TCONS_00063267 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063267
Unique NameTCONS_00063267
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3013

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063267 ID=TCONS_00063267|Name=TCONS_00063267|organism=Clytia hemisphaerica|type=transcript|length=3013bp
CGAGTTTCAAGCAAAGCCTTTCAAGTAGGATCATGAAAAAACTAAAACGA
AGGAGAAAAACCACCTCGAACTCAGTCCTTTAAAGCTAAGCAAGACTTTT
CTCCACCATCCAAACTCAAATTTGCTAAATCATTGTAAATCCAAGATGGC
GGCGGTGGACTACTATCAAAACACCTCTGTAGATTCTCTATCAAGTTTAA
GTAACATAGGGAGACACagtttagaaaaattttcacgTTCCATCGAAGTT
CCTGGTGCTGACTTTGCCCTACCAAACACAAATGATCCTGTTGGATTTTT
GAACGAATGTACGAATGgcaaaaacaaaattgatatCAAATTCAACCATG
GAACCACAACGCTAGCCTTTAAATTTCAACATGGTGTCATTGTAGCTGTT
GATTCTCGTGCGTCTGCTGGTTCCTATATCGCATCTGGAACCGTGAAGAA
AGTTATCGAAATCAACCCATATCTTCTTGGTACAATGGCTGGCGGTGCTG
CTGATTGTTCTTTTTGGGAGCGTCTCTTAGCTAAAGAATGCAGATTATAT
CAATTAAGAAATAAGGAACGTATATCTGTGGCGgcagcatccaaaatttt
agcAAATATGGTCTACCAATACAAAGGAATGGGTCTTAGTATGGGTACCA
TGATTTGTGGTTGGgataaaaagGGACCTGGTCTATATTATGTTGATGAC
GAAGGAAGCAGATACAAGAACGATTTATTTTCTGTCGGCTCTGGCTCCAC
ATACGCGTACGGTGTTTTAGACGCCAACCACCGATACGATTTATCCGTTG
AAGAGGCTTATGACTTGGGACAACGAGCTATCTACCATGCTACACATCGA
GACGCTGCGTCCGGTGGTGTGGTCAATTTATACCACATGCAAGAAACTGG
ATGGATTAAAGTTTCACAAACAGACGTTACTGAGCTACATTATCGATATA
AAGAGGAAGCTTAAAGATTTCATCTCCTACCAACCCACTAAAACCACTGT
TCATCAAAATCTCTTCTCACCAATTGTTGAGGTGAGTGAGAGATTCTTTA
ACCATCTGAGAATTTCGGGATCCGAATTTTCTCAATTCAAACCAGTTCAA
ACACCGACACCTTTGAAAGACgttgtatcttttttttttctaaataattt
tcAGAAATATTTAAACTGTAAACTTATAAAGATTTTAAgctgttgatttt
ttttttcgtttcacTTGAAAAGGAGTTATTTTTCGGATACTTTATACCAT
AAATACTATGCCTTTCATCTTGTTTGTTACTATTTGGGTAGAGTTAAGTA
TTATTGTCATTTATGAGAAATGAGTTATACCCCGTTGATAACtgacccat
ttcgatgcatcggagggcatatTTATCTATAtcgaaaatatttctttgct
aTCATATACTCAAACTGCACCATACTCAAACTGCACCATACTATTggaat
cgaaaaaaaaacatacccaAGGAAAGAATAAATGGTATAGAATTTGATGG
TCATTGATTATCTATATTTAcctaaagtaaaagaaaatcattttacAACT
ATTTCTACGGTGCGAAAATATCATCTCCTCGCAAGGGCGGCGTCATTGGG
TCGTGTTCCCTTACTTTTCTGTACCCTTCTTTTTCCTTCCGTCGTCTTTG
TCCGTCATCCTTCGTTTGCCCACCCCTTCCAGGGGGTAGAGCGGGTGTTT
CTTCGCCTCCTCTCCCTGGTAAAGGTGGTGCTCGGTGACCTTGCTTCCCT
CTTGCGGGTATTGAGGGTTCTTTGATCTCCGAAGTTTCTCTTCCGGGAAT
TCCTGGTGGCGATCGGTGGCTGTGCTTTCCTCTTCCGTGTATTGACGGTT
GCTCTTGGATCGCGGACGTCTCTCTTCCGGGAATTCCTGGCGGTGCTCGG
TTGCCTTGTTTTCCTCTCCCCGGTTTTGACGGTTGCTCGTTGATCACCGA
AGTCTCTCTTCCGGGAATCCCTGGCGGTGCTCGGCTGCCGTGCTTTCCTC
TTCCGGGTATTGAAGGTTGCTCTTGGATTTCCGAAATCTCTCTTCCAGGA
ATTCCTGGTGGGGCTCGGGAACCCTTCTTTTCCCTTCCATCTACCTCTGG
