TCONS_00062602 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062602
Unique NameTCONS_00062602
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062602 ID=TCONS_00062602|Name=TCONS_00062602|organism=Clytia hemisphaerica|type=transcript|length=298bp
TTCGCTTCTTCCACTTTCAACACCTGCCCTCATCAGACCCTCGAGAAAAT
AGAGGGGCCACCTGTTGAAATCCACTTGAAGGAGAACGCAGTTCCTATAG
CCGTTCACACTCCTGCAAGCATCCCAATCCATTGGCAAGACCAAGTGCAC
AAGGACCTTTTGAGAGACGAGGCGAGGCACTTGGCGTTATCGAAAAAGTG
CCATATGGTGAACCAGTGACATGGTGCCACCGCATGGTCGTCACACGAAA
ACATGACGGCTCCCCAAGGAGGACTGTTGATTTATCTTCTCTGAACAA
Run BLAST on NCBI

transcript from alignment at scaffold_369:464677..464974

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062602 ID=TCONS_00062602|Name=TCONS_00062602|organism=Clytia hemisphaerica|type=transcript|length=298bp|location=Sequence derived from alignment at scaffold_369:464677..464974 (Clytia hemisphaerica)
TTGTTCAGAGAAGATAAATCAACAGTCCTCCTTGGGGAGCCGTCATGTTT
TCGTGTGACGACCATGCGGTGGCACCATGTCACTGGTTCACCATATGGCA
CTTTTTCGATAACGCCAAGTGCCTCGCCTCGTCTCTCAAAAGGTCCTTGT
GCACTTGGTCTTGCCAATGGATTGGGATGCTTGCAGGAGTGTGAACGGCT
ATAGGAACTGCGTTCTCCTTCAAGTGGATTTCAACAGGTGGCCCCTCTAT
TTTCTCGAGGGTCTGATGAGGGCAGGTGTTGAAAGTGGAAGAAGCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039231XLOC_039231Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062602-exon-scaffold_369-1491911889:464677..464974TCONS_00062602-exon-scaffold_369-1491911889:464677..464974Clytia hemisphaericaexon
TCONS_00062602-exon-scaffold_369-1510915933:464677..464974TCONS_00062602-exon-scaffold_369-1510915933:464677..464974Clytia hemisphaericaexon
TCONS_00062602-exon-scaffold_369-1575043694:464677..464974TCONS_00062602-exon-scaffold_369-1575043694:464677..464974Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:464677..464974 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.450563	0	1.07328	0.848118	1.02322	0.667226	1.72446	2.3261	1.36316	1.32511	1.32327	1.06839	0.566584	1.00907	0	0.438697	0	0.442654	0.384747	0.562998	0	0.414811	0.510596	2.66915	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062602 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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