TCONS_00062728 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062728
Unique NameTCONS_00062728
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1438

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062728 ID=TCONS_00062728|Name=TCONS_00062728|organism=Clytia hemisphaerica|type=transcript|length=1438bp
CCAACGGGAAGCCgtaatggaggcgcaatcagtcctgattacccatgatc
catttcgaccgtgaaatggcctattatTGAGGAAAGCGCTGTTtcttatc
tttgtgagtgagtccacctttagaatattggccgtagtacgcccgcagcc
aaacacccacgccataatttgcgccccaaaagtaTTGCCCGGATAAACTA
CGAAATGTAAAACATACGGAAACTGAAAgacgacaaaaacaaaaaaacag
cgaaaaaatttaACCCGCCTCTCACTCATCGCGAAACTATTAAGCCACCT
ATGCTCCGCTGCGCTCCGCCCGGTGGCAAAAAATAAACAGATCGGTTGAA
AAAGTTATGAAATCTAGCCTGGTAAGATAAAGATATGGCGGCCAGAGCTG
CTGCTACTGCAACTGTTAGAGCTGTAAAACCTGGGAAATTCAGAGCAAGA
CGAGCTGCAATAACACTGACGTCAAGTGCTGTTAACAGAGTCAAAGAATT
ATTATCTGAAAGTCCTGAATCGaTTGGTCTACGAATAGGAGTAAAAGAAA
GAGGCTGTAATGGACTTTCGTACACACTCGATTATGTGACagagaaaaag
aagtttgacGAAATTGTCAACCAAGATGGTGTTAAGATTCTGATTGATTC
GAAAGCCCAATTATCATTGCTCGGTACAGAAATGGACTTTATAGAAGGAC
TCATAGCTAGtgaatttgtttttaataaTCCCAACATTAAAGGAACTTGT
GGATGTGGTGAAAGCTTTCATTTATGATGTCGTTTACAGCTGatgttgta
ttttgtttttaaaatgaaattggcGTTTCTAAAAGGTATACATACGTGGT
GATATGTACTTCACTGATTGGTAAACTCTTTCACTCGTCTACATCACTTT
GCATCATTTGTTTTGGTACTGTTAGCATACCGATAACAATGTTTTTGGAT
GATAAACATGCTATATTAGTGATTGGAGAATTAGTTCACAATATTGAGAA
CAATTATTATCTACATGAAATTTCGACCGTATGATTGGACTCTGTTGTTT
CCTTAAGACCTAACACCAAATGCATCCTAAGGCTTAAACTCTTTTAGATA
CTTAAATATTTGGTTTGTGTTTGGTTTAAGCTGGAGAAGCTAGatggatt
ttgaatttttgatgaACACTTGCCCAATGAACAAGCATACAATCTACAAA
CTTCCTTTTTAAACGACCAATAAATTTCGCCTAAGTCTAAGATTTGTCTT
GAATTTGTATTGTGCTGATGTTATTATCTGAGGGTTAAAATCTGagttct
gtgtttttttttcatgcatTATTTACTTTACGCCGAgtgtatataatttt
tttgaatattgtcctttttttaaaaaagatctaTATTTTAATTTGTAACA
AATAAGTATtgttcatttgaaaaaaaagcatGCTAACG
Run BLAST on NCBI

protein sequence of TCONS_00062728-protein

>TCONS_00062728-protein ID=TCONS_00062728-protein|Name=TCONS_00062728-protein|organism=Clytia hemisphaerica|type=polypeptide|length=130bp
MAARAAATATVRAVKPGKFRARRAAITLTSSAVNRVKELLSESPESIGLR
IGVKERGCNGLSYTLDYVTEKKKFDEIVNQDGVKILIDSKAQLSLLGTEM
DFIEGLIASEFVFNNPNIKGTCGCGESFHL
Run BLAST on NCBI

transcript from alignment at scaffold_371:234102..251759-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062728 ID=TCONS_00062728|Name=TCONS_00062728|organism=Clytia hemisphaerica|type=transcript|length=17658bp|location=Sequence derived from alignment at scaffold_371:234102..251759- (Clytia hemisphaerica)
CCAACGGGAAGCCGTAATGGAGGCGCAATCAGTCCTGATTACCCATGATC CATTTCGACCGTGAAATGGCCTATTATTGAGGAAAGCGCTGTTTCTTATC TTTGTGAGTGAGTCCACCTTTAGAATATTGGCCGTAGTACGCCCGCAGCC AAACACCCACGCCATAATTTGCGCCCCAAAAGTATTGCCCGGATAAACTA CGAAATGTAAAACATACGGAAACTGAAAGACGACAAAAACAAAAAAACAG CGAAAAAATTTAACCCGCCTCTCACTCATCGCGAAACTATTAAGCCACCT ATGCTCCGCTGCGCTCCGCCCGGTGGCAAAAAATAAACAGATCGGTTGAA AAAGTTATGAAATCTAGCCTGGTAAGATAAAGATATGGCGGCCAGAGCTG CTGCTACTGCAACTGTTAGAGCTGTAAAACCTGGGAAATTCAGAGCAAGA CGAGCTGCAATAACACTGGTAAGACTTTCTGCTACTATTTCTTGATATTT GATAGGTTTTGGCGTCCAAAATTTATCATCTCTAGACTTTTCATCTCCAA TCGGTGATGACAAAATGGGCCAATATTTCTTATCAAAGTCCAAAGTGGAA