTACAAATTTGTATCTCTAAGGTATCAAAAGTAG
CAAAACTCCATAGACACGATTAGGCAAGAATCATAGACGCGATTAAAAGT
ACCTCTAAAGGTATTTTTTGCCGCCTGTTTTCCTGCAAGAAAACACTCAA
AAATACCTCAAAGGGTTCGAATTTCTAAGGTATCAAAAGTAGCGAAACTC
CATAGACACGATTAGGCAAGAATCATAGACGCGATTAAAGATACCTCTAA
AGGTATTATTTTGTCGCCTTATCCCCGAGGCTTCAAAGGCAGCATAACTC
CAACCCATGATAACATCTATGAAACAACCTTAGGCTAAAGGGTAGCTTTT
AAAAGTGAAATTAATTGAGCTTTAAAGGGTTTCAAGCGGAAATACGGTTA
GAAAAATAACTTTCAGAGTCTTGGATTATAACGATTCCCTAACACAGAGC
ATAAAATGTTCAATTAGAGACCTTTATGATCTGTCTTGCGTGCTCGTTCA
TGCCAAACTAGACTCCTCAAGTTCTGCCGTTCAATCTTAAGTTTTTTCAA
ACGACATCCCCTTTCTACTGAGCGAATGAGAATCTTGACACTCTACTTTA
TACCGTCGAATGGTATTTTATTATACTTTGATATTTCGGAAAAACTGAAA
ATTGTTTATGAGTTACCTATGAGGTACATAAAGATCCCTTTAGAGTTAAG
GGGATCTTCAGAATTCCTTCGAAGGCTTTTTTCCTGCCCCTGCGGTTACT
ATATTATACCTTGTCAACTTTTGAATTTTTGGAAATCCCGAAAATCACTC
AAAAGGTATAAAATAATTCCTACGGGGTGTTTTGAAATTACCTTAACGGT
GTTTTTTAAAATCGTGCCACAGAAGGTATCATTTTAATCCTTAAAGGACT
ATATCTATTCCCGAAAAGGGACAAATTTGTTATCTAAAGGTAAACGCGAT
TATTAGAACCTCTAAAGGTACTAAAATGAACCGCTAAAACTTTCAGTGTA
TGTGAATCGATGAATTCAAACTCTGTGTGTGATTTTTGTTCTTGTTTGAA
TCTCTGACGGTCTCACAAGGTATGTTATATTCACTTTTAATTGAATTTCT
GGCGATTGAAACACCCCTATCTCAACAGAGAAATGAAAAGCGAAGAACAT
TTGTCTATTTGTTAGACTTAAAACCCAGTTTTTTCATTTCACATCTTTCC
GATGGCTAACGAAAGTTCTGAAAACCTTTGTTCAGCTAGGCGTTTTAGGC
GGTTGAGGTTGGGGCATGATGGGGCTGTCTAGCTTTTTTCTAAACACCCC
TCTTCCAGTGACTCGGTGAGAATCCAGCTTGCGTTGGACGCGTTTGTTAA
GTTTAGGGTTATCTAAGTAAATTTATTAACCCTTTAAGTGTCATGGTCAT
TTTTTTCTAAGTTTTTTAAAGAAAATTGCTAGTTCAAATTTTAGAGGCTT
ATATCTCCGGATCTAGAAGGAGTTAGAAGCTCGTTTATAGTTCGTTGGAT
AGCTTAGACTATCCTCATTCTTTTATACTATATAAGAACATAAGGCTTCG
ATGGCTAAAATGTTAAGAACATTTTTAAGGCTTTAGAGACTCTAAAACAC
CAGATTTCTTAGAAAATGGACAAAAATACTCACAAAAAGGAGAAAATAAA
AACATGTTAAGAACATTTTAAGGCTTTGGAGACTCTAAAACACCCTATTT
CTTAGGGAAATGGACAAAAATGCTTACAAAAATGGCAAAATAAGAACACG
TTAAGAACATTTTAGGCTAAAAACTCAAAAAGTTAAGAATATTCATAGGC
TTCAAAAATGTTGGATGTTCTTATAAAAAGATTTTTGGATGTTCTTATAA
AAAACGTGTACAGTACAGTATAAGATCGTTCCCTGATAGTTGCTACTCAA
CGGATGAGTTTTATTCTTATTCTTATAATTATGATTAAACTTTTCTTATA
AATAAACAAGATTATTCATGAAGAACTTTTTCTAAATGCAAACAAAAGAG
