TCONS_00062359 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062359
Unique NameTCONS_00062359
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length952

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062359 ID=TCONS_00062359|Name=TCONS_00062359|organism=Clytia hemisphaerica|type=transcript|length=952bp
ttttgtttttggtaACAACAACAGattttattaaaaggcACTAAATAAGA
ATTAAACATGGCAGCTGAATCGGAAGAAATACCTGGTTTCGAATTTGAGG
CGTATAACCCATTTGCAATTCGAAGTAATTCTGCCTTAGTAGAATATTGT
CGTGCATTTTTAGCATTTGTTTCTGGATCAGCGGCTGGCATTCTTGGATT
AACTGGATTGAatggttttttcttttatatgaTTGCGTCAATCTTTATGT
CTGTATTGTTAGGACTGAAAACTCAGTCACAATGGGATCGATATTTCTTA
TCTAAATGGCATGTGTGGACAAATGGTATTTTTGGTGAACTGTTTACTTA
TCTTTTAGTATGGACATTTATGTATGGTATTATTCATGTGTTTTGATTGG
ACGATATACAATTTTATCGAATTTATAGTTAAtacctttgaaaattgaat
cattCATATAACTTTTGGCTACATCATTTAAAACATTCTTAGATTGGTTG
GTACGAAAATCAGAATGAaagtgagagaaaaaattagttGCTTTTTTTAA
TTGCATGCATTTTTGTCGTTGCAGTGTGCAATATAAAACTAGTAACACTG
GAGCTGAATTATCATGAGATATGTGATAAgatttataatttttcaaaata
tttagaattttaagtttttgtaaattattttattatattttactACAACT
TATTAGATGATCATGGGATAATAGACTCCAGTTGTAGTTGATCCATATTT
AGTATTTGGAAAATACCTTTAGAAAAAGTTCTCATTTTCCCCCTGACATT
AGGAAAAATCCCCTTGCCCCCTTGACTTCTGCCTTTTTTTGTTATTCTCC
AAATCATAATTGTTTTTGGAATGGCTTAAGCCTATTACTCTCTGTGTATA
AAATCATGGCTTAGTAAGCCAGAGTAAGCTTATCATTTAGGCGCACTCGT
GA
Run BLAST on NCBI

protein sequence of TCONS_00062359-protein

>TCONS_00062359-protein ID=TCONS_00062359-protein|Name=TCONS_00062359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=112bp
MAAESEEIPGFEFEAYNPFAIRSNSALVEYCRAFLAFVSGSAAGILGLTG
LNGFFFYMIASIFMSVLLGLKTQSQWDRYFLSKWHVWTNGIFGELFTYLL
VWTFMYGIIHVF
Run BLAST on NCBI

transcript from alignment at scaffold_363:173404..183528-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062359 ID=TCONS_00062359|Name=TCONS_00062359|organism=Clytia hemisphaerica|type=transcript|length=10125bp|location=Sequence derived from alignment at scaffold_363:173404..183528- (Clytia hemisphaerica)
TTTTGTTTTTGGTAACAACAACAGGTTAATTTTACTTCTCAGTACTGAAA
AAGAAGAAGATGATGACACTTGTTCAGACGATCTCAATCGAACGAAATCA
ACGATCGAACCAGTCAAACCAAATCGAATGCAATCAACATATTGAAATTC
GATTGTTGAACGCAATCGAATATCAATCGAACGTCAAAATTCTGGGTAAT
ATTCGACTGGTGGTTCGAACGACCCACGGCATGGCCCGAACATGTTCGGG
CCTCTTGATTAATACTTTTTTAAAAATGGCCCGCGCGTGGCCCGCGCGGG
CCCGCGCAGTTTCGGACCATGTTCGGGCCAGATTTTCGAAAACTTGCTAC
GATCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATATAAAAGTTAAT
CATCTATTTTCCAATTAAGTTAGGAAAATTATTAAAAAGAATGATTTGAA
TCTTACATAATATGGTCTTCTTTATATTCTTTATCCCGTTCCCTTTTCTC
GTGGTCTTTGTATATGTATCCCGTTTATATTATCCGATAGTTAACCCGAT
TTGTATTTTATCTTAGTATGTTAGGTCAGAGAATAACATTCAGTTTTATC
AACGAATATACAGTCTTCTCCTATTCGAAGCAGAATTTTTGTCTAATGAA
AATATTTAACAATGGATGATGATAAACCAGGAAAGGTAAATAAAATTAAC
ATGGCCCGAGCAAATCCGTATCAATTGTAAATACATGGCTCGAACATGGT
CCGAACAAAAATACTTTTTTGTGGCCCGAGCATGGTCCGAACAGGCCCGA
ACATGTTCGGGCCATGCCGTGGGTCGTTGGTTCGATCGTCGATTCCGTTC
TCTCGATCGATTGAGATCGTCTGGCTTTATTCTTGCAGCTTCCCAACATC
TAAGCTCTCAAACATCACAAGCCGAATGAAATTACTTTCGATTTCCCGTA
GAAATTATGCGATGAACAATCCGGGGTCAATGAATCGGCGATCAAAAGCA
ATCGAATGCAATCGAATCTCAATTGAATCTGAAAATTGCGTTCGATAATC
GAATTACAATCCGTCAATTGCGTTCAATTTGGTTCGACTGGTTCGATCGT
CGATTCCGTTNGTTATATTCGATTAAGATTTGATTGCGTTCGATAATCGA
ATTACAATCCGTCAATTGTGTTCAATTTGGTTTGACTGGTTCGATCGTCG
ATTCCGTTAGATTGAGATCGTCTGGACTTGTTAAGGCGATCATCGAAAAA
TTGTTCTATTCGCGTCACCCGCCCGTATCAAATTTTCCTCTGATTTTCCG
GTGCGGAGATGCAGAAAAAAAAGTGGGAAAAGCAATTTGTTCTTTTAAAG
TATAGCTTTTTTCTCAATTGCTCTGACGACCATCGAAAAATTGTTTTGCT
AGCGTTACCACCCGCCCCTGAGTTACTGGCGTGATTAAAGAAAAACCAGG
AATGTTTTTGACCGCCCGTCCGCCCGCATGCATTTTTAACACCCGTTGTG
ACGCGAACAGAGCTTTTTTTCGATGACCGCCTAAGGGGTCTTCGACAAAA
AACTTTTGAAGTTTTTATCGGCATTGGGCCGATAAGCTTCAGACCCCCTC
CCCCCCTTACTCTTATTGGCCAAAATTTTTCAAATCCAACTTTCACATCT
TCGAAAACACAATTTCCTCCAATCTTGTCCGTCATCGCCTTCCCACCCGT
CATCGTTGAATTTTTGTCTATTTGTGCACCAACATTGAGTTTGTTCATTA
CCCGCATTGATATTGTTAATCAAAACAAAAGNCTGGGCCATGACCCTAGA
CAGTTCTAGTTCACAAATTTTATAAGAACTGGAAGTGCGTGGTGAGTCTT
AGGGGCCATCGTACATACCCGCATTGATATTGTTAATCAAAACGAAAGTT
AAAATGACAGGATGAAGTCGCAACATTTCGAAGGAAAAGGCAGCGCTGGC
CAATGAAAAAAGAGTTTTTTATCAAAGATAGTTCAAAACTGTACTTTTAA
AGCTGCGAATTTGCGCGCAAAGGTGAAAGCAAGTGAAATCATATGCTTTC
AGTGGAGTTTGTGGACGAAATCAGAAAGAAAGAAATTGGCTGAAAGGATT
TTCGTCTCAATACTTGTTTTTTTATCAGTATGTAGTTGGACCCCCCCCCC
ACCCCCTTATCGGCCCAATGCCGATAAAAAATTTGAAAGTTTTTTGTCGA
AGAAGGAAGGAAAAGGCAGCGCTGGCCAATGAAAAAAGAGTTTTTTATCA
AAGATAGTTCAAAACTGTACTTTTAAAGCTGCGAATTTGCGCGCAAAGGT
GAAAGCAAGTGAAATCATATGCTTTCAGTGGAGTTTGTGGACGAAATCAG
AATGAAATTGGCTGAAAGGATTTTCGTCTCAATACTTGTTTTTTTATCAG
TATGTAGTTGGACCCCCCCACCCCCTTATCGGCCCAATGCCGATAAAAAA
TTCGAAAGTTTTTTGTCGAAGATCCCTAAAGAAGGGGGTGCACAGGTGTT
TGCCGCAAGCAAAAGTTGGTAATGCAAAGTCTCACAAAATTGCATTTAGC
AAACGCAAAAAAAACTCCATAATGGCGGCATCATGCGAGAGAGCAATTAG
AATACAAAATAAACTAATTTCAAAGGCTCATTGTAAGTGATTGAGTAAAG
CTATCATCAAAAAATAAAAATAAAACAAATCTTTAACCTTTCAATAATCC
AAATAAACAAAATATTTCAAATAAATTGATGTTTAAGTTTGAAAACAAGC
