TCONS_00062481 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062481
Unique NameTCONS_00062481
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1657

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062481 ID=TCONS_00062481|Name=TCONS_00062481|organism=Clytia hemisphaerica|type=transcript|length=1657bp
tgagtccattTTTAGAATATTCTAGACCGTAGTACGCTCAAAGTCAAACG
TACACTCCATAGTTTTCGCCCAAAAAAATTCTCCCCGCCGCCGTCCCCAG
AAATACTTTCGCAGGAAAGGGATAGTAATTTCCATCATTTATCATTGTTA
TTAATATTTCACCCTTTCTATCATTAGATGTACACTGGCTACTGGGTTTC
CAACTTTACTACAATGGAAGAAATTGCAATTGACAATCTGCATTATTTAG
GATACAAACCAAACGGGGATCAATTGATTTTAGATACCGAAGAAAAACCT
TCCTATGAAGCAAAGACGGGCATTTGCGAAAGAGAAAAATTGcaagaaag
aaaagataaagATGATGATTTCAACATACGAAAAGAAGATTTTACATCTA
ATCATAATCACCACATACAACAACAACCCCCTCATGTGAACCAACATCAG
TCTTTTCAAACTCCTTCAAACATGGACCATCATTCATCTAACCATCCTCT
TAATCGAGAGAATCCGCAAAAACCAACTGGCATCAGTCTTTATGATAATC
AACAACAGTCGCCAACGTATCCGTATTCTTCAAATGGACAACCACATTCA
AATCTACCACAAAACCAAGTTCGACCCATTGCTTATCCCCCAAGTTTGCC
TCAAGGACAACAACCCTTTGGAAACCTAACACACCAACAATATTATCAGC
CTCCGTCCTATCAAAACCCAGGCCTTCAAGCCACCGAACCTCAAAACTTC
CATAATTCTAATCTGAGTAATTATGGAAACACTCACCCACAGTCAAATCC
GACTGGTCATGATTTATATGGTGACGCGCTTGACGATTTGAGAGAAACTG
AGGCAGACACTGCCAGTCCGCATTCAAGTGAAAGACCTACGCACCATCAA
AGAGGTGATAACGTCAATCAACAAATGCATGGGTACTCCGCGCAACAAAT
GGACCATAATGCCCATCAACAAGGTGGTATACCTCCCAATCAACAAATGC
AACCAGCAAGACCGGTACCCAAACCAAGACGGAACCCCCCAGCAAATTTA
GGAAATATGCAAAATAATCCAGATTCAAATTTCAGTACAAATGAGATAAC
TGAAGAGCCTACCTTTGTTCCTTAGTTTGATTTCGCCGCACATTTTCTCA
ATCACGTTTTAAATGAATGACTTCTCGTATGTTATGCACCCAGTAATTCA
GTGTTTATGCGACGGAGAAAGTGGTCTAAGCATAATTTCACTTGGAATAC
ATGCCGTCGTATGGCTTTCTTTTAAATGGTTTGCTTCGAAGGGACCCGTC
GCAAAACGGGCTGGCGTAATACAATGGATTCTACATTATTTGGAAAACTC
GTGTCGAATAGAAACTTAAATACAAAGGTTCGAGAGAACTCATTCGCATT
GGAGTTAAGAGACATTTCAGAgCCATACAGTATTGACTCGTTCAACGTCA
AGAGAAGGTTGGTACTTCTGAAGTGGATggtcatcaaattttatcagaTG
GTTAAAGACCCATTTACATTTACAAATAATACGCCCACAGTAGACAACAA
AGTCTTcattatttgtttacatttatttCGATGAAATAATAATtgaatca
ttttctttttgaaatattttcttgctCCTTTTAACTTCCTTGTAGCTATA
TCCTTGT
Run BLAST on NCBI

protein sequence of TCONS_00062481-protein

>TCONS_00062481-protein ID=TCONS_00062481-protein|Name=TCONS_00062481-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MYTGYWVSNFTTMEEIAIDNLHYLGYKPNGDQLILDTEEKPSYEAKTGIC
EREKLQERKDKDDDFNIRKEDFTSNHNHHIQQQPPHVNQHQSFQTPSNMD
