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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062194 ID=TCONS_00062194|Name=TCONS_00062194|organism=Clytia hemisphaerica|type=transcript|length=318bp
CCGTGAATCGCGTGTCATGTTATTATTAGAGGACTTAAGTGTAGGAAAAG
CTTGTGTCCGACGACGTTTCTTCGGCGAGTCGCTATTGCTCCCACCGAAC
AGTTTCTCAAAAACTGGATAATCTTTTCGGATGTCTGACATCAGGTCTTC
TTCGCTAATACCATCTTTGGAGACTTCACTGCACGATGTTGAAAATGAAT
TCAGATTGTGGTGATCTGCAACTTTCTCATAACACGGTTTATCATTGACA
TCATTTTCATTTATCGAGTCCAACGATTCTTGAGATGAAAGCAATGTcga
ggcttcaaaaatctaaat Run BLAST on NCBI transcript from alignment at scaffold_362:612991..614422+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062194 ID=TCONS_00062194|Name=TCONS_00062194|organism=Clytia hemisphaerica|type=transcript|length=1432bp|location=Sequence derived from alignment at scaffold_362:612991..614422+ (Clytia hemisphaerica)
CCGTGAATCGCGTGTCATGTTATTATTAGAGGACTTAAGTGTAGGAAAAG
CTTGTGTCCGACGACGTTTCTTCGGCGAGTCGCTATTGCTCCCACCGAAC
AGTTTCTCAAAAACTGGATAATCTTTTCGGATGTCTGACATCAGGTCTTC
TTCGCTAATACCTAAAGAAAAACAGACCAGAAAAATGTacactacagggt
gtccggaaaaaagtatcgagtcgtaccacttctatagaaagaaagttcct
gtgcgtgtttcactaaatttgtaatgtttatcaaagtttctctctgcgtc
atgagacatcttttatgaataacttttacaaaaaacaattctcaataact
ttaacgtcatgaaaattgtaaagaaagttaattctttttgtcgtaaaaac
aattattgtgttggTATGTATCTTCTTACATTATGTTAAACACACGCAAT
AACCTTCTACTGAGAATCATGTTCGTATTTATGGATTATCTTCGTCTATC
TAAAATTCACTGATTATCAACTGCTAGTTGAGAATAGCGCTCCACGTTAT
AAttaattcaacaaaaaattgTACGGGTTCCAATTTCACAGctcatttcg
aattgatttgaAAGCCGTGGAAGTTATcacctttcttttgatattgtaaG
TCTTAATCAACGTTCAAGAGAAAATTAACGCATAGGAGGATGGGATTGCA
AGTCCTACAaacaaataagtttttttttttttattagattcACCGCGGTG
AAAAACATATTGCATGACATACTGTTTTAATTAGActagagtcgtttata
atgcgtgtaatacagtagtataggcgggcgttgtatgataatacgattat
tgttacgggatttagtttgtataaacaaaactaaaattgttccctccatt
attttttgctttatttctactatatctaaattagtcgtctagcttgctag
actatgttttaaaaggaaaaatgCTTTCCACCACCAAGAGTGCTTGGAAC
GTTCTGAATGtatgagacattttttaaaaagcttcgGACACTCAAGGTAA
GTGAACAACCGTAGGGACGACTATTTAGAGTAACCTTTCTGGCTTCCAAA
AGAACACTGTAAAGGCCGATAGGTGAAAaggtgcactttatagtttaaac
agtaagaaaaccagattcttttttagaaaaaaaacattggaGGGGCAAAT
ATCTTACCAAAATGAAGTTGAAAAAGTTACTAATTATTTAATAGCGTTCT
AAATCATGGTTTCACGCTTACATACCATCTTTGGAGACTTCACTGCACGA
TGTTGAAAATGAATTCAGATTGTGGTGATCTGCAACTTTCTCATAACACG
GTTTATCATTGACATCATTTTCATTTATCGAGTCCAACGATTCTTGAGAT
GAAAGCAATGTcgaggcttcaaaaatctaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062194-exon-scaffold_362-1491911889:612991..613147 | TCONS_00062194-exon-scaffold_362-1491911889:612991..613147 | Clytia hemisphaerica | exon |
| TCONS_00062194-exon-scaffold_362-1510915933:612991..613147 | TCONS_00062194-exon-scaffold_362-1510915933:612991..613147 | Clytia hemisphaerica | exon |
| TCONS_00062194-exon-scaffold_362-1575043694:612991..613147 | TCONS_00062194-exon-scaffold_362-1575043694:612991..613147 | Clytia hemisphaerica | exon |
| TCONS_00062194-exon-scaffold_362-1491911889:614262..614422 | TCONS_00062194-exon-scaffold_362-1491911889:614262..614422 | Clytia hemisphaerica | exon |
| TCONS_00062194-exon-scaffold_362-1510915933:614262..614422 | TCONS_00062194-exon-scaffold_362-1510915933:614262..614422 | Clytia hemisphaerica | exon |
| TCONS_00062194-exon-scaffold_362-1575043694:614262..614422 | TCONS_00062194-exon-scaffold_362-1575043694:614262..614422 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_362 | supercontig | scaffold_362:612991..614422 + |
Blast
The following BLAST results are available for this feature:
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