AGGCAAGGGATGTTGTTAGCCGGGGTGATAGCTTCTTCTTAAAAGCAAAA GACACAAATATATTTTTTTGGATTTAGCGTACACTTGCCTAATTCCGGAC GGTTTTCAACAGTGTAGACCTAAAGCTGTAAACCAGCATCTAATAACATA GGAAAACCAGAATATGATTCTTCGATGGGAATCAAAACTATAAACCAGAC GTCCCCGCGCTCGATCGATCATCGGAACGGCTCGATGACGGATCGATGGA TTACTTAACAATCCGGATAGAAGATCGATAGAGGATCGATACTCAAGATT CTTTTAAGCTTATGATTAGTTATCGATTATTTATCGATCTTTTATCGATC TTATCGACCCTATCGACTCATACTCGATTTACGATCGATAACAAATCGAT TAACGATCAATGACGAATCGATTAACGATCGATGACGAATCGGTATACTC GATTGAAATACTAGCTCAATAATGGATCAACGAAGGATCGATACTCAAGA CTTTTTAATGGCTGAATCTTCCATCGATCTCCTATCCGGATCGTTAAGTA ATCCATCGATCACATAACCATCCGTCATCGCGCCGTTCCGATGATCGATC CTATCGAGCGCGGACGTCTGGTATAAAGTGCACTTACAAACATCAATTTG TCAGATCTAACAAAATTAATAACCGCACTGTCATCATTGACAATAAAACA AACAATTTTCTGTCAACACAAGTGTTATACGCGTAAGCGAAATCGCGTAT TACGAACAACCTCTAAATTACTGAGTACAGGAGAAAAAAATCGAAATTCA AAATGGGGGCCAAGCCCACACTGATAACTATCAAAAATCTTTGTTTTTCA ATCAGCTATTGCAGCTCAATAAATCAATGAAATAATTTGAAATAAAAAGT AAACAAACCTTGAACCTTTCATGAATCCAAATAAAAAAAGTATTCATCTA AAGTGAAGATTACATTTCAAAATAAAACAATTTCCAAACCAACCTAAAGT CAGTATCTGCCAACTAAAAATTTCTCTGCGGGGTCACTGGCAAGGAGTTA CGACTTCAGACTTTAGATTCCAATTCTTGTATAGGCTGCAACTACACTGC CAAATCAGTGAAGTAAAGTTTGAAAATATTCTTTATTAGAAAAACAGTTA AAAGCAGTCAAAACGCAATTTACCTTCTTACCTCCTGAGTTTGTCTTTGT TATGCTAAAATATAACAAACCTTTGTCATGCTGTCTAATTACAAAAACCT CCAATCACTACTTCTCCGCCATCTTGTTTCACTTTAAATGCCGTGTTTTA AAATTCCTTACAGTAGCTACATTGTACGGAACAGGTTTTCTCCAGGTTTT TCAATCCCGGGATTAAACTACAAGGGCGGTTCCGCCCGCTTATTTTTCTT TCGGCGTTGAGCGCCCCGGGGATACTTAACAATAAAAGAGATTTTAAGAT TAATGTTGAAAAAGCATATTTTTACGATAAATTTAGGCGATACTCAACAA AAAATAAGGTGGTTTTAAACAAATCTAAGACAAATTGGCGTTTCTTTCTG TTCTAATATATGCAAATCATGTCGAAAAAAGAATATATTTCCACCTTTTC ATAATTCACTTTCGCTTTCGTGTTAGGCGATTCCAATTGGATAAATACCG CTCGCTAACAAATTCTGATTGGCTGTAAGTTTTTAGCTTCGGGATTCTGA TTGGATCATTTCCCGCGTCACGGTTGAATTTTGATTGGTTGAAAGTTTCT GAGCGTGAATTCTGATTGGATGAATACCTGAAAANNNNNNNNNNNNNCAG GGGGGGTCATGCAGTTAGTACCAGACACGTTGACGGTTAGTACCGTGGTG GGTCATTTTCATTTTAAGGATTTTGCAGTTAGTACCTACTGGGTACTAAC TGCTGAAAGGGGGTGGTATCTCAAAATTTTTCAAAAAATCAATTAGTACT TTAGGGTACTAACTGCTGAAAGGGGGCGGTATCTCAGAATTTTTCAAAAA ATCAATTAGTACTATAGGATACTAAGTGCTTGAAAATGGGTTGCTGTCTA CTGTCTGCCTTTTAAAAAAAGTCTTAGCTGAAATATTTTGACATTACTCA CTCAAATGTTTTGACCTTACAATGTCTTCTAATTTTACAATGAACTATAT ATCAGACACTTTGCAGTGTCTTCTATTCACAGGATGAAAGACACACCCGA CACGCCACATTCGATTTCATTTGTTTTGATTCAGTTTGATTTTGTAGTGT CTTCTTTTTTTGATAACAAGAGATTTGACTGGATTTGATGCAAAAGTCAG ATGGCTGATTTGAACATATTTGAAGAGGTCTTATAAACTTTTAGTGAAGT TAGAGATGTTTAAAATCACAATGCTTTAAAGCCTTCTGCTTTGACGTGGC GCTTTTTTATAGAAAGTCCTGAAAAGGGTTTGTATAACTTCTACCTTTCT GAAATTTAGGCAATTCTTACAACCATTTTCTAATTAACTTAAATTGTATG TATATCAATGCTAATATAAGCAATTCTTCTTTTCCTCCATTCTTTCTCCT TTTCTTTTCATCAAACACACACAAGAGAATGACGTTCCATTTACGATAAT TTCGAATGTTTTATTAAGGAAATCGAATGTTTTGAGCGTTTAATTCGAAT GCCTTTTTTTTTTGTTGAGTGAGGAGAGACGAAGCACAAAACAAGAATCT TCTTTTACTTGGAATTATTTTTAAATTTTTAAAGTCCTGTTAGTTTGAGC TTTAAACCATAGTAGTTATTAATTATACCAAAGCACAGAAAAGGTTTTTT TATGACTGTTTATGAGCTTATTCCGGGTCATTTAGAGCCGAAAACAGGGG AATCATTCTTTTCTATGTAAAACAAATAGTATCAGAGGCAGTCAGAGGTG CTTACTGCTTAATTAGGGGTGGTATTCAATTTTGGACCCCAAATGCAGTT AGTACTTTAGGGTACTAACTGCAGAAGGGTGGTGGGTGTATTTCAAAATT