HHSSNHPLNRENPQKPTGISLYDNQQQSPTYPYSSNGQPHSNLPQNQVRP
IAYPPSLPQGQQPFGNLTHQQYYQPPSYQNPGLQATEPQNFHNSNLSNYG
NTHPQSNPTGHDLYGDALDDLRETEADTASPHSSERPTHHQRGDNVNQQM
HGYSAQQMDHNAHQQGGIPPNQQMQPARPVPKPRRNPPANLGNMQNNPDS
NFSTNEITEEPTFVP
Run BLAST on NCBI

transcript from alignment at scaffold_365:148152..157450-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062481 ID=TCONS_00062481|Name=TCONS_00062481|organism=Clytia hemisphaerica|type=transcript|length=9299bp|location=Sequence derived from alignment at scaffold_365:148152..157450- (Clytia hemisphaerica)
TGAGTCCATTTTTAGAATATTCTAGACCGTAGTACGCTCAAAGTCAAACG TACACTCCATAGTTTTCGCCCAAAAAAATTCTCCCCGCCGCCGTCCCCAG AAATACTTTCGCAGGAAAGGGATAGTAATTTCCATCATTTATCATTGTTA TTAATATTTCACCCTTTCTATCATTAGATGTACACTGGCTACTGGGTTTC CAACTTTACTACAATGGAAGAAATTGCAATTGACAATCTGCATTATTTAG GATACAAACCAAACGGGGATCAATTGATTTTAGATACCGAAGAAAAACCT TCCTATGAAGCAAAGACGGTAGCTATTGATTGTTTTTTGGCCTATATTTA TTGTCAGTACGTGTTTGAAATCATTAAACAAGTATACGATCTGAAGTACA GTTTTGGAGTTGCTCGAAAAATTCTGTTCAAAATCAACAATGGTGTTCTT ATTGATGATTTGAAGGGCATTTGCGAAAGAGAAAAATTGCAAGAAAGAAA AGATAAAGATGATGATTTCAACATACGAAAAGAAGATTTTACATCTAATC ATAATCACCACATACAACAACAACCCCCTCATGTGAACCAACATCAGTCT TTTCAAACTCCTTCAAACATGGACCATCATTCATCTAACCATCCTCTTAA TCGAGAGAATCCGCAAAAACCAACTGGCATCAGTCTTTATGATAATCAAC AACAGTCGCCAACGTATCCGTATTCTTCAAATGGACAACCACATTCAAAT CTACCACAAAACCAAGTTCGACCCATTGCTTATCCCCCAAGTTTGCCTCA AGGACAACAACCCTTTGGAAACCTAACACACCAACAATATTATCAGCCTC CGTCCTATCAAAACCCAGGCCTTCAAGCCACCGAACCTCAAAACTTCCAT AATTCTAATCTGAGTAATTATGGAAACACTCACCCACAGTCAAATCCGAC TGGTCATGATTTATATGGTGACGCGCTTGACGATTTGAGAGAAACTGAGG CAGACACTGCCAGTCCGCATTCAAGTGAAAGACCTACGCACCATCAAAGA GGTGATAACGTCAATCAACAAATGCATGGGTACTCCGCGCAACAAATGGA CCATAATGCCCATCAACAAGGTGGTATACCTCCCAATCAACAAATGCAAC CAGCAAGACCGGTACCCAAACCAAGACGGAACCCCCCAGCAAATTTAGGA AATATGCAAAATAATCCAGATTCAAATTTCAGTACAAATGAGATAACTGA AGAGCCTACCTTTGTTCCTTAGTTTGATTTCGCCGCACATTTTCTCAATC ACGTTTTAAATGAATGACTTCTCGTATGTTATGCACCCAGTAATTCAGTG TTTATGCGACGGAGAAAGTGGTCTAAGCATAATTTCACTTGGAATACATG CCGTCGTATGGCTTTCTTTTAAATGGTTTGCTTCGAAGGGACCCGTCGCA AAACGGGCTGGCGTAATACAATGGATTCTACATTATTTGGAAAACTCGTG TCGAATAGAAACTTAAATACAAAGGTTCGAGAGAACTCATTCGCATTGGA GTTAAGAGACATTTCAGAGGTATACCTTAAGGGAAGAAATTTTCGCGGAA TTTAATTTCGCGAATTTGGGTGTAATTCGCGAAATTAAATTCCGCGAAAC ACACCAAAATTGTTAAATCGCGAAATTAAATTCCGCGGAATTCGATTTTT