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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062557 ID=TCONS_00062557|Name=TCONS_00062557|organism=Clytia hemisphaerica|type=transcript|length=1227bp
gttccctttattactttttgctttatttctactatgtatgaattagtcgt
ctagcttgctagactatatAATATACAGATTTTATATTGGCTAACTCTCC
CATATTATTATCAAGCTGAACCCGACTAAacaaatccaagatggcggaAG
CAGCACAAGCTCGTGTGCAACATGCAGTTGAAGAAATGTTGGAAtctctt
gaaaaagaaaagctaAGACCGCTTCTTaaaaattctcATTTGGCTGCAGC
AAAATGTTGCGAGAACGAGTTTTCTTCGAAAGAACAGTTGGACCAATGCA
TGAAGCGAAGTTTTGTGCCAGCACAACAAGTCCAAGAAATGATGAGTCGT
GAATTATCCGAATTCCAAAATCGACTGAACCGTTGTGCACAGCGTTGTCA
AGACGAAGCTAAAGACAAACTTCCAGTTAACCCGAACCAAGGTGACATAT
CGGTAGCAGAGGGATATATGAACACTTGTATTAGTAATTGTTGTGACTCA
CATATCGATCTGATACCCAAAATCATGAGGCGAATGAAACAAGCCATGGA
CCAAATATAATGTGAAGTGAACGAATAAGAAAGCCTTTAGAAACGACGAA
ACTTTAGCTGTTCGTTTGAACGGTGGTTAGAACTATTTACAAGACGTCTT
AATTGATTTGAGTGTTGTGTACAGGGGATAATGGCGTGAACTTCATCATT
TGCCGTACTCCAATGGTTTGAAAGTTGAGGATTAGAGACTCTTTAGAGAA
AATAGAACTCCTGATTTCAAAGCATGAATATGAATACAAGGATGAACATG
AGCTTGGTCAGTTAGTTTTCCTTACTTTATATATAttactccattaagaa
ttagtgaattagataacttttaaaatatattgatacATGGCTCTGGTTCT
TAACTAATCGAGCACTCTTATGACATTGATTTACCTCACTTCTTGTTTTT
ACTTGAATATATTATTATGTTTGTAGGACAATTGAAGAGGTATAGCTTCT
cctttagatttttattttgtgaattGATGCCAACTCTTCGaaaattgact
tcaaaattCATGCGTTCCGATACCCTCCATTTATACCATCATTCACACCA
ATTTTTGAATTGATGATGAAATTTTCCTTAGTGCTATCagaataaaccag
ccgaggctggaaggtcagccaatagagcttagctagatagctttaataag
tgggttaacagatgtaagagatgtact Run BLAST on NCBI protein sequence of TCONS_00062557-protein >TCONS_00062557-protein ID=TCONS_00062557-protein|Name=TCONS_00062557-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
MAEAAQARVQHAVEEMLESLEKEKLRPLLKNSHLAAAKCCENEFSSKEQL
DQCMKRSFVPAQQVQEMMSRELSEFQNRLNRCAQRCQDEAKDKLPVNPNQ
GDISVAEGYMNTCISNCCDSHIDLIPKIMRRMKQAMDQI Run BLAST on NCBI transcript from alignment at scaffold_369:210890..230737+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062557 ID=TCONS_00062557|Name=TCONS_00062557|organism=Clytia hemisphaerica|type=transcript|length=19848bp|location=Sequence derived from alignment at scaffold_369:210890..230737+ (Clytia hemisphaerica)
gttccctttattactttttgctttatttctactatgtatgaattagtcgt
ctagcttgctagactatatAATATACAGATTTTATATTGGCTAACTCTCC
CATATTATTATCAAGCTGAACCCGACTAAacaaatccaagatggcggaAG
CAGCACAAGCTCGTGTGCAACATGCAGTTGAAGAAATGTTGGAAtctctt
gaaaaagaaaagctaAGACCGCTTCTTGTAAGTAATTTTTAGctaccaaa
aatattttatagctTGATTAACGAAATCAAATGTATCAGTGATAAACTAG
CCCTCAATTTTTATAGCAGAGCCAACAAAAAGCAGCCACAAAAGGTcata
tccagacgatctcagTCAACGGAATCGACgcacgatcgaaccagtcgaac
caaatcgaacgcaatggaccgattgaaattcgattgtcgaacgcaatcga
atctcaatcgaacgtcaaaattctgggtaatattcgattcaTGGTTCAAT
TGTTGTTCGACTGCATTCGATTGACGTTCTCGACTGCATTTTTGATTGCC
GTTTGATCGTCTTTCGCCTGCGTTTGATTGTTCTATGCTCTAAAGAAAGC
CAATTTTCCATCGTAAATCAAAGAAGAGTGTTTGACGCCCTCTGATGTCC
CGAAAACATACAATCTACCACTTTCGTATCGTCATACTTTCTTAACCGTA
TAGAAAGGATATGATTCCTCACGTGACCTAATTCAGCAATTTGTCCTTCC
GCCCTCATGATAACACTTGCTTTTCTTATCCCGCCCTTACTCGCTTCGGG
CCGAATCCTTAGGTCACAGTTCAAAAGCACAAAAAAGAAGCGCTTCAATg
ttagggtgcgcactcgtcatgattttttgcgcggaacgaggaagaatttg
caaaaatgaacttcaatgcattagcaGTTTGGCTCGAATCcttcagatcc
ttggttagaaaaagctatacctgtttaggggccgtcgacaaacgactttc
cttttttttaacggcctgaggccgttaaggttcagaccccctccccccta
