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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062585 ID=TCONS_00062585|Name=TCONS_00062585|organism=Clytia hemisphaerica|type=transcript|length=900bp
gttgatgatgatgaatagTAAACGATATAATGAATAATGCAAAGGAGGTT
GGGACTGAGCCAACACGATGTTAATGAACTGAAAAATGAATAGACGTCAA
TAGAGTGGGGCTCAGGCCCTCGAGCTCAGACCTCTGAATAGGGCGAGAGA
TTATGAGtgagaaaaggaaagaaatcagGGACTTGAAAAGGAGAACTTGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAATAGGGCGAGAGATTATGAGtgagaaaaggaaagaaatcag
GGACTTGAAAAGGAGAACTTGAAGGAGAAGGACTTGAACAGAGACTATCG
TTAATTACATGCCATAGTTACTAAGTTATTTGAAGTTATTTATGTTACGc
ttatttgatatttattgaaaaaagatcTAACTTCCCTTCGTCACACTGAA
GGTGAaccagaagaagaagaagaatcaaAGATCCAAAAGGAGGAAGCTAC
ATTACACCAAAGAACGAGAACAGTAAGAGATTGTAGTAGAGTACTACTTA
GTTACACAGAAACTGAACTATAGTTGATTGGTAGTTTGGTTGATTTCACc
atagtataagaaagccgcggctggaatgataacatctgaatttctgttgt
tctatctctgtcgtatttgatgactatttgttgatcaagaaatcagtaat
ttAGCATATTTAAtagtaaattttattggtttgtcgttaataatTACTTc
gcagtgcgttttagacattaatgatatgcccttgataatacacttgcatt
ataatatcattgtgcaggaaagatcaacaataagAAATTTAAACAAGCAC
AAAATGGCTGGGCTGAAAGAACTAAAAAATTAATAAGGTGCCTTGAAATG Run BLAST on NCBI transcript from alignment at scaffold_369:350347..351246 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062585 ID=TCONS_00062585|Name=TCONS_00062585|organism=Clytia hemisphaerica|type=transcript|length=900bp|location=Sequence derived from alignment at scaffold_369:350347..351246 (Clytia hemisphaerica)
CATTTCAAGGCACCTTATTAATTTTTTAGTTCTTTCAGCCCAGCCATTTT
GTGCTTGTTTAAATTTcttattgttgatctttcctgcacaatgatattat
aatgcaagtgtattatcaagggcatatcattaatgtctaaaacgcactgc
gAAGTAattattaacgacaaaccaataaaatttactaTTAAATATGCTaa
attactgatttcttgatcaacaaatagtcatcaaatacgacagagataga
acaacagaaattcagatgttatcattccagccgcggctttcttatactat
gGTGAAATCAACCAAACTACCAATCAACTATAGTTCAGTTTCTGTGTAAC
TAAGTAGTACTCTACTACAATCTCTTACTGTTCTCGTTCTTTGGTGTAAT
GTAGCTTCCTCCTTTTGGATCTttgattcttcttcttcttctggtTCACC
TTCAGTGTGACGAAGGGAAGTTAgatcttttttcaataaatatcaaataa
gCGTAACATAAATAACTTCAAATAACTTAGTAACTATGGCATGTAATTAA
CGATAGTCTCTGTTCAAGTCCTTCTCCTTCAAGTTCTCCTTTTCAAGTCC
ctgatttctttccttttctcaCTCATAATCTCTCGCCCTATTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCAAGTTCTCCTTTTCAAGTCCctgatttctttccttttctcaCTCATAA
TCTCTCGCCCTATTCAGAGGTCTGAGCTCGAGGGCCTGAGCCCCACTCTA
TTGACGTCTATTCATTTTTCAGTTCATTAACATCGTGTTGGCTCAGTCCC
AACCTCCTTTGCATTATTCATTATATCGTTTActattcatcatcatcaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062585-exon-scaffold_369-1491911889:350347..351246 | TCONS_00062585-exon-scaffold_369-1491911889:350347..351246 | Clytia hemisphaerica | exon |
| TCONS_00062585-exon-scaffold_369-1510915933:350347..351246 | TCONS_00062585-exon-scaffold_369-1510915933:350347..351246 | Clytia hemisphaerica | exon |
| TCONS_00062585-exon-scaffold_369-1575043694:350347..351246 | TCONS_00062585-exon-scaffold_369-1575043694:350347..351246 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:350347..351246 . |
Blast
The following BLAST results are available for this feature:
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