TCONS_00063337 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063337
Unique NameTCONS_00063337
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063337 ID=TCONS_00063337|Name=TCONS_00063337|organism=Clytia hemisphaerica|type=transcript|length=129bp
AAAGATCCCATACTCAAGCCCAATAATGAGCGTGAAAATACAGTAAGAGA
TAAAAGTTCTTTGACGTTTTCTTCTCCATGATTCTGTTTGCAAACTGCCA
GCCTCATCCACAACCATATTTTGCTAGAG
Run BLAST on NCBI

transcript from alignment at scaffold_385:388174..388302

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063337 ID=TCONS_00063337|Name=TCONS_00063337|organism=Clytia hemisphaerica|type=transcript|length=129bp|location=Sequence derived from alignment at scaffold_385:388174..388302 (Clytia hemisphaerica)
CTCTAGCAAAATATGGTTGTGGATGAGGCTGGCAGTTTGCAAACAGAATC
ATGGAGAAGAAAACGTCAAAGAACTTTTATCTCTTACTGTATTTTCACGC
TCATTATTGGGCTTGAGTATGGGATCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039687XLOC_039687Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063337-exon-scaffold_385-1491911889:388174..388302TCONS_00063337-exon-scaffold_385-1491911889:388174..388302Clytia hemisphaericaexon
TCONS_00063337-exon-scaffold_385-1510915933:388174..388302TCONS_00063337-exon-scaffold_385-1510915933:388174..388302Clytia hemisphaericaexon
TCONS_00063337-exon-scaffold_385-1575043694:388174..388302TCONS_00063337-exon-scaffold_385-1575043694:388174..388302Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:388174..388302 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063337 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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