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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062601 ID=TCONS_00062601|Name=TCONS_00062601|organism=Clytia hemisphaerica|type=transcript|length=775bp
TTTGGTCTTGTAATCCAAGTGTCAAATTACGCCCAACTACGTGATTATAT
GGAACCCTTCAGACCTTTCCTCAGCCGACGTGTACAATTTCAGTGGTCTC
CCGAGCTCGATCTTGCTTTTCGACAATCCAAGGAGTCGATCATCCAAGCC
ATAAACGAAGGTGTTACTATTTTCGACCCAGCCCGCAAGACCTGTATCCG
TCCTGACTGGTCCCGTAAAGGTATCGGCTATTTCCTCTATCAGCAACATT
GTGAATGTCCAACCGATACACCAGATTGCTGCAAACTAGGATGGCGGATT
GTACTTGCAGGATTTCGTTTCTTGTCAACAACGCAACAACGCTACGCACC
TCTCGAAGGTGAGGCATTAGCTGTCGCTTGGTCGCTCGAACAGTCCAAGT
ATTTCACACAGGGCTGCCCCTCGCTTATCGTTGTAACCGACCATGAGCCT
TTGGTGAAAATCCTCGGAGACCGAACGCTCGACGAGATTACGAACGATAG
AATCTTTCGGCTGAAACAGCGAACACTGCCATGGTCCTTCAAGATTTATC
ATCTACCAGGGAAAACGAACCTTGCATCCGACGCCACGTCACGCTATCCA
TCGGCTGTCATTGGATTATTGACTTTTGCTGATCAGGTAGAAGATGCCAT
TAATGCGGCCATTCCTGCTGATACCAACGCTACTTTCAACATGAGCTGGG
ACCAGATCATTGTTGAGACAGCTAAAGATCCATCGCTTTCCCTCCTCCTG
AAGCACATACAGTCTGGCTTCGAGG Run BLAST on NCBI protein sequence of TCONS_00062601-protein >TCONS_00062601-protein ID=TCONS_00062601-protein|Name=TCONS_00062601-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
FGLVIQVSNYAQLRDYMEPFRPFLSRRVQFQWSPELDLAFRQSKESIIQA
INEGVTIFDPARKTCIRPDWSRKGIGYFLYQQHCECPTDTPDCCKLGWRI
VLAGFRFLSTTQQRYAPLEGEALAVAWSLEQSKYFTQGCPSLIVVTDHEP
LVKILGDRTLDEITNDRIFRLKQRTLPWSFKIYHLPGKTNLASDATSRYP
SAVIGLLTFADQVEDAINAAIPADTNATFNMSWDQIIVETAKDPSLSLLL
KHIQSGFE Run BLAST on NCBI transcript from alignment at scaffold_369:463399..464173 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062601 ID=TCONS_00062601|Name=TCONS_00062601|organism=Clytia hemisphaerica|type=transcript|length=775bp|location=Sequence derived from alignment at scaffold_369:463399..464173 (Clytia hemisphaerica)
CCTCGAAGCCAGACTGTATGTGCTTCAGGAGGAGGGAAAGCGATGGATCT
TTAGCTGTCTCAACAATGATCTGGTCCCAGCTCATGTTGAAAGTAGCGTT
GGTATCAGCAGGAATGGCCGCATTAATGGCATCTTCTACCTGATCAGCAA
AAGTCAATAATCCAATGACAGCCGATGGATAGCGTGACGTGGCGTCGGAT
GCAAGGTTCGTTTTCCCTGGTAGATGATAAATCTTGAAGGACCATGGCAG
TGTTCGCTGTTTCAGCCGAAAGATTCTATCGTTCGTAATCTCGTCGAGCG
TTCGGTCTCCGAGGATTTTCACCAAAGGCTCATGGTCGGTTACAACGATA
AGCGAGGGGCAGCCCTGTGTGAAATACTTGGACTGTTCGAGCGACCAAGC
GACAGCTAATGCCTCACCTTCGAGAGGTGCGTAGCGTTGTTGCGTTGTTG
ACAAGAAACGAAATCCTGCAAGTACAATCCGCCATCCTAGTTTGCAGCAA
TCTGGTGTATCGGTTGGACATTCACAATGTTGCTGATAGAGGAAATAGCC
GATACCTTTACGGGACCAGTCAGGACGGATACAGGTCTTGCGGGCTGGGT
CGAAAATAGTAACACCTTCGTTTATGGCTTGGATGATCGACTCCTTGGAT
TGTCGAAAAGCAAGATCGAGCTCGGGAGACCACTGAAATTGTACACGTCG
GCTGAGGAAAGGTCTGAAGGGTTCCATATAATCACGTAGTTGGGCGTAAT
TTGACACTTGGATTACAAGACCAAA Coding sequence (CDS) from alignment at scaffold_369:463399..464173 >TCONS_00062601 ID=TCONS_00062601|Name=TCONS_00062601|organism=Clytia hemisphaerica|type=CDS|length=774bp|location=Sequence derived from alignment at scaffold_369:463399..464173 (Clytia hemisphaerica)
CTCGAAGCCAGACTGTATGTGCTTCAGGAGGAGGGAAAGCGATGGATCTT
TAGCTGTCTCAACAATGATCTGGTCCCAGCTCATGTTGAAAGTAGCGTTG
GTATCAGCAGGAATGGCCGCATTAATGGCATCTTCTACCTGATCAGCAAA
AGTCAATAATCCAATGACAGCCGATGGATAGCGTGACGTGGCGTCGGATG
CAAGGTTCGTTTTCCCTGGTAGATGATAAATCTTGAAGGACCATGGCAGT
GTTCGCTGTTTCAGCCGAAAGATTCTATCGTTCGTAATCTCGTCGAGCGT
TCGGTCTCCGAGGATTTTCACCAAAGGCTCATGGTCGGTTACAACGATAA
GCGAGGGGCAGCCCTGTGTGAAATACTTGGACTGTTCGAGCGACCAAGCG
ACAGCTAATGCCTCACCTTCGAGAGGTGCGTAGCGTTGTTGCGTTGTTGA
CAAGAAACGAAATCCTGCAAGTACAATCCGCCATCCTAGTTTGCAGCAAT
CTGGTGTATCGGTTGGACATTCACAATGTTGCTGATAGAGGAAATAGCCG
ATACCTTTACGGGACCAGTCAGGACGGATACAGGTCTTGCGGGCTGGGTC
GAAAATAGTAACACCTTCGTTTATGGCTTGGATGATCGACTCCTTGGATT
GTCGAAAAGCAAGATCGAGCTCGGGAGACCACTGAAATTGTACACGTCGG
CTGAGGAAAGGTCTGAAGGGTTCCATATAATCACGTAGTTGGGCGTAATT
TGACACTTGGATTACAAGACCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062601-exon-scaffold_369-1491911889:463399..464173 | TCONS_00062601-exon-scaffold_369-1491911889:463399..464173 | Clytia hemisphaerica | exon |
| TCONS_00062601-exon-scaffold_369-1510915933:463399..464173 | TCONS_00062601-exon-scaffold_369-1510915933:463399..464173 | Clytia hemisphaerica | exon |
| TCONS_00062601-exon-scaffold_369-1575043694:463399..464173 | TCONS_00062601-exon-scaffold_369-1575043694:463399..464173 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:463399..464173 . |
Blast
The following BLAST results are available for this feature:
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