CGAGTCTTCAAAGTCCGAAGTCTCCTTTTTCATCTTATGTCGtgactttt
ttctatttttctcttCGTGTGAGCTATCCTTCTTCGATTTCTGGTTGGAG
TCATCTTCCTCATTCGTTTCTTGGCTGTCTTCTTTACGTCGTCTTTTGGA
ACGTCCACCGTTCTTTTTAGTATTGTTATTGCTTTCATCGTCTTTTCTCG
TTCCTCtaacacctttttctatttCGTCTTCCTCTTGATCACCACTCAGT
TTCCTGAAATGTCAAAATGATTTATATTCAAGACCAACTACCTTGGAACC
AGATGTAGACAATAATGCTATATGTTATCTTGCGTTAAGGGGACGCCTCA
ATAGTCTGTCTGTCTGTTTCAATAATAATAATCGGGGACaaagttttttt
atctttgCAGCAGATCGGTCAAATTAGGATTTGATTAGGAAAAAATGAAG
TGCAAAGTTTACATCCGGAAAAGACAGCAGTGGTAGATTTTGATGTGAAG
AACTCCTTTATCTACTGCAATCCCCTAATTTATCCACTCATATTCactgt
tttttaaaaatgttcgaCAGTGTAGAAACTTGGAATTCGAGGCTCCTTTC
GGCTTGAATGGATCTGGGAGGGATCACCTCGAAATATTCCCAATTATGAT
TACTCActtttcgaaaacaaatttCCATAGAGCAAAGATGACGGCACATG
AAATACCGATTGAACATATTGCGCCGATTGCTTTTGCGGAACCAGATTCA
AGAGGATCCTTTGGTTTAGGTGTTGTcggtgttgttgttgttgtcggtGT
TGTCGGTGTtgtcgttgtcgttgttgtcGTAGTGGTagtggtggtcgttg
ttgtggttGTGGTTGTTGTTGGAGCTAAATAGGAAATAAGATTAATATAG
CCGAAGACTAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_385:23514..37071-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063267 ID=TCONS_00063267|Name=TCONS_00063267|organism=Clytia hemisphaerica|type=transcript|length=13558bp|location=Sequence derived from alignment at scaffold_385:23514..37071- (Clytia hemisphaerica)
CGAGTTTCAAGCAAAGCCTTTCAAGTAGGATCATGAAAAAACTAAAACGA AGGAGAAAAACCACCTCGAACTCAGTCCTTTAAAGCTAAGCAAGACTTTT CTCCACCATCCAAACTCAAATTTGCTAAATCATTGTAAATCCAAGATGGC GGCGGTGGACTACTATCAAAACACCTCTGTAGATTCTCTATCAAGTTTAA GTAACATAGGGAGACACAGTTTAGAAAAATTTTCACGTTCCATCGAAGTT CCTGGTGCTGACTTTGCCCTACCAAACACAAATGATGTAAGTTTCACTAA CCTTTACCATAGGTAGGGTGGACATGACAAAATTTCCCCCTCAATTTTTG AAAACCAAACTTAAGTTTATTTGAAAGTCATTATACCTTTGTGAGAAAAA TGAGTGGTCAGTTATTTAAACTGGTTAAGTATTTTAAAAGTTATTTCATT TTCAAAACAAAAATCACCTTTCCAAAGAATCGTCTGCTTACCCCGGGGCC GCCAGCAAGAAATAATTTTTGGAAAGCACCAAAAAATGATGGATGATAAA ATCTACTAGCCTTCCGTGCTGGCGCAGTTTTGATATCAGCCTGATGACTG TTAAACTTTGGCTTATTGCTAATGAGCTTGAAAAAATAGCTAAAAACATA CCGTCAACTGCTCTAACTGGGGACGATTGTTCGAATCATAAAAAAATCTG GTTGATATCTGGCCTGTATTTTCACGTACTGTTATATCTCATTGACAACA AATTTGTTTTGATACTCAACCAAGTTTATCTAATCATACTTCTTCGTTCT TCTTAAGCTCGTGGTCCACTTAGCTCTTTTCCAGGCGTAATTAATTACGA CCCTGGACACCTCCGTACATTGTGCGGTGGAGTCCAGTGGGCGTCCGTTG GGTGTACGGTGGTATTTTAGGTTAGACCGAAAACACTGTACAACACCACC GTACAGAATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNCCCCGGGCTGCCTTTTTTCGATGAAT CGCGTGTCATGTCAAAATATGGTTAAAAGATACGTCACCCGGGAGGGATA GAGTCAAACTTTGAAGAGAATTCTTGCCTTTAATTTTGATTTCATCGTGT TTAAGCCACCTTCCCAACATCTCAAAGGACTTTAAATACGTTCAGCAAAC AGCTAAACCGGCGTGCGACGCCGGGTACCGGCTAGTATTTATTAATCAGA