TCONS_00063346 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00063346
Unique Name	TCONS_00063346
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2480

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_386:27433..47629+

transcript sequence

>TCONS_00063346 ID=TCONS_00063346|Name=TCONS_00063346|organism=Clytia hemisphaerica|type=transcript|length=2480bp
ttctgCCAGGGGTGGGGGATgggagtacttaggcaaatgaagGTACgagt
atgtgccgcccttaagggtgccttttctGGATCttcccaagggtcccaaa
attcacaaaattttgcttttctCAGTTTTAGAACTTAAAATgtccttttt
tcaaaaaccttcTGTCATTTCCCAAATTTAGTAACCCCGAGATTTCGCAA
ACCTACTACCCCCGAGATTTCGCAAACCTACTATCCCCGGACTCCCCCAA
CTtgttaaagttttttattttttccaaccctgataccttattaggacccc
tgTTTATGGATTTTTGGAAATACTTTTAGCTTTCAAAAGAAGAGCCCCTT
ATTTTGTTCTAAACAGAACCTAGTTTCCCTGGAAATTCACAAGCAAATTA
ATCCTTTTTCTAATTACATATTTAACAAAAGCTTAGTCTATGGACTCTCA
TAAAAGATGATTTGATTCATAAATTTCTATTTATTACATGACAAAGTTAT
AGttatcaaaaaatcgaaattgttTTGTAAATGCCACCAAGTCCAAAAGG
TTTAACtgttatttcaaaatcaaagtctTCAGGACCTTTATAATCTCCCC
ATTCAATAAATTTGATCTTCATTTCTTTcattacattttgaaatttatca
atATTGTCTCTTTTCAAATCAAGTACACATAGTTCAAGACAAGTAATGGG
TACATCCTTAAACAATGCGAGCTCTTCTGGTGAAAGCAAGAAAACATGGT
AATTCTGTTGGAGGTAAAATTCTGTCAAATGTTTCATACGAGAGAGTGTT
TTTGCAATATCTTCTATTCCCCCTTCATGAAATTCGAAATTCCAGGAAAT
TAAAAACTTAATTGGGAGGTCTGTCAGCAATTCCAATGGTGCATAAACGC
CGGTATCTTGATCAAAATCGTCACATTTGAACTCCTCaagatatttcatt
ttcttcatcacCTTTGCAAATTCAAGAAGTTTAGAGACTTTACCTTCAGT
TCTTAAAGACCTACTGTTGATAGTTGTTATCTTCAAATCAAACTTTACCA
TTAATTCTAAATCTCTGACTGTATATTTGTGGTAAGCAATTGAGCTGGGG
TGCGGAAAAATTAGCCGGCAATTCTTTATCGTAGCTAGAAGTATTATAAA
TTCTTCAGCATTTTGATCATTTATTTCAAGACAATCCATCCAGATTTCTG
ATATCCTAACTTTTCCAACAagcatttcaaaatttggaaaagaaaACCTT
ATACTTGATTTCCCATCGTCGTACACAGGACATGAGCGATCGATAATCAA
TTCCTTAACATCAATCAATTCTATTATCTCTGACAGCTGGCTGAAATGTT
CTTGTTCACTCAACTCCAAAGCCTTGGTATAAACAATGGTGGGCACTTTC
AATAAGCGCAGACGTGACATTTTTGGAGTTTTAATTCTATATTGGCTAAG
TTGTTTAGGGGCAGTTACATGTAAAAGTTTTAATCTTGGAACTAAAGTGA
TGAGTTCAAACCAAGTACAATCAAAGTCGCCGGTCAAGAACAAGATGAGT
TAAAGAACAAAAGAGATGATTGTTTTAGAAAGTGCATCATCGATAATTAC
AAATGCATTGTAAGCGGCCGCACGGACTGTGGGCGACTTCAAATTGAATG
TGCaagaaaatgtacaaaaataccCCCATCAGgtaTGATGATCTAAATCA
GAGCGACTTCAAAGGaaaagaaatgataaaaaacaTTATGACTAAAATGT
TTTAATCAAGAAAAAAGGATtaaaaaccatattatacgAGTCGTTTTTTT