cgtcttagcggccaaaataattcttcaaaagtaaatactttCGCTGGTCC
ATGGCCGCCATGTTCTTTCGATGCGTAATcctcaaagttcttcttttcgc
acggaataaacatgtggttttgagctgtgacctttcaattttgaaactcc
aaGCCCCGCAGCAAGTCAGGgcgggatgggtggagcaaggagtcaactga
ggcggagggaaaaattgccgactttcgtcacgtgaccagtcatttttctc
gtcgaagcattaattggtgatcgggaataaggtgaatgtcgtgtggtagc
ctttcttcacatgtttctactttttggactgatgaaatttgtaagtgaga
ctttcccttttttaaaacttttttaacggcattgcagtgaccccctccca
ccccttacggccagaagccgttaaaaaaaaggaaaatcgtttgtcgacgg
ccccttacttttttcttctcagattcaacaagccatcaaccaacaaaatt
accACTGACACCTGAAAACTCACACAACCTTTCCActagacacttctaaa
ttatctgccattatgaagatgttccgaaattaaccaatcagttagtcaca
ctagcgtcccgccaaaatgcatatcaaagattaatgctgcgaaaacgcta
tatcgtttacttgactcgcaagcaaaaaaatgcgccgcaaaacttctaaa
gggatttatgaaaaaataatccggcgctttttgatgaaattaacattttc
aaaaactatgagaaattgcctaaaatttgagccatagatgaaaaaatttg
agtcaagccaaccttgaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNgatctacgggggagacggaacccacctagatccgcgc
accgccggataggctacttcccggaaattttgccggacctcaaacactga
cccatttacatggacagaattttttttactttagcgtataaacaaaactc
gaagcgctgtctcgggaattgaatgacaaattttggttggttgattttgg
ctgctgcacgttttattttgtttcaaactttcaagttttaattaaacttg
attcaggtgactctcatccttgttgttgcaaatacatcctgttgtttttt
ctgaaagttagatttcctagtgtgactaactgccaatcgggtttacaatc
ggaattcctctgggatttagcgagtcgggaaatgtaaagttatgtaatag
gtaatacataatttttccgggggttaaacttataaataaaattgaaatgg
tttgtttttttcttcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGctattactta
ctatttttacccccgctttttaaacagcgtcttctgtgggcgtgatatca
ggcggagacaaaacgccctcatcgtaagattctcgggtcatcttattgtt
tgttccttttgtcgagtctgtcggtcctattgttcttgctaaatccatac
acgatgacgtcaatgtttggccgcatacctgaaaataaaaaacaaaaaga
ttatcatattatttttgcatgaattacgctaccttatacgtcattataaa
attatacaaaacgaaaGCGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaggggaaaacga
aagtgatcgatattcttcgaaggaagaatttgccaaacaaacccctagac
aaaaagatgtattttgaggttgggaatggatcctgcgaaaatgaacaaat
tttgactaggggtttttttggcaaagccaaaaactctaatttttttcttc
cctcaagctaaaaaggttatgtcggtgttttttacacttttggcgaaaac
gtgaagttttttaaaacacgttttaaaaataaatacaaattgCACCTTTT
CTTAATTGGATATCAGGGGATCGGCAAAGGATTGAAGATTCCATTCCTTT
TTTCCCGAGCCTTCTAGAGAAACTAAGCTAGTACTTATAACCTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTTCG
CTCCTGGGACCAAAACCAAAGCTCTAAGCTCGTGTGCTCcacctttttgg
aagatttcatCCCAAAATCCTTGTTGAAACTTATATTATTCAACAAAAgc
cgttttttagaaaatttaatgtcacgttttcgccaaaagtgtaaaaaaca
ccgacttATGGGTTTTGGGCAATCaaggcaaaaatcagcaaaaagctggt
gttttccgtAAATCTGAGAATTGCAATAAGATCCTCACTGAGAACGAGGA
AGatttacaaatttgaacttcaaattacctttaaatcatccaaatctgtt
cattcttttttttaaatcaatcagaaACTATCAGGGATCAACAAGcaaaa
aaactgcatccaggtatctattttctttccaaagatattcatgtttttcg
atgtcaaggtgaaaacgcgatttagcgctgaccacggcaccggaaaattc
tcgacccacattgaaacaaatggctgtcgctattgagcttTATTTGGAAA
TCTACAGGCCTTCTGGAATTTCGagaaataagaagaaattgcgattttta
acaagattgcggattttttcatttaagcaccatacaccatctgaaagctg
aggatttcaggtttctagtggtgaaatttgtttttagctatcatttccag
gtcattagcgataagctaaagtttaacagtcatcggaccgattttcagac
cgcaccggcaaaactccccacaccccgccacacggaagactagatttcat
ccgccatttttggcgcaattttggtgcttccgaaaattattacTTGCTGG
CGAAGTGTAAGGAGgtgattctttgaaaaggtgatttttttgtgttttga
aatggaataactttgggaatacttaaaCAATtctaacaaatgacccctca
tttttctcacaaaggtaaggactttcaaataaaattagtttggtttctta
aaattgaggggaaaattttggcctgtccaccctaatattgatgttttttc
