TCONS_00063107 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063107
Unique NameTCONS_00063107
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2031

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063107 ID=TCONS_00063107|Name=TCONS_00063107|organism=Clytia hemisphaerica|type=transcript|length=2031bp
TTCACTCTTTGGCTTCATACaccaaagaaaaaagaagaagaacattGATA
CAGAACACCAAAGagTGAAACACAATGAAGCTCTTACTGGTTGCTTTAGC
CTTGGTGCATATAGCACTGTGTGTGGAAGAGGATAAACTTCCTACCGCTG
CAGACCTCCTAACAGAGGCAAAGCGAACATGTGCAGATTTTATTGCTACC
AGACCCAATGCTGTATGCTCGGAATATGGAGAGGAAGCAAATAAAAAGAC
GGTATTTTTCGAAACTTTCGCTGTAGTGGAGGATGACACTACCATGCCTG
AAGGAACAGGATTTGATATGGCGCAAGCAGAATGTAATGCAAACGGAGGT
TTCCTCGCTACTTTCAATAGTAATGAACAACTTGCGGAAATTACAACGAT
GGGCGGTATTCCGGATCTTGATGATGGAGACTCAGCCGTCATAATCATTG
GTATTAAAGATGTAAGCGGTCAAGGCACCTGGCAAAATTTCGACATGATC
AAGACTGCAGTACCATCAGATTTGGCTGTTGATGCCGTAATGGATCAGGA
GTGTTTAGCTATCAAAATCGCAGGGGTTACCGCAACCCTTGACACTGACG
GAATTGATACGACTCCAGATACTATCACTTATGAAACAATTGCTTGTCCT
CAAGATGCCGCAACAACTCATTACATGTGCCGCTTTAACTACATTTCTAA
TTCTATTATTTACATTGATGAAGCTAGACAATGGTCTGATGCTATGGTCA
AGTGCCAAGAAATTGGTGGTGATTTATTTAGTATGAAGAACGCTGAagaa
aaaatggctcttaactGTCTGTTAAATGAAAGAGTGAAACATACGGCATG
GATTGGTTTGAATGATCTGAATCATGAAGGTGAATTCACTTGGTCAGATT
ACAGCATCTCCAAATACACGCCATTCTGTACAAAGCCAGCACCAGATGCT
TTAGATAAAGATTGCGTCATGTTCCAAGCAAACACTGTTAAACCACACGA
TCACGCAAACAAAGCAGGATGTATTCAAGATGGCGACTGTTCCATGAATT
TACCATACGTTTGTAAAATCCGTGACCCAGAATCTGATGTTCATTCAGTC
TTATTCAAAGAATATTTGGTTCATCTTTTGAAAGACGTCGTCTCAGCTGA
AGGGGTATGTGGAAGAACTTGTGGTAACGGAATCGGAAGCATGTTTGGAC
ACAAAAGCTCAGGTCTTATTCCACGCAAGAAGATCAGAGTTGTCCGCAAA
GGTGGAAGAAAACGTCAAACCAAACAACGTCGATCCAAACACAAGATCTT
ACCAAGACATAAGAAGGCAAACAATGTGGTCAAAAGACCATCTAGTGGTA
GTGGTTCACTTGCTACATCACACAGCCTCTTAAGCCGACTTGGAATCCAC
ACCTAAATGACGTAACTAAAGACATTTATTACGTAATTCAAGACTACCTT
TTGGGCAACATAATATAGGATAATACGGTATGACCACATAAAGAAACATG
ATGATTAAATTTTAAGATTCTTGTTATTTATTTAACAAAAgattttagaa
attagatgTTATCTTGATTATAATTTCCAGAGAGATTTAAAGAAGCCTTT
GGTCCTAATTAAGAAAAACTACCCAAGCCTATAGTCTAGTGCTAAAATTA
TAAGTAACGAAAAGTTCCTTTCGAAATTGTAATCAATCTATCAATAAAAA
TCTCAATCAAATCGAAACTCATTGCTAAAAGCTTTGAActtaaattggta
aaattttgaaagaatcaAATGAAGTATTTTAAAGAAATGTTATATTTACT
CCAAGTTAATTTATGACTTATgattattattatatatattGTATTATTAT
ACTAtgattattattatattatgattattattattgttatattattaTCT
TTTATCATATAATTTTATTATAAGTAAGTTTTATTATGGTTTTAGGTGCA