GGCGATTAACATGGAGACCGTGCATTTTCTAATTATAATTACCTAGAGAT
AATTAGTATTATGTTTGTAAAGAGCTTGTTAACTTTTTGCGAATCAATTT
ACTCTAATTGGGCTACCATAATTTGGGTTAACAATCAAAATGATTAAAAA
TAGCGAACTTTTTGCACGCACATGGAACGGTACCTGTTATTAAATAGAAA
AAGGACTGGGACAGGCTAGTACCATTCCTAGAAAGTGCAGTAGACATTTC
TTAAATCGCATCTTATTTTCAAAGATCTTTTCCTCTCTTTATATTTTCTA
GCAAAGTAGTTAAAGAATCTACTCTTCATTTTGAAGGGGATTATCTAGGG
GGATCCCCATTGTTAGGTTGTTACAATTTGAATACGTTCGTAATTAGTGA
CAGGAAAATGAACTATAGCCACCTGATTATAAGTGAAATTAGTTCTGCCT
TAGGATGGCCATGTAATTAGATTGATTTGAATTTTGTTGTTTTCGAGAAA
CGTGCTCCTTTTCACAGGCGCTGGTCATCACAGGTGGATATTTGTTTATT
TAGTATCTTTTTTTTGTGGAGTTCGTAGTTTTCTGGTGTACGTGAATCGG
ATTAGAAAAAATTAGACATTGTTATGAAAGTTAGCTTTTGTTTGTGTGCT
TTTGTGGAGTTGCTTCACTTCAAAAAAGGACTTCTGTATCATGTGTTTGG
TAGAAACTACTAACCCTATACCAACTATGGACGGGTTTCAATGTTTTGAT
TTTGTGCGGGCGGACTGATGTGGGCGGGCGATTGCGCTTAATTATTGGAG
GCAAAAAGACTTACGATTTATATGGAGGCGAGTGAATATCAATAATATTT
TTGATAACTACCAGTCATATCTGTTTATGAAGCCTATTATACCTCTGAGA
AAACATACTAAAATTTCTTTTCAGAAGTCCTACCAGAGACTTCGTCAAAA
CAAAAAATCTGCTTGCCTCCAGCAAATGTTATGGTCTTTCTGCCTCCAAA
AACTCGGGCTGTAAGTCACGTGAGTAAACAAATGACGTATCACAAAAGCC
ATTTGTTTGACACTTGGGTAATAAACTAAGTTATAAAAGGAGTTCTGAGG
TCAAACACAGAATAAGACATTTTTTTGCTCTACTTACTTACCTACTTTAG
GAAAAACAGAAATCTTACTTCAATCTTGTTCTTCTTGCAGGACTTTCAAA
ACAGCTATCTAATAACCAACCAAACCATATTGGCACTCACGATGTTTCAT
TTAAACCAAGAACATGGTATCAACATCCAATTAACAGACAATTGCACTGT
AGCCACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCAGCCAACGTC
CTTTACAAGAAGGTGAAGTATTCATGATTGAGATCACGGACAGTAAAGAT
GGATGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAACCCCGAGGG
TGAGTTTTGAAGATATCTCATACAAAATATTAGAAGAAGCTACCATGTCT
CAAGCTGAAGCAGAATGATGCGTAATCATTGCTGAGTAGTCAACAGTTCG
ATGCCGGCAATTCGATCAATCAAGACCATTCTTTCACCTCCTCGTCTCTA
GCGAGGCCAGTTATTTTTTCGTATTGAACAAATTGCCAGTGCTGAACTGT
GTTCAACTTCAGTGGTCTACTCAGCAAAGATGATTGTATCATTGTTTTTT
TTTCAACTGCCGTGGTTTGAGAAAGATAAAGTAGCTCTATTGCATAGTGT
GTTTTTGAAAAAAATTTCATTACATTCGCTGAGTTTTCTCAGGTATTTTA
TTGTTGAATTAGATATCTTATCTGAATTACTGATGAGCGCTATTCCCGCG
TTCTGTGTCCCCGCGTTCTGTGTCCCAGGGAAAACAGATAAGACGCTTCC
AGACAGGTAAGAAAATGGTTGATAAAACTTTATTTAAATCGGTTCTGCTT
CATCTTTCTATCTAGAGATTACCATCCCACAATACCTGCTACCAGATCTC