gacgtcaaggtgaaaacacgacttagcgctgaccacggcaccggaaattT
CTCGACCCACATGGaccaaatggctgtcgctattgagctggttcatcttt
tcaatcgcgtttttttagtaaacccagggtaagattaggctacaatctat
cacaataagctttatttgaaaatctacaggccgtctggaattaaaaaaaa
tagaagaaattgcgattttttaacaagattgcggatttttttcatttaag
caccatacaccatctggaagctgaggatttcagctttctagtggtgaaat
ttgtttttagctatcatttccagctcattagcgataagctgaagtttaac
agtcatcagGAGGCAATtatttgaaaaggtgatttttttgtgttttgaaa
tggaataactttgggaatacttaaccaattctaataaatgacccctcatt
tttctcacaaaggtaatgactttcaaataaaattagtttggtttctaaaa
attgaggggaaaattttggcctgtccaccctatcAATGTTAGCAAAGCAA
AAGAAGGGGAACCATGACGCAATCGCCAGCACcgcgcaatcgaacgcaat
cgaaactcaatcgaatgcaatcgaatatcaatcaaatctgaaaattgcag
tAATATTCTATTGAGATTGCATTCGAcaattgggtaacttgcatcagtgg
accCTAACATGCTCAGTGAGACTTGAACTCGAtctttgaggattacgatt
ttaccagctttttagcaatttttgcctcgctagtacccaaatctcgcaac
ctctttaccttaaggaagatcgaaattagagtttttcaccgttccgaaaa
aaacgcatagcagaaattttttcatcttcacaggatcgatcctcaacaac
aaaatacatcttttggtctttgggtttgtttctgatgtttttccttcaaa
gaatatctcaaataggctctccgatggagtgcaaggctgaaagccacatg
aatatggttcatcctataaaaggaaagtcaatctatggtggcctatcttg
aagtgaaggtggttgaacaaaatgtttttggcatattgatgtaactgctt
gggacaagtgtacgcaacatgggacttgttgatatctggcctgtattttc
acttactgttaaatctctttgacaacaaatttgttttgataactccaccg
agtttatcaatcatactttctgtcataacatgtcacgatagcgcgccctt
tttgattttcattcaaaatgaccgggcGCCGAATGGAGAATATGAGAACG
CCTGCCGCCTAACTGCCTACCGCCTAACCGTCtaccgcctaaccgcctac
cgcCCAATGGGATAAACAAatagtgttttttacacttttcgaaaagtgaa
ttttgactttaaaagctcataagtagagaacaagttggtcaaatttaaaa
agtgatgtctcaaattttaagttaggatatctactttctaaatatcaaaa
ctccaagcactttgggacatttgctgctcggcctcaagacgtcgggaaac
gtctgaactttttcgtgggtcacccggtacaaaattaaatatcaaaacaa
aaattgtagaATAGTGCTgtgagcagagctgcgtagtttattggacctac
caaagtcagtcctttaaattaacccttgtccgttcgttcgtttgttagtt
cgtccgttcgtctgttgccagcttttctcgggatcggctcattagttttt
tctaatattttgcacaatgatgcaaaatggcaatgcccaaaatctgacgg
agcccgatttttgaaaaaaaaattttctctcgcCAGGATGGGAAATGTCC
CGCAAAGcgtttttttgggattttctcgagattttctcgagattttatca
ttagttttttgtaCATAGAGGCTTTTTAGTACTGccaaaaagatgttgaa
aacggttttctgaaaaaaaaatttttccggcctgTAGAACCTGAAATGTt
ccggaaattgccgttttttcGTATTTCCAAGACACTTTTTCGActtattt
gatcgttttttttacagaaaaaggttCTCTTTGGTGATACCCAAAACTTT
GCatcatttaattttcaataaaatcatttgttCCATCCGTAACTCcttaa
aaattgccggaacagccgaaaaccggcgtaaaacagatatccttcatttt
ttcgagttatccttgacagattttcatgatttttggcacaatgatgcaaa
atggcaacgcccaaaatgtgacgtgccggaaaaactggtttttttggcat
tttctcgagattttatcattagttttttctgattttttgctcaaagatgc
gtataaACAATGCCGAATAACATGGCATAGtccgatttttgataaaattt
tttttccggccgaaaatgccggaaatatgccggaaatcgccgtttttctg
gatttcattggtctttttccttataattggttgttttttcattcaaaaaa
attatttttagcaatgcccaccatcaagcatgttcaaattttcattaaaa
ttgatttttgaagccggaactattgaCTGGctgatttctttcatttttct
tctcgcattgctatctaactttcatcatcaggtaggtccattcatcatgt
tgcttgtttgttttgaaattttgctgctttgattggttaCTCATttgatg
caagtttccctccactgatgcaagttacccgacttaaCAATAAGAGATAA
TTTTTCCGACTGaaagtgaaacactttttctgaaaaatttagaGTTGGTC
GAAGGACACAAACCAAACTATCAGTTGGGCCTGgcctaacctgagatcag
attgaatgtttttttgcaaaccaCGCTGAAACACCTCATGACATTGACAA
ATAATCCCTGTCAGGCTatctctaaagctctaaaacagcatataataaca
tgaaaatcagaatatgattcttcaatgggaatcaaaactataaagtgcac
ttacaaacatcaatatgtaaGATATAACAAgattaataacggcactgtca
tcattgacaataaaacaaaggattttctgtcttGTAAATATTCAAACAAC
TTCCAGCGAAATGGTCTGTCACTgctagtctaccatttttagcgcggtct
gAGGATGAGCCAAGAACGCTCACAGAACGCCCGCGAGCTCCCatgcgggt
gaaaaactttaatctgtcaatcatcttCTCAAGTGAAGAGTATGCCAAGC
GATTCTATTTTTGCGATAGTGCTgcagatcatcagtggatagtattcaat
tatcattatcatattattttcactcctagaacttttgcaaaaaaaaaagg
aaatatagaaaagttgtattttttactgctctattcacataccgtgagtc
ctaaatccgacagccgtgcctaaatccgatggggtctttcaaagatgcaa
actaaaataaaaaaacctttggggctggctggagacttcaaaagttgtcc
gattttgttgaaattttccacacttgatccttgggtgaatccctgcggta
tttttttcaatttttcaaaattctcatttttaagggcgtggtcacaatat
ttcgccaaaacgaggctaaaactttggggcaggctggagacttcaaaaat
ggtcggatttggctgaaattttgcatacttgTTCCTTGAGTGAATACCTG
gggatatttttttcatttttttcaatttttcaattttaagggTGTGGTCG
CAATATTTCgccaaaacaaggctaaaactttggggcagtctggagacttc
aaaaatggtcagatttggctgaaatttggcacacttgttccttggctggg
tgaatatctggggggtgttttttcatgttttcaaaattttgatttttagg
ggcGTGGTTTCGAGTTTAGCCTCAAAACAAGGCTAAAACCTATTTAAGAA
ATGCTAAAATTTtccttaagccattaagtttacactTGGGCCTacaaatg
atttcaaagatacttaAGTTgggccagtgcggttagcacgttcgacagta
aaaaatcattgaattaaagaagaacttaaaatctcaAAGGTGAACGGTTT
CAAAAATTGTGCGACATTTTTTAGAAcacaaaaaatggacaaaaatattt
aaagttgAATAAAATCTACTCAAATTAATTACaagccttgaaattttgac
aggtaatggaaaattttatcagcttttcaaaaatatatttatgaaGTTAT
TCTTTGTGACAATAAATGTTTTACTAAATGAATTACCCTGTTATGTTCAA
AGTATGTCACTCTCTGTCACAATCAActgttgaaaataatttaaacatAA
ATCCATGTTTTCATACCTCCTATATCATCCAGTAGTTAAATATGAACAAC
TTTCGGTGTTGATTATGCCAATCAATGACTTACTTAATgggtaaaaaaac
taaaatatgtCATCCTTAAAGTAAGTCATTTTTTGTCACACTTTACTTCT
GGGTATAACTTGAGATATAGTAAGTCAACACCCAGTACTGAATTTTTGAA
ACTGTTCaggttttcattttgaagaattggtgcagaAAAGCGAAGCATGG
AAAAGTTGCATTGCACTCCAAATTGATATAAGAGTCTACTGTCTGACTTC
TTTGTACGGGTGAAAgtatattttttgttattcaatCAGTATATAGTCCT
TActcttcatataaaatttatgggaaacacaaattttcacccatgtttta
attttcaattcttttgccATTGTTCAACTTCTTCTTCTAATTTCCTTAAT
ACATCACTCATTCTGAAGCCTTTCTCTCCGAaaccatgaaaatattttaa
agatatATCTAATTCATATAATTTATGTGATTTATTtagtatttatttat
ttgacTTGAACTTCTCATCACCATTAATTTACATTTTTAGTTTGAGGTTT
CAACTTTTCTCTCCTAGTTTTCAATACCGCCCTGAGCATCAAGGATGATG
GTTTCGAATGAGTACTGCAGCATTGAACCTAAAAAGCCCTtgcaaaattg
ataataatttgTCATCGCAGTAGTTAATTTTAATCTTGTGTTTAATTATA
AAGGATATTTCATTTCATAAATCTATAAGCTTTTTCTTAATCATAGAAAC
TCTTTCCCCCGAATCCCACTTTGTTGCATTGGAAAAAATTTCTCTACGcg
tttttttgtataagaacaaattatataaaaacgtAAGGCTTTGTTGGCCA
AAATGTgaagaacaagtttagaacatttttaggcttgaaacttaaaaaat
taagaacatcaataggcttcaaagattttggatgttcttaaaaaaaacgt
gtatagcaGATTTAATCTTCCATCATTTTTGGGTAAATCATAACAAAAAA
ACATGCTGTTTTGGCTCATTCAGACACTTTAATATTAAAACTACCCGGCC
CGTCTGCCAAAACCGGTTCACCCcaacaattctttttttttccatttcca
cgtttttctaaaaacataggacttcgatggtcaaaatattaagaacaagt
taagaacattattagGCTTTGCGGACTTGAAAATACCCGATTTATTAGGA
AAAACGCAAATGAAAACGAACATTTTggttgttcttaaaaaaaacgtgta
gtgcaAATTATCTTGTAAACTTACTACACTTACTTGTTAATCCTTTTTTA
CTAAATATAGAGAGGGAATCAGGTCTATTTCTTAAATAACATTGGACACT
AGAAATAAATGATGCTGGGGATTTATTGAAGTTATTTATTAACCCTCTAA
GGAACGAAATACGATATACCTCATCATCGCGTTCTGTGCCAAAAATACTT
GCAATGTCATGCCAAAAATACTAATATTTTACAATACCtcggtttttgaa
aaattgtcattgATATaccgaaagaaagaaaataggaaaaaagaaaatcg
tccagctttgaaaattttagctttctAAATTAATCGTTAAAAACTAATGT
TTTTATGTTAGTTTTAGTTCGAagggaaagaaaataaaattttctttttg
ataaaaaaaatcagaagaTTTCCTTTTTCGAGCTAAAATAAAATTCAACA
CTGCATTAAATGACGTGAATAATGAATtatttcaaggctttgtggactct
aaaaaaCCCCGATTAatccaaaaaatttggatgttcttatagtaAAAAAG
GTGTAAGCTTACTGataATCTACTCTAGCTAAAAAAAGCTCCCTTTTTAA
TGAATATAAAGAGTGAATTAAACTATCTATTGGacaatataaataaatat
agGTAGGAGTTAATTGAAGTTATTTATTAAGGATTGCATCAAGATCAACA
AggatattttaaaaacttttgattGATTTCCTCTCGAGCTATTCAGTAAG
GGACATGAACAAAGATCTTTAGTAATAAAATCATCCATAGCACACAAAGT
ACTTTTTAGAGTGAGACAAGTGAAGATATATAAATATTCATCGTTTAGTT
GCTGATTTGATAAGTAAATTTTGTGCACTGTTTCGTGTTATTGGTGAAGA
AGGATGTACAAAAACCCAATTCAAcgaattttgtttgtatttgcCTTTCA
TTTTTACATCGAACTTTTGACTACAAATTCAAGAATCAACAGTAAGTTCA
AGAAATCCAATTTAACTTCTATTGTTTACCCTGAAACTTACACTAGTCCA
GGAGCGGTCTAGGCATACCCTTATAACAAGTATAtacctgttcttatttt
gaatttctcattttattatttcttgGGACTTTATTACCTGTTTATTTTGA
TAGTTTGTCAAAAACAAACATCCTCTTTCTAGATGATGGCCAAGGAAGGC
AAGCCTCAAAATCCGAAAAACATGCGGTCCAATATAcgtatttccaattt
tttctggaaacgCTGTgccttttttaataaaacaattCTATTTTACACCC
TATTAGAATGTCTCATTGAAGAATTTCGACAAGCTCAACAGCGAGAGGAA
ATTCTGAAGAAAGTTGTTCAATCGATTTTTAACATGGGAATAAGTAAATC
ATTTTATGATATTTACGAAGGAGCGTCATTAACTGGAAGCCTCAATCAAG
GAACATTTATCGCATCATTGttcaaagaaaatgtcaaatacAAGGGTTCA
CTTATCACTAGAGAGATTGACATTGATTGCTTGATTAATCTAAGACTCGA
TCTGAAAAAATCCCGACAATGTCTGAGAGAAATCAAAGGAATACCGGGAT
TTGTGCAATTCCTGACCCGCTGTATACCAGATAATGGAACTTGGTATGTT
TTTATCGAGAAAGCAACCAAATATATCCAACCAGTCATGCTTAAAAGCAA
GGTAAAGGATATATTGAATGGTGGTCGATCAAACACCAGGAAAAGAGCAG
TGCATGCTCTTTTTCTCTATCATTTCTTAAAACGAGGAATCATATTCAAA
AGTATAAATGTAAAGGTTTTCGGAAAAACAAGCAAAGCTACTGTGaaaca
tatttttgaaattcagaaaGATGAGAGCCTTTTCTTGACCATGGAGTTCG
ATTATGCTTTTATGTTTAAAGTATTCTACAGACCAAGGGTCATGTTAAAT
TTTCTAGCAAGGACACAATACAATGTTAGTAGAGAAATATCAGAATATAT
TCATGTCCTAGCTAAAACATCACACGAGCAAAAACACAACATCAATACAA
CAGAATGGACTTATTCTTTCTCTCATATCGAGAATTTTATATTGAACTCT
TTTTCTGATGCAAAAAAACTTGTTTACGtgattttcaaatcaatatTCAA
TAAATCGTTAAAGTTTTTAGATGAAGAAATAGTAACTTCTTACATCGTCA
AAACTATCGTTTTATGGAGATTCGAAGATGTCAATTTGATATACTTTGAC
GATTGGCTAAATGACACAAAGATTTGGGAAGCGATTGATATTTTATTTAG
AGATTTACTTGTAGCAATTGAAAGAGGATTCTTAAAACATTATTTCATTC
CAgaaatcaatgttcttaaacGTTTTGACAAAAGTTTGAGAGACAATTGT
CAAAAACGAATAAAAGATATCAgaacaaatttgaaaacaatacTCCTTAT
TAGTGAAATAAGTGAGGCAAGAAATATTCTTGAAGAGTTGTTGTTATTGC
TCTACGATGGTCAAACCTATTTAACCTTGGAGGCATTTGTTGAGATTTTA
GAAGATACATCACGCTCtttttcatagaattatatATTTTATTGTATCTT
TTATGTATGTTGATGAATAAAAAGATAGTAGGcgattgaataattcctga
tataccacgATTATTAGACAACGGTAGAATTTTTGCTTTCATTAAAGAGT
ACAGATtgttcattttgaaagaaacaattttagaattgttgaaatatgaT
ACCATACTCAGTATAATACTAATATTTATAGTATAATATTAATATACTAA
TACTAAAGCATCATTATACTCTGCCTTTAGATCTTGGTATTCTCAGCATC
AAGCCTTATGTTTAGCCTTGCGTAAATATTCTCAGTCTTGATATTTTTTA
Ggttttaccttaagggaagaaattttcgcgagaagaaattttcgatttcg
cggaatttaatttcgcgaatgagccgatttcaaaagtttcacggaattta
atttcgcgattgggaaatttcaaaagaattttttttacggagaaaaagtt
ttttcattattttcatcgaCATTCAAGACGATTTCAGTCACATTAACAAa
ctttaacaacaaaataataacatcaaagatGGATGTGTCTATGATAAGTC
ATGATTAAACTTCATCGCCGTCTTCTTCCtctaaaaaatcgaatttcgcg
gaatttaatttcgcgatttagccATTTTgatgtgtttcgcggaatttaat
ttcgcgaattacgcccaaattcgtgaaattaaattccgcgaaaatttctt
cccttaaggtagagcatttttagaattttatattatagattatttttgaa
taaagaaaCAAATACTTTATTACTAACTCATTTTCATTATCTGTATCTGT
AGCATCGTCCACTTTGTTGGTTTAAACAAGCATCCACTGGTGCTGCAAGA
CTTTTCCAATTCCTTCCACATCCTGCCACATCCTGCCACATCTCCTTCCT
TTACCGAAATTATTGCCAATATCATCATTTCTAATCTATTCCTTTCTCTC
AAATTGCTGGTCAATTTGCCTTTCCTTTTTGATTCTCTTCCCACTCTATC
TCtatttcttctttcattttcattttaatcatCTTTTTTCATGCTTCTGT
TGCCTTTCCTCTGCCTGATCAATTTCTACACCAATTTTTCTTGCTAGTTC
TTCTGTTTTGTAATACCAATTGTCTGTTCGGACTTTTTCTGGCTTTGTAT
CacaatttttcccaatttattatcaTCCGATTTCATCATGTTTTCATACA
ACATTAGTCTATGGTACTGTATTTTCTGTCTCGTTGGCCAATACTTCTTT
TATAATACCCCAGTATGGTGTTGTAGAGGGGAGTCTCCCTCCTTGTATTT
TCTAGTCTTTGGAAATTCTTTTCTTCGATATTTTGTATATGTATAAAGTG
TTTTTTCATAAATCAGTATTCTTGCTTCATTTTTCCCAGTTGATCGTCCC
TCGCAATCCTCATAACTTCTGTTGTAAACAAATTCTCCTCTATTTGTCTT
TCTATTTTTCGGCTCTCTGGCAACCAATTTCCCAGGTATTTGTATTCACT
TGTCTTCTCCACCATCCCCtttctcaattttatttctggCTCCTGGTTTG
AATCTTTGCCAGTTTTCACTAatagtggcgtggtgggaaaatttctctgg
ggtggccaaggcaaatatggcgcctttttttaaagattttttgtttttgg
cgcccctctctatacgctcattatgaacacaaaaaagggagtgtgcgagc
gaagcgagctagaaaattttgagtttttgaggtgataagaggcgccattt
ttgttttttcatttgtcaatctttatatgggcgcctgaaaaatccttctt
ggcgtcccttatttttgggcgccccttctcaaaagggctccgctgggggg
gcctggcccccctggccccccctgccaccacgccactgttCACTATCATA
TAGCTTGTTTTACCTTTATCAATGTTGAATGtgaatttcttttcatcttc
CATAATTCGTAGTTTATCTCCCTGCCATAGCAATGTCATCCACATATACG
ATGCTATCCACTTCAGCATTTGGAGGAACTGTCATGCCTGTTGGTTCTCC
TAATTCGTTTATTTTTGACGTACTACTACAACATAACTTCATAAGTTTCA
CAACTTTTTCTATGTTGAATGTTTCTCCGCACGACGTTCTAGCTTTCATC
TGTGCATCGTATACGGCAGCATGGCTTCTCTTTCCTGTAGTCCATTTTCA
ACAATATCACTGACACAATCCTCCGTCCATAGTTTGTCGAAGCACTTTTC
TGCGTCTGCAAGCAGTATATATGTATTCCTCTATTCATATTCATGACCAT
GGATCATAGTCATCAGGGCTAGCCAGTTGTTCTTCGTTGATCTTCCTTTA
ATTCCTCCATTTTGATGTTTATCAATTTTGATGTCTTTGGTGACTTTCTG
AAGTAGGACtttttcaaatactttttcCATTACGCTTGTCAGAAAGATTC
CCCTTCTGTTTTTCATCATTGGTTTCTTTCCcttgttttcttaaaaatac
tCTCAACGTCATCATAATACTCTTAATTTCATCAATGTCCGAATGAAAAT
ATGAATAAAACTATTGACTTGACTTGAAAGTAAATTTTCTATCCCTGCCT
CTTCATCAATTTTATAGAtatgctttctttgtaacttcgtaacttttgag
agtttttctaagatcacttttatcgattCCCCTTCTTCTTAACTTtaaag
agtgtttctaagatcacgtTTATCAACTAACCATTTTCTTTATTACTGTA
ACTAGTTGTTCCAactaaaacacaaagaaatacatAAACATATcgacgtc
agtacgatcaagacaagatttgacgtcaaatcacagtagagctgacagtt
agttggtcttaaaacggctgtatttctttgtgtgttttagtcagagagtt
gttgtaatacaattttttaCTCAGAACTTCATGCTCTAtgagatggtacc
aatcattttcgtttattttgacttttaagaatcagctatttctctacccc
ttattttcccttgcagttttgcctatggcgtcactattttggtcacaaaa
agttttcccaggcctaatccgcgtcctccctctcaaaaatatcttataat
atactgttctttagaatagactaaaaatggctaggtcgtaaaaaagatgt
cacggaacccccAGGCTTAGCCCCCAATTATtaatgtctaatgttatggt
ttttgaaGGGCTTGCTTAAGAGATGAGAGGTCTATTAAAagcctactctc
gggtacctaatagccgggggggttggaataagcaggggggttggaaaaaa
tctcaaaattttataagcgggggggttggaatacgAATGTCCTGggcgga
aaattttcgaaaaattaattagcggggggggccgctattaggtacccgag
agtaccccCTCCTCTGGGATAGCTTAACAGGTTGATACTTACTTTGGATT
TCCTAGGGcctaatttttacatttttgataGATCACTGTTGATTTAGTGG
GAGAGGATTGTCTTCTTCATAACACAAGGTCGTATCTTCAGTTATATAGA
TGAAAGAAGGTTTTTTTATGAGTCAGGGTTATCTCTCCAAAGAAACAGGG
TTGNgggggggggggttggaataagaatgtcctgggtggaaaattttcga
aaaattaattagcggggggggggacggctattaagtacccgttAAGTACC
GCTCATTGAAACAGGAGTTTTATGGAGAGTATGATGGGTGGGTTAACTTT
GagaataacttttaaaattggaGAAATTTCGGGCAATCAAAACATGAAAC
ATACATTATCTCAGGATTGGAAAGGTGTTATACTATACATAATAATTTAT
TACCTTGAAAGTCTCATCTTAATCAAAGATCACTAACAAAATAATCTAGA
ACGCACATTAAATGCATTGACTTACCTTCATTACAATTTTCGACAAAACT
GTTGAGGCTATTCCCAGGCTAATTTTAAGTTTGGATTACTGAAAAGGTGT
ATTCCAGAATTTTCCAGCAAAATAGTCATTTTGTTTGTATCGCAGAAATC
AAAGTTCTTAGGTTGCATTTTGTATTGTGTTGTATTTCAGACCTAATCAT
GATTTATTCTCTTTAACAAGATTGTTTAGCCTTTAGCTGTAAACCTGGTG
ATAATAAGGTTCTTAATCGGGAGTTATTTTTGAATCAATGGGCTTCTTAA
AAATTTCGATTGATAAAAAGTCGAATTTCCATCAgcttcaaaaactaaaa
aaatcgaaaattcaaATTACGTGATTCGTAAAACTTCTTGATAGGACTTG
AAAATCTGTTcgatttaaatgatttttcgaataaCATGGGTTCAAATTAA
AGCAGTTTTCTTGTTTCTTGTTTTTGAATGCTAAGTCTGAGGGGCCACAA
AATCTGTTCGAATTAAGTGAGTATTCGAATTATAGGAGTTTTAATTATAG
GAGTTTAACTGTAGTTTGCTCCTTTCGTTGTTGAGATATAGATATTTTGA
AATCTCATGGatttccaaaaaactaaaatgcgTGGTCCAATCgcatactt
taggcgtacaaactttcgctagaagaaactttcgcgaggacgaaaaatcg
cgaaattcacgacatttactttcgcgaatttaacgtaaaatatttttcgc
gagcataaactttcgcgaattaagacgtaaaattgagaattttgacatga
aaaatggtttagagggacaaatacttcttgaattttcctttgacttatta
gtcttttatcgggctaaaaagtgccataagagttacattttattcagaGT
TTGAAGTTtcacagattttctattttgtcaagaatttttcgcgcgAATGG
Ccattcctagaatttttaaagacatttactttcgcgaaaagggccaaaat
tcgcgaaaatcgcgaaagtttctgctcgcgaaagtttgtacgcctaaagt
agtttcAGCATTATTGAAACCCATCACGAGGTTTCAAGATGTTAATTGCC
TCCTTTTGTTGGCAAGTTATACAAACTTTTCCCATACTGAAAGGGTTCTG
CCTCTAATTCCATCTTGTTATTCTAATTTCAAGGTCTTTTGAATGTTCAG
AATCATGATTATGAGAACAAgcattattttttatctttttagaaaaattc
tcATTTGGCTGCAGCAAAATGTTGCGAGAACGAGTTTTCTTCGAAAGAAC
AGTTGGACCAATGCATGAAGCGAAGTTTTGTGCCAGCACAACAAGTCCAA
GAAATGATGAGTCGTGAATTATCCGAATTCCAAGTAAGTGAATCTCGTAA
ATACTTATTAAAATAAATTCTTACATATTCAATTGTTAagcaaaacatta
aaaacataGATAAAATAGAGAATTCTACTCACTTTAAATCGCCGTCCTAA
ATGTTCAAGGTCCCTGATGCAGGAGTGCTAAATATAGTAACGATTAAAAA
CCATGGTTTGCAACGACATGatcaaatttcgattttgcCTCATTTCAAGC
AGTCTGAAGAATCAGATTCGAAAGAGTCCTTTGCACTTTGTACTTTGTTG
AAATATTACCCTGGCTAAGCCTTTATGACGAAAACTTATTTCAATTTGAG
ATATATCTGGTTCTTGAAACTTGTTTCAAAATCATCGCCATATCCCTTTA
AAGCAGAGCGcggaatggatgatctgttttTATCTGAGATTAACTCTAAC
CCAGTTAAGGGTCTCTACATATAACCTACCTTATTGGTGTACAATTACTT
AAGAATGATCTAATTATCAGGCTAACCATAAGTAGAATCAACTACTTGAA
TGATCTAAGTAATTTAACTTGTTCAGAATGTCTATGAGTACTCTTTATAG
GgaattaaaatttcgaaatacTCGTATTTAATATTTCAGAATCGACTGAA
CCGTTGTGCACAGCGTTGTCAAGACGAAGCTAAAGACAAACTTCCAGTTA
ACCCGAACCAAGGTGACATATCGGTAGCAGAGGGATATATGAACACTTGT
ATTAGTAATTGTTGTGACTCACATATCGATCTGATACCCAAAATCATGAG
GCGAATGAAACAAGCCATGGACCAAATATAATGTGAAGTGAACGAATAAG
AAAGCCTTTAGAAACGACGAAACTTTAGCTGTTCGTTTGAACGGTGGTTA
GAACTATTTACAAGACGTCTTAATTGATTTGAGTGTTGTGTACAGGGGAT
AATGGCGTGAACTTCATCATTTGCCGTACTCCAATGGTTTGAAAGTTGAG
GATTAGAGACTCTTTAGAGAAAATAGAACTCCTGATTTCAAAGCATGAAT
ATGAATACAAGGATGAACATGAGCTTGGTCAGTTAGTTTTCCTTACTTTA
TATATAttactccattaagaattagtgaattagataacttttaaaatata
ttgatacATGGCTCTGGTTCTTAACTAATCGAGCACTCTTATGACATTGA
TTTACCTCACTTCTTGTTTTTACTTGAATATATTATTATGTTTGTAGGAC
AATTGAAGAGGTATAGCTTCTcctttagatttttattttgtgaattGATG
CCAACTCTTCGaaaattgacttcaaaattCATGCGTTCCGATACCCTCCA
TTTATACCATCATTCACACCAATTTTTGAATTGATGATGAAATTTTCCTT
AGTGCTATCagaataaaccagccgaggctggaaggtcagccaatagagct
tagctagatagctttaataagtgggttaacagatgtaagagatgtact Coding sequence (CDS) from alignment at scaffold_369:210890..230737+ >TCONS_00062557 ID=TCONS_00062557|Name=TCONS_00062557|organism=Clytia hemisphaerica|type=CDS|length=1260bp|location=Sequence derived from alignment at scaffold_369:210890..230737+ (Clytia hemisphaerica)
atggcggaAGCAGCACAAGCTCGTGTGCAACATGCAGTTGAAGAAATGTT
GGAAtctcttgaaaaagaaaagctaAGACCGCTTCTTaaaaattctcATT
TGGCTGCAGCAAAATGTTGCGAGAACGAGTTTTCTTCGAAAGAACAGTTG
GACCAATGCATGAAGCGAAGTTTTGTGCCAGCACAACAAGTCCAAGAAAT
GATGAGTCGTGAATTATCCGAATTCCAAAATCGACTGAACCGTTGTGCAC
AGCGTTGTCAAGACGAAGCTAAAGACAAACTTCCAGTTAACCCGAACCAA
GGTGACATATCGGTAGCAGAGGGATATATGAACACTTGTATTAGTAATTG
TTGTGACTCACATATCGATCTGATACCCAAAATCATGAGGCGAATGAAAC
AAGCCATGGACCAAATATAAatggcggaAGCAGCACAAGCTCGTGTGCAA
CATGCAGTTGAAGAAATGTTGGAAtctcttgaaaaagaaaagctaAGACC
GCTTCTTaaaaattctcATTTGGCTGCAGCAAAATGTTGCGAGAACGAGT
TTTCTTCGAAAGAACAGTTGGACCAATGCATGAAGCGAAGTTTTGTGCCA
GCACAACAAGTCCAAGAAATGATGAGTCGTGAATTATCCGAATTCCAAAA
TCGACTGAACCGTTGTGCACAGCGTTGTCAAGACGAAGCTAAAGACAAAC
TTCCAGTTAACCCGAACCAAGGTGACATATCGGTAGCAGAGGGATATATG
AACACTTGTATTAGTAATTGTTGTGACTCACATATCGATCTGATACCCAA
AATCATGAGGCGAATGAAACAAGCCATGGACCAAATATAAatggcggaAG
CAGCACAAGCTCGTGTGCAACATGCAGTTGAAGAAATGTTGGAAtctctt
gaaaaagaaaagctaAGACCGCTTCTTaaaaattctcATTTGGCTGCAGC
AAAATGTTGCGAGAACGAGTTTTCTTCGAAAGAACAGTTGGACCAATGCA
TGAAGCGAAGTTTTGTGCCAGCACAACAAGTCCAAGAAATGATGAGTCGT
GAATTATCCGAATTCCAAAATCGACTGAACCGTTGTGCACAGCGTTGTCA
AGACGAAGCTAAAGACAAACTTCCAGTTAACCCGAACCAAGGTGACATAT
CGGTAGCAGAGGGATATATGAACACTTGTATTAGTAATTGTTGTGACTCA
CATATCGATCTGATACCCAAAATCATGAGGCGAATGAAACAAGCCATGGA
CCAAATATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062557-exon-scaffold_369-1491911889:210890..211116 | TCONS_00062557-exon-scaffold_369-1491911889:210890..211116 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1510915933:210890..211116 | TCONS_00062557-exon-scaffold_369-1510915933:210890..211116 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1575043694:210890..211116 | TCONS_00062557-exon-scaffold_369-1575043694:210890..211116 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1491911889:229132..229272 | TCONS_00062557-exon-scaffold_369-1491911889:229132..229272 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1510915933:229132..229272 | TCONS_00062557-exon-scaffold_369-1510915933:229132..229272 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1575043694:229132..229272 | TCONS_00062557-exon-scaffold_369-1575043694:229132..229272 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1491911889:229879..230737 | TCONS_00062557-exon-scaffold_369-1491911889:229879..230737 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1510915933:229879..230737 | TCONS_00062557-exon-scaffold_369-1510915933:229879..230737 | Clytia hemisphaerica | exon |
| TCONS_00062557-exon-scaffold_369-1575043694:229879..230737 | TCONS_00062557-exon-scaffold_369-1575043694:229879..230737 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:210890..230737 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR008560 | DUF842_euk |
Blast
BLAST of TCONS_00062557 vs. Swiss-Prot (Human)
Match: F136A (Protein FAM136A OS=Homo sapiens GN=FAM136A PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.328e-20 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 3
Query: 141 MAEAAQARVQHAVXXXXXXXXXXXXRPLLKNSHLAAAKCCENEFSSKEQLDQCMKRSFVPAQQVQEMMSRELSEFQNRLNRCAQRCQDEAKDKLPVNPNQGDISVAEGYMNTCISNCCDSHIDLIPKIMRRMKQAMDQI 557
MAE Q RVQ AVE M++SLE+E +R + +A CCE+ +S +Q+ QC++R VP Q Q +++ EL +FQ+RL RC C D+AKD + + + + +++C++ C D H+ LIP + ++MK+A+ I
Sbjct: 1 MAELQQLRVQEAVESMVKSLERENIRKMQGLMFRCSASCCEDSQASMKQVHQCIERCHVPLAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQV---KQQLDSCVTKCVDDHMHLIPTMTKKMKEALLSI 136
The following BLAST results are available for this feature:
|