GGACATTTTAATTTTCTACTGGGTTTTCCAACTTTTGTTACATTTATTGC
TTatgatttaaaaattgaaatttgaaaatcg
Run BLAST on NCBI

protein sequence of TCONS_00063107-protein

>TCONS_00063107-protein ID=TCONS_00063107-protein|Name=TCONS_00063107-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MKLLLVALALVHIALCVEEDKLPTAADLLTEAKRTCADFIATRPNAVCSE
YGEEANKKTVFFETFAVVEDDTTMPEGTGFDMAQAECNANGGFLATFNSN
EQLAEITTMGGIPDLDDGDSAVIIIGIKDVSGQGTWQNFDMIKTAVPSDL
AVDAVMDQECLAIKIAGVTATLDTDGIDTTPDTITYETIACPQDAATTHY
MCRFNYISNSIIYIDEARQWSDAMVKCQEIGGDLFSMKNAEEKMALNCLL
NERVKHTAWIGLNDLNHEGEFTWSDYSISKYTPFCTKPAPDALDKDCVMF
QANTVKPHDHANKAGCIQDGDCSMNLPYVCKIRDPESDVHSVLFKEYLVH
LLKDVVSAEGVCGRTCGNGIGSMFGHKSSGLIPRKKIRVVRKGGRKRQTK
QRRSKHKILPRHKKANNVVKRPSSGSGSLATSHSLLSRLGIHT
Run BLAST on NCBI

transcript from alignment at scaffold_38:258193..262379-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063107 ID=TCONS_00063107|Name=TCONS_00063107|organism=Clytia hemisphaerica|type=transcript|length=4187bp|location=Sequence derived from alignment at scaffold_38:258193..262379- (Clytia hemisphaerica)
TTCACTCTTTGGCTTCATACACCAAAGAAAAAAGAAGAAGAACATTGATA
CAGAACACCAAAGGTAAGAAGAACTTTGAAGAATGTGGCATCACTTGTTG
CTTTTTCTTTCGTTTTAGAGTTTAGATATTGACCCAGCTGGCACACAACG
TTCTTTCAACGTCAATTTGATGTTCACAACGTCCATTTAACGTTAGATGA
ATGTTGAAACAACGTTGTGTGCCAGCTGGGGATATATTAGAGTGGTGTTA
TCTTTGTGATTATGAAATGTTAAAAACATTTTGGCTGGTCTGATAGGTCT
CTCTCGATTTCGCTTACATGGATGGCCCCCAACTGTCATACAAGGTTGTT
TCAATGTTTATCTAATGCTCTAAACGGCCTTCAATGTTGTATTTAGCTGG
GTTACCACAAACTTTATTGTTAAATTACCACATCCCTGACATTCACAATT
TTATTCTTTATTTTTTTTAGAGTGAAACACAATGAAGCTCTTACTGGTTG
CTTTAGCCTTGGTGCATATAGCACTGTGTGTGGAAGAGGATAAACTTCCT
ACCGCTGCAGACCTCCTAACAGAGGCAAAGCGAACATGTGCAGATTTTAT
TGCTACCAGACCCAATGCTGTATGCTCGGAATATGGAGGTAATACACTGA
TCTCTAACTATTTGACTGGATCGGGATTCCCATATAAAAGGAAGCGTGTC
CAATTTTAGAGCTGACTTATCCACCATCTTGGTCGCCAATAGTGATTTTC
GAATATTTTCAAACTCAAACGTTTGAGATTCTAAGGTAAATTCTAACATG
GCGGATAGTCAACTTCTAACTGGACACACTTCCACTAAAAATCTGTGAGC
AGTTAGCCTTTCTAAAAATCGAAAATCAATCCTTAGGAAAAACAAAATAA
ATAATAAAGTATCTATCGGCAGACACGTTCATCCTTCCCAGGACTCATTA
GTGCGACTCAGGTAAGCGAGCACAGACTGTGCTCAGAGCACTAAGTGTTG
AGCATCGCATATTCGCTTGTGGTGAACGGAGAAGCAGAGCTTGCTCCTCA
ACAGAGTCTATAGAGTGCTCAAAGAACTGAAGTTCTGAGCGAAATCAGCT
AACTAATAAAGTAAACAGATTTTTACATGTTTTCCGTAAAAATATTTCCA
AAATGCTTTAAATTCTTTAACATTTTTTCTTTTCCTTTCACAGAGGAAGC