TGGATTTTGCAGTTAGTACACATAGTGTCTGNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTTATTTACTTTGC ATGACAATAATTAAGCCTACAAAACACCGAGAAAAAAACCCAACATAGAA CAGGTGTATTTTGTAATGTAGAATATGATAGCTTAAATCTTTTTGAAATT CTATGTCAGGATTTTTTCTCAATGCCCCGTAACTATTCCCGGGGTACCCG TTGCTAAGACCTTATGTTAAAAACGAAAGCGATTACGGCAAAAAGTAGCG ATTTTCGTAATACCTCAAATATTGATACTTGACTGTACTGCAAATGATCT GTATAACAAAGACTTCCAAATGGGTCCATAAGTTAAGAAAATGAGATTAT CAGCTAGCACGGGGGTTTTGTTTTTAAAAACAAACTTCAAAATAAAATTG TTAATGAACTTCTTACTTAAAATATCACTTACTTACATAATTTATTTATG ATATAACACCCCTTTCTTAAATAAATGGCCTCTTAGAGTCTTTTATGTTT GCCACAAGAAGGGAGAAAATTTAATTTGACCCCTGGTTTTTTTTCTCTTT TTCTAGCCATTTCCCGCGTGTTAGTGTAGACACAACTTTAATCCGGGGAA ATGAAGCGTTTTCATTGGTCAAAAATCACTGATGGTCACGTGACCAGAAT TTTTATCCAGGGGAATGCCGTGGCCCCAATGTTTTGCTTTAGTGAGATTG ACCATTTTGTTGTTTAGATTTGAGCGGGCGAAATTTTTGTACAAACCAAA ATATGGCTTCGTTGGAATACCGGTTGAAACACTTGTGTCAAGAGCCTTGT AAACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAGTCTACC ATTTTTAGCGCGGTCCGAGGATTGAGCTGAGAACGNTCAAGAGCCTTGTA AACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAATCTACCA TTTTTAGCGCGGTCCGAGGATTGAGCTGAGAACGCTCACGCAAACTCCTG CGCGGATGAAAAACTTCAATCTGTCAATCATTTTCTCAAACGAAGAGTTC GCGAAGCGGTTCTAGCTTAACGATAGTGCCGCGGGTCATCAATGGATAGT ATTCAATTATCATTATCCCTTTATTTTCATTCCTAGAACTTTTGCAAAGC AAAGGAAAAATAGAAAAGTTGTATTTTTTACTGTTCTATTCACATACTGA ATTTGAAAGATCCTCTATGCGGCGTTTTTTTGCAAACTTCAAAAAACTGA TTTTTGACCTGCCTTTGCGGGACTTTGGCTTAAGTGCTTGAGTGCAGCAT AGGGTACAAAGTCCAAACATGCGTTTCTCGTAATTTTTGTATGAAGAGTT AGGTCTACACTGTTCAATGTTTTCAATCAAATCTCAAGCACAAGTTTTCA AATGAAAATGTTTTTGACAGTTTCATCAATATGACCAAAACATTTTGTTC AGCCATCCTCACTCTAAGAGAGGCCATCACAGAATGAACTTCCTTATATA GTATGAACCATATTCATGTGTACACTCCATCACAGAGCCTATTTGAGATA TTTTACTAACTAGCCCAGAGAAAAATTTTAAACTTTTTATTATTTGAATG CATGCCTTTTTAATACTCAAATATAAAAAAATTAAAAAATGTTAACTTTG TTATTTGTCAAAAAAGTCATTTAAAATTGATTAGACTCTGCGATGGAGTG CAAGGCTGAAAAGCCACATGAATATGGTTCATCCTATAAAGGGAAGTTCA TTCTATGGTGGCCTATCTTGAAGTGAAGATGGTTGAACAAAATGTTTTTG GCATAGTGATGGAACTGTTTGATAAGAAGGGGGTCACTCATATATCAATT CTTCCCGCAACTAACGTCAAATTGACGCAAAAGGGTGAGGGGTTAGAGTC TGTGACGCCAAGAATTTTGGGTGGATGTCACTAGTCCGACACTTTCTAGT TCGACAGTAAAATAGTCCAAATCTATAAAATAAATTTACAATTTAGAAGT CTTTTTTTCCGATGTCGCTTTTGTCCGAAAACGAAAGATTTATTAAGCGG AGTGTCGAATGTTGAATAAGGGTTTTTCACTGAGATAATATTATAATAAA AGTTCATTTTGGCGGCATTTTGACATTAGAAATAAAGGACCAATCAAATT TGCGTAAAGATAATTTAAAGCAAAAAGAATGTACCGTCTTTAACGGTATC TTTTTGCATGTTCAGAATCATGCTATAAGGGTTGTAAATCACAAACTTTA ATTCCAGCCCCCCCCCCAAAAAAAAAAAGAAAGAAAAAAAGGAGGGTAGT AAAAATAGCTAAATCCAATTTCTTGACTTTTGAAAGCCTAATCCTAATAA GCTTCCCTAAATTTAAGAAAAGTCGTGTTTAGGGGTCCAACCTCAAAGTC AGAACTTTGGATTTTTATAAGCACGTGGTTGCTTATATTTATAAAAGATG TGCCTCCTCTTCGGCGATTCAAATTTCGTTTTATATGTTTTTTTGACTCA TTTTCGGTCAAAATTATTGTTGGAATACTGACGCATTCGTCAAATCCAAC GTCGGCCATTTTTACTGTCGGACTAGAAAGTGTCGAACTACTGACGACCT TCCAGAATTTTCACCAGAAATATTGATTTTTGTGCTTAACAAGCAATATT TCAGTGAGGCTGGAACTTCGACTTTTGAGGATTACGATTTTACCAGTTTT TTAGCAATTTTTGCCTCGCTAACCCAAATCTCGCAACCTCTTTACCTTAA GGAAGATCAAAATTAGAGTTTTTCAGTGTTCCGAAAAAAACGCACAGCAG AAATTTGTTCATCTTCACAGGGTCAAGATCGATTCTCAACAACAAAATAC ATCTTTTTGGTCTTTGGGTTTGTTTCTGACATTTTTCCTTCAGAGAATAT