CAGGAAACTAAGATTTTTTCCTCAGTAAAGTCAAAACAAACTGCGAGCAA GCTACCTGACCTTGAAACAACATGTTTAAAATGCATTTTTGCACTGAAAT ATTTGAAACAAAAGCCTATGTTTATTGAAGGAGTGCAGACTTTATTCAAC TAAGAGGGCTCAAATGTTTTAAGAGCAAGGTTTGGTGGTTTGCACCCTCA TCTGCGATTTTTTACTTGAGCATAAGCTTTATTACAATACAATGCCTTTC CCTGTTAATCTGCTATTCTTTTGTTTCGTTTAAGCAAAAGTGAAAAGAAA TTATGAACGCTGACAACTGCTGACAACCATTTTCTAACTTTTCATTACAA AATATTCTAAATAATCTGTCTTGCCATTCTCTTTCATCTGCTATCATCGT CTATTTTTTATCTATTCAACTTTTGGAAGATCTTAAGATGAGTTTTTTGC AGTGCCGTAGGAAGCAATTTCATATTGGGGGTTAGTGACACTGTGAGGAC CAAACCATCAACCATGGTTTGGCCCAAGGGGAAAATTTTTAAAATTATTT TGAGCTCTAGATTGCTTGAAAATGCACTCAGAACAAAAGGCTTTTGAGAA CAAATTAAAAAAGAAAAACTTTGCATTTTGCAAAATAACCATTTTTGAAA AAATTAGGGCTCAATAGTTGAGGCTCTTAACTATTATGACTANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNGAAAATATAAAATCGTTCTGTAAATTACA CAATACTATTATGCATTATGCAATATGCATTATGTTTTATGCATTTTGTA CCTGCCGATTCAGGAAAGTTATTTACATCGATGCATTCATTAATTCGATT AGAAAGATCATTGATAATGTGGGGTGCTATAATTTTTAGGATCAGTGTTG GAATACTGTTTGGTCCAACAGATTTGGAATCTGATAATTTGTTAATGACA TTGAGAACTTTTTCATGTGAAGGATCTGCAAGCTCAAAAGAAACTGGATT TGGGTTTGTCAAGAATTCATCAAAGTTTTTTTCTGTAGGAATTATTTTAG ATTTGGTTTTATCTGCTATACCTGCATAAAAATTATTAAAGATCTCAGCG AGTTTATCGTCACCTTCATGTTGTTTGTTATCATGAATTAAAACTTTAGG AAGACTTTGTTTAGATTTAGTACCAATAATTTCCCTAATGCCTTGCCAGG TTTTTTGGAGATTTGTTTTATGTTGACAGAAACCTCGCATGGTTCTAAGA TTATAGAGCTTGGTACATACAGGTAGATTAGTCTGACACAGAATGTTATA AACAGCCTGTGTGTGATGACAGACTTTCTGAACTTTGGAAACCCAGGCAA ACAACACACATAAACAAACTTACCCATAAAAACTACTCACAAGCTCCTAA AGACTTTCAAAACTACTAAAAGCCAGTTTAAAACATCAGGCACATGTATT TAGCACGTGCGTTTGCGTAGGCCAGACGTAATCGAACTTTGTCGAACTTA TTCGAACAACAAAAGTTCGATTAAATTCTTTAATCGAACTTTTCAAAAGT TGCTAAAATTGTGAGTATTCGATTAAGTTCGACAAAACATATTACGTTCG ACAAAGTTTGACAACGAGAAATGTTCGACTAAAAACTCCGTTCGATAAAG TTCGACAACAAGAAAGGTTTGACAAATTCGACAAATAACAAGAGTTCGAC AACAAAAAATGACCTCCTTTGGGTACTACCGTGGACGGCCCCTGGGGGTC CCGGCCGAGGTCCGGGGGGGTCCAATCGGTGCCCACTGGTCAGGGGGATG TGAGTGAGGGTACACGCCTGCACCAGCGGGGGTGCTTCATAGTTCCTCAA AGTGTCGTCAAAGGCCGGCANAGGGATGTGAGGGTACACGCCTGCACCAG CGGGGGTGCTTCAATGTTCCTCAAAGTGTCGTCAAAGGCCGGCAAAAAGT GCAATCGAATTACGCGCAAGTGGAGCGGCCTTCAGTTGCTCGGATTTTCT CTAATTTTTGTTCAATTAAACTTGACAAAGTTGGATTAAGTTCGATTAGT TCGATTAAGTTCGAATAATGTAATTGAACTAATCGAACTGTTGAGGTCTC TTTAAGAAAAGTCCGATTAAGTTCGATTTCAGTAATCGAACTTAATCGAA CTTTGTATTTTGAGAAATTTGTGAGTATTCGATTAAAGTTCGACAACTGA ACTTAGTGGAACATTAATCGGCCAACAAAGTTCAATTAAGTTCGACAAAG TTCGATTAAAAATACCGGAATTTGTTGAACTGAAATTTTTAGTAGGGGTG GCCAACATGGTTCCCTTGCTCATATCAGGGGGGGGGGGGGGGGGGGGGAA NCGTTTGGTTTGGGAACGCGAAAACGAACGAGAACCATCCATGTCTAAAC TTTTGAATATATCTCCAGAACTAACAGATTTTTTTAAATTCTATAAAAAG GTCCAAGTTCCTGAATAGTTTTACTACTCTTGGCGAACCAGACTGACCTC TGTAGCCTCGAGGGAGGTAGGTTTTTAGTCCAGGGAAAGGGCTCATTAGA TTGCGTCCCTTGGTTATTGGTTATGTTTAGTTATGAAAACAGCGAAAGGG AAGAGATATTGAAGAATTCAAAAGCAACAAGAATTGAAATAGTTGAACAG ATTGAATGNGCGTTTGGTTTGGGAACGCGAAAACGAACGAGAACCATCCA TGTCTAAACTTTTGAATATATCTCCAGAACTAACAGATTTTTTTAAATTC TTTAAAAAGGTCCAAGTTCCTGAATAGTTTTACTACTCTTGGCGAACCAG ACTGACCTCTGTAGCCTCAAGGGAGGTAGGTTTTTAGTCCAGGGAAAGGG CTCATTAGATTGCGTCCCTTAGGTTATGTTTAGTTATGAAAACAGCAAAA GGGAAGAGATATTGAAGAATTCAAAAGCAACAAGTATTGAAATAGTTGAA CAGATTGAATGATTCATAGACTAAACGAAAGACTTATCAATTGTAAAACA TACAGAATATCACCAAAGAATCAGTTAAATACCAGAAAAAACAACCCGAA GGTCAGCATCCTTCTTAGTTTTTAAATAAAAAACAACAAGAAAGTGTTCA TAATTTGGAATATTTCGATGACTTCTATCTCATCATTGTCTACCATAAAC TATAAATACATTTCAAAAATCTACTTTTATTCTAAAAATCTGTACAGCAG TAAAATGATAATTAAAAACGTTAATGAGTTATAAAATGTACAAGGGAAAT AAAATTGTAAGCTAAAAAATGACTAAATGAAAGGAACAAAAGATTGTCAA TAGCCAGGGGTCTATCCAAACAATTGAAGTTCTTTTGAAGCTTTCAACCC GTCATTAATCTTTGGTTTTAGTTTTTTAATGTAAAATGCTTCTAAAAAGG CCAATTGTGACCAATTATCATTCGAATCTAAGATTTTACAATTATTCAAA ACAGCGTTCAAAATGTGTTCTTTATGGTTAATCCCATGTGATTCTCCAAA CAATTGTGCGAGATTAATGTTTGGAACTAACAGATTTTTTGAAATTCTGT AAATAGGTCCAAGTTCCTGAATAGTTTTACTACTGTAACTTGGTAAGTAA ATGAGATAAGATAAGATAAAACCTTAAAATCAACCAGAATTTACAACCTT TCGTCTAAAGCAAAAGACATGCTTTTCTCGCCGCCATCTTGTTTTAGAAT GATAATTATTTTCGGTTCCAGTTCCCACGGTCTTTTTTCATCCAATCAGA TCGCGCAATTTCACTTTCGCTTTCTCTAGTCCAATAAGACTGCAGGATTT GAGTCATGTGACATTTCAATTGAAAGACCAGCGCAGAATAAAATAGAAAT ACAGGGGTCACACTACTGCAGGGATCGAATTAGCGTATCACATTTCGCAA TTCGCGATGCGTTTTTAGATTGAACCAAATCGATCTGCCATGTGTGTCCC ACTTGGTTAGGGTGTGTCATTGTTCAATCGAGTAAATAAGTTTTAACCAA TGTCTAAACTTTTCACTATATCTAAAGAATTAGTTAACCTTTTTAAGATC TGTGAACAACTCTTTACTCCCAAATAGTTCTAGAATAAAACCTGAAAAAA CCAAGATAATTGATAAAATATTCAATCCTTAAATAAAGATTGAAGATGAA AATTCACGAAGAACAAAAAACCTTAGCAAAGAAATTGCCTTACACATTTT TCCATTTAAAATAGAAAAACTTCTGGATATTTGAGTTCCCCAAATATCGT AGAATCTTTTAGTGCACATGGCAAAAGAAAGAGAGATGATTAAAACCTTT AAATCCNTTTTCCATTTAAAATAGAAAAACTTCTGGATATTTGAGTTCCC CAAATATCGTAGAATCTTTTAGTGCACATGGCAAAAGAAAGAGAGATGAT TAAAACCTTTAAATCCAGTTAAATCAACTGAATTCTTTCCATAGTCCATA AAAATTGAGAAAGGTGCATGTCTTGCTATTTTGTTTTTTGTATAAATTTG AAGTTGGAACTTCTTATCACATGACAAAAAAATTTCCAACATCCAATGAA ACTGAATGAAAATGCGCGATTTGTATCACGTAGCAGAAAAAAGTCCACAT GATAGCAAATTTCCTGTAGAATGGCCGTTCCATTATATTTATAGGATAAG AATACAAAGGGTTTTCAGGGTGTTCTACTATAAGCTGGGGCTTTGAGAGG CTAAGTTTTTAGGGCAATTTTTATGGTTTTTCTGAAGCACATATTATAGC TAGAAAGACCTAAGCTAGACTTAAAAAGATGTTGGTTAACCCAGGGGGTC AGTACTAAGATCTCAGACATTGTATGAGTACTAAAAGGGTTTTTGAGAAT ATTTTGCATACCACCACCCCATTTTAGAGAAGTGCTTTCTAAGTACCCAT CTACTAATATTTTTGGGGACATTTTGGCACAGACCACCAAATGTTGGTCT TCTCAGGACCACTTTTCTTAAAAGTGCTTTTAAAATTTTTATTTTAAAAA TTTGTGCTTTCTAACAATGCTGCTCTAGCAATTATTAAAGACATTTGACT GAATGTAAAGAATTTTCTGATGACATAAATGCTATTGTTTTCTTTAGCCT GTTGGATTTTTGAACGAATGTACGAATGGCAAAAACAAAATTGATATCAA ATTCAACCATGGAACCACAACGCTAGCCTTTAAATTTCAACATGGTGTCA TTGTAGCTGTTGATTCTCGTGCGTCTGCTGGTTCCTATATCGGTATGTTA CATTGAATTTCAACTACAGTCTTGACCCAGATTTAAGGTTTTTCGCCTTA TTTTTCTATGGAAACACTCACAACCCTGGTATTTAACCGTAGCAAAAAAC TACAGAGGCAAAAACATCAGACTTGCCTGGGCTGCTGACCTAGTTGGAAA ACCTTTTTAGGTTTTTTTCCTTTGACACTGTAGAAATTTGGTCTGGATTG GTATAGGATTTCTCTCAAAATATGAAATCCCATTTTCATTAATTTCGAAA ATAGATAACCAATGATAATTTTGACCTTCATGAAAAATTAAATAATCAAA ACAAATAAAATCTCATTTTTGTTTTCAGCATCTGGAACCGTGAAGAAAGT TATCGAAATCAACCCATATCTTCTTGGTACAATGGCTGGCGGTGCTGCTG ATTGTTCTTTTTGGGAGCGTCTCTTAGCTAAAGAATGCAGGTAAAAATTA TATGAATGTTCCAACTATTAATGTTAGTTTAAGTAGTAAAATCTAAATAA GTTATGGTCACGAAATTATATTGATATGGTGGCATAGACTTGAGTCGTTT ATAATGCGTGTAATACTAATAATACCAATACTAATAATAATAATAATAAT AATAATACGGGATTTAGTTTGTATAAACGACTGGAAGAATCCGGTGTTCC AGCCTTATAGATACAGGGGCTAGCTACTNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAAG AATTATTTTGAGCAGGAAAAATTTATAATTGCAATATTGACACTTTTCTT TTGTTTGGAGTTAGTGCACAAAGGTTTCTAGACGACTAAAATTGTTACAT TCATTACATTTTGCTTTATTTCTACTATGTATAAATTAGTCGTCTAGCTT GCTAGACTAATGGTGGCATTAAATTAACTTACGCTTACGGTTGCTTTATT CTTTGTTAAAAAAAACAATAAGACACTCAACAGAATTATGTTAGGCATGA CGGTCAACGGAAGTTGTTTTGGTAAAAAATAATAAAAATAGGAGATGAAA TTATACTGGGTAAAAGCATATCAGTTCGGGAAATTGCTATAGATTCACAA CGTTGCAAAATTCCGCAATGTTGCGTTTTTTCGCAACGCTTCCCTCAGCG TGGGCTGCAATTTTTCGCAACGTTTCCAATGGAAGTGTGCGACTATGAAC ACCAACTATGACGACCAATTTTCGCAAATAGAAGCAAAATTAGACAAAAT CTGGCATATTTGAACAAAGTAGCATTTCTTCCAAGAATGATTGTGAATAA TCGCTAGGTAGGAAATTAAAATGTTAGAGTGAAAAGTTTCCTCTTAGGTT GTTCTTCAAAATGCACATTATTTTGGCCAGGTCTGCGAAATTATGCACTA ATAAAGCTGCATGACAACGCAACGTTGCGGGTCTATGCAATTTCCTGAAT TGATATCTGCCATTGAGCTGTCATGGGTCCATGTGGAACCGGATGACTCA AATGCTACTCCACATGGACCCGTAGCTCAATGGTAGATATAATTGTAAAA CAAAGGGCATAATTGTATAAATGATTAATATCTTTGAAAAAGAAAGCTAA CAAAAAGTTAAAACAATTGACTTCAAGGCCAGGATTTTTATACGGGCAAT GGCATAAAAATCAAGGGGTGTTCTCTCAGGTTCGCTTTATGAATTGGAGA ATATTTTTTCATACGTCAGTATTTCATTTATTGCATTACCTAGCCCAACA CTATGCTTGATTTACGCTGATCACATCACTGCACTCTCTCTTTTCTTTCA GATTATATCAATTAAGAAATAAGGAACGTATATCTGTGGCGGCAGCATCC AAAATTTTAGCAAATATGGTCTACCAATACAAAGGAATGGGTCTTAGTAT GGTAAGAATATTCTGATATTCACCTATGGCTCATACTAACTGCCTGAAGA ACTGAGCCCAATACTTATTCACTATCTTATAGTCTGTTACTATTGTATTA AAATAAAGCATTTAAATCAATAAGGAACATTTAAGGAACAAATACAGCCA ATCCCCGTGCAAAGCAATGTTCAACCTCGTACCCTGTGTTATATCGGCTT TTTTTTATGCCTGATATCGCCAGATTTGATATTGTCTTGTGTCCATTAAG TAAAGTAAATAAAGTCTATAACAATACATAGGGATGAAGTTAGGCAATAC TAATAAAGCATTTTATGTTTTCTTTGCTTCTTAAAAGAATAACTAAATCA GATTTGGTCATTTCAGACACGATATCAAATTTCTTCTTTAAACTTCTATT TTTTCTTTCCTTTTACAGGGTACCATGATTTGTGGTTGGGATAAAAAGGT AAATTTTATTTATTNAATAACTAAATCACATTTGGTCATTTCAGACACGA TATCAAATTTCTTCTTTAAACTTCTATTTTTTCTTTCCTTTTACAGGGTA CCATGATTTGTGGTTGGGATAAAAAGGTAAATTTTATTTATTTCGGGTTG ATTTCGGTTCACAAACAACCGGCCAATACGACTTAAATTCATAAGTGTTT TGCCTCGCTTCATAGCGTCAGCCCTGCTAGTTGGGGTCCACTCAAGCTAG TTGGGGTCCCCTCAACTTCTTCACGAATCATTTTTATTTTTCTTAATCGT AGGGACCTGGTCTATATTATGTTGATGACGAAGGAAGCAGATACAAGAAC GATTTATTTTCTGTCGGCTCTGGCTCCACATACGCGTACGGTGTTTTAGA CGCCAACCACCGATACGATTTATCCGTTGAAGAGGCTTATGACTTGGGAC AACGAGCTATCTACCATGCTACACATCGAGACGCTGCGTCCGGTGGTGTG GTCAATTGTAAGCCATCTTCTGCTTTCCTTCAATAAATGCCTTTTTTTTA ACTCGAGGCTCAATTTTAGCCAATCGAACGGTTTAAACCTCATTTTTGGC TAACCAATTGCTGAGTTTAGACCCCTTTTAAGCCAACAAGTGAATAAAGT AAGCATATCCAGAAAAAACATTACAATAAACCCGAGACTCGTTAGAAAAA ATATAACAAAGAAAATTAAGTACAAGCAAGCCGCACTGAGCCGCAACCAA ATTTACCAGTTCTTGTAGCGGGTATATCTTTTAAAGATCTTACGTTTTTT TGGACACAATTTTTTTTTTCTTCGAAAAATGCACTATGCTCTTCCTCCAA AGACTCGCAATGCTTTTCCTTAAAAAATACACATGATGAACCCCCCCCCC AAAAAAAAAAAATGGTGCTGATTGTCACTACAGGGGCAATTTTCCTCCAG AACCAATTTCTTTTTCAAAAATTTCGATTTTTTACCATAGTATACCACAT GCAAGAAACTGGATGGATTAAAGTTTCACAAACAGACGTTACTGAGCTAC ATTATCGATATAAAGAGGAAGCTTAAAGATTTCATCTCCTACCAACCCAC TAAAACCACTGTTCATCAAAATCTCTTCTCACCAATTGTTGAGGTGAGTG AGAGATTCTTTAACCATCTGAGAATTTCGGGATCCGAATTTTCTCAATTC AAACCAGTTCAAACACCGACACCTTTGAAAGACGTTGTATCTTTTTTTTT TCTAAATAATTTTCAGAAATATTTAAACTGTAAACTTATAAAGATTTTAA GCTGTTGATTTTTTTTTTCGTTTCACTTGAAAAGGAGTTATTTTTCGGAT ACTTTATACCATAAATACTATGCCTTTCATCTTGTTTGTTACTATTTGGG TAGAGTTAAGTATTATTGTCATTTATGAGAAATGAGTTATACCCCGTTGA TAACTGTTGCGCTGTGATTCCTACTCCACCGTGGGTAGGACCCATTTCGA TGCATCGGAGGGCATATTTATCTATATCGAAAATATTTCTTTGCTATCAT ATACTCAAACTGCACCATACTCAAACTGCACCATACTATTGGAATCGAAA AAAAAACATACCCAAGGAAAGAATAAATGGTATAGAATTTGATGGTCATT GATTATCTATATTTACCTAAAGTAAAAGAAAATCATTTTACAACTATTTC TACGGTGCGAAAATATCATCTCCTCGCAAGGGCGGCGTCATTGGGTCGTG TTCCCTTACTTTTCTGTACCCTTCTTTTTCCTTCCGTCGTCTTTGTCCGT CATCCTTCGTTTGCCCACCCCTTCCAGGGGGTAGAGCGGGTGTTTCTTCG CCTCCTCTCCCTGGTAAAGGTGGTGCTCGGTGACCTTGCTTCCCTCTTGC GGGTATTGAGGGTTCTTTGATCTCCGAAGTTTCTCTTCCGGGAATTCCTG GTGGCGATCGGTGGCTGTGCTTTCCTCTTCCGTGTATTGACGGTTGCTCT TGGATCGCGGACGTCTCTCTTCCGGGAATTCCTGGCGGTGCTCGGTTGCC TTGTTTTCCTCTCCCCGGTTTTGACGGTTGCTCGTTGATCACCGAAGTCT CTCTTCCGGGAATCCCTGGCGGTGCTCGGCTGCCGTGCTTTCCTCTTCCG GGTATTGAAGGTTGCTCTTGGATTTCCGAAATCTCTCTTCCAGGAATTCC TGGTGGGGCTCGGGAACCCTTCTTTTCCCTTCCATCTACCTCTGGCGAGT CTTCAAAGTCCGAAGTCTCCTTTTTCATCTTATGTCGTGACTTTTTTCTA TTTTTCTCTTCGTGTGAGCTATCCTTCTTCGATTTCTGGTTGGAGTCATC TTCCTCATTCGTTTCTTGGCTGTCTTCTTTACGTCGTCTTTTGGAACGTC CACCGTTCTTTTTAGTATTGTTATTGCTTTCATCGTCTTTTCTCGTTCCT CTAACACCTTTTTCTATTTCGTCTTCCTCTTGATCACCACTCAGTTTCCT GAAATGTCAAAATGATTTATATTCAAGACCAACTACCTTGGAACCAGATG TAGACAATAATGCTATATGTTATCTTGCGTTAAGGGGACGCCTCAATAGT CTGTCTGTCTGTTTCAATAATAATAATCGGGGACAAAGTTTTTTTATCTT TGCAGCAGATCGGTCAAATTAGGATTTGATTAGGAAAAAATGAAGTGCAA AGTTTACATCCGGAAAAGACAGCAGTGGTAGATTTTGATGTGAAGAACTC CTTTATCTACTGCAATCCCCTAATTTATCCACTCATATTCACTGTTTTTT AAAAATGTTCGACAGTGTAGAAACTTGGAATTCGAGGCTCCTTTCGGCTT GAATGGATCTGGGAGGGATCACCTCGAAATATTCCCAATTATGATTACTC ACTTTTCGAAAACAAATTTCCATAGAGCAAAGATGACGGCACATGAAATA CCGATTGAACATATTGCGCCGATTGCTTTTGCGGAACCAGATTCAAGAGG ATCCTTTGGTTTAGGTGTTGTCGGTGTTGTTGTTGTTGTCGGTGTTGTCG GTGTTGTCGTTGTCGTTGTTGTCGTAGTGGTAGTGGTGGTCGTTGTTGTG GTTGTGGTTGTTGTTGGAGCTAAATAGGAAATAAGATTAATATAGCCGAA GACTAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039650XLOC_039650Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063267-exon-scaffold_385-1575043694:36786..37071TCONS_00063267-exon-scaffold_385-1575043694:36786..37071Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:29180..29324TCONS_00063267-exon-scaffold_385-1575043694:29180..29324Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:28732..28843TCONS_00063267-exon-scaffold_385-1575043694:28732..28843Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:27121..27220TCONS_00063267-exon-scaffold_385-1575043694:27121..27220Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:26674..26703TCONS_00063267-exon-scaffold_385-1575043694:26674..26703Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:26165..26369TCONS_00063267-exon-scaffold_385-1575043694:26165..26369Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:25217..25681TCONS_00063267-exon-scaffold_385-1575043694:25217..25681Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1575043694:23514..25183TCONS_00063267-exon-scaffold_385-1575043694:23514..25183Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:36786..37071TCONS_00063267-exon-scaffold_385-1510915933:36786..37071Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:29180..29324TCONS_00063267-exon-scaffold_385-1510915933:29180..29324Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:28732..28843TCONS_00063267-exon-scaffold_385-1510915933:28732..28843Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:27121..27220TCONS_00063267-exon-scaffold_385-1510915933:27121..27220Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:26674..26703TCONS_00063267-exon-scaffold_385-1510915933:26674..26703Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:26165..26369TCONS_00063267-exon-scaffold_385-1510915933:26165..26369Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:25217..25681TCONS_00063267-exon-scaffold_385-1510915933:25217..25681Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1510915933:23514..25183TCONS_00063267-exon-scaffold_385-1510915933:23514..25183Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:36786..37071TCONS_00063267-exon-scaffold_385-1491911889:36786..37071Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:29180..29324TCONS_00063267-exon-scaffold_385-1491911889:29180..29324Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:28732..28843TCONS_00063267-exon-scaffold_385-1491911889:28732..28843Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:27121..27220TCONS_00063267-exon-scaffold_385-1491911889:27121..27220Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:26674..26703TCONS_00063267-exon-scaffold_385-1491911889:26674..26703Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:26165..26369TCONS_00063267-exon-scaffold_385-1491911889:26165..26369Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:25217..25681TCONS_00063267-exon-scaffold_385-1491911889:25217..25681Clytia hemisphaericaexon
TCONS_00063267-exon-scaffold_385-1491911889:23514..25183TCONS_00063267-exon-scaffold_385-1491911889:23514..25183Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:23514..37071 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (68.2221 tpm) - - (172.773 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
164.663 172.773 155.989 160.448 122.908 98.8935 138.304 144.648 129.467 128.975 125.96 123.211 105.408 106.593 120.781 129.938 131.1 135.482 68.2221 74.1934 101.461 103.233 107.772 103.067 137.427 142.805 115.534 112.17 74.4016 69.3777
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063267 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
50010001500200025003000Expect = 4.02e-108 / Id = 77.56SequencePSB5
Match NameE-valueIdentityDescription
PSB54.017e-10877.56Proteasome subunit beta type-5 OS=Homo sapiens GN=... [more]
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