TTCTTCTTCTTTTTTTTTGTTGTTTTTGACCAGGTATTACCAAAAAATAT GGACACAATTGATTTTTAAGCATTATAACGTGTATTTCTTATCAAATATT AACAAATATAAATAACTCCGTGATGGTTAAAAGTTAATTTAAGTTGATAA ATTCTTCTTAATCGTGAAATTAAATTCCGTGAAACTTTTGAAATCGGCTC ATTCGCGAAATTAAATTCCGCGAAATTTGCATTTTTGAAACTCTGATTCG CGAAATTAAATTCCGCGAAAATTTCTTCTCGCGAAAATTTCTACCCTTAA GGTATATAGAGACACGAGTGACTGTACTTAATTTTCCTACATATAGATTG AGTTTTGCTTTGCTTTTGTTATAATTTTTTGTATATAATATTTTTGTAGA TCATCTCTAATGAAATTGATTTTTGATTTCTTTAATTCAGGCAGTACTTA GTCATTTAAAAAAAAAACTCATATAATTCAAATGATACTAGGGGAACTTA ATTTTTTGCTTAAATTGAAGAAACGGAGAAATAATTTATCTCTTTTTTGG AATGAATCCATTCACTTTGAAAGTGCGCTCTGTTTTTGTTATTTGACGGT AAAACAATTCAGGCCCCCAGTCATAAAAAAATTGGAATATCAATCCCCAT CGACTTTTTACCCCGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTTTCC CCGGGGGGGGGGGGTACTTAGGCAAATGGAGGGTACGGTATGTGCCGCCC TTATGGGTACCTTTTTTGGACTTCCAAACTCCTGCTAAGGGTCGGAAAAA TCCGAAAATCTAATTTCAGTCCCACTAACGGTCGGAAAAATAGGAAAATT TCAACTTTTTACCCCCTGAAAGATCGAAATTTGGTCAAAATTGGTCAAAT TTGTCCCGCTAAGGGTTGTAAAATTCCCAAAATTTCCCTTGGTTTTCTCC TTTTTAGTCCCGGTAAGGGTCCAAAGTTCGAAAGTTGGGCGGCACCCCCC GGCAGCTCGTAACCCTACTACCCCCGGGCTTTTTACCGACTACCGGGTCT TTGGGAAAGGGTGTCATGTGGAAACCACGGTCAAGGAATTCACTTTAAAA TTACACTGGCATTGTTTCCAGATTGTAGCAGCTAAGAGTGCACTTAAAGT GAAATTATCAAACAACCTTTACAATTCCAGAACTTTATGAGAAATTTTAT GTATTTTTATACACGTTTTTCTTTTGTAAGAACATCCAAAATTTTTAAAG CTTTGGGATTTTCTTAACCTTTTGAGTTTTAAGCCTAAAAATGCTCTTAA CATGTTCTTTACATTTTCGCCATTTTTTGACCATTTTTACCCATTTTCCT AAGAAATCGGGTGTCTATGAGTCCATAAAGCCTTAAAATGTTCTTAACTT GTTCTTAACATTTTGGCCGTCGAAGCCTTTATAGTTTATAGTTTGTTCTT ATAAAAAACGTGAATTGAAGCAAAACTTTATTACAGTTTCAATAAATGAC TATTAAATTGAATGAACTTTAGCACGTATATTAAATAAATAGTGTTATAA TATTCAAATACAGCTTTCAAAAGTTGATTAACTGTATGTCTCGTTTTAAA ACCCTGCTTAATCAACAAGCTGCCATATTCACACGCTCGTTAAAAAAAAA CAAGTTACGCCAAGTAACATGTTTTTTCTTTTATAAGCATAACGTTTATA ACCATATGCAGGCTCAGTTTTTGGTACCTAAACAATGGCTCTATTGTTTG AGAACAATAGTCTGCTAAGCATAATGCGAGCCTGATATAGGAACAAACAC TTGCTTATAAAAAAAACATGTAGTTTTAGATACTACAGTATATACTATTT TCATCGCTTTCGGGTAATAATTTATGATTTTTTAATTCCTGCTCGGAATA AGAGCTTGGTTTTGCTTTTTGGGCTAATGAACTAACACTTCCTTTTGCAG ATGAAGTATGCAGTAAATGATTTTCTTAAAAAAGATATTCCTTTTGCGTT CTATATAATTTGTCAATATTAGTTTCAAAATATTGATTTCGATTTTAATT GAGTAGGCACACATGATTTTATTAAAATTACATGACCTAAAATTTATTAA AAATTGCGTCCTAAAAAGATAAAGGTCTATCTCATATGATAACATCCAAA ATTTTTAAAGCCTTCGGGTGTTCTTAACTTTTTTAGCTTAGTTAGCTAAA GTTTTAAACCTAAAAATGTTCTTAACGTTCTTATTTTCACCATTTTGTGA