TGATCACTTTGATTTTCCCCTTGAGCGCGCAAGATAAAAATGATTAGCTT GCGTTTTCGCGCGGGCGAATAAAGATGAGGCGGCAATCTTGCACTGAGGG TGCTACTTAGTTTCCGCCCTATCATAGTGTGCACCCCCCCAGAATAGTGG GGGGGGTTTTGCTGATTTGGGTCGAAAATTTTCAGGTGGGATTTGGGGTT TTCCAGGTTTTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNGAGAAACAAGTTAAGGTGGGAGTTAATTTCTTTAGGT GGGACTTTGGGTGTTTTGGAAAAAGTTAAAGTAAAATTTCTTATTTTCAG ATTTTATGATTTTATGATATTTTTTATTCATATATTTCATAAATGTATAT AATAGACATATTGATATATTTTGGATTTAACAAAGGTTAAATTGCGGTTG AACTTTTATTTGATAAGCGCTATATACAGTATTCGAATGACTGGGTGGTT GCCCTCCGCCAACTGAGTCTACTTTGCTAATAGCCATGTGACGTCATGTT CAAAATGGCCATCACATCTCCCTGTTCAAGTCGACGCTATAACTGAAAGC TGACAGGATGAAATATTTTACCTCCCTCCCTCCCTGCAGTTATGGTTGTA GGCGATCCTCACTTATTCATACTAATATTGTAGTTATGGGGACAAATTTT CCCCAAAACTTCTTATTCGAGGATTAGCTATAATTTCATGCCAAACTTAT ATCTAACGACTCACACTTACTTCTAAGTCGTCTGACTACTTGATTGGTTT CTACCCCTAATGTAGGTCATAGGCAAATGGAAAGTTAAACATATGTAATA TATTGCATCTTCATATTACGGTAAAGAAATNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNCCTATTTTGCGCCCACGATAGAATGGTCCAAACACGGGGGTATTC CAAATGATAAACTATGTTGTTCTGTAAGTGTTTATTTTCTGAGAGATACA AATAGTATATTGAATATTATTAACTTATTTATTTAGGTATTCTTGAGTGC AAATCTTTATGGTTAAATAAAAAATAAATGATAACAGTTCCGTTTTATTC CTCAAACCCCCGGGAAAAGTTTTTTTGCCGACTTAGCTATTTTACAAATC TTGGAAAAGAATTCCCATAGGAATCCCGATACCTAACCTGATTGGTTAAT TTCGGAACAGCTTCAAGAAAGTCATATAATGGCAGATAATTTTAAAGGTT TCTGAGGCAATGTGTGTAATTTATCGATGATGATGGCTTGTTGATTCTTT AAGGAAAAAAGAAAACAGGTATATTCTAGAAATAGAAATACACTGTATTT CATTTGTCCAGAGATTTGCCGCCTTTAGCCAATATACGGCTAAAGTCATT TTTAGCTGGCAAGTGTCTACAAATACTGTCAACTGCTCCAACTTGGGACG AGTGGTCGCAACATGGGACTTGTTGATATCTGGCCCGTATTTCACTTAGG TTAAATGTCTTTGACAATATTTTTTGATTACTCCATCAAGTTTATCAATT GTACTTTCTGTCATAACATGTCACAATAACTTTCGCTGATAGTGTGCCCT TTTTAACTTTTGTTTTCATTCGAAATGACCGGACGCCAAATGGAGAATTA GAGAACGCCCACCGCCTAACCGCCTACAGCCCAATGGGATTAACAAATAA CAAGTGTGTAACTTGCCCCGCGAGTGACGTCAGAACGCTCCATCGTTTTG CCACTGATTTGATTTCTTCGTTCCAGACACTTGCGCGTGTTCCACTACGG ATTTTTTTCATATTTCGATTTAAAAGCCTATTCAGTGCGAAAGAGGAATC GTGTATTTTTTAATACGCGGTTCATTAAACTCAAATCAAATGACTTTGGA GGTTTGGTGAAATGGTGGTGGAATGGCCGTCCCATGTTATGATCGTTTTT GTGCCCATATCAATGTCAATCATATTATTAACTCACCAAGATTTTGAAAA ATACATTGAATTAACAAAAACTGAACCGGAAAGCGGTTGGTAGATCATTA AGCAGATCTATACTACCTGGGGTTTTGTAGAGGTCTGCGATTCAGACTTT TAACCAAAACAAACGGCTCGATGTTTATGTCTCGTGTTCCTTTTGTTTAG ACAATCCGCACGGCCCTTAAATTTTGCCAACAGTTGGTCTTTTTTTGTGA AATATCGCTCTTCTGTTGATTACAATTACGGAGTAAATTAATTCTGGCAA CTTTCCGAAAAAAAGTTTAGAAATTATCTCCATTACTTTTAAAATGTAAA CTGAGCAAGCTGTAGCGAAATTAAAGATGACTAACGAAACAACGATGAAA GTGAAGGAGAGAGTTTCATCAATTTTTGATAATTTTTAAACTTTGACATT AAGAGGTGGGGGTGGGGGGTTTTCAAATTAGCGTGAACTTGAAGTTAGTC GTGGCAAGAATCGATATGTGAGTGACCCCTAACTTGCATCAATGGAGGGA AACAGAACAAAATTCAACCTTTCTTTGTCTTTTTACCTTACAAAAATTTA CCGCTAAATAGATACAAACAATAAACATCAAGCTCCCAATGAGCTCTTCC AGTTAAAGTCTGTTACAAGGGGGGTAGACGTCGGGGGAATTCCGAGGCAA AATTTTTTTTTTTAATTCCTGGATTTCCAATACAAAATCAATTTTTTGGT GAAACAATCTGGAATTTCCGATACTTTTTTCAAAATTTTAACAAATTATT TTGAAATTTCCAAGGGTTTAAATAAAAAATTTAGTTGAATTTCCGAAGCA CTTTGAAAAATTGACTGGGTTTCCAAGTGCTTTTATTATCTGAAAATTCC TGTCGTCCACCCCCAATATCAAATTTTACCCCATCCTCCCGTGTACGCAA GCGTACGCAAATGGCTATACCCCCTGGTAAGTACGTACTTTTTCANNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAAGCGTACGCAAATGG CTATACCCCCTGGGAAGTACGTACTTTTTCCCCCCCCCCCCTCTGTTGAA GAAAATTTTGAATTCAAGTCGTTTGGTTTGGACCTTTATTTCATACATGA AACTCAATTTTAATTATAAATAAGAAACTTTTTCTTTTCCTTGATGTGTA TAAGAAGAGTAAAAGTCAACAAAAAACAAGCAAAAAAGGGCTATGAAAAA TTTTTCTCTTTGTACATACATTTACCTTTGACCCATCCCCTTCCCCTGTA CGCAAGCATACGCTTTTAAGAAGATCCCCTCCCCCTTAGTGCATATGTAC TACATGTTTTTTTTGTTATAAGCAAGTGTATGTCCCTTGGTCAGGCTTGT GTATGCTTAAAATCTCAAAGCATCCAGGCATAGGTTATGCTTATTATATG CTTATGAATCATGCTTATGATTCACCTCGAGCCAAGTTTTTAGTGAAATT TCAGAAATTTTGTAAAGATTTGTTCAGATTTTGGGAGCAGTGCAATCAGG GAAACCGTGGAAAGTCTTTTTTTTTACTTGACCTCTACCTTTTAAACAGA TAAAAATGACAACTGGAAAAATATTTCATATGCTTATGTTATGTTTAGGA ATTCTGCAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTATAAAG AAAACATGTATGTGGATGGCCCCCTAGTTAAAGCTGTAGTTAAGGTGTCC AGAGGCAAGTGTACGGTACATAAACACAGCAAAACAGTGGGATGTTAAAT TTTCAATATCTGTAAATTCCATTAATTTTTGGGCTCAAAATAGGCCTATT TTCACACATTTGGTTGCGCAAAAATTAAAGGGTGCGTGAATTAGTTATCG TTATTAACGTGTGGAAATCTTATCTTAGGGCTCTTTTAATAAAATGGGAC CTCTGTTCATGGTAAATATGCCCCTGGGATGTAAAATCTAGCTTGAATAC ACACTGAAAGTGAGTAAAACTCACTTTAAATCATCAAAAACACTCATTAA ATATCCCAGAAATTGCAAGATGCGCTAAACTTAAAGGATACGCTAAAATT AAAGGATGCGCAAATATTCTATTTTACAAGCTGTGTGAAAATTAAAGGTG CAAAAATTTGAGGTGCAAAAATTTAAGGCGCACAAAAATTAATGGAATTA AGGTATATATATATAGATTTGATATCTTCCTGACTCATGGCTTGAAAATC CATTATTCAGATTGCTTTTTTGCCGATCAACCAACTGGCTCTTTTTTTTA ACTAAAAATGGTGCGACCACAAGTTATTTGTGATCGCGACCTTATGTAAA GTAGAGAAATAGCAGTACAAAAACTTGAAGATAGTCTAACAAGCAGTTCT CAAAGGTAAAAAAAAGGTTGTAATCATGTATAATTAAGATTGAGTTTTTG GGCTATTAAAAGCCTTTTTTTTTCATTTTTGGATATGTTGTTAAGTACAA TGAACTGAGTAAAATCCCAAAATATTTTGGTCTGAAAATCCATGGTGGCG GATTTATGCCAATTTGAAGTTATTGACATTTATGGGCATTGCACTTAAAA AGTTTTTTGATATAGAACCATGCTTTCTCAATCCAAATGAGGAATTGATT TTTGGTGATTCTGAAACTATGGCCAGTAAACTATACAATTTTCAAAAAAA ATCTAAATTTTCAAAATGGTAGCTGGAGTTATGACGTCACAAAAGCACTG CAAATTTGATTTTAGGGGTATTTTAGAGCCATCTGACCTGTCCCAGGGGA GTTTGTTACTGCTCAAAACAATAATTTCTGGTAGTTTAGTCCCTGGTCTA TTCATTTGAAATGATTGCAATAAAAAATTCCTGCCCTACTGGCCCCCCGA AAAGCCAATAAGGTCTTAAAAAAAGTACCAACTTTAGCCCAATTTTCCTA GCAATCCCAGCAATCCCAACATTGTCTGACCTCCAACTCTTCTGTTCCTG AAAGACAACCGCCTGGTCTTTTAGGATCAAAAGAGAAACCTATGTGGTCT CCTACCATTAACTTTTTATCTTGATTTAAAAATTTTCTCAACATTGCTCG AACATTGCTACATTTTTAGCTGAAATTTTTGCCCAAAAGGAGTACCCATT GATACTTGATTCTTGATTTTGTGAAAGCATCCTATAGATAGTTCAAGAAT TTAACAGAAGTTGGAACCTTTTCCTTTTTTCTTAACTCTAAAATCCTAAA AATCTTGACAATGCTGCTCAAAACAACAATATTTGCTCAAGATTGAACAG AAAATGAGCCCACTAAGACAATGAAACCTTTGTTTTTGGAAAGTTTCATG GGGATAATACAAACATTCATCAAGATCTTTACCTCCTGATCTACTATTTA AGGATCAAGTCCGTCAAAATGTACTTCTAAACTCTCAAATCTTCAAAGGT GAACTTTACCAACCCCATAAAACAATTTAATGGAATATTTGATGAGGAAT CATGATTTTCAGATAAAATTTACTTTCTAACTGCCAATTACTGGCTGCAA TAGAATGACCTCAGCTCTAGTCAAAAATTAAAAAAAAAAAGCCTTTTTGG CCCAAAAAAGCACATTTGACAACTTTTTTCACTTAGTTTCATTGTTTTTA TATAAAAGATTCATCATATTATTATAGGAGTATATATCGCAGGTCTATTG ACCTCTATGAAACAATCTAATTCAAATTTACAGTTCATCAATAACGGTCT TTTTACATATTTTCTTAAAGTAGAGCTTAGCCCGAGGGCTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGATAAAT TTCTTGATGATAACCTCCTGTTTCTTCACCTCTTCCTTTGTGATATCTGC ATATGTTGCCCGTTTTGGTTCTTTAGCGACGTCTTCTTTGTACATAGCTA TAAGTTCCTCCATTCTCTTCTCTAGATTATGCAATCTAGTGTTGAAAACA