ACCATTTCCACCATACACTTTTAGAGCAAAAAGCAGCATTTCGCTGAAAT
CTGCTGCTCTTCCCGGGCAAATANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTAAACGCGTTTACGGCAATGTTTATTCTTT
ACACTTTCGTTTTCAAAATCTGTTGAACATGGATTTTGGCTTGTGACGAT
TACCTCGCGTAACATCTGTGGGTGCCCAGTGCACGAACGGCAAACTTATT
TTTCTCTTTTCTCACTTATATACTTTTGGTTTTTACATAAATCCTTTTCG
ACCATCTCGTAACAAGCTTGAAGTCCTTCTTTCAGTTAGTCACACTATCC
AGCTTTCAGAAAAAACAATATCAGTCATCTACAGGATGTATTTGAACAAC
AAGAATGAGAGTTACCTGAATCAAGTTTGCAAGACAATTAAAATAAAACT
TGAAAGTTTGAAACAAAATAAAACGTGCAGCAGCCAAAATCAACCAACCA
AAATTTGGCCGTTCGCAAAAAATACCTTGGTTCCCGACATTCCAACCATC
AAAAAGTGGGTCGGTCTGGTGGGCGAAAGATATTTTCTGTTTGAACGAAA
CAGTTCAAGAGGGCGGAATTTTCCTTAGAAAAGGGTGATAAACGAACGTT
TGATCGCCCTAGAAGCCTCTTTTTCACTTCACAAAAGCTCCGCTGGTTTG
TTTTGATGCTTCCATATGGTCCGCAATGAAAAATCGGACTTGGAAATTGG
GAAAAAACAGAACTAACAGGTTTCGAATTGTTCTTTTGGGCGAGATTAGC
GTTTGCTCTTTCTCTCAAAAGAGAAAACATAGAGGGTGATGGTGGAGTTT
CAGCTGTCAGGAAAAATGGTTTCCGACTCTAATTTTTCAGTAGAAATCAC
GGTCGGTCAGGTGACGGGGAGCAAACAATTTTTTACGAACAGCCTTTGTC
ATTCAATTCCCGAGACAGCTTGTTTATATGGTAAAGAAAAAACAATTCCG
CACATGTAAATGGGTCAGTGTTTGATGTCCGGCAAAATTTCCGGTCAATA
GCCTATCCGGCAGTGCGCAGATCTAGGTGGGTTCCGTCTCCCCGTAGATC
TTTTTTCTTGGGAAGTTGATCTTCAAATTAGTTTTCAAGGTTGGCTTGGC
TCAAATTTTTTCATCTATGGCTCAACTTTTAGGCAATTTCTCAATGTTTT
TGAAAATGTTAATTTCATTAAAAAGTGCCGGGTTATTTTTTCATGAATCC
CTTTAGAAGTTTTGCGGCGCTCTTTTTTGCTTGAGAGTCAGATAAACAAT
ATAGCGCTTTCGCAGCATTAATCTTTGATATGCATTTTGGCGGGACGCTA
GTGTGACTAACTGTCTTTCAGTTTGTTTTCACTTTATTTGAAGGCTTCTT
CTTGGAATAATAATTCGTTAAAAAGCGAGCGCTATTCGGACCCAGTCCGC
GAACGAGGAACCAGTGCGCGAACGATCTTTTGAAAGAAAAAATTAGAGCT
TCGCTCGCAGGTAATACTTTAACTCTCTTCCGAGATGATACAGGGGTATT
GAACTTTTCAAAACCACGCGTTTTTTCACTAAAAAAACGTCTTTTCGTCT
TTTTTATAAGAGCTTTAGCGTTTTACTAACCTGTTATTTTTGTAAATATT
TTCCTGTCGTTCATTTTTTTGTTTTCTTTTTCAAGTTTTGCTCATCGAAA
AGCATACAGTAGTGTAGTGTCTTCTTTTTTAATTGAGATCGCCAGTGCTG
TTGAATGTTTTGACGTTGCAATGTCTTCATTTTGAATATGGTGAAGTTCG
GATCGTTCGCGGACTGGAACCTTTTTTATATCAACTACTGGTGATATTTT
TCTTTTCTTTTTTAAAGTTTGTTTTTGTTTTGTTTTGAAAGTGGCAGTCT
ATGGAGAGTCTTCATTTGATAAAAACGTGGGAATTTTTTATGTCTACCCG
AAGATTCAATATACCGGTTTCCTTTGTTATTTCAATCCGGAGCTAGAAAC
TTTGCATTGGAATTGTCAAGTTAAAGACCGCGGGCATGCCCCTTGAATGT
TTTGATCGCAATGTAAAGTCTTCTTTTTTTTCTCAGCATCTGGAATGTTT
TGATCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTTGGACAAGTATTTTTTGGAGTGGCAGTT
CAAGCATTTTTTCTTACAAAGCTTTTTTGTCCACAGGTAGCCATTTTTTA
TTTTTTTCGAAAAATCCAGCTTTTTCGTGTGCTTCCGTGCAAAGTTGGAT