GTATTTTTGTCGATTTTTAGGTGTTTTCGAATCTGCGAAGCCTTAAATTG TTCTTAACTTGTTTTTTAATATTTTGGCCATCGAAGCCTTATGTTCTTAT ATAGTTTGTTCTTATAAGAAATGTGTTTCCCATATCTATGTCTCTTTTCT TCCTCTGATATGTTTTGCAAAGAATACTACGGTTGAAGCTGGTGTACAAT TTTGTCATGAAATTTCCCAATAATTAATTATTTGATGGGTCTTTATTTAG AATCAAGTACTCGTTGGAAATTAATTTTTTAAACATCTAATTTATTGTTA TTTTACATAAGCGTAATATACTCTATACCAATATTGAAACAACTGGACCC TACTGTCCTAAAAGCTGATTAATATTTCAAGTGGTTTTTAATAAATCTTC ATTACGTTTAAAGTAATCGCAAGTGCAATAAATATAATTTTCGTTTTTCG AAATTAGTTTTGCTGAAGTTTCTTCATTAAATAAAACCTATACTGTATCA TATATCTAAGTATATCTATCGTAAAAGTAAACAAAGAAACAACTCCCAGT TGGGTCAAACCAAATGCTTGAAAATGACACTACAATCAGCCCCTAAATAT ATTGGCAATTTTAGGTATTTTAACGTTTTTCAGAATTTAAAGGTCGGGCG AGAATTGCAGTTTAAGTACTTCCACTCTGCTTCATTGGATTTTTCGATTC GGGAGGGGTTAAATGGCTTCCAGGCTATTATTTTCAGCCTTATTGGAACA TTTTTGAGCTTTTCGATGTTAAAATTCTAAGCTCCTTTAAGTCTTAAGTC TAATGTTCAAACGCAGAGTTAGAAATCTACTTCCGAACTGTACTTCAAAG CACTTAAAAATCACTTGCGGTTTTAAAGTTTTGAGGGAATTCCCCTTTTA TGCCCAATATTTCGGCGTCGATTATAGATGTCAAATGAATAGAAGGGTCA AGGATGAAAGGGGGGTTTCAGGGAAATGAGCGACTTTCGGGTAGACAGCT TTATGAAAAGGACGCATCTGGGCTTTGCCTCGACAGTGGTCACAAACTTA ATTTTTACTTAGCCCTAATTTGTAGTTGTTTACCTTGTAATGCTATTGAT TTAAAGGTTTTGTTTTTAAATAAGAGTGATAACGTTTGCTTACTCATCAA TTTTAATTTAAAAGCTTTTTCACATTGGATTGACATGGATGTGGAGCAAG ATTGGTCAGAAAGACGAAAAGCAAAACATTTTTTGCTTATATAAGCATAA AATAGCAATAGGTAGACACTGTCCTGATATGAAATATGTGTCTGATATGA AATGGGAACACTTTAAAGTGTAAAGACTATTAAAATTTATCCTCTATCTT TCTCTACACAGGTTGCTCTATTATTTTCAGTCATTTTTTAGATAAAACCT TTTTTGTAATTGGGGAAGGCTCCATTTCCCTCCTTCTAAAGATAGGAGGG CTGGCACTAATGAGGTCTTGATTGGCCTGAATTTCGGAGAATAACGTTTT TTATAAGAACAAACTATATAACAACATAAGGCATAAGGCTTCGATGGCCA AAATATTAAGAATATTTTTGAGGCTTTGCAGACCATAAAACACATTTTCG TAGGAAAATGGACAACAATACTAGAAAATAGTGAAAATAAGAACGTGTTA AAAACACTAATTTGAGGCTTGAAACTCGAAAAGTTAAGATCATCACAAAA TTTTGGGATGTTCTTATAAACAAGTGTAACGCCATCCCGAAAAGAAACTT AATCGAAATCTAAGGAAATTATTGGCCCTATCTTGCATATATTTGTTCTA GCCTGTCGCATCTTAAAATATATCATGTTTGATTGAAAAGTAATTTCATG TTGAGGTCCTATTATTATTATTTCAATTTTGAATAAAAACATGAAAATCA GCAGGCAGACTTCTTTGATTGCTTGAAATATAAAAAATTGTTTATCACAA TAAAATAATAAATATTTTTGATCCTCTATACGACATTTTGATGAACCGTA CCCTCAGTGCAATGGTTGTGAACCAACTTTGAATTAGAGTCTCCACGATT TTATGTGGAGGTCCTATTATTATTTCAATTTTGAGTAAAAACAATCAGCA GGCAGACTTAACTTTCTTCACTCTATGAAAAACAGACTGAAGAATTTTTT GTAAGAATATTATTTGACTTTACAGACTCTACCAGAGTATACTAATTGTA GCTGTAAATTGCACCTCAAAAAGTTCATCAAATACTCACAAATTCATGAG