GATTCAAATATTTGCTGACCTCCATCTTCACATTCTGCTTCCGTTATTTT TTGCGTTATTTGGTTACTTCTGACTCTTTGCTTACTTGTTTTGATTTTTT CCAAAAGTATTGGCGTGACTGTAACACATTTTTTACATTCGAAGCGTCGG CTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNCAGGATCCATATTTTTCAGCATTTTCAGTGGATTTTTCATCGATTGTT GCCATTCTTTTTCATTCATTCGCAAGAGCGTGGCCGTACATATTGTATTT GACGTAGCCCTTATATCATAACAAATTCAGTGACCTAGACCCCTTTGAAG TTTGCCAATGGGCCAAAATATCCCAAATTTTAGTCATTTTTCGAGCAATG TTAAGAAATTTTTAAATCAAGATAAAAATCAATGGTTGGAGACCACATAG GTTTCTCTTTTGATCCTAAAAGACCAGGTGGTTTTCTTTCAGGAACAGAA GAGTTGGAGGTCAGACAATGTTGGGATTGCTAGGAAAGTTGGTACTTTTT TGAGACCTTATTGGCTTTTCAGGCCTCTAGGGGCCAGTAGGGCCGGATTT TTTTATTGCAATCACTTCAAATGAATAGACCAGGGACTAAACTACCAGAA ATTATTGTTTTGAGCAGTAACAAACTCCCCTGGGACAGGTCAGATGGCTC TAAAATACCCCTAAAATCAGATTTGCAGTGCTTTTGTGCTTTTTTTTGCT TTTTGTACCATTTTGAAAATTTAGATTTTTTTTGAAAATTGTATAGTTTA CTGGCCATAGTTTCAGAATCACCAAAAATCAATTCCTCATTTGGATTGAG AAAGCATGGTTCTATATCAAAAAACTTTTTAAGTGCAATGCCCAAAAATG TCAATAACTTCAAATTGGCATAAATCCGTCATTATGGATTTTCAGACCAA AATATTTTGGGATTTTACTCAGTTCATTGTACTTAACAGCATATCAAAAA ATGAAAAAAATCTAAGTTTCAAACTATTGGACCTGCCCCACTCTTAAAAA AACTGGCTCTTAAGAGCCTTTTTTTTTTAATCTTCAAAATAAATAAAGTG TGCAGTGTGATACCTCATAAAATAAGACCCTGAAAGTTTTACCTTGATAT CTCAAGTAGTTTCTCAAGTGTCCTGTCAACACTTTTCACTGACTACCCAT ATATACTCACATAGCATAGGGGGAAAATCAAAATATAATAGCCGCATTCT TTTTCACCGTCCAACATACTCACATAGCATAGGTTGACCAATTCGAAAGT CCTTTCACTTGCCAAGTGAACTGCTGCATGTGGGGATCATACCTTAGTGG CCTGTGCAGCAACCAAGGTCAATGACAACCCTGTCAACGCACCGGACTTA CGATGGCTCTAGATGCGAAATATCCGGAGATATTTTTGTGCATATTCTAC ACTGTGCTACGTCCTGCAAACTTTCACGCATTGAGCATAATACTCGTGCA TTTCCATAATGTCTCACACATTTTTTGAGCAATTCGATTTTTCATGGTAG TTTTGATTCCAGTTTTCCAATTTTTCGAAAAATATTTCATCGATTTTCCT CCAAAATCCAAATTTATTAGTTTCTGGTAGCATGGTTTAAAATCATTACA TTTCAGATTCTCTTTATTTCAACCTCTAAAGTTGATGTTTTCGACTAAAT ATGAATTATATTTTAATACATTTTGTACCTGTTTTTTTTTTCTCCAACCC CTCCCCACTTATTTCAATTATATACATGGTAACTAAGCGAACCAATAAAT TCTTATCAATGTTTTTTTTCTTAATTGCAGACGTCAAGTGCTGTTAACAG AGTCAAAGAATTATTATCTGAAAGTCCTGAATCGGTAAGTAAATACAAAT CTATTAAAGAGGGTTCCTGGATTGAAGAATAAATTTGGGCGTAGCTGAAA GATAAGTGTTCGTATAATTCAAGGCTAAGTCATAGACAGTGATTTCATCC TTTTGATTTTAAATTCCTGACAGTCACTGTCTTGATTTTGTATCAAACTT TCTTTCCAAAAAGACAATAGTTATTAGGGGGTATGTAAATTTAAAAGAAA TGACTTTTTATGATGTAGCAATCATGTGAAAAGGTTAACAAAATGAATAG TTCCGCTACTGAATAGTTTCTAGCTGGCATGAAAATACATTTCGCAAGCC GAAAGAGTTTTTCAAGCTGTCCTTCAAAATGCTTTTTAATATAAACCAAA ATTTATGAAAAATTTAATTAATAGGTCCATAGAGCTTGCATTTCATTCCC AAAAATAAATGATGTCAAATGTTTTCCACGAATTTAACTAATATTATAAG CTTGTTTATCTTAATAATCTGCTAACTTTCATTGTAGAAACATTTTGAGC ACAAAATTAATTTTTTATAGATTGGTCTACGAATAGGAGTAAAAGAAAGA GGCTGTAATGGACTTTCGTACACACTCGATTATGTGACAGAGAAAAAGAA GTTTGACGAAATTGTCAACCAAGATGGTAAAATATTTGCTCCTTTTTATG ACAAAGCCAACTTTAGTTATTCCTGCCTGGTCAAAATAGAGGGTCACTTG CCATCACTTTCGTTGAGGTTTACTTCTAGTGCCGAAGAGCAAAGAGCGAT AACAACACTCCTCTTTAGGACTATAATTTTACCGTTGATATTGATTAGCC ACAAACTCATTACATTTTGTATTAAAGAAAAGAAGCAATAAACATAAACA TAGCGCCAACTAGCGGGAATTATTTTCTGGAATTTTCTGATAAGAACAGG TTAATAAACCATCTGAAGTTTCCAGGCTGCCAAAGCAACTGTATAGACGC CTTCAAGTTTAAACTTTAACTGGTTTGTTTATTTTCATTTATTTATAGGT GTTAAGATTCTGATTGATTCGAAAGCCCAATTATCATTGCTCGGTACAGA AATGGACTTTATAGAAGGACTCATAGCTAGTGAATTTGTTTTTAATAATC