AAATAAAAAGACGGTATTTTTCGAAACTTTCGCTGTAGTGGAGGATGACA
CTACCATGCCTGAAGGAACAGGATTTGATATGGCGCAAGCAGAATGTAAT
GCAAACGGAGGTTTCCTCGCTACTTTCAATAGTAATGAACAACTTGCGGA
AATTACAACGATGGGCGGTATTCCGGATCTTGAGTAAGTACCCAGTTTAT
GTATCGGAGGAAATCGAGGGCGACGGTAAGTGAAATCGATACAAAACAAA
AGTCGATAGTTGATGTACGGCTCTATATCGCCTTTGCTCGCCTAAACAGA
CGACGGTATTTTGGTGTTTTTACCGTCGTCGAGCAAAGTGGAAGGTGATT
TTGGAGACTTTGCTTTATACCGTCCCCCTCCATTTATATCGAATACACAA
ACTCGCTAGTAATCTTATGAAGCGCCCATAGCATAAAGGTAGAATACACA
GATCTGTAAAGCCCGAAAGGCTAGCGCAGTCCTTTTTTCGTACCTATAGA
CAATAAAAAAAGGTGTCAAAAAGGATTGAGTTTAGGGGGATAGTTAAATA
ATAAAGTGGCACGCACCTGACTGCGCAACTACGGGCGAAAAGGTGTATTT
CTATTTTGAAATTTTGTTCTAACATTACTTATGTTCTGTTTTGCTCAGTG
ATGGAGACTCAGCCGTCATAATCATTGGTATTAAAGATGTAAGCGGTCAA
GGCACCTGGCAAAATTTCGACATGATCAAGACTGCAGTACCATCAGATTT
GGCTGTTGATGCCGTAATGGATCAGGAGTGTTTAGCTATCAAAATCGCAG
GGGTTACCGCAACCCTTGACACTGACGGAATTGATACGACTCCAGATACT
ATCACTTATGAAACAATTGCTTGTCCTCAAGATGCCGCAACAACTCATTA
CATGTGCCGCTTTAACTACATTTCTAATTCTATTATTTACATTGATGAAG
CTAGACAATGGTCTGATGCTATGGTCAAGTGCCAAGAAATTGGTGGTGAT
TTATTTAGTATGAAGAACGCTGAAGAAAAAATGGCTCTTAACTGTCTGTT
AAATGAAAGGTAAACAAATCATATTGATAGAAACAACCCTATCTCACAGC
CCCAGTGGAACTTTTTCTATTTCTATTGAAATCTCAATGGAAGCGGGTTG
TGTCACAGGGGTGTATATAATATAATGTCATATCCTCACATTGATATATC
AGCCCTCGGGGGGGGGGGGGGTTGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGGGGGGGGGGGGGTTTGCAGTGGCCTTACCAACTGACGGTATGTGCGGC
GAAAAAATGGCTTTTAGAATCGCACCCTTACAGTGCAGAAAAAAAAATCG
CTGAAATTCATACCCTTACAGTGCACTTTTTCAAATTTTAAACTCTTTTA
GAGCAAAAAAATCAAAATTTTTGAGCAAAAATTTGCAATTTTTCCCAGAT
TTTTCCTAGATTTGCTGAAATTTCCATTTATCAAAAGTCCACCCTTACAG
TGCATTTCTGATATTTTGAAAACTATACCCTTAACCGCTGCACATACCCG
TTGGTCAATTTGCCTGACTGCCCCTCCCCCGGGTATCAGCCTCAGATTTC
AGAAATGGCTAGTTGATAAAGTAAGCATAATATTAAAAATATCATAAGAA
CAGAGCAGTCTCGGTTATAATTTACTGGTTCTTATAAAAAAAGAAAAAGA
AAAGCATGTATGTACTTGGTATTTTTCTTTTCTGACAGAGTGAAACATAC
GGCATGGATTGGTTTGAATGATCTGAATCATGAAGGTGAATTCACTTGGT
CAGATTACAGCATCTCCAAATACACGCCATTCTGTACAAAGCCAGCACCA
GATGCTTTAGATAAAGATTGCGTCATGTTCCAAGCAAACACTGTTAAACC
ACACGATCACGCAAACAAAGCAGGATGTATTCAAGATGGCGACTGTTCCA
TGAATTTACCATACGTTTGTAAAATCCGTGACCCAGAATCTGATGTTCAT
TCAGTCTTATTCAAAGAATATTTGGTTCATCTTTTGAAAGACGTCGTCTC
AGCTGAAGGGGTATGTGGAAGAACTTGTGGTAACGGAATCGGAAGCATGT
TTGGACACAAAAGCTCAGGTCTTATTCCACGCAAGAAGATCAGAGTTGTC
CGCAAAGGTGGAAGAAAACGTCAAACCAAACAACGTCGATCCAAACACAA