GATGAAAGATAAATTTAAGACCAAAAGGACACACCTGTCTCACAGCCCCG GTGAAACTTTTTTCCCACAGAAGGGATAAAAATTGTCCAAATCCCAATGG GGATAGAGATTCTAAAGTCCCAAGGTTAAACCATCCATTAGGGATGGTTT AGGAGTGCAATTTTAAAATATTGAGTCTCGAATGGGAATTAAATCAAATA GTGTGGTCGTGTTACAAAAGTACAGGCTGTTTGTAGAAAAAAAATAATAT ATAGCTGAAACTTTCTCCAGACCTTCTCTATAGGATGCTTATGCCTCAGG AAAAAATCCCCTAAAATCCCACTGGTGGAANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCTGAGG CATAAGCATCCTATAGAGAAGGTCTGGAGAAAGTTTCAGCTATATATTAT TTTTTTCCTGTAAATTATGCTAAACGACCCCACTAAAAGTTAATGGGGCC AAACCCTGGTTGGCTGGGGTCTCAACGGTCAGTGACACAGGGGTGTAATA GGCCTTACACCTAAAAAGTTATGAGCATTTCTTTATTCTAATTGAAGATT TATAACACTTCTTCTATTTTATCATTTTCACTTATGATTTGAAGCTCATT AATCAGAATGTCAATATCGCAAAGTAATTTAGTATCAAGTGCAGATTTTC ACATGATAATATTGAAATTGTAAATCCAAATTTCAATATTTCTACACGTA AATAACAGATTAGAAATTCTTTTCACAAAATTATAACAATTGTTGAGTTA ATTATAACTATCACAGTTTTGTCTGTCTTAGAGGCAATTTTATCACGCCA TCACGAAAACCGCTTGGGGGGGGGGCTCGTCTTAGCTTTCTGTAACTAGG ATTCTCGAAGACATTTTCAGTTCATTTTTGAAGGAAGAGTACCCTTGATA AGAAAATATCCTGTACGTCAGTATTTTTTAAGGAAAATAATTTGTGTATT TATTTTTGAAAAAAGTGGTTTGTTCAGTATCCTTTATAGAAATTCTTTAT TTGCAAAAAATTGTTCTGTATTTTTGAAGGAAAAAATGAATACGAAACTG TCTATAAATAACCGTGTGCTCTACATATTTCTTTTATAAGTAACCAGGTT GCTAAGACTCGAGCCCTGAAATTCTCGTAAAGTAAAAGCTTTTTAGATAA TCTAAGCTTGGCAAACGATAGCCCTTGACCCAATAAACATACATATGGTG TGATGAGCCTGATGGTCAAAGCAAATTTTTCAGAAATTGAGCTAAAAAAC CAACCCCAAGCCTGACCCGAAAATTGGAGTTGCTTATAAAAAAATGTATA GTCATATAAGAAATGGCTATCCTGTGTTTTGAAGGAAAGCTTGTTATGTT ATTTTTCGAGGAAAATGTATTTTTGAGGGAAATGTATTTTTGAGGAAATA TATTTTTGAGAAAAATGTATTTTTGAGTGAAATGTAATTTTGAGGAAAAT GTATTGAGGGAAATATATCTTTGAGGAAAATGTATTTATGAGGAAAATGT ATTATTGAGGAAAATGTATTTTTGAGGAAAATGTATTTTTGAGGAAAATG TATTTTTGAGGAAAATGTATCTTTAAGGGAAATGTATTTTTGAGGAAAAT GTATTTTTGAGGAAAATGTATTTTTGAGGAAAATGTATCTTTAAGGGAAA TGTATTTTTGAGGAAAATGTATTTTTGAGGAAAATGTATTTTTGAGGAAA ATGTATTTTTGAGGAAAATGTATCTTTAAGGGAAATGTATTTTTGAGGAA AATGTATCTTTAAGGGAAATGTATTTTTGAGGAAGATGTATTTTTGAGGA AAATGTACTTTTAAGGAAAATGTACTTTTAAGGAAAATGTATTCGTGAGG GAATATAATAATGTTCTGAATATCCTTTGTCCTTTGAGGAAAATTTCACC TTGAACTTTTTTCCGCGCAAAGCATTGTGGGCAATTCTCGGAGGTGAAAT CTGAGTTTTCACGTTAAGCCGATATCGTCTATTGCAAAATAATACTGAAT ATTATATATCAGGCCCGGCGGAAAAACCCTTAAAGTGGGGTGACTGAAGG CTCAAAATAAGATAGAATTTGTTAGGAATTTGAGAAAAAAATCTCATTTG ATCGAAAGTGGGGAGGCTGGAGTCTTCCCAGTCTTCCCGCTATATTTTTT TCTAAATTATTTGAGTAAAACAGTAAAAGTCTTTAATTTCTCCATATAGC