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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062544 ID=TCONS_00062544|Name=TCONS_00062544|organism=Clytia hemisphaerica|type=transcript|length=1555bp
TTGGAACTTTATTTATAAACCAAGTATATTTTACATCTATCAAAAAATAC
TAAACAAATTAAATCATCGAAAATAAtattacaaaattgatttttaatgt
tttacatttttttaaatgtttcaatAGGGAAGGGTcagaaaatccgtaaa
atcaaTGTAACGGGTACCAGTGTACAAAATACACGATTGTAAACCATTTA
ACCTATCATATCATCAATAAGTCTCTCAAAATTTGGGCTTACATCCCAAA
TTGAGAAAttagattgttttttatttgcgGTTAATTGCGATAGATTTAAC
TCATCATTAATGGGCGAAATCAGAATTCcgaataaattttattgttggaa
taaaatatataatttgAGCTGTGATGTCCTTTTGTCATTTCAGTTACACA
AAATGGAGTACATTTTTTCGATAAGCATACTGATCAATAATGGACTTTTT
GTGTCTTCTTCCCATATCACGAAATCGCCATCTTTGGTCGTCATTGGAGA
CTCGGTTATGTTGTCATCGATTCTGATTCTGATTGTGTTGTTGAATGTGA
ATGGTGGCTGGTTGAAGTCAGGTactatttctttaaaaaagaaaataata
tgaaCCTGATTATCTCCTCCTATATCTTTTACGTGGTTTGTTATACCCGT
GGCATCTTTATGAAGTTCTAAAAGACTGTACAATCGCCCCGTATTTTCGT
AGGGCAACGTGTAGTATGAATTGCCATTCAAGGCATTCGATCGTGTCGTA
CTTGTATGTATTGTTATATTAACAAAAAAGTCATTTAAGAAGTCGATCGC
ATATCGAACTTCTGGAAATAACTCCAATTGAAACCGTTTATACACTTGCC
ATATGAATGCATTCGTGCTGTTTAATATCttgcatttattttttatacct
CCAGTATACCTCTCGCGCCAATCGTACTGAGGGTTATTTGCGAGATCGAT
TAATATGCGATGTAGGTGAGGATTGAAAAGTGTGTTGTAGAGATCTGCAT
GGATGACATTCTGATTGTCCAGCCATTTCTTACCCTCGTGGCAAAGTGAA
GAACTTGTCAGGCATATGATAATAATGttgtttttctgttttattGCTTT
CAGTTTTGTTACAAAGTTAGATGCCCTTTTGACACTTCTCTTGTATGAAT
TTATGACATATTGCACAGATACAAATAATAGTGTTTGTTCGACTTGATCG
TTACTGTGAGGTATATCTGACAAAAGATTCACAATTTCTTTATCATCTGT
GCTTGTTGTAGCAATCCACTCTGTATCGAGAAATGGAACGTAGTTTTCTT
CTGTCTGGTGAATACAAAGGTTTTGAATGGGTGAATAAATCCATACATCA
AAACAACCCATATCAAACAAAGACTTGATGAAGTATCTCAGCTGCATTGA
TGGGATTTCAAAAAAACCCTCAATTACGTGATCTGACCAGTCACTGTCAA
TATGAGGgatgatggtgatattttttctttcattacaTAACAATGATCCA
CTAGTTGGTTGTAGAATTCTACAAATTGACATTGCAATAATGAGATATGT
GAAGT Run BLAST on NCBI transcript from alignment at scaffold_369:28380..29934+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062544 ID=TCONS_00062544|Name=TCONS_00062544|organism=Clytia hemisphaerica|type=transcript|length=1555bp|location=Sequence derived from alignment at scaffold_369:28380..29934+ (Clytia hemisphaerica)
TTGGAACTTTATTTATAAACCAAGTATATTTTACATCTATCAAAAAATAC
TAAACAAATTAAATCATCGAAAATAAtattacaaaattgatttttaatgt
tttacatttttttaaatgtttcaatAGGGAAGGGTcagaaaatccgtaaa
atcaaTGTAACGGGTACCAGTGTACAAAATACACGATTGTAAACCATTTA
ACCTATCATATCATCAATAAGTCTCTCAAAATTTGGGCTTACATCCCAAA
TTGAGAAAttagattgttttttatttgcgGTTAATTGCGATAGATTTAAC
TCATCATTAATGGGCGAAATCAGAATTCcgaataaattttattgttggaa
taaaatatataatttgAGCTGTGATGTCCTTTTGTCATTTCAGTTACACA
AAATGGAGTACATTTTTTCGATAAGCATACTGATCAATAATGGACTTTTT
GTGTCTTCTTCCCATATCACGAAATCGCCATCTTTGGTCGTCATTGGAGA
CTCGGTTATGTTGTCATCGATTCTGATTCTGATTGTGTTGTTGAATGTGA
ATGGTGGCTGGTTGAAGTCAGGTactatttctttaaaaaagaaaataata
tgaaCCTGATTATCTCCTCCTATATCTTTTACGTGGTTTGTTATACCCGT
GGCATCTTTATGAAGTTCTAAAAGACTGTACAATCGCCCCGTATTTTCGT
AGGGCAACGTGTAGTATGAATTGCCATTCAAGGCATTCGATCGTGTCGTA
CTTGTATGTATTGTTATATTAACAAAAAAGTCATTTAAGAAGTCGATCGC
ATATCGAACTTCTGGAAATAACTCCAATTGAAACCGTTTATACACTTGCC
ATATGAATGCATTCGTGCTGTTTAATATCttgcatttattttttatacct
CCAGTATACCTCTCGCGCCAATCGTACTGAGGGTTATTTGCGAGATCGAT
TAATATGCGATGTAGGTGAGGATTGAAAAGTGTGTTGTAGAGATCTGCAT
GGATGACATTCTGATTGTCCAGCCATTTCTTACCCTCGTGGCAAAGTGAA
GAACTTGTCAGGCATATGATAATAATGttgtttttctgttttattGCTTT
CAGTTTTGTTACAAAGTTAGATGCCCTTTTGACACTTCTCTTGTATGAAT
TTATGACATATTGCACAGATACAAATAATAGTGTTTGTTCGACTTGATCG
TTACTGTGAGGTATATCTGACAAAAGATTCACAATTTCTTTATCATCTGT
GCTTGTTGTAGCAATCCACTCTGTATCGAGAAATGGAACGTAGTTTTCTT
CTGTCTGGTGAATACAAAGGTTTTGAATGGGTGAATAAATCCATACATCA
AAACAACCCATATCAAACAAAGACTTGATGAAGTATCTCAGCTGCATTGA
TGGGATTTCAAAAAAACCCTCAATTACGTGATCTGACCAGTCACTGTCAA
TATGAGGgatgatggtgatattttttctttcattacaTAACAATGATCCA
CTAGTTGGTTGTAGAATTCTACAAATTGACATTGCAATAATGAGATATGT
GAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062544-exon-scaffold_369-1491911889:28380..29934 | TCONS_00062544-exon-scaffold_369-1491911889:28380..29934 | Clytia hemisphaerica | exon |
| TCONS_00062544-exon-scaffold_369-1510915933:28380..29934 | TCONS_00062544-exon-scaffold_369-1510915933:28380..29934 | Clytia hemisphaerica | exon |
| TCONS_00062544-exon-scaffold_369-1575043694:28380..29934 | TCONS_00062544-exon-scaffold_369-1575043694:28380..29934 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:28380..29934 + |
Blast
The following BLAST results are available for this feature:
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