CTTTCAGATTCTACTCGTTTTTGTATGACTTTTCTGGGTTCAAAGACGTT
CGGTTGCCAACTAGACCCGTCGCCAACTGGGCAGGGGACTCTATATGGCA
ACCATCAATAATATATGAGGACCTTTCCGATGCTCCGGAAACGTCCGCAG
CAAAATTTGCTGTTTTTTCGTGCTCTGGAACACCGCAAGATATCTTAGAT
ATAATTACAATAGCGCTCGCTGTGCTGATCATGTGAAATAAAACTAACTG
CGCATGCGCATATTTTTTAAAAATCAGCCGACTCATGGTACAGTAGTGAA
ACCTCATGTTAACATGTTAAAAATCACTTGCTCTGGAAGCACCGGAAGAG
CTCTGGAACTTTCCGGTGAGAAAAATAGTGTTTTTTTAGCTGAGCACCGG
AAGGGTCCTAATATATGTTCTTTTTGTGCAGCCCAACCGACACTCACCTT
TAAAACATAAATCTCGAGTCGGCCCAGCCGCAATAATCAGTGAAGCTGAT
ACTTCGATATTCCAAGATTAGAAAAAGCTATATATACCTGTTAATTTTTT
TTCTTTAAAGAATCAACAAGCCATCAACATCAATAAATTCCACACATTTC
CTCATCAGAAACTTTTAAAATTATCTGCCATTATGACTTTCTGAAGCCAT
TCCGAAATTAACCAATCGAGTTATGTATTGGAATTCCTATGGTAGTTCTT
TTCCGATATATGTAAAATAGCTGCACAGGGGTTTGAGGAAAAAACAGAAC
TACCATCATTTGTTTTTTTTTCAGCCATATATTTAAATTTATGCTATCAC
ATGCTTGAAATAAATAAGTAAATAATATTAAATATACTATCTGTATATTT
CAGANTTTTGGACAAGTATTTTTTGGAGTGGCAGTTCAAGCATTTTTTCT
TACAAAGCTTTTTTGTCCACAGGTAGCCATTTTTTATTTTTTTCGAAAAA
TCCAGCTTTTTCGTGTGCTTCCGTGCAAAGTTGGATCTTTCAGATTCTAC
TCGTTTTTGTATGACTTTTCTGGGTTCAAAGACGTTCGGTTGCCAACTAG
ACCCGTCGCCAACTGGGCAGGGGACTCTATATGGCAACCATCAATAATAT
ATGAGGACCTTTCCGATGCTCCGGAAACGTCCGCAGCAAAATTTGCTGTT
TTTTCGTGCTCTGGAACACCGCAAGATATCTTAGATATAATTACAATAGC
GCTCGCTGTGCTGATCATGTGAAATAAAACTAACTGCGCATGCGCATATT
TTTTAAAAATCAGCCGACTCATGGTACAGTAGTGAAACCTCATGTTAACA
TGTTAAAAATCACTTGCTCTGGAAGCACCGGAAGAGCTCTGGAACTTTCC
GGTGAGAAAAATAGTGTTTTTTTAGCTGAGCACCGGAAGGGTCCTAATAT
ATGTTCTTTTTGTGCAGCCCAACCGACACTCACCTTTAAAACATAAATCT
CGAGTCGGCCCAGCCGCAATAATCAGTGAAGCTGATACTTCGATATTCCA
AGATTAGAAAAAGCTATATATACCTGTTAATTTTTTTTCTTTAAAGAATC
AACAAGCCATCAACATCAATAAATTCCACACATTTCCTCATCAGAAACTT
TTAAAATTATCTGCCATTATGACTTTCTGAAGCCATTCCGAAATTAACCA
ATCGAGTTATGTATTGGAATTCCTATGGTAGTTCTTTTCCGATATATGTA
AAATAGCTGCACAGGGGTTTGAGGAAAAAACAGAACTACCATCATTTGTT
TTTTTTTCAGCCATATATTTAAATTTATGCTATCACATGCTTGAAATAAA
TAAGTAAATAATATTAAATATACTATCTGTATATTTCAGAAAATAAACAC
TATCAATTTGAAATAGTTTATCATTGTAACACCCGCCGTATTTGGATCAT
TCTATTGTGGGCGCAAAATAAGGTGGAACTAAGTCGGGCTTCCTTGGTCT
TTTTAAACATTAGTTCTGATAGAATAAAAATATAACCTGATCAACACAAC
CAAACCTTCTGTCTTGCGTTTACTCTTTCTTTCCCAACAACTTTTGTTTT
TGCTTATGTAGGTTTTAAAATCCACAAGTAATGAACCTCTTATAGTTTTA
TCTGAATAAATCTTCTTGAAAACCTTCTGTCAGGTTTCATTCCGTATGTT
TTTTATTCACATGGTGAACCAATTTCCTCGATTTCCTGATAATTGAAAAT
TGGAACTTTCCNGTTCACATGGTGAACCAATTTCCCCGATTTCCTGATAA
TTGAAAATTGGAACTTTCCCGTGGGCACGATTGGGCATACTGCCATTGCA
AAATATTTTTCATGAAAATTTACGCTAATATAATCTTACATAGAATACAT