TAAGAAAGCTAACAAGGAAAAACATCTAGAAACTTGTTAAAGAGATGAAG CAAAAGAATTCTAGGAAGATAATTTCATGTTTACTGTAGATTGAATCGTA ATACAAACCTATTCTTTTGCAGCTCATCAAAAATAAATTTATTTCAAATT TCTTGTTTAATCAGCCATACAGTATTGACTCGTTCAACGTCAAGAGAAGG TTGGTACTTCTGAAGTGGATGGTCATCAAATTTTATCAGATGGTTAAAGA CCCATTTACATTTACAAATAATACGCCCACAGTAGACAACAAAGTCTTCA TTATTTGTTTACATTTATTTCGATGAAATAATAATTGAATCATTTTCTTT TTGAAATATTTTCTTGCTCCTTTTAACTTCCTTGTAGCTATATCCTTGT

Coding sequence (CDS) from alignment at scaffold_365:148152..157450-

>TCONS_00062481 ID=TCONS_00062481|Name=TCONS_00062481|organism=Clytia hemisphaerica|type=CDS|length=1896bp|location=Sequence derived from alignment at scaffold_365:148152..157450- (Clytia hemisphaerica)
GGCATTTGCGAAAGAGAAAAATTGCAAGAAAGAAAAGATAAAGATGATGA
TTTCAACATACGAAAAGAAGATTTTACATCTAATCATAATCACCACATAC
AACAACAACCCCCTCATGTGAACCAACATCAGTCTTTTCAAACTCCTTCA
AACATGGACCATCATTCATCTAACCATCCTCTTAATCGAGAGAATCCGCA
AAAACCAACTGGCATCAGTCTTTATGATAATCAACAACAGTCGCCAACGT
ATCCGTATTCTTCAAATGGACAACCACATTCAAATCTACCACAAAACCAA
GTTCGACCCATTGCTTATCCCCCAAGTTTGCCTCAAGGACAACAACCCTT
TGGAAACCTAACACACCAACAATATTATCAGCCTCCGTCCTATCAAAACC
CAGGCCTTCAAGCCACCGAACCTCAAAACTTCCATAATTCTAATCTGAGT
AATTATGGAAACACTCACCCACAGTCAAATCCGACTGGTCATGATTTATA
TGGTGACGCGCTTGACGATTTGAGAGAAACTGAGGCAGACACTGCCAGTC
CGCATTCAAGTGAAAGACCTACGCACCATCAAAGAGGTGATAACGTCAAT
CAACAAATGCATGGGTACTCCGCGCAACAAATGGACCATAATGCCCATCA
ACAAGGTGGTATACCTCCCAATCAACAAATGCAACCAGCAAGACCGGTAC
CCAAACCAAGACGGAACCCCCCAGCAAATTTAGGAAATATGCAAAATAAT
CCAGATTCAAATTTCAGTACAAATGAGATAACTGAAGAGCCTACCTTTGT
TCCTTAGATGTACACTGGCTACTGGGTTTCCAACTTTACTACAATGGAAG
AAATTGCAATTGACAATCTGCATTATTTAGGATACAAACCAAACGGGGAT
CAATTGATTTTAGATACCGAAGAAAAACCTTCCTATGAAGCAAAGACGGG
CATTTGCGAAAGAGAAAAATTGCAAGAAAGAAAAGATAAAGATGATGATT
TCAACATACGAAAAGAAGATTTTACATCTAATCATAATCACCACATACAA
CAACAACCCCCTCATGTGAACCAACATCAGTCTTTTCAAACTCCTTCAAA
CATGGACCATCATTCATCTAACCATCCTCTTAATCGAGAGAATCCGCAAA
AACCAACTGGCATCAGTCTTTATGATAATCAACAACAGTCGCCAACGTAT
CCGTATTCTTCAAATGGACAACCACATTCAAATCTACCACAAAACCAAGT
TCGACCCATTGCTTATCCCCCAAGTTTGCCTCAAGGACAACAACCCTTTG
GAAACCTAACACACCAACAATATTATCAGCCTCCGTCCTATCAAAACCCA
GGCCTTCAAGCCACCGAACCTCAAAACTTCCATAATTCTAATCTGAGTAA
TTATGGAAACACTCACCCACAGTCAAATCCGACTGGTCATGATTTATATG
GTGACGCGCTTGACGATTTGAGAGAAACTGAGGCAGACACTGCCAGTCCG
CATTCAAGTGAAAGACCTACGCACCATCAAAGAGGTGATAACGTCAATCA