AGTCGCCTTGGCAAATCATGCGTCTTTTCAATCCGTCCGTCCACATCAGA
CCCATTTAACAATCTCGAAGCAACAAATCAGAATAATCAAAACAGTTCGA
TCAACAACGAGGTTCATTTGAAATATTTTGATTCAGTCGGTCGCAGTGAG
AAAGCAACGCATAGCATTCATCCAAAATTACTTGTAAATCACAATTTCAA
GGATCTCAAGCCGTGTGATACAGGTAGCTGTTAGGGTTTATTTCACATAG
CATAGGGGCTACTCACACCTTGATTAGAAGGGTTGTATATGAATAAGCCC
TACATAACTTTTTTTTAACATCAGTGGTACTTCAATATGGCTTTCTTTCG
CCGTCTGATTTAATTTGCAGTTCATTGTTTATTTTATTTCAAGATATTTC
AAGAGACATATAAAAATTTTGTACTTTTGTGTCACATAGCAGAATAAACC
CATTGCACGAGCTTCGACAAATCGGGTTATCAGGGATCTATCAGCAAGCC
TTGTTATTTATATTCCCTATACCATCTCGAGCAGACCGTGTAACTGATTG
TATCCTTCATTGTGTTTTCAAAAGGTAGCCGCATTGGATTTTTCATATCA
CCAGGCAGAGAATTATTTTTCATCATCAATGGGATACAATATGGACCTTG
TGCAGGACAAATTCCAATAAATGGCCCAGTTTATGCAGCTCTTGATTTGT
ATGGGATGACAAGTCAAATCAAAATCGTAAATTGCAATGGTAAGTATCCA
AAGAACCTTCTTACAAGCAGAAAATCTCCGAGCAGACTCTGACTACTCCA
CACTACTCTAAAAGCCCAGGCTCCGTAAGAGAATCTGCTAATCAGAAGTT
CCAGCATTATTTTGTAGTTTGAATAATTTTTGAACACTTGCTTTTTAGTT
CCATCACTCTTAACATCGGGAATGCAAGCAGCACGTGTATCGTTCGATAG
AAAATGCATCACTGAACAGAACCTACCACGAGATTTGAAACGAGATTTAT
TGAACACTTATAAAACACCAGCAACTCAAAGCACTCAAACTGAAACAGCA
AGTGAAGAAAATGAACAAATAACTGAAGTGCAGCAAGACCCTCACTCAAC
ATCTGTCATTTTCTTTTAACAATCTAGTCTATGGGGAAATCAATTTGAAT
TTTGATGGGTTTTTTGGGATGTTGACTACGATATGGTTCCACAACCTCGA
CCAGGGCTTTTATCATTCTTGTGGAGGATAGGTTGTGTGTGATATTGTTT
GGGGTTTTCTTTGATAAATTTTATCAAGCTCGCAACAAGCAAAGAATTGC
TCTAACCGAGAACCGAGATCCTCGATCGAAAGAGGAACAATGGAACAATA
AATTCTAAAGATGTAGGAATACAACAGCATTCGGTTAGCAATGACTTTAT
AAATAGCCATCACCAAATGGTTTTGGACGGTTTACCCCAAACCAAAACCG
GTATTAATTGTTCGTTAAAGTGAGACTTTTAGTAGATGATTACCCGATAA
TATTTTGATATGTTCGGTTTTATTTTAGTTTTGTTGAAGATGATTTTGTT
CAGTTTATAAAAACAGACTCGACAACTTTTAGTTTTCATTTAATTTTTTT
GTATGTAGAAATAGACACCCCCTTCTCACAGACCCACTGGGAACCCTTCC
CACTGGAAAAACTGGCCAAGATATCGTCCCGGTGGAAAATGATCCTCCAA
TTTCTGTCCCCACTGAAATTAATCAAATAAGCCAATCCTATCCTCACTGC
AAAATATTTACTATTTTTCCCTTCCCCACTGAATTTTCTGACAAAAGAAT
TGAAATCCCCATTTATAAAAATATGAGAATATCATATCAATTCCCATCGA
GTTTCAGTCAGTTTCAGTTCAGTTTCAGTGTAAATAGGGAATAAAGAAGA
GGCTTTTAGAGTCAGGAAACATTATCAAATTTATAAAATCTTTCACAAAC
ATTCACTTGTGACACGTTTAAAATCTTAGTCGGTAT