GATCTTACCAAGACATAAGAAGGCAAACAATGTGGTCAAAAGACCATCTA
GTGGTAGTGGTTCACTTGCTACATCACACAGCCTCTTAAGCCGACTTGGA
ATCCACACCTAAATGACGTAACTAAAGACATTTATTACGTAATTCAAGAC
TACCTTTTGGGCAACATAATATAGGATAATACGGTATGACCACATAAAGA
AACATGATGATTAAATTTTAAGATTCTTGTTATTTATTTAACAAAAGATT
TTAGAAATTAGATGTTATCTTGATTATAATTTCCAGAGAGATTTAAAGAA
GCCTTTGGTCCTAATTAAGAAAAACTACCCAAGCCTATAGTCTAGTGCTA
AAATTATAAGTAACGAAAAGTTCCTTTCGAAATTGTAATCAATCTATCAA
TAAAAATCTCAATCAAATCGAAACTCATTGCTAAAAGCTTTGAACTTAAA
TTGGTAAAATTTTGAAAGAATCAAATGAAGTATTTTAAAGAAATGTTATA
TTTACTCCAAGTTAATTTATGACTTATGATTATTATTATATATATTGTAT
TATTATACTATGATTATTATTATATTATGATTATTATTATTGTTATATTA
TTATCTTTTATCATATAATTTTATTATAAGTAAGTTTTATTATGGTTTTA
GGTGCAGGACATTTTAATTTTCTACTGGGTTTTCCAACTTTTGTTACATT
TATTGCTTATGATTTAAAAATTGAAATTTGAAAATCG

Coding sequence (CDS) from alignment at scaffold_38:258193..262379-

>TCONS_00063107 ID=TCONS_00063107|Name=TCONS_00063107|organism=Clytia hemisphaerica|type=CDS|length=5328bp|location=Sequence derived from alignment at scaffold_38:258193..262379- (Clytia hemisphaerica)
AGTGAAACATACGGCATGGATTGGTTTGAATGATCTGAATCATGAAGGTG
AATTCACTTGGTCAGATTACAGCATCTCCAAATACACGCCATTCTGTACA
AAGCCAGCACCAGATGCTTTAGATAAAGATTGCGTCATGTTCCAAGCAAA
CACTGTTAAACCACACGATCACGCAAACAAAGCAGGATGTATTCAAGATG
GCGACTGTTCCATGAATTTACCATACGTTTGTAAAATCCGTGACCCAGAA
TCTGATGTTCATTCAGTCTTATTCAAAGAATATTTGGTTCATCTTTTGAA
AGACGTCGTCTCAGCTGAAGGGGTATGTGGAAGAACTTGTGGTAACGGAA
TCGGAAGCATGTTTGGACACAAAAGCTCAGGTCTTATTCCACGCAAGAAG
ATCAGAGTTGTCCGCAAAGGTGGAAGAAAACGTCAAACCAAACAACGTCG
ATCCAAACACAAGATCTTACCAAGACATAAGAAGGCAAACAATGTGGTCA
AAAGACCATCTAGTGGTAGTGGTTCACTTGCTACATCACACAGCCTCTTA
AGCCGACTTGGAATCCACACCTAATGATGGAGACTCAGCCGTCATAATCA
TTGGTATTAAAGATGTAAGCGGTCAAGGCACCTGGCAAAATTTCGACATG
ATCAAGACTGCAGTACCATCAGATTTGGCTGTTGATGCCGTAATGGATCA
GGAGTGTTTAGCTATCAAAATCGCAGGGGTTACCGCAACCCTTGACACTG
ACGGAATTGATACGACTCCAGATACTATCACTTATGAAACAATTGCTTGT
CCTCAAGATGCCGCAACAACTCATTACATGTGCCGCTTTAACTACATTTC
TAATTCTATTATTTACATTGATGAAGCTAGACAATGGTCTGATGCTATGG
TCAAGTGCCAAGAAATTGGTGGTGATTTATTTAGTATGAAGAACGCTGAA
GAAAAAATGGCTCTTAACTGTCTGTTAAATGAAAGAGGAAGCAAATAAAA
AGACGGTATTTTTCGAAACTTTCGCTGTAGTGGAGGATGACACTACCATG
CCTGAAGGAACAGGATTTGATATGGCGCAAGCAGAATGTAATGCAAACGG
AGGTTTCCTCGCTACTTTCAATAGTAATGAACAACTTGCGGAAATTACAA
CGATGGGCGGTATTCCGGATCTTGAATGAAGCTCTTACTGGTTGCTTTAG
CCTTGGTGCATATAGCACTGTGTGTGGAAGAGGATAAACTTCCTACCGCT
GCAGACCTCCTAACAGAGGCAAAGCGAACATGTGCAGATTTTATTGCTAC
CAGACCCAATGCTGTATGCTCGGAATATGGAGAGTGAAACATACGGCATG
GATTGGTTTGAATGATCTGAATCATGAAGGTGAATTCACTTGGTCAGATT
ACAGCATCTCCAAATACACGCCATTCTGTACAAAGCCAGCACCAGATGCT
TTAGATAAAGATTGCGTCATGTTCCAAGCAAACACTGTTAAACCACACGA
TCACGCAAACAAAGCAGGATGTATTCAAGATGGCGACTGTTCCATGAATT
TACCATACGTTTGTAAAATCCGTGACCCAGAATCTGATGTTCATTCAGTC
TTATTCAAAGAATATTTGGTTCATCTTTTGAAAGACGTCGTCTCAGCTGA
AGGGGTATGTGGAAGAACTTGTGGTAACGGAATCGGAAGCATGTTTGGAC
ACAAAAGCTCAGGTCTTATTCCACGCAAGAAGATCAGAGTTGTCCGCAAA
GGTGGAAGAAAACGTCAAACCAAACAACGTCGATCCAAACACAAGATCTT
ACCAAGACATAAGAAGGCAAACAATGTGGTCAAAAGACCATCTAGTGGTA
GTGGTTCACTTGCTACATCACACAGCCTCTTAAGCCGACTTGGAATCCAC
ACCTAATGATGGAGACTCAGCCGTCATAATCATTGGTATTAAAGATGTAA
GCGGTCAAGGCACCTGGCAAAATTTCGACATGATCAAGACTGCAGTACCA
TCAGATTTGGCTGTTGATGCCGTAATGGATCAGGAGTGTTTAGCTATCAA
AATCGCAGGGGTTACCGCAACCCTTGACACTGACGGAATTGATACGACTC
CAGATACTATCACTTATGAAACAATTGCTTGTCCTCAAGATGCCGCAACA
ACTCATTACATGTGCCGCTTTAACTACATTTCTAATTCTATTATTTACAT
TGATGAAGCTAGACAATGGTCTGATGCTATGGTCAAGTGCCAAGAAATTG
GTGGTGATTTATTTAGTATGAAGAACGCTGAAGAAAAAATGGCTCTTAAC
TGTCTGTTAAATGAAAGAGGAAGCAAATAAAAAGACGGTATTTTTCGAAA
CTTTCGCTGTAGTGGAGGATGACACTACCATGCCTGAAGGAACAGGATTT
GATATGGCGCAAGCAGAATGTAATGCAAACGGAGGTTTCCTCGCTACTTT
CAATAGTAATGAACAACTTGCGGAAATTACAACGATGGGCGGTATTCCGG
ATCTTGAATGAAGCTCTTACTGGTTGCTTTAGCCTTGGTGCATATAGCAC
TGTGTGTGGAAGAGGATAAACTTCCTACCGCTGCAGACCTCCTAACAGAG
GCAAAGCGAACATGTGCAGATTTTATTGCTACCAGACCCAATGCTGTATG
CTCGGAATATGGAGAGTGAAACATACGGCATGGATTGGTTTGAATGATCT
GAATCATGAAGGTGAATTCACTTGGTCAGATTACAGCATCTCCAAATACA
CGCCATTCTGTACAAAGCCAGCACCAGATGCTTTAGATAAAGATTGCGTC
ATGTTCCAAGCAAACACTGTTAAACCACACGATCACGCAAACAAAGCAGG
ATGTATTCAAGATGGCGACTGTTCCATGAATTTACCATACGTTTGTAAAA
TCCGTGACCCAGAATCTGATGTTCATTCAGTCTTATTCAAAGAATATTTG
GTTCATCTTTTGAAAGACGTCGTCTCAGCTGAAGGGGTATGTGGAAGAAC
TTGTGGTAACGGAATCGGAAGCATGTTTGGACACAAAAGCTCAGGTCTTA
TTCCACGCAAGAAGATCAGAGTTGTCCGCAAAGGTGGAAGAAAACGTCAA
ACCAAACAACGTCGATCCAAACACAAGATCTTACCAAGACATAAGAAGGC
AAACAATGTGGTCAAAAGACCATCTAGTGGTAGTGGTTCACTTGCTACAT
CACACAGCCTCTTAAGCCGACTTGGAATCCACACCTAATGATGGAGACTC
AGCCGTCATAATCATTGGTATTAAAGATGTAAGCGGTCAAGGCACCTGGC
AAAATTTCGACATGATCAAGACTGCAGTACCATCAGATTTGGCTGTTGAT
GCCGTAATGGATCAGGAGTGTTTAGCTATCAAAATCGCAGGGGTTACCGC
AACCCTTGACACTGACGGAATTGATACGACTCCAGATACTATCACTTATG
AAACAATTGCTTGTCCTCAAGATGCCGCAACAACTCATTACATGTGCCGC
