TCONS_00063256 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063256
Unique NameTCONS_00063256
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length577

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063256 ID=TCONS_00063256|Name=TCONS_00063256|organism=Clytia hemisphaerica|type=transcript|length=577bp
CTCAGCTCTGTACCGTACAGGTGAAAGATCTGGTCTGTAGATTACACATT
CGTCACTCGATCAACCACCACATAAGTGGAACTTCTAGCTCCAGCCATTG
GTGAAACAGGACTGAAAATGACAGACCCGAATGAAGAGATGCTACCCATT
TGACGCATGCTCAATCGTCCATTTTCAAATGGCGCCAAATGATTGAAACT
ACCAATGGAGGTAAACGATTTATCATTCTTTGTTTGTAGTAAGAATCTAT
TGGCTACTGTCTTTTGTGGAGTTGGATGTCCAGCTTTATCTAAACTATCC
ATACTGTGACCAACTGATGTTGCATCTGAATCCAGCTCGTATTTTTTCTT
GTCACATTGGCGtttttcgttattgttattTTCAACGATACAGCTATCGT
CTGACGAGTCGCTATTGATGAGATATTGTCTCGACGGCCCGTATTTCTTC
CAGAAAGGGTGGTCTTGTGGTGGGATAAGGAATGGTACTGCGAACATCAT
GATACTGGCAACTGTAGGGATTGCACCAGCAACGTAGAAAGCTACTTGAT
ATGATTTTGAAATGTCGTATAAAAAGC
Run BLAST on NCBI

transcript from alignment at scaffold_385:326335..339225+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063256 ID=TCONS_00063256|Name=TCONS_00063256|organism=Clytia hemisphaerica|type=transcript|length=12891bp|location=Sequence derived from alignment at scaffold_385:326335..339225+ (Clytia hemisphaerica)
CTCAGCTCTGTACCGTACAGGTGAAAGGTAAAATTATTGTTAAgtgagac
caatttgattattgttttacgggcccaaccgaccctgaaattttaaaact
cgaaataaaattgaaattaattttggtagtataatttttattttcattgc
tttgcagactgccaaattttcaaaattttggtgtgtctttttattttatt
tttcgcatttttgtcaagatgtagtagtgTTTGCtgtctttttaggagat
tttgaaggtgaaattctacttttatttttatttttcaccaGCCGACTGAC
CCTCTTTTTTTGGATAGCTTGCCccataaaacaacaaattaaattggcct
cgcctatATAGTAATTTTTGGTAAATCGAACATAAGACCGGAAGTGAGCG
AGTGTCTCTTAAACATCCGAGTTGGATTTGTTAAGATGTGTGGGCGATTG
CCCTACTAGTAATTTGTGTTATACGTTTTCATTCATGATATGGTTTTCTT
AAAACAAATAatcaaataatttcaaagaatatttgacacgatacaaaaat
taaaaaactttttttacggTTTTCCGTAGGGGCTGTGTAAAATCAATTTC
CGAAAAAGAAATAGTGTAACGACAGaattcgaaaagaaaattggcaaaac
ttTTCTTATTGTCCTATAACGTGAAAAACCTAAAACaggaaaaattgaat
aaatcaCCCGGGTGCGTGGGAAAAGTACATTTCACACCTGGGAACCTGAA
CAATTTTTCCTCTCAGGTGAATTTCTTGCACATTAGGTGTGAAATGCTAC
CTCCTCTCGGGCGAAATGCTCTTTTTTAATCGTGTAACTTATGTTATTAA
GTAATTCAATTGTATCGATTTCAAATCTTCTTTTGAACATCATCCTATTG
AACTGTTGAAaataccattgagtttaaagcccgaaaggctagagtAGAAT
TTCTAACCTAtcccaggcaagaaaaggtgaagccacttatttcccatcca
gaacgcaccTATAACGCGCCAAACTCATGACGACGGATGGTATcgagcgg
ttcctttgtttttgaggactgcattttttgaaatctgacgacagatttta
ctttcaatccggttTTTATGTAAAAATCACGCGCGAGCGTTCGAATTGGG
acataagtggcttcatttcccatccaagagtctcgagtctagcccNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgccggggggggggggtac
ttgggcaaaaataggtgctgggtatgtgcggacggtaagggtcgggtttt
atcacctttcaaagtctctctaagggttacaaaaatcaggaaatttcaaa
gtagtctctctaagggtggaaaaatcacgatttttagaaaaaaaatttga
ttttgagagaaaaaattacccccagggagtctagcccttcgggcttggaa
gtcaatggaaAATACTCTTTTGATGTATTATAGGGGGGATTTCCAAGTCA
TTACGCGATatttctaaaccaatcaaataACGAGCTTAGAATTATGTGCT
ACCTTAGCTCTGACGATAAGAAGTATTTTGCTGAACACATCGTCAATCAG
CGATTTGGGAAAAGATATGATTCATCGCCAACTTGGGCTAGAGAAGGGCT
AGATTTTGTCAAGGGaatatttacaagttttttattaattcttcaactct
taactcttcAATATACCTTTTCAACCGTAACCGCCATTTTCATCGCGgat
atttttttgtccgttttaccaccctaaaaccgttccattcttttcttcac
ctaaagacaatagaaaaaaaatgtaaaaaaaggatttgatCGAGTTTAGG
TTGGtaaattgaataataaagtggcgcgcgcctgaccgcgcgactacggt
ggAAAAGGTGTATACATTTATCAAATACAGAATATCGAAACGTAGATTTT
TAGATTAAAACTCCATTTTTGTGACTTTCAGAAGCTAACAAAATTGAAAT
GGATAACCGAACTAAGCTACCGCCAATGAGTTATTTCAAATTCCGCTACA
GTTGTTATTTGTACGTGCTAGATTTCAACTCAACTGAATCTTTTCGAACA
CTTTACGAACTTGAAGATGAAACTTTCGAAATAGTTGCTGGAATATTTTG
TTTCGCATTTTCCGCATTCATCATTGCTGCCAATTTTACATTCATGTTTG
GGTTGTTCAAAACTAACAAAGGATTAAGTCGCGTTCAGAAGTTATTCGTT
TATGTCTCATGCGTTGATTTACTTACTGGTTTTATTGGTATGCCAATGTT
AGGATTTAGTGTCGTCCGTGGTTTGACATGCCTTCAACAAGCTGTTATGA
TCTCCTTCATTGTGTTTCCAGTCATTGCCGATGGATTTGGAATGTTAACT
ATATCCTTACTGAGAGTGCGGTCAATAGTTAGGCCGTTAGGATCAACAAA
AATGGCTCGTCGTAAAATGGTTGTAATTATGGTATTGCAAAATATTCTGA
GTGTAATTTTTACTCTGGTTTTCTTCATAGTCTACACTGTAGGCAAGGAA
GAtatattgaattttcagattgtCAGCTATATGGCATCTGCGTTTGTGAT
CAGTTTGAACGCAGGAATATTGTCATGCGTTTGGTTTACCTTACATCATA
TCCGAAAGAAAGAAAACCAAGGTGACGAGCTAAGTATCGTGGATAAGAGA
CGACTAATCAACCAGCGGAAATCCAGTAAAACCCTTCTAATCATTACGTT
AGTAATGTTATTCTCGATGATTTTACAGATGCCATCTCTCATTATATTAA
ACAAAAGCTTGAACGATTCAACGCTTTTAGAAGGGAGTACCTTCATCTGG
ACAAAACGAAATgctgatttttcagcttttgtTTCTTCTCTGAACACTGG
TTTTAATTCAGTCATTTTGATGGCAAGGAGTAATAAAATACGAAAGTTTA
TAAAGCGACGTGTAACTACAGCTTTAACTATGATTACAACTTATTCAACT
GACTCTCAAGGCGTGTAACTACAGCTTTAACTATGACTTTAACTTTTTCA
ATTGACTCTCTGATTATGAAGGCCGTATCGTGTCTAATTTCATCTTAATA
GTTTTCAATGACACTTTGAACAATACGCTTTTGAACTCAATAGTTAAATC
Gcaatagaaaatttttggagttaaaattttttttatcattgaatttcaaa
tgggtatGAAAATAAAGTCAATTGTCCAATCGGGCtgaattgtagggtat
ttttcacaCCAGGGACGAAACTTTAGCCGAATATCCAGAGTGTAGAGGGT
TCAACCGGGTCTGTGCCAGAGGGGTGTAGCTTAGGCAGCGATGTTACAGG
GGGCGGAAGGTAGAATTGGTCTACTTCGCACTTCAATTCTTTTGTAATTA
GTctcattattattttattaaataTAATCAAGTAATTTATTctatttaaa
tattcttttaattCCTTTTTAAACAAATCATCCAAATATGACTTCAGCCC
CGAAATTTTGGTTACCAAAAGATCCTGAAGTCTGTTCTTTTAGGTTATTC
TACTTGAAAAGATATTTACAACGGTGAatcactttttaaaaacataccat
aaaatgggtgctgagaaattgttaaaaaagtactgacatacttttgagac
agactttaaatcaaatttaaaagatATCTTATAGCAAACCCAACTCATGA
AGATTTCAACCCTTGTTTTCATCGATTCGGCTGGTAGAGCCGTCTTCTCT
CCTAGGCTAGACTGGTACACCAGTCGGGGTGCGATGATATCACGCGAGAA
AAGTGAGCGtgggagttaggtaagcgtaggaagaaattttgtcagtGGCA
AGGGCTGAAAACTTTGCTTTGTTAATCAGCaacctctcaccaacttttgc
tcgttctcctacgcagttTCTATTTTAGCAAACGACCACCCTCTTTATGT
TCCCGCTCtatgacatgattaattaacagactagtttgctagtctacttc
tctttatttttctttggaaaattgaaCTGTCTAAGCAGATTTCTTGACAT
ATGATAAAGTTCAGTTTTAACCTAGGTATCAATaatcttttgataatttt
tcttttaattttaagGGTTTATCCATTtaggatttatttttaaaactaaa
tCATATATAAAAGATGGAAAATAATCGATCGATCGCCCTGGTCAccgaga
tttgatatttcacagaaaagtgctaccaaggggtatttcgggtcccatat
cttccgaaggacttttctgtttgccttgaaatttaacaaacttcttNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaaaaatgaacgttatagcataagtagaaaaaaagctcattt
tttgcaatcgcaaatttaaccgctaaaaatcgcgaatttttcaaccaaaa
atacattgaaatataGGGCTCttaattctctaaaacaagcaaaaaattac
cataattatatttgactgtcaaaagttacaggcattcttgtttccactgc
taattatatctggacagactttaattaacGTTTCCCTCATATATTTgctt
accgtgaaaagcacaggtcgaaatcatatatcgacgctgtgccgacgaat
cgagattctattcagcgcgcaatcaacgaagacaaaagtaaccatgacga
ccatccaagatcttggatgaggttcaaagttgatacttttattcccgtcg
ttgaaaacacaactcacaaatatcatcaatgctttttaaaaagagtcagt
gatagagaatcacaacaaaaagtctgtctattatttcgattcaattaaaa
tagcatttccataattaatagtttagtaactactgttatacatttgggaa
tcatgtaaaagatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNtagtaaactgcatactgatacagtctgctagacattaatatggtaata
tttactcttcatctttgattctttctacagtgattagattgacacatgcc
cgatgaaatttttattattggtcttcagaggttaatatattctttgaaaa
cttaacctctgatactcagggtaatatttgcttcattaaaaaactttcag
caaagttttgattttaacgTCCAACTTGCTCAAATGAAAACGTTTCATTC
ATTGATTCATCTCATGGATAGATTGACTTTTCATATATTTGAAACAGAAT
TTATGAAACTGTActtgtaaaatttttgattttaggacAGTTTGAGaacg
tgaaaaattgaaaagtggtATGGGTATGGGTCacttttccaccaaaattt
AACCTCTCTTTAGGGTCAGGTTTCAATGAACATTTTTGATAATCTACGTA
TATTAATAAGGGATTATGTAGAACAGGTAGTAGAAAGTTTTTGTCATTGC
TATAAATGGGATCCTCCAGAAAAGTTTTGTACATGGAGGGTGGGGTGGAG
GATAATTTTATATTGGATATTTCTTCCGGgagtagtgaaaaatctgcaaa
atttgccttgttttaggGGAAAACTTGCGCTAATTaagggtgattttgaa
tgttcGGGGGGTAagctgatgcttgtccgggggtgagATCCGTTGTCCGG
GGGATCAGAATTCACAATATCCGGGGGTACCATCCCcccatatttaaatt
ttttctggaagagcccaatcctTTAAGGGACCTTGGGTAGCTTAAAAACA
ACCCTTAAATCTTTCGATGTCTAAGGCAAATCgtatttttgacttttctg
tTAGCTATATAAAGCAAATtatgtcatttaaaaaaagatagtatcggttt
caaaaaatagtatcgCTATCGGCTTAACAAAGAAagtatctttttgaaaa
aaaagttaaagtcgttttaacaaagatagtgtagttttaaaagatagtat
ttatttccacTTTGGCGCTCCATAGTTTTTCAAACTTCATTACATACAAA
CACTTGAGACACTGTTTACCGATCTTTTAATAACGAAAACTAAAAGGttc
tatttttacataagtttcATGTCAGACACATATTACATATCGGGACTGTG
TCTGTCTATTGTTTGTATTATGCTTAATAagcaaaaacagtttttctttt
cctctttctagccaatcttgctccacatctgtgtcaattcaatgtgaaaa
agtcattaaaatttacGAGTAAAGGTTTGGGGAcacgagaattttttttt
tcgcgctggtgcaatgcaacatgctccatcccaccaacacaagaaaaaag
tgtgtgtctcatggtttctttttttattccatgggacaaaaagtgacgga
aataccccaaaaaaatcaatttcgctccattgtcccagggacaaaagtga
gagaagcacaaatgttattaaataaaaaatgggttggagacacgagaaag
cgtttcaggttggtagGATGTTGTATTGCACCAACACGAAAAAAACTTCt
ggtgtccccaagccttaagcaaacgatatcacttttatttaaaaacataa
cCTTTGATGTCACGACATCGCTGCAATTTTTGTAAGCAAAACGAAAACGC
TGGCTGTTCTTATGAGTAATGTGATATTGctaaagataaaaatataataa
gGACAATTTACAGTTAATTCTACTTAATGTTTGGATGAGTTTAATCACCC
TTGTTCCTGTTCATGTTTTTGTACCGTAAATATATATTCTTATTCCAAAT
CTTCCAAAAGTTTCCTTTTTTCTCACTGCCTCATTTCGAAATCCCAAACT
TATGCCTCCCAGTTTATCAAACACCCAAAGgtaatactctcgggtaccta
atagccgtcccccctgtcccgctaattaatttttcgaaaattttccacct
aggacattcTAACCCCcggcttattaatttttgggaaaatgtttttgaaa
gtttcctcttttgtcctaattcggCTGTATTAGctcccttttcaaaaatt
ctccacccaggacatttttattccaaccccccccctccACAGCttataaa
gttttgagattttttccaacttcCCTGCTTATTTTAactcccccgcttat
tccaatccccccggctattaggtacccgagagtagttccTAGATTTTCAA
ATTACGTAAACTCTTTTATTTAGTAGCTTGTTTTTTACCCTGCATTAGTA
ATAATTCTTCAGTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNcgatacaaaaattaaaaaactttttttacggT
TTTCCGTAGGGGCTGTGTAaaatcaatttctgaaaaagaaatagTGTAAC
GAcagaattcgaaaaaaaattgacaaaacttTTCTTCTTGTCATATAGCG
TGAAAAACCTAAAACAATAACCTGAACAATTTTTCTTCTCAGGTGAATTT
CTTGTAAGTTAGGTGTGAAATGCTTCCTCCTCTCGGGCGATCTCCTCATA
ATTTTCTGGATGAATGCTCTTTTTTAATCCTTTAATTCATGTTATTAATT
CACTtatcgatttcaaattttgagattagaacttcatttttgtAACTTGT
AGAAGCcaacaaaattgaaatgaataacCGAAATAAGCTACCGCCAATGA
GTTATTTCAAATTCCGCTACAGTTGTTATTTATACGTGCTAGATTTCAAC
TCAACTGAATCTTTTCGAACACTTTACGAACTTGAAGATGAATCTTTCGA
AATAGTTGCTGGAATATTTTGTTTTNCCGCTACAGTTGTTATTTATACGT
GCTAGATTTCAACTCAACTGAATCTTTTCGAACACTTTACGAACTTGaag
atgaaaatttcgaaatagtTGCTGGAATATTTTGTTTCGTATTTTCCGCA
TTTATCATTGCTGCCAATTTTACATTCATGTTTGGGTTGTTCAAAACTAA
CAAAGGATTAAGTCGCGTTCAGAAGTTATTCGTTTATGTCTCATGCGTTG
ATTTACTTACTGGTTTTATTGGTATGCCAATGTTAGGATTTAGTGTCGTC
CGTGGTTTGACATGCCTTCAACAAGCTGTTATGATCTCCTTCATTGTGTT
TCCAGTCATTGCCGATGGATTTGGAATGTTAACTATATCCTTACTGAGAG
TGCGGTCAATAGTTAGGCCGTTAGGATCAACAAAAATGGCTCGTCGTAAA
ATGGTTGCAGTTATGGCTTTGCAAAACATTCTGGGTGTAATATTAACACT
GGTTTTCTTCCTAGTTTACACTGTAGGCAAGGAAGAtatattgaattttc
agattgtCAGCTATTTGGCATCTGCGTTTGTGATCAGTTTGAACGCAGTG
ATATTGTCATGCGTTTGGTTTACCTTACATCATATCCGAAAGAAAGAAAG
CCAAGGTGACGAGCTAAGTATCGTGGATAAGAGGCGACTAATCAACCAGC
GGAAATCCAGTAAAACCCTTCTAATCATTGCGTTAGTAATGTTATTCTCA
ATGATTTTACAGATGCCATCTCTCATTATATTAAACAAAAGCTTGAACGA
TTCAACGCTTTTAGAAGGGAGTACCTTCATCTGGACAAAACGAAATgctg
atttttcagcttttgtTTCTTCTCTGAACACTGGTTTCAATTCAGTCATT
TTGATGGCAAGGAGTAATAAAATACGAAAGTTTATAAAGCGACGTGTAAC
TACAGCTTTAACTATGACTACAACTTATTCAACTGACTCTCAAGGCGTGT
AACTACAGCTTTAACTATGACTTTAACTTATTCAACTGACTCTCAAGGCG
TCTGATTATGAAGGCCGTATCGTGTCTAATTTCATCTTGATAGTTTTCAa
taacattttagaaaattttattagTCTTTTTTGCAGCCCTAAAAACGCCC
TGTCtaacagccccggtgaaactgaatagggataaaaattctattgttct
cgggtcaaaaaaaatcaagtgggGATGCTTTTggagtgaaatatttttat
cattgaatttcaaatgggtatGAAAATAAAGTCAATTGTCTGCATATGTA
AAAGTCAATATTTTTCACACCAGGGACGAAACTTTAGCCGGAATATCCAG
AGTGTAGAgggttccaccgggtctgtgccACAGGGGTGTAGCTTAGGCAG
TAGAGTAATGTTACAGGGGTCGGAAGATAGAATTGTTCTACTTCGCACTT
CAATTCTTTTGTAATTAGTCTCAGTATTATTTTAAATATAATCAAGTAAT
TTATTCTATTTAAATGTTCTTTTTAAATTCCTTTTTAAACAAATCATCCA
AATATGACTTCAGCCCCGAAATTTTGGTTACCAAAAGATCCTGAAGTCTG
TTCTTTTAGGTTATTCTCCTCGTAAAGATATATTTACAAACGGTGAatca
ctttttaaaaacataccataaaatgggtgctgagaaattgttaaaaaagt
gctgacatacttttgagacagactaTAAATCATATTTAAAAGATATCTTA
TAGCAAACCCAACTCATGAAGATTTCAACCCTTGTTTTTATCGATTCGGC
TGGTAGAGCCGTCTTCTCTCCTAGACTTGCAAACCAGTTGGGATGTAatg
gtatcacgcgggaaaagtgagcgtaggagttaggtaagcgaaggaaaaat
aatttttagtaGCAAGGGCTGAAAACTTTGCTTTGTTAATCAGCAACCTc
ttaccaacttttgctcgttctcctacgcagtttctattttagcaaacgcc
cgccgcctttatcttcccgccctctgacatgattaattaacagactagtt
tgctagtctacttctctttatttttctttggaaaattgaaCTGTCTAAGC
AGATTTCTTGACAAATGATAATGTTCAGTTTTAACCTAGGTATCAATaat
cttttgataattttttttttaattttaagggTTTATCCATTtaggattta
tttttaaaactagATATAAGATGGAAAATAATCTATCGCCCTGGTGACTT
GTCTTGACTTATGTCTTGTACTTTtgattgcaaaatattttttgatttga
tataGATAGAAAATCCTTGAATTTTCTTGACACGCACATCGATTACTATA
AACATAAACTCTTCGATTTCATTCATGATTTAATTTGGGTGGTAGTGTGT
TCACACCtatgtatcccaggctttatttgcGTTATTGATGATGGGTGCCG
GAGAATATCTGTTTCTATCAACAAGCATCAAAAGGCCGATCATACACAGG
GAAatcccatagatttataaaagcccgaagggctagatagagtgcttttg
ctgaaaagtgtgccgaggttacccagctagcacacaacgtcTTTTCatcg
tttatctaacgttcacgatgtccatataacgttaggtgaacgtgacatta
caatagaatttcagcgcttgaccgaTTTCGAAAACATTATCAGCAATATA
ATATcagcgatattcactttttttgcttggaagaacTTAAAGCACGCTAT
CTAGGCCTatctagccattcgggcttCATAATTATATGGGAAATCCTCTC
AgattataatataattttaaattctttaaaattagaATCTCACAAGGTAC
AGTATTGGACCTCAAAAAGTGACAACACAAAGACTCCTCATTCTGTCGCT
ATCTTAGCCAAAATGCAGGAGCAGAAGACCGCCACTTACTGTTATCCCTG
GAGTTCTTCCCTTTTCACCATACTCCTCTTTCATTACTTAAAGATTCACT
GTATTTCCTTGGTGAGATCTGGCATAGCGAGTTAACCTAATGACCTTTTG
CACCATAGCCAAtgctttacacgttttttaataagaatatccaacatttt
tgaatccTTCGAATGCTCCTTACTCTTCTAGccttcttaacatgttctta
ttttcaccattttgtgagtatttttgtccattttcctaagaaaatagatG
TTTTATGGTCCAGTATGGCCagtaaagtcttaaaatgttcttatatagtt
tgttctcattaaaaaaatacGTGTACCTAAGGATATTGATATATGAATAG
AAACgaaatcatttaaaattttaagaagtttcttttttttatcaacTATA
CAACTAGTCGTTATCGCTAATTTATTAATATgctataataaaaaataata
caaaTTAATTATAAGATTATGTACTACAGTATAAATTATAAGATTTAATA
AAAGAGAAGATCAATTTGTTAACTACATTAATTAATAACTATGATTGATT
GCTCTTGTTTGTTGTATCATTGATATTGTCTCGGTATAGTGTGTTAACAT
AtttcttaaatataatttttcgttttttttttgttgttcagATCTGGTCT
GTAGATTACACATTCGTCACTCGATCAACCACCACATAAGTGGAACTTCT
AGCTCCAGCCATTGGTGAAACAGGACTGAAAATGACAGACCCGAATGAAG
AGATGCTACCCATTTGACGCATGCTCAATCGTCCATTTTCAAATGGCGCC
AAATGATTGAAACTACCAATGGAGGTAAACGATTTATCATTCTTTGTTTG
TAGTAAGAATCTATTGGCTACTGTCTTTTGTGGAGTTGGATGTCCAGCTT
TATCTAAACTATCCATACTGTGACCAACTGATGTTGCATCTGAATCCAGC
TCGTATTTTTTCTTGTCACATTGGCGtttttcgttattgttattTTCAAC
GATACAGCTATCGTCTGACGAGTCGCTATTGATGAGATATTGTCTCGACG
GCCCGTATTTCTTCCAGAAAGGGTGGTCTTGTGGTGGGATAAGGAATGGT
ACTGCGAACATCATGATACTGGCAACTGTAGGGATTGCACCAGCAACGTA
GAAAGCTACTTGATATGATTTTGAAATGTCGTATAAAAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039641XLOC_039641Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063256-exon-scaffold_385-1491911889:326335..326361TCONS_00063256-exon-scaffold_385-1491911889:326335..326361Clytia hemisphaericaexon
TCONS_00063256-exon-scaffold_385-1510915933:326335..326361TCONS_00063256-exon-scaffold_385-1510915933:326335..326361Clytia hemisphaericaexon
TCONS_00063256-exon-scaffold_385-1575043694:326335..326361TCONS_00063256-exon-scaffold_385-1575043694:326335..326361Clytia hemisphaericaexon
TCONS_00063256-exon-scaffold_385-1491911889:338676..339225TCONS_00063256-exon-scaffold_385-1491911889:338676..339225Clytia hemisphaericaexon
TCONS_00063256-exon-scaffold_385-1510915933:338676..339225TCONS_00063256-exon-scaffold_385-1510915933:338676..339225Clytia hemisphaericaexon
TCONS_00063256-exon-scaffold_385-1575043694:338676..339225TCONS_00063256-exon-scaffold_385-1575043694:338676..339225Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:326335..339225 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.0498222	0.174888	0.453075	0.671917	1.6262	1.32888	1.21779	0	2.03448	0.404148	0.167404	0.149607	0.0635377	3.13772	1.77441	0.416006	0	0.458579	0	0	1.99164	0.453194	0	0.276506	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top