Coding sequence (CDS) from alignment at scaffold_362:489670..503055-

>TCONS_00062255 ID=TCONS_00062255|Name=TCONS_00062255|organism=Clytia hemisphaerica|type=CDS|length=3408bp|location=Sequence derived from alignment at scaffold_362:489670..503055- (Clytia hemisphaerica)
TTCCATCACTCTTAACATCGGGAATGCAAGCAGCACGTGTATCGTTCGAT
AGAAAATGCATCACTGAACAGAACCTACCACGAGATTTGAAACGAGATTT
ATTGAACACTTATAAAACACCAGCAACTCAAAGCACTCAAACTGAAACAG
CAAGTGAAGAAAATGAACAAATAACTGAAGTGCAGCAAGACCCTCACTCA
ACATCTGTCATTTTCTTTTAAGTAGCCGCATTGGATTTTTCATATCACCA
GGCAGAGAATTATTTTTCATCATCAATGGGATACAATATGGACCTTGTGC
AGGACAAATTCCAATAAATGGCCCAGTTTATGCAGCTCTTGATTTGTATG
GGATGACAAGTCAAATCAAAATCGTAAATTGCAATGAGATTACCATCCCA
CAATACCTGCTACCAGATCTCAGTCGCCTTGGCAAATCATGCGTCTTTTC
AATCCGTCCGTCCACATCAGACCCATTTAACAATCTCGAAGCAACAAATC
AGAATAATCAAAACAGTTCGATCAACAACGAGGTTCATTTGAAATATTTT
GATTCAGTCGGTCGCAGTGAGAAAGCAACGCATAGCATTCATCCAAAATT
ACTTGTAAATCACAATTTCAAGGATCTCAAGCCGTGTGATACAGATGTTT
CATTTAAACCAAGAACATGGTATCAACATCCAATTAACAGACAATTGCAC
TGTAGCCACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCAGCCAAC
GTCCTTTACAAGAAGGTGAAGTATTCATGATTGAGATCACGGACAGTAAA
GATGGATGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAACCCCGA
GGTTCCATCACTCTTAACATCGGGAATGCAAGCAGCACGTGTATCGTTCG
ATAGAAAATGCATCACTGAACAGAACCTACCACGAGATTTGAAACGAGAT
TTATTGAACACTTATAAAACACCAGCAACTCAAAGCACTCAAACTGAAAC
AGCAAGTGAAGAAAATGAACAAATAACTGAAGTGCAGCAAGACCCTCACT
CAACATCTGTCATTTTCTTTTAAGTAGCCGCATTGGATTTTTCATATCAC
CAGGCAGAGAATTATTTTTCATCATCAATGGGATACAATATGGACCTTGT
GCAGGACAAATTCCAATAAATGGCCCAGTTTATGCAGCTCTTGATTTGTA
TGGGATGACAAGTCAAATCAAAATCGTAAATTGCAATGAGATTACCATCC
CACAATACCTGCTACCAGATCTCAGTCGCCTTGGCAAATCATGCGTCTTT
TCAATCCGTCCGTCCACATCAGACCCATTTAACAATCTCGAAGCAACAAA
TCAGAATAATCAAAACAGTTCGATCAACAACGAGGTTCATTTGAAATATT
TTGATTCAGTCGGTCGCAGTGAGAAAGCAACGCATAGCATTCATCCAAAA
TTACTTGTAAATCACAATTTCAAGGATCTCAAGCCGTGTGATACAGATGT
TTCATTTAAACCAAGAACATGGTATCAACATCCAATTAACAGACAATTGC
ACTGTAGCCACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCAGCCA
ACGTCCTTTACAAGAAGGTGAAGTATTCATGATTGAGATCACGGACAGTA
AAGATGGATGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAACCCC
GAGGTTCCATCACTCTTAACATCGGGAATGCAAGCAGCACGTGTATCGTT
CGATAGAAAATGCATCACTGAACAGAACCTACCACGAGATTTGAAACGAG
ATTTATTGAACACTTATAAAACACCAGCAACTCAAAGCACTCAAACTGAA
ACAGCAAGTGAAGAAAATGAACAAATAACTGAAGTGCAGCAAGACCCTCA
CTCAACATCTGTCATTTTCTTTTAAGTAGCCGCATTGGATTTTTCATATC
ACCAGGCAGAGAATTATTTTTCATCATCAATGGGATACAATATGGACCTT
GTGCAGGACAAATTCCAATAAATGGCCCAGTTTATGCAGCTCTTGATTTG
TATGGGATGACAAGTCAAATCAAAATCGTAAATTGCAATGAGATTACCAT
CCCACAATACCTGCTACCAGATCTCAGTCGCCTTGGCAAATCATGCGTCT
TTTCAATCCGTCCGTCCACATCAGACCCATTTAACAATCTCGAAGCAACA
AATCAGAATAATCAAAACAGTTCGATCAACAACGAGGTTCATTTGAAATA
TTTTGATTCAGTCGGTCGCAGTGAGAAAGCAACGCATAGCATTCATCCAA
AATTACTTGTAAATCACAATTTCAAGGATCTCAAGCCGTGTGATACAGAT
GTTTCATTTAAACCAAGAACATGGTATCAACATCCAATTAACAGACAATT
GCACTGTAGCCACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCAGC
CAACGTCCTTTACAAGAAGGTGAAGTATTCATGATTGAGATCACGGACAG
TAAAGATGGATGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAACC
CCGAGGTTCCATCACTCTTAACATCGGGAATGCAAGCAGCACGTGTATCG
TTCGATAGAAAATGCATCACTGAACAGAACCTACCACGAGATTTGAAACG
AGATTTATTGAACACTTATAAAACACCAGCAACTCAAAGCACTCAAACTG
AAACAGCAAGTGAAGAAAATGAACAAATAACTGAAGTGCAGCAAGACCCT
CACTCAACATCTGTCATTTTCTTTTAAGTAGCCGCATTGGATTTTTCATA
TCACCAGGCAGAGAATTATTTTTCATCATCAATGGGATACAATATGGACC
TTGTGCAGGACAAATTCCAATAAATGGCCCAGTTTATGCAGCTCTTGATT
TGTATGGGATGACAAGTCAAATCAAAATCGTAAATTGCAATGAGATTACC
ATCCCACAATACCTGCTACCAGATCTCAGTCGCCTTGGCAAATCATGCGT
CTTTTCAATCCGTCCGTCCACATCAGACCCATTTAACAATCTCGAAGCAA
CAAATCAGAATAATCAAAACAGTTCGATCAACAACGAGGTTCATTTGAAA
TATTTTGATTCAGTCGGTCGCAGTGAGAAAGCAACGCATAGCATTCATCC
AAAATTACTTGTAAATCACAATTTCAAGGATCTCAAGCCGTGTGATACAG
ATGTTTCATTTAAACCAAGAACATGGTATCAACATCCAATTAACAGACAA
TTGCACTGTAGCCACCAGAACTGAGAGCTTCTCTAACGCTTTAGTGTTCA
GCCAACGTCCTTTACAAGAAGGTGAAGTATTCATGATTGAGATCACGGAC
AGTAAAGATGGATGGTCTGGTAATTTGAGGTGTGGTATCACACTGCATAA
CCCCGAGG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_039019	XLOC_039019	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00062255-protein	TCONS_00062255-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_362	supercontig	scaffold_362:489670..503055 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.70253	0.685077	0.39772	0.389107	0.4737	0.374324	3.52913	3.3823	2.36802	0.733298	0	0.789764	1.16808	1.69828	3.19136	0.856203	4.48278	4.59471	0	0	1.01887	0.993936	0.402753	1.09848	1.88569	1.68293	0.963307	1.1686	0.779753	1.58889