TTTAACTACATTTCTAATTCTATTATTTACATTGATGAAGCTAGACAATG
GTCTGATGCTATGGTCAAGTGCCAAGAAATTGGTGGTGATTTATTTAGTA
TGAAGAACGCTGAAGAAAAAATGGCTCTTAACTGTCTGTTAAATGAAAGA
GGAAGCAAATAAAAAGACGGTATTTTTCGAAACTTTCGCTGTAGTGGAGG
ATGACACTACCATGCCTGAAGGAACAGGATTTGATATGGCGCAAGCAGAA
TGTAATGCAAACGGAGGTTTCCTCGCTACTTTCAATAGTAATGAACAACT
TGCGGAAATTACAACGATGGGCGGTATTCCGGATCTTGAATGAAGCTCTT
ACTGGTTGCTTTAGCCTTGGTGCATATAGCACTGTGTGTGGAAGAGGATA
AACTTCCTACCGCTGCAGACCTCCTAACAGAGGCAAAGCGAACATGTGCA
GATTTTATTGCTACCAGACCCAATGCTGTATGCTCGGAATATGGAGAGTG
AAACATACGGCATGGATTGGTTTGAATGATCTGAATCATGAAGGTGAATT
CACTTGGTCAGATTACAGCATCTCCAAATACACGCCATTCTGTACAAAGC
CAGCACCAGATGCTTTAGATAAAGATTGCGTCATGTTCCAAGCAAACACT
GTTAAACCACACGATCACGCAAACAAAGCAGGATGTATTCAAGATGGCGA
CTGTTCCATGAATTTACCATACGTTTGTAAAATCCGTGACCCAGAATCTG
ATGTTCATTCAGTCTTATTCAAAGAATATTTGGTTCATCTTTTGAAAGAC
GTCGTCTCAGCTGAAGGGGTATGTGGAAGAACTTGTGGTAACGGAATCGG
AAGCATGTTTGGACACAAAAGCTCAGGTCTTATTCCACGCAAGAAGATCA
GAGTTGTCCGCAAAGGTGGAAGAAAACGTCAAACCAAACAACGTCGATCC
AAACACAAGATCTTACCAAGACATAAGAAGGCAAACAATGTGGTCAAAAG
ACCATCTAGTGGTAGTGGTTCACTTGCTACATCACACAGCCTCTTAAGCC
GACTTGGAATCCACACCTAATGATGGAGACTCAGCCGTCATAATCATTGG
TATTAAAGATGTAAGCGGTCAAGGCACCTGGCAAAATTTCGACATGATCA
AGACTGCAGTACCATCAGATTTGGCTGTTGATGCCGTAATGGATCAGGAG
TGTTTAGCTATCAAAATCGCAGGGGTTACCGCAACCCTTGACACTGACGG
AATTGATACGACTCCAGATACTATCACTTATGAAACAATTGCTTGTCCTC
AAGATGCCGCAACAACTCATTACATGTGCCGCTTTAACTACATTTCTAAT
TCTATTATTTACATTGATGAAGCTAGACAATGGTCTGATGCTATGGTCAA
GTGCCAAGAAATTGGTGGTGATTTATTTAGTATGAAGAACGCTGAAGAAA
AAATGGCTCTTAACTGTCTGTTAAATGAAAGAGGAAGCAAATAAAAAGAC
GGTATTTTTCGAAACTTTCGCTGTAGTGGAGGATGACACTACCATGCCTG
AAGGAACAGGATTTGATATGGCGCAAGCAGAATGTAATGCAAACGGAGGT
TTCCTCGCTACTTTCAATAGTAATGAACAACTTGCGGAAATTACAACGAT
GGGCGGTATTCCGGATCTTGAATGAAGCTCTTACTGGTTGCTTTAGCCTT
GGTGCATATAGCACTGTGTGTGGAAGAGGATAAACTTCCTACCGCTGCAG
ACCTCCTAACAGAGGCAAAGCGAACATGTGCAGATTTTATTGCTACCAGA
CCCAATGCTGTATGCTCGGAATATGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039527XLOC_039527Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063107-exon-scaffold_38-1575043694:262317..262379TCONS_00063107-exon-scaffold_38-1575043694:262317..262379Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1575043694:261742..261909TCONS_00063107-exon-scaffold_38-1575043694:261742..261909Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1575043694:260997..261186TCONS_00063107-exon-scaffold_38-1575043694:260997..261186Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1575043694:260121..260531TCONS_00063107-exon-scaffold_38-1575043694:260121..260531Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1575043694:258193..259391TCONS_00063107-exon-scaffold_38-1575043694:258193..259391Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1510915933:262317..262379TCONS_00063107-exon-scaffold_38-1510915933:262317..262379Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1510915933:261742..261909TCONS_00063107-exon-scaffold_38-1510915933:261742..261909Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1510915933:260997..261186TCONS_00063107-exon-scaffold_38-1510915933:260997..261186Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1510915933:260121..260531TCONS_00063107-exon-scaffold_38-1510915933:260121..260531Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1510915933:258193..259391TCONS_00063107-exon-scaffold_38-1510915933:258193..259391Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1491911889:262317..262379TCONS_00063107-exon-scaffold_38-1491911889:262317..262379Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1491911889:261742..261909TCONS_00063107-exon-scaffold_38-1491911889:261742..261909Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1491911889:260997..261186TCONS_00063107-exon-scaffold_38-1491911889:260997..261186Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1491911889:260121..260531TCONS_00063107-exon-scaffold_38-1491911889:260121..260531Clytia hemisphaericaexon
TCONS_00063107-exon-scaffold_38-1491911889:258193..259391TCONS_00063107-exon-scaffold_38-1491911889:258193..259391Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063107-proteinTCONS_00063107-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:258193..262379 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0189881	0	0	0.183812	0.269752	0	0.117183	0.147677	0.345519	0.0591828	0.0129682	5.64626	58.8521	14.1084	10.3112	0.0584698	0.0599297	0.952155	0.866402	0.188265	0.247939	0.11163	0.162381	0.459934	0.41048	0	0	0.0216123	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063107 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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