ACAAATGCATGGGTACTCCGCGCAACAAATGGACCATAATGCCCATCAAC
AAGGTGGTATACCTCCCAATCAACAAATGCAACCAGCAAGACCGGTACCC
AAACCAAGACGGAACCCCCCAGCAAATTTAGGAAATATGCAAAATAATCC
AGATTCAAATTTCAGTACAAATGAGATAACTGAAGAGCCTACCTTTGTTC
CTTAGATGTACACTGGCTACTGGGTTTCCAACTTTACTACAATGGAAGAA
ATTGCAATTGACAATCTGCATTATTTAGGATACAAACCAAACGGGGATCA
ATTGATTTTAGATACCGAAGAAAAACCTTCCTATGAAGCAAAGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039147XLOC_039147Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062481-proteinTCONS_00062481-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062481-exon-scaffold_365-1575043694:157133..157450TCONS_00062481-exon-scaffold_365-1575043694:157133..157450Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1575043694:155882..156985TCONS_00062481-exon-scaffold_365-1575043694:155882..156985Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1575043694:148152..148386TCONS_00062481-exon-scaffold_365-1575043694:148152..148386Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1510915933:157133..157450TCONS_00062481-exon-scaffold_365-1510915933:157133..157450Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1510915933:155882..156985TCONS_00062481-exon-scaffold_365-1510915933:155882..156985Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1510915933:148152..148386TCONS_00062481-exon-scaffold_365-1510915933:148152..148386Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1491911889:157133..157450TCONS_00062481-exon-scaffold_365-1491911889:157133..157450Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1491911889:155882..156985TCONS_00062481-exon-scaffold_365-1491911889:155882..156985Clytia hemisphaericaexon
TCONS_00062481-exon-scaffold_365-1491911889:148152..148386TCONS_00062481-exon-scaffold_365-1491911889:148152..148386Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_365supercontigscaffold_365:148152..157450 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.1167 13.1814 10.7549 12.1107 22.5976 21.7811 14.9717 13.0536 12.5379 13.5987 9.87839 6.67923 11.1686 10.4215 15.7723 14.64 23.0636 18.2298 15.1191 17.6566 10.3781 8.5402 9.76347 9.6691 18.9064 19.044 1.18933 5.43662e-09 7.58254 5.79467
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062481 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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