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR006573	NHR_dom

Blast

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BLAST of TCONS_00062255 vs. Swiss-Prot (Human)
Match: NEUL2 (Neuralized-like protein 2 OS=Homo sapiens GN=NEURL2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.735e-26
Identity = 82/260 (31.54%), Postives = 125/260 (48.08%), Query Frame = 3

Query:  186 TMFHLNQEHGINIQLTDNCTVATRTESFSNALVFSQRPLQEGEVFMIEITDSKDGWSGNLRCGITLHNPEEIT-IPQYLLPDLSRLGKSCVFSIR------PSTSDPFNNLEATXXXXXXXXXX----XEVHLKYFDSVGRSEKATHSIHPKLLVNHNFKDLKPCDTGSRIGFFISP----GRELFFIINGIQYGPCAGQIPINGPVYAALDLYGMTSQIKIVNC--NVPSLLT-SGMQAARVSFDRKCITEQNLPRDLK 911
            T FH  + HG NI++  + T ATR ESF++ + FS+ PL  G+VF++EI + + GW G+LR G+T  +P  +  +P++ LPDL  LG + VF+I       P    P     A ++             +  +     VGRS    +S     L   N   L P    SR+G    P      ++  IING   GP A  +P   P+YA +D++  T  +++V     +PSL T   +   R    R  I   +LP++LK
Sbjct:   24 TRFH--RVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTALDPASLAPVPEFSLPDLVNLGHTWVFAITRHHNRVPREGRPEAEAAAPSRPPTLLVEPYLRIEQFRIPRDRLVGRSRPGLYSHLLDQLYELNV--LPPTARRSRLGVLFCPRPDGTADMHIIINGEDMGPSARGLPAAQPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIQRSMVHRLAIDGLHLPKELK 279

The following BLAST results are available for this feature:

BLAST of TCONS_00062255 vs. Swiss-Prot (Human)

BLAST of TCONS_00062255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NEUL2	2.735e-26	31.54	Neuralized-like protein 2 OS=Homo sapiens GN=NEURL...	[more]

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TCONS_00062255 (transcript) - C. hemisphaerica