CCAACATTAAAGGAACTTGTGGATGTGGTGAAAGCTTTCATTTATGATGT CGTTTACAGCTGATGTTGTATTTTGTTTTTAAAATGAAATTGGCGTTTCT AAAAGGTATACATACGTGGTGATATGTACTTCACTGATTGGTAAACTCTT TCACTCGTCTACATCACTTTGCATCATTTGTTTTGGTACTGTTAGCATAC CGATAACAATGTTTTTGGATGATAAACATGCTATATTAGTGATTGGAGAA TTAGTTCACAATATTGAGAACAATTATTATCTACATGAAATTTCGACCGT ATGATTGGACTCTGTTGTTTCCTTAAGACCTAACACCAAATGCATCCTAA GGCTTAAACTCTTTTAGATACTTAAATATTTGGTTTGTGTTTGGTTTAAG CTGGAGAAGCTAGATGGATTTTGAATTTTTGATGAACACTTGCCCAATGA ACAAGCATACAATCTACAAACTTCCTTTTTAAACGACCAATAAATTTCGC CTAAGTCTAAGATTTGTCTTGAATTTGTATTGTGCTGATGTTATTATCTG AGGGTTAAAATCTGAGTTCTGTGTTTTTTTTTCATGCATTATTTACTTTA CGCCGAGTGTATATAATTTTTTTGAATATTGTCCTTTTTTTAAAAAAGAT CTATATTTTAATTTGTAACAAATAAGTATTGTTCATTTGAAAAAAAAGCA TGCTAACG

Coding sequence (CDS) from alignment at scaffold_371:234102..251759-

>TCONS_00062728 ID=TCONS_00062728|Name=TCONS_00062728|organism=Clytia hemisphaerica|type=CDS|length=1572bp|location=Sequence derived from alignment at scaffold_371:234102..251759- (Clytia hemisphaerica)
GTGTTAAGATTCTGATTGATTCGAAAGCCCAATTATCATTGCTCGGTACA
GAAATGGACTTTATAGAAGGACTCATAGCTAGTGAATTTGTTTTTAATAA
TCCCAACATTAAAGGAACTTGTGGATGTGGTGAAAGCTTTCATTTATGAA
TTGGTCTACGAATAGGAGTAAAAGAAAGAGGCTGTAATGGACTTTCGTAC
ACACTCGATTATGTGACAGAGAAAAAGAAGTTTGACGAAATTGTCAACCA
AGATGACGTCAAGTGCTGTTAACAGAGTCAAAGAATTATTATCTGAAAGT
CCTGAATCGATGGCGGCCAGAGCTGCTGCTACTGCAACTGTTAGAGCTGT
AAAACCTGGGAAATTCAGAGCAAGACGAGCTGCAATAACACTGGTGTTAA
GATTCTGATTGATTCGAAAGCCCAATTATCATTGCTCGGTACAGAAATGG
ACTTTATAGAAGGACTCATAGCTAGTGAATTTGTTTTTAATAATCCCAAC
ATTAAAGGAACTTGTGGATGTGGTGAAAGCTTTCATTTATGAATTGGTCT
ACGAATAGGAGTAAAAGAAAGAGGCTGTAATGGACTTTCGTACACACTCG
ATTATGTGACAGAGAAAAAGAAGTTTGACGAAATTGTCAACCAAGATGAC
GTCAAGTGCTGTTAACAGAGTCAAAGAATTATTATCTGAAAGTCCTGAAT
CGATGGCGGCCAGAGCTGCTGCTACTGCAACTGTTAGAGCTGTAAAACCT
GGGAAATTCAGAGCAAGACGAGCTGCAATAACACTGGTGTTAAGATTCTG
ATTGATTCGAAAGCCCAATTATCATTGCTCGGTACAGAAATGGACTTTAT
AGAAGGACTCATAGCTAGTGAATTTGTTTTTAATAATCCCAACATTAAAG
GAACTTGTGGATGTGGTGAAAGCTTTCATTTATGAATTGGTCTACGAATA
GGAGTAAAAGAAAGAGGCTGTAATGGACTTTCGTACACACTCGATTATGT
GACAGAGAAAAAGAAGTTTGACGAAATTGTCAACCAAGATGACGTCAAGT
GCTGTTAACAGAGTCAAAGAATTATTATCTGAAAGTCCTGAATCGATGGC
GGCCAGAGCTGCTGCTACTGCAACTGTTAGAGCTGTAAAACCTGGGAAAT
TCAGAGCAAGACGAGCTGCAATAACACTGGTGTTAAGATTCTGATTGATT
CGAAAGCCCAATTATCATTGCTCGGTACAGAAATGGACTTTATAGAAGGA
CTCATAGCTAGTGAATTTGTTTTTAATAATCCCAACATTAAAGGAACTTG
TGGATGTGGTGAAAGCTTTCATTTATGAATTGGTCTACGAATAGGAGTAA
AAGAAAGAGGCTGTAATGGACTTTCGTACACACTCGATTATGTGACAGAG
AAAAAGAAGTTTGACGAAATTGTCAACCAAGATGACGTCAAGTGCTGTTA
ACAGAGTCAAAGAATTATTATCTGAAAGTCCTGAATCGATGGCGGCCAGA
GCTGCTGCTACTGCAACTGTTAGAGCTGTAAAACCTGGGAAATTCAGAGC
AAGACGAGCTGCAATAACACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039301XLOC_039301Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062728-exon-scaffold_371-1575043694:251292..251759TCONS_00062728-exon-scaffold_371-1575043694:251292..251759Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1575043694:235926..235979TCONS_00062728-exon-scaffold_371-1575043694:235926..235979Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1575043694:235284..235389TCONS_00062728-exon-scaffold_371