TGCCAATTGGATGAATGTCGCAGAAAtacaccaaaaatgaaaaatgtccA
AAAGTTTTCAAGATCTCGTACGCCACACATGTCAAAGTGAAAAGACCCGG
TggagcctccccacttttgagcaaaatagACTTTTTACAATCTGATTCCT
GGCGAATtctatctcattttgagcctttagCCTCTCTACATTTACGGTTG
TTCAGCCGGGCCTGAAGTGGTGAAAAAGTTTACATCTTCTATACTAAATT
TGAGCTAAATCGAGAATTCCCGAGGCCATTACATGCACTTATCCGCCAAT
CTTGGCGAGATTTGAGAAAGTCTACAAAAATTGGGTCGCGCCAAAAAAGA
ATAAGAGCAAATTTTTAGCCTTAAGAAAATAAGGCATATAATCGATTCTG
CTTCTCTGGaccccagggggggggtacttaggcaaatggagggtacggta
tgtgccgcccttcttttttggacttccaaaatcccgctaagggtcggaaa
aatcagaaaatcaaatttcagtcccagtaagggtcggaaaaataggaaaa
tttcaactttttaccccctgaaagatcaaaatTTGGTCAAAATTGGTCAA
ATTAGTCCCGCTAAGGATCGTAAAATTCCCAAAATtttcctttgttttct
tctttttagtcccggtaagggtccaaaatt

Run BLAST on NCBI

transcript from alignment at scaffold_386:27433..47629+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00063346 ID=TCONS_00063346|Name=TCONS_00063346|organism=Clytia hemisphaerica|type=transcript|length=20197bp|location=Sequence derived from alignment at scaffold_386:27433..47629+ (Clytia hemisphaerica)
ttctgCCAGGGGTGGGGGATgggagtacttaggcaaatgaagGTACgagt
atgtgccgcccttaagggtgccttttctGGATCttcccaagggtcccaaa
attcacaaaattttgcttttctCAGTTTTAGAACTTAAAATgtccttttt
tcaaaaaccttcTGTCATTTCCCAAATTTAGTAACCCCGAGATTTCGCAA
ACCTACTACCCCCGAGATTTCGCAAACCTACTATCCCCGGACTCCCCCAA
CTtgttaaagttttttattttttccaaccctgataccttattaggacccc
tgTTTATGGATTTTTGGAAATACTTTTAGCTTTCAAAAGAAGAGCCCCTT
ATTTTGTTCTAAACAGAACCTAGTTTCCCTGGAAATTCACAAGCAAATTA
ATCCTTTTTCTAATTACATATTTAACAAAAGCTTAGTCTATGGACTCTCA
TAAAAGATGATTTGATTCATAAATTTCTATTTATTACATGACAAAGTTAT
AGttatcaaaaaatcgaaattgttTTGTAAATGCCACCAAGTCCAAAAGG
TTTAACtgttatttcaaaatcaaagtctTCAGGACCTTTATAATCTCCCC
ATTCAATAAATTTGATCTTCATTTCTTTcattacattttgaaatttatca
atATTGTCTCTTTTCAAATCAAGTACACATAGTTCAAGACAAGTAATGGG
TACATCCTTAAACAATGCGAGCTCTTCTGGTGAAAGCAAGAAAACATGGT
AATTCTGTTGGAGGTAAAATTCTGTCAAATGTTTCATACGAGAGAGTGTT
TTTGCAATATCTTCTATTCCCCCTTCATGAAATTCGAAATTCCAGGAAAT
TAAAAACTTAATTGGGAGGTCTGTCAGCAATTCCAATGGTGCATAAACGC
CGGTATCTTGATCAAAATCGTCACATTTGAACTCCTCaagatatttcatt
ttcttcatcacCTTTGCAAATTCAAGAAGTTTAGAGACTTTACCTTCAGT
TCTTAAAGACCTACTGTTGATAGTTGTTATCTTCAAATCAAACTTTACCA
TTAATTCTAAATCTCTGACTGTATATTTGTGGTAAGCAATTGAGCTGGGG
TGCGGAAAAATTAGCCGGCAATTCTTTATCGTAGCTAGAAGTATTATAAA