CTCTTAAATTTGACTCTTTTGCTCGTATTTCTAAATTTATCGATGAAAAG
AACTATCTATAAATTATTTGCTTAAACAGGCGTTGAATCGATATTGACAT
ATTTAATGATGTCATAATCAATGCCGTGCATATTTTGTCAAATATCACTA
AAATATACAAGATAAGTAAACATATAAATTTATTGCCTGCGAGCACGGCT
TAGCGAAGCGCACCTCTCTTATTCATTATCTAAGAATTGAAGCAGGCAAA
GATTACTGTGCAGGCTGATGGCGGACAAAGGTTATTTGAAGATATATTCA
GTTATAATCCAAGGTAGAACAAACTAAACATGGAAAGGGGGTATTTTTCA
GTGCTCTATGCGATGATCGGAATTTTTTTTGAATTCTATGTTTAGATTTT
TCTACCCAGCCCCGTTGCTATGTACGCGTGTCCTGTTGCTAAGACCTTTG
CTTGAAATCGAAAGCAAAACCAAAATAATTTAATCGATAAAGTGAAAGGA
CTGACTGTAAGTATTCCCATGTTTCTTTATGGCTGGGGATTTGAATTCCA
TTGTTTTCGAGCCAGAAAATCCAGTAGGGACTGGTAGGGATGGAAAAAGA
GCACATATGACATTTAGAGGCTCCATCGGGGGTTTGTAAGGTACAAGGAC
GAATTAATTTATGGTGCTTAATGGAGGGGGATGCTTATGGAGGAAATATT
TGAGAGTCATTCACACAGATTCACATACTTTTGGGTTGTATTTCCATTGC
TGTAATTTTTTTTTACTAAAATAACAACGCCCTTCTTTGTTCTTTAGATT
TTATTAAAAGGCACTAAATAAGAATTAAACATGGCAGCTGAATCGGAAGA
AATACCTGGTTTCGAATTTGAGGCGTATAACCCATTTGCAATTCGAAGTA
ATTCTGCCTTAGTAGAATATTGTCGTGCATTTTTAGCATTTGTTTCTGGA
TCAGCGGCTGGCATTCTTGGATTAACTGGATTGAATGGTTTTTTCTTTTA
TATGATTGCGTCAATCTTTATGTCTGTATTGTTAGGACTGAAAACTCAGT
CACAATGGGATCGATATTTCTTATCTAAATGGCATGTGTGGACAAATGGT
ATTTTTGGTGAACTGTTTACTTATCTTTTAGTATGGACATTTATGTATGG
TATTATTCATGTGTTTTGATTGGACGATATACAATTTTATCGAATTTATA
GTTAATACCTTTGAAAATTGAATCATTCATATAACTTTTGGCTACATCAT
TTAAAACATTCTTAGATTGGTTGGTACGAAAATCAGAATGAAAGTGAGAG
AAAAAATTAGTTGCTTTTTTTAATTGCATGCATTTTTGTCGTTGCAGTGT
GCAATATAAAACTAGTAACACTGGAGCTGAATTATCATGAGATATGTGAT
AAGATTTATAATTTTTCAAAATATTTAGAATTTTAAGTTTTTGTAAATTA
TTTTATTATATTTTACTACAACTTATTAGATGATCATGGGATAATAGACT
CCAGTTGTAGTTGATCCATATTTAGTATTTGGAAAATACCTTTAGAAAAA
GTTCTCATTTTCCCCCTGACATTAGGAAAAATCCCCTTGCCCCCTTGACT
TCTGCCTTTTTTTGTTATTCTCCAAATCATAATTGTTTTTGGAATGGCTT
AAGCCTATTACTCTCTGTGTATAAAATCATGGCTTAGTAAGCCAGAGTAA
GCTTATCATTTAGGCGCACTCGTGA

Coding sequence (CDS) from alignment at scaffold_363:173404..183528-

>TCONS_00062359 ID=TCONS_00062359|Name=TCONS_00062359|organism=Clytia hemisphaerica|type=CDS|length=339bp|location=Sequence derived from alignment at scaffold_363:173404..183528- (Clytia hemisphaerica)
ATGGCAGCTGAATCGGAAGAAATACCTGGTTTCGAATTTGAGGCGTATAA
CCCATTTGCAATTCGAAGTAATTCTGCCTTAGTAGAATATTGTCGTGCAT
TTTTAGCATTTGTTTCTGGATCAGCGGCTGGCATTCTTGGATTAACTGGA
TTGAATGGTTTTTTCTTTTATATGATTGCGTCAATCTTTATGTCTGTATT
GTTAGGACTGAAAACTCAGTCACAATGGGATCGATATTTCTTATCTAAAT
GGCATGTGTGGACAAATGGTATTTTTGGTGAACTGTTTACTTATCTTTTA
GTATGGACATTTATGTATGGTATTATTCATGTGTTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039073XLOC_039073Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062359-proteinTCONS_00062359-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062359-exon-scaffold_363-1575043694:183505..183528TCONS_00062359-exon-scaffold_363-1575043694:183505..183528Clytia hemisphaericaexon
TCONS_00062359-exon-scaffold_363-1575043694:173404..174331TCONS_00062359-exon-scaffold_363-1575043694:173404..174331Clytia hemisphaericaexon
TCONS_00062359-exon-scaffold_363-1510915933:183505..183528TCONS_00062359-exon-scaffold_363-1510915933:183505..183528Clytia hemisphaericaexon
TCONS_00062359-exon-scaffold_363-1510915933:173404..174331TCONS_00062359-exon-scaffold_363-1510915933:173404..174331Clytia hemisphaericaexon
TCONS_00062359-exon-scaffold_363-1491911889:183505..183528TCONS_00062359-exon-scaffold_363-1491911889:183505..183528Clytia hemisphaericaexon
TCONS_00062359-exon-scaffold_363-1491911889:173404..174331TCONS_00062359-exon-scaffold_363-1491911889:173404..174331Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_363supercontigscaffold_363:173404..183528 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
86.1865	82.038	43.7188	32.8407	26.2177	11.7602	21.0818	16.8043	27.2155	22.7631	17.9149	16.6099	11.7048	8.20318	14.664	15.3658	16.5258	18.2117	7.10234	8.99434	29.0673	29.7784	80.1171	69.6613	3.22986	8.11307	26.1173	20.5459	47.8451	45.5548
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029008Rab5IP_fam
Blast
[Close]
BLAST of TCONS_00062359 vs. Swiss-Prot (Human)
Match: EMC6 (ER membrane protein complex subunit 6 OS=Homo sapiens GN=EMC6 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.970e-24
Identity = 56/114 (49.12%), Postives = 82/114 (71.93%), Query Frame = 1 
Query:   58 MAA--ESEEIPGFEFEAYNPFAIRSNSALVEYCRAFLAFVSGSAAGILGLTGLNGFFFYMIASIFMSVLLGLKTQSQWDRYFLSKWHVWTNGIFGELFTYLLVWTFMYGIIHVF 393
            MAA     E P F  EA    A+R N+A+++YCR  ++ +SG+ AGILGLTGL GF FY++AS+ +S+LL LK   +W++YF S+  ++T G+ G LFTY+L WTF+YG++HV+
Sbjct:    1 MAAVVAKREGPPFISEA----AVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110
The following BLAST results are available for this feature:
BLAST of TCONS_00062359 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EMC67.970e-2449.12ER membrane protein complex subunit 6 OS=Homo sapi... [more]
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