-1575043694:235284..235389Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1575043694:234102..234911TCONS_00062728-exon-scaffold_371-1575043694:234102..234911Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1510915933:251292..251759TCONS_00062728-exon-scaffold_371-1510915933:251292..251759Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1510915933:235926..235979TCONS_00062728-exon-scaffold_371-1510915933:235926..235979Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1510915933:235284..235389TCONS_00062728-exon-scaffold_371-1510915933:235284..235389Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1510915933:234102..234911TCONS_00062728-exon-scaffold_371-1510915933:234102..234911Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1491911889:251292..251759TCONS_00062728-exon-scaffold_371-1491911889:251292..251759Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1491911889:235926..235979TCONS_00062728-exon-scaffold_371-1491911889:235926..235979Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1491911889:235284..235389TCONS_00062728-exon-scaffold_371-1491911889:235284..235389Clytia hemisphaericaexon
TCONS_00062728-exon-scaffold_371-1491911889:234102..234911TCONS_00062728-exon-scaffold_371-1491911889:234102..234911Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062728-proteinTCONS_00062728-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:234102..251759 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.3616 16.824 6.27417 3.40106 20.4352 13.524 24.6608 25.1348 30.3993 22.4347 23.5162 29.483 24.7492 23.6546 19.3998 23.7826 22.8709 28.602 19.9461 21.4376 57.8211 54.7797 45.3563 41.044 29.5863 29.4122 30.3258 23.4681 30.2271 30.2102
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000361FeS_biogenesis
IPR016092FeS_cluster_insertion
IPR017870FeS_cluster_insertion_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0097428protein maturation by iron-sulfur cluster transfer
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0097428 protein maturation by iron-sulfur cluster transfer
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005198 structural molecule activity
Blast
BLAST of TCONS_00062728 vs. Swiss-Prot (Human)
Match: ISCA1 (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Homo sapiens GN=ISCA1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.024e-46
Identity = 71/113 (62.83%), Postives = 93/113 (82.30%), Query Frame = 1
Query:  436 KFRARRAAITLTSSAVNRVKELLSESPESIGLRIGVKERGCNGLSYTLDYVTEKKKFDEIVNQDGVKILIDSKAQLSLLGTEMDFIEGLIASEFVFNNPNIKGTCGCGESFHL 774
            K +  RAA+TLT SAVN++K+LL + PE +G+++GV+ RGCNGLSYTL+Y   K   DE V QDGV++ I+ KAQL+LLGTEMD++E  ++SEFVFNNPNIKGTCGCGESF++
Sbjct:   17 KLQPTRAALTLTPSAVNKIKQLLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSDEEVIQDGVRVFIEKKAQLTLLGTEMDYVEDKLSSEFVFNNPNIKGTCGCGESFNI 129          
The following BLAST results are available for this feature:
BLAST of TCONS_00062728 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ISCA11.024e-4662.83Iron-sulfur cluster assembly 1 homolog, mitochondr... [more]
back to top