TTCTTCAGCATTTTGATCATTTATTTCAAGACAATCCATCCAGATTTCTG
ATATCCTAACTTTTCCAACAagcatttcaaaatttggaaaagaaaACCTT
ATACTTGATTTCCCATCGTCGTACACAGGACATGAGCGATCGATAATCAA
TTCCTTAACATCAATCAATTCTATTATCTCTGACAGCTGGCTGAAATGTT
CTTGTTCACTCAACTCCAAAGCCTTGGTATAAACAATGGTGGGCACTTTC
AATAAGCGCAGACGTGACATTTTTGGAGTTTTAATTCTATATTGGCTAAG
TTGTTTAGGGGCAGTTACATGTAAAAGTTTTAATCTTGGAACTAAAGTGA
TGAGTTCAAACCAAGTACAATCAAAGTCGCCGGTATGCAGCTCACTTATT
GGAAACTGTGATATTTTCTcaagaaaatcaatttcttttgcTGGCCATGA
ATATCTTGGTTTCAACCATATTCTTTGAAGGGCAAATGAGTACATTCTCT
TTGATACAAGTGACATTTGTTTGGCACTCTTGATATCCAGATACGAAATG
ACAGTTCGTAACAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGAAAGTGGAattgctaaaatagcaattctcgcccgaact
ttaaattctgaaaaacgttaaaatacactaaaatctcaatatatttcaag
ggAGATtgcaggacattcttattccaacccgNAGGACATGAGCGATCGAT
AATCAATTCCTTAACATCAATCAATTCTATTATCTCTGACAGCTGGCTGA
AATGTTCTTGTTCACTCAACTCCAAAGCCTTGGTATAAACAATGGTGGGC
ACTTTCAATAAGCGCAGACGTGACATTTTTGGAGTTTTAATTCTATATTG
GCTAAGTTGTTTAGGGGCAGTTACATGTAAAAGTTTTAATCTTGGAACTA
AAGTGATGAGTTCAAACCAAGTACAATCAAAGTCGCCGGTATGCAGCTCA
CTTATTGGAAACTGTGATATTTTCTcaagaaaatcaatttcttttgcTGG
CCATGAATATCTTGGTTTCAACCATATTCTTTGAAGGGCAAATGAGTACA
TTCTCTTTGATACGAGTGACATTTGTTTGGCACTCTTGATATCCAGATAC
GAAATGACAGTTCGTAACAATTCGTTTGGTAACAAATCAAAATCCATCTT
TTTACTATTTATATACCTTTAAATAAttggaaaagaaaagatttactATT
AAGgcataaaaatttatttgatctttaccgtcaactgctccaacttggga
cgagtgtacgcaacatgggacttgttgatatctggtctgtattttcactt
actgtaaaatcgaaagggaaatcgtgtattttttaatacgcggttcatta
aactcNaattgcctaaaatttgagccatagatgaaaaaatttgagccaag
ccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagatctga
ttttggttggttgattttggctgctgcacgtttaNtcccgccaaaatgcg
tatcaaagattaatgatgcgaaagcgctatatcgtttacttgactctcaa
gcaaagaaatgcgccgcaaaacttctactctcgggtacttaatagccgtc
ccccccccgctaattaatttttcgaaaattttccacccacaatccttcaa
gaaatatttgaNAACTTGATTCaagtaactctcatccttgttgttgaaat
gtatcctgtagatgactgatgttgttttttctgaaagcttaatttcctag
tgtgactaactgtcaaatctaatgacttttgaggttcggtgaaatggtgg
tggaatggccatcccatgttgcgtaagatagtcccaagttggagcagttg
acagtatctTGAGCCgaagtgcactctaagggtgcaTATCATTtagccaa
aaacccaaaaaagtgaaacagaggGTTCAGTGAACGCATTGAttgattca
tttaaaagtttacCTAAACAGACGATCAAAAGCAACAgtcttttttctgt
gttttcttcGTTCGCTAAACCGAGGGTTTAGCAAACAAACTGTACGATTT
GAGTTTTTGTTTTGCTAAACCATTATTCTAACCAAGCACTAAACCATTAT
TCTAACCAAGCACTACACCTTGTTTACGCTGGTTCACTAAGCGCACGCAT
GAATAAGCCCTAAGCTTTAATGTTTTCTTCCGctgggctaccattttgaa
attcgttGCTGTGACTTCAGGCAAGATCCTAGAAATCGAATTAGCAATGt
aacccaaaccatttgcagtttagtgaaacagtttcagttttttttggttt
tgaacattaaaaggTATGCAACCTGAGGGTGTAAAGTGTGAAAAAtgaag
gcctaattttgggctacGTAATCAGTTGACTTTTTAAATCAAATGTCCCG
CTCCTCAACCAAatacttctttaaaaaactgaACTGCTATTTTATGTGAG
CTATGTTGCACCAAGAAGGTTGGAAGCAATAAATTGGGTGAAACAATAGC
TGTAGCTGAAAAAAAATAGaccgagcagaaacttttgcgtcacaaaaaat
cgcgaaattcacgacatttactttcgcgaatttaactataaaatattttt
cgcgagcataaacttttgcgaatcaaGACATAAAACTGAGAATTtttaca
tgaaaaaatggcttagagggacaaatactccTTGGATTggtttgaaacat
ttgtcctttgacctattagtcttttagcagtctaaaaagtgccataaaag
ttacattttattcaaagtttgaagttttacagattttctgttttttcaag
aattttttgcgagcataagCTTTCGCGAAtagcccttcctagaatttttg
aagacatttactttcgcaaaaagggccaaaatttgcgaaaatcacaaaat
tcacgctaatttcttcaaaattttgcaatGATTCTGAATATCTAGACAAA
ATCAGTCGGAAATTAGCCAATCAGCTCGTTTTTGcaaaaaactacaaaat
ttcctatataggaaatatttcagaggtcaaatttccaaaataagaaattt
tcaaCCTCAAAATTTCGCATAGAATTTCCTATTTAGGAAATAATTTCATA
AATAGGAAACTTTTTCTGACtggttaaccaaatacaaaatgactgtattc
ttatcgaATTCagtgaaattcaccctagagggtattcttaaggtattctt
acgatttggccaattttcaccctgatattcttatagaagatattcttata
tagaagatattcttaaaaaaagcatgtatGAGAAGGCGAGAACTAAAATT
ATATTAgcgaggtctgttagcacaaaaatacttcagatagtgaaaaattg
aattgaattgaatatattttcgctgcaatgCAGCAGGAtgccccttacaa
aaaaaatagatttctctaatacaatgggaaacctagaagaaactgaattt
tttttacagaactaaagaaaaaaaatgaataaacgattatcataatatta
atagtaacaacaaaataatgaatataagaaatatttctacTTTTAATTTA
TGACAATTTCTTTGAGtagttttatttgaaaagttcttcttgttacacca
cccaccccctcccaccctgggaaaacacactaagttCACGCACACACATT
CGAACagaaacacacacacacacaaagattattcctcttcagctttgtat
ttgtctaaatagaatttttagctaaagattttagttcatcagtatcaagg
ttgtgaaaatcagtgtcaggatgatttattagtaactcattccattgttt
tgacgaaagacgagagaaagagttaagtccaaaatttgtggttttgaccg
ttgaaagttttttagtagtttaatagctttgcccctggtgccagttttgt
gatcaatttcatcaaaattaagtgttgataggACATCAGTTGGAAGATTG
CCCTGgaggtatttttgaataaatgagatattcattactttcacCTGAAT
TCactaaaagcatgaaatttgacaTAGATAATCCtaagagggtctaaaac
ttaatttttttaaaaacagtaacaccaaattttgtcacCTGGCcccctgc
cagatgacgtcatcaggtggctgggcaaaaaattaattttttgaaaatat
tcaattattttgtaattttggagcaagttgaccaaatttgatgttttata
caCGAATCCCTGTCAGAATTCAATGGACATTCTGCTGCTTTGGTCCAAAC
GACAAGGGAATGcttaaaaacgtttaaaaaatttaatcGGTTATACACTG
TGTTCCTGTTCTGGTGCCGCGGCGCCTTCTACAGCACTGCCATATTCTAC
AACTTTACTGTTGTTTTTTTGCAACGCTTCAACAGGGCTCAAGGTGGAAG
TGCACAGTAGTTTCTCTACAGTACCCTGTTATATACCTCTGTTTTATGAC
GACTTCTAAACTAAGTATCTATATATTGCCTTTTTAGTAACCTTGTCCCT
TGTATAGAtgaaaatttctcaaagtttttgaaaatgttgatttcattaaa
aagcgccaggttattttttcatgaatccctttaacagttttgcggcgcat
ttttttgcttgagagtcaagtaaatgatatagcgctttcgaagcattaat
ctttgatacctattttggcgggacgctagtgtgactaactggataagacc
ttatgttaaaaacgaaagctaTTACggcaaaaatagcaattttcgtaata
cctcaaatattaatacttgactgtactgaaagtgtccgaaaaaatgGCAC
CTATGTTATTTTGATTCTCCTAGCTACCATGatgttgggtaacttgcatc
agtggaggcaaacatgcatagccatcaaatgactgaccactcaaagcagc
aaaatttcaaaacaaatgaactacgcagctctgctcgcagctctactcta
ccgtttttgttttgatttaagtttgtattttaatgaccagattGGTCATT
tgtttgagggctatgcatgtttgcctccactgatgcaagttacctgactt
cacagtaccccttagctttccaaaaatccaggtgtagttaatcgatataa
tcaaTAATCTtaagtaatcgataaataatcgattttagtaatcgatggat
tagataccggatgttggtctaatatcgacatccctcgtctaattccgaca
cccttctttagagacaggaataatataaaagcttgaatcactgattgaaa
aaggattattcctctctgaccaccaagcaaagaaaaacagtttcaacctt
tctatcaatttcagctaataaaaagggtgtcggataTAGAGGagagatgt
cgacattagaccaagttatggtatcgattaaccgatagaatcgataccta
ggtaatcagaccttcaaaaaatcttgagtatcgatcagcaatcgattatt
tccaagctatcgattacttatcgatcacatattGACTACATACAACCtgt
cgattctatcggttaatcgatatctaatccatcgattacttatcgattat
ttatcgatttctcaagattatcgattatatcgattaactacgcctggaaa
aatgtataatataaaacataacaagtgctttgactaaaaaagtcgaacaa
cctaaaaaaatctaacaaatttccccctactaaaagACGTATCTGCTAAA
CAGGTGTCCAGCATGTCGGTTGCAATCAAACATCTAATAGTCTCTTTAAT
GACATTTTGACATTTCTCTTTCCTTCTGGATTCTTGAGTATGTCTCCGGC
CACATGTTTCACAGCTTGTGCTACCATTTTGGGTAAACAAATAAGCTCAA
GTCaacagtcaggaactattgcaaattaggctatgatGGCCAAACTAGGA
TGTTCGCCTAATTAGGCTAGGATTtatatcctagttaggatattAATGGC
TTAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTAATTTGgatatatgaa
atattcaaaCCTAAATATCTTGAGAACAAGTAAAATCCGCGTCAATCTTA
CTACATGGACTTGTTACTTGTACTAAGAAGAGTTTTTAAAGcgaaaaact
tttctctttttagagcGGAGTGAAAAGATATGATTATCTTATTAAGATTT
AGCTTAATTTGGCCATGATTTAAGTTCTACATGCAGCGCGccattttttg
tctgaaaaatgaaaaaaacttagTATCATAAtatatgaggcccccccagc
ggacccaaaattcacgccatcacgccaatttcttttcgatttcacgccat
cacgcctgaaaattttgattttcacgatcacgccaatttttctcaatttc
acgccattacgcctagaaaattagttttcacgCTCATTTTCTCTGGATAA
ATGCAGCTTTATACCACGCTATATATCCATTGGTATGGATAAAATCCCGt
tatataaacttaatttttgcccacAAATAGGTATGTGCTTGGTCGCcaat
cagtttttcggcattctcataCGCGTAAGGCACGATTATATCATTTTTGC
TATCGGAAACACCTAAAAAATCTGCAAGGAATttgacctctgtttttcta
tttctagtaaaacacaggggtcaaattccagttttttcgggtgtttccga
tagaaaaagtgacgcaattttgacttatgcatatcaaaaatagTTTGACA
ACTGGTGAGTCACATGAAAGGGCCCCAGCttgagggctgaggtatatttg
agtaaattgacaaagcccactatggttgggcaacggagaatatttttgaa
ttttgaagggttcaaagtgctatttttggacccatttcaattcaatttga
aaaataattcatgtaaaaataatggaaatctttaaaaagtagCTTTGGTA
AAAACATGAGGGGTCAGGCCCCCTGGTCCCCCCATTGACGGGacccatgg
gcattaattgtgaattagcgtgaatagttttcaaaaggggaacgaggagg
cgcaaccattgtttgcgccgacgggagaaattttcaatttagtatggcta
cAATCGCTCTcatttaatcttttttccaaaatatggcttaaacatcacag
gattcctttgatGCCAATCTGCTCAAAgttacacctcataataaacctgt
tgcttctttctgtttaaggctttgctacaaatatatcttttcctgaaata
aagaaCCTGGTGTCTTTGATACATCTAAGAATAAGCATTtaagaaagaga
ggaaaatgttagttacggaggaagcgcaaccatggtttacaCCGACGGTA
GAAATTTTCtaccctctcatagcattcgactttattttgaagattagcta
gcaactgctaaagacaattggaagttataaggataaatggcagatgaata
aaactttcttttatattctAAAATGAGATCTaatagttggggccgaccaa
gaaaattttgaattttaaaccttctaaattggctaaaatggtcatagaat
tacgattcaagtagtaaatataattttcacgatcacccgaactgcaaatt
tcacgccatcacgcctaaaaaaactcgatttcactaTCACGCcagcactt
cattttcacgccatcacgccgtttttttcaaaatttcacgccatcacgcc
gcgaaaaaccctccatcacgccatcacgccaaccgcacCCTCGaccccat
ggcttatctaacccccttacgctattgatgattctgatggacgcgttgac
gggggatataagccctggtgcacttTAAAAACGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgagaatttgaaaaaatcaaaacaagctaaataatg
gctgatgtaaatagtaaatttaaaagtcaaagacagattctcaacatgaa
gaagttgaagtatgaaaaactcttggcaaaccaatcaattgacaAAATTG
AAAAATGTCATTTAAATGAAACTTGATTGGCAGAGAAAGATACTACGAGA
CCTTGATAAGCAGTCTATCCCTGCACTGAGCGAACTGGAACTGcttgtaa
aacgattttttacagaaagacaaatggaaaatagtttaaagattcactcg
aaaagaccctctgctgtccacatataattgttttgcttgaactgaTTTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNaaaaaagcatacatctccagtgattgcttgactggtagtcaa
aatgaactgatcggtgaagaagctttttcagaaaaacttgagattACGTA
CAATACAAACTCACAGCAAAAATGTTCTGGTTATGGTTTATACAATTAAA
GCTTGGCAATATGTGAAcaattctaatcaactgatgaatgtgtaaaagca
agaaacttcaagtattgNTTAAAAGCTTGGCAATTATGTGAAcaattcta
atcaactgatgaatgtgtaaaagcaagaaacttcaagtattgaaaaagaa
ataaatctgtttctttaaacatatcctattaccagactgaaaatttattt
atattgaccgtaaatgtcaaaaagtatacaaattggtatggtacagtgtg
tatattggactaaatttgccaaaaaatgttgaagctggaagtagtttttt
tatcgggatacaatttatgcaaacatataTNAATTCCAGAATAGAACTTT
AAGATTAtatatgtcttttcagttcaagttctgttattttgatacaaaat
gattgagaaatttactacaaaaaatacatatctctgctttttttttgtaa
atgtcacattttctttggagcaaagctgtttcattttaaagcatctgata
ctttgatactgaaaggactgataaaacaagattaatttttggaacttttt
tcaatcaaaaattaggaaccattaaaggaaaaaataaaatttgtaatttg
tactttaccttcactgttctcgagacttgacaaaattgataataatacct
tgaaggaagaaattttggcgggtggttgaaaaagttttttcagaggaatt
taatttgccggattgctagaaaaaagaaattaggcgagaatttaatttgg
cggttgaaggaaatttttggccaaaaatttttaccaaataagcaaaaacc
tgtttttaaggcctgaaatagcacaattggagaatacacgagataaatta
aatttggcgggaatttaatttgacgtatggcgggaatttaatttgacgta
tggcggaaaaaagaaactttggtggaaacttaatttggcagattcctggt
aaatccgtcaaattttatttccgtcataatttattcctttaaggtagtcc
ttgattACAATAGACCANgggtattttacataattcaatgtgttctaaat
aaataaataaattcttaatgaatgatgatatagtaacagaacaaaattca
ccaaaattagctatctccaaaattgaaagaattgcttcctcaccctgcct
caccataataagggcccctaataagttcttgccagaattaaaatttccag
tgattttcctaaggggTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNgccctttttttgcttgtaaaatt
gattgaaagagaataaaaagagaattattattcgcttgttccttacaaaa
tatcagctgtttctctctctcatagaaaaaggggaaaacccaagcctttt
gaatttgatttttttttcagccagggaggggtgtgaatgaaaaaagtacg
tactcaccaggggatatagctatttgcatctgcttgcctatagggggagg
ggtatatatatactcaatttttgacattttagtgcgtacgtaatatgtgg
acggcccctaagtAACCCCGAAGTTCTATttaaaacactaattttttagc
ataaaagaaccactttATAAACTGTGCTAtttgcccaaattagtttttgc
caaaattaaaaattgcatttctcttcaaaaccacatttataaaaaattct
attttatttagctccttGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAATTGTATTccccaaattcttattttttcgcaatttttgcct
cttgctgatttcaccattttatctccaattgtcccttttcgttaaataat
tgtttttcagcagcagtgaagtgaaagtaacaaacatcaagcattttcac
tcttaattgttgcacagtccataaagtgtccatcaatcttttctttctta
ttgtttaaaccagttaaacatcataacagtggccaaatgtttaaaattaa
cttcaactgACACTGATGACTGAGCAATGCATTTAGTTATTTAGCATCCT
GGAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTTTATAGCTCATGCTTACTCCAATCAGCCAATTAG
TCACAAAAGCAAGatgcaatgatgatgttgaggacatgatacttttcatg
tttttacacacaaaaacaaaatgttgttgtacaaaaatctgattgaattc
atcctACTGCTACTGTCACTGTