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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062599 ID=TCONS_00062599|Name=TCONS_00062599|organism=Clytia hemisphaerica|type=transcript|length=1138bp
GTGAAGGGTGTCGTCAACAATACGTTCTTTGCGATGGAAGTCTGTCAGGA
TGGTGTCGAAACGTCTGTTGTAGCCATCTCCTGAAGATAAGAAGCCTTGT
GGTGCACGCTTGTAACGAAACCGGCCTATAGGTGTGATAAATGTTGTTAA
GTGGTNGTCGAAACGTCTGTTGTAGCCATCTCCTGAAGACAAGAAGCCTT
GTGGTGCACGCTTGTAACGAAACCGGCCAATAGGTGTGATAAATGTTGTC
AAGTGGCGGTCAGATTGGCGCAAAGGAAGGCTGTGATAGCCATTCCAAGC
ATCTATGACGGTTTTCCAGGTATTTCGAGGAATGCGTCGTACTATATGAA
AAGGTTGTTCTGAATTGTGGGTCTCCCTCTTACAAAACTTATTCAGTGGT
GATAGGTCGACGGTTCTACGACGACCATGTGGTGACACCAGTCCGATGGT
TCTCCCAATGGCACCGGCTCGATTACGTCAAGGGCAACATCACGAGCAAG
GTCTGCGTATACTTTGTCTTTCCAGTGGATTGGTACAGGTATGGCTTTGT
GATGGGCGACTGGTACCGCATCATCTTTGATGTGGATCTCGACGGGAGGA
CCGTCCATGCAAGGAAGCTGTTGGTGTGGACAGGTGTTGAATGTAGAGCT
CCCATAGTAGTCGAGGAGCCAATCACGCATGCGAGTGCTGTTCTCAGGGA
TGCAGGGAAAGGGCAGTTCTTTAGGGCGGGAAGGTGGTGCAGTTCGTATG
GGGCAGTCACAAATGCCCCCATCGCTCTTGGTTGCACCACAGATTGATCC
AACAGGCATGTTTGCGTTTGCCTGAGGGGAAGAGGATGATTCTTTGCTTG
TTGGATTGTTATTAAATGCTCCAACAGTTGGAAAGTCACGATTAATTATA
CCGAGCTGAAGCATGGAGTCGTATGAAAGGTATAAATGCTTAACATCGCG
ACTGACGTAAACCATCGAGCGGCAAGATACTTTGTTCCTGCTTTCCACTG
CACCTGTCATTCTGGCACGGAAGACTCCATCGATCCTAATCGGTGATTTG
TTGGCTGCGTCCAGGGAGAGGGCGGCAGGTGATAGATCTGACATCTCGAA
TCCAGCCTTCAGGAAGAGTTCTAGGGACCAGATATCGG Run BLAST on NCBI protein sequence of TCONS_00062599-protein >TCONS_00062599-protein ID=TCONS_00062599-protein|Name=TCONS_00062599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=247bp
DIWSLELFLKAGFEMSDLSPAALSLDAANKSPIRIDGVFRARMTGAVESR
NKVSCRSMVYVSRDVKHLYLSYDSMLQLGIINRDFPTVGAFNNNPTSKES
SSSPQANANMPVGSICGATKSDGGICDCPIRTAPPSRPKELPFPCIPENS
TRMRDWLLDYYGSSTFNTCPHQQLPCMDGPPVEIHIKDDAVPVAHHKAIP
VPIHWKDKVYADLARDVALDVIEPVPLGEPSDWCHHMVVVEPSTYHH Run BLAST on NCBI transcript from alignment at scaffold_369:453525..454662 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062599 ID=TCONS_00062599|Name=TCONS_00062599|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_369:453525..454662 (Clytia hemisphaerica)
CCGATATCTGGTCCCTAGAACTCTTCCTGAAGGCTGGATTCGAGATGTCA
GATCTATCACCTGCCGCCCTCTCCCTGGACGCAGCCAACAAATCACCGAT
TAGGATCGATGGAGTCTTCCGTGCCAGAATGACAGGTGCAGTGGAAAGCA
GGAACAAAGTATCTTGCCGCTCGATGGTTTACGTCAGTCGCGATGTTAAG
CATTTATACCTTTCATACGACTCCATGCTTCAGCTCGGTATAATTAATCG
TGACTTTCCAACTGTTGGAGCATTTAATAACAATCCAACAAGCAAAGAAT
CATCCTCTTCCCCTCAGGCAAACGCAAACATGCCTGTTGGATCAATCTGT
GGTGCAACCAAGAGCGATGGGGGCATTTGTGACTGCCCCATACGAACTGC
ACCACCTTCCCGCCCTAAAGAACTGCCCTTTCCCTGCATCCCTGAGAACA
GCACTCGCATGCGTGATTGGCTCCTCGACTACTATGGGAGCTCTACATTC
AACACCTGTCCACACCAACAGCTTCCTTGCATGGACGGTCCTCCCGTCGA
GATCCACATCAAAGATGATGCGGTACCAGTCGCCCATCACAAAGCCATAC
CTGTACCAATCCACTGGAAAGACAAAGTATACGCAGACCTTGCTCGTGAT
GTTGCCCTTGACGTAATCGAGCCGGTGCCATTGGGAGAACCATCGGACTG
GTGTCACCACATGGTCGTCGTAGAACCGTCGACCTATCACCACTGAATAA
GTTTTGTAAGAGGGAGACCCACAATTCAGAACAACCTTTTCATATAGTAC
GACGCATTCCTCGAAATACCTGGAAAACCGTCATAGATGCTTGGAATGGC
TATCACAGCCTTCCTTTGCGCCAATCTGACCGCCACTTGACAACATTTAT
CACACCTATTGGCCGGTTTCGTTACAAGCGTGCACCACAAGGCTTCTTGT
CTTCAGGAGATGGCTACAACAGACGTTTCGACNACCACTTAACAACATTT
ATCACACCTATAGGCCGGTTTCGTTACAAGCGTGCACCACAAGGCTTCTT
ATCTTCAGGAGATGGCTACAACAGACGTTTCGACACCATCCTGACAGACT
TCCATCGCAAAGAACGTATTGTTGACGACACCCTTCAC Coding sequence (CDS) from alignment at scaffold_369:453525..454662 >TCONS_00062599 ID=TCONS_00062599|Name=TCONS_00062599|organism=Clytia hemisphaerica|type=CDS|length=744bp|location=Sequence derived from alignment at scaffold_369:453525..454662 (Clytia hemisphaerica)
GATATCTGGTCCCTAGAACTCTTCCTGAAGGCTGGATTCGAGATGTCAGA
TCTATCACCTGCCGCCCTCTCCCTGGACGCAGCCAACAAATCACCGATTA
GGATCGATGGAGTCTTCCGTGCCAGAATGACAGGTGCAGTGGAAAGCAGG
AACAAAGTATCTTGCCGCTCGATGGTTTACGTCAGTCGCGATGTTAAGCA
TTTATACCTTTCATACGACTCCATGCTTCAGCTCGGTATAATTAATCGTG
ACTTTCCAACTGTTGGAGCATTTAATAACAATCCAACAAGCAAAGAATCA
TCCTCTTCCCCTCAGGCAAACGCAAACATGCCTGTTGGATCAATCTGTGG
TGCAACCAAGAGCGATGGGGGCATTTGTGACTGCCCCATACGAACTGCAC
CACCTTCCCGCCCTAAAGAACTGCCCTTTCCCTGCATCCCTGAGAACAGC
ACTCGCATGCGTGATTGGCTCCTCGACTACTATGGGAGCTCTACATTCAA
CACCTGTCCACACCAACAGCTTCCTTGCATGGACGGTCCTCCCGTCGAGA
TCCACATCAAAGATGATGCGGTACCAGTCGCCCATCACAAAGCCATACCT
GTACCAATCCACTGGAAAGACAAAGTATACGCAGACCTTGCTCGTGATGT
TGCCCTTGACGTAATCGAGCCGGTGCCATTGGGAGAACCATCGGACTGGT
GTCACCACATGGTCGTCGTAGAACCGTCGACCTATCACCACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062599-exon-scaffold_369-1491911889:453525..454662 | TCONS_00062599-exon-scaffold_369-1491911889:453525..454662 | Clytia hemisphaerica | exon |
| TCONS_00062599-exon-scaffold_369-1510915933:453525..454662 | TCONS_00062599-exon-scaffold_369-1510915933:453525..454662 | Clytia hemisphaerica | exon |
| TCONS_00062599-exon-scaffold_369-1575043694:453525..454662 | TCONS_00062599-exon-scaffold_369-1575043694:453525..454662 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:453525..454662 . |
Blast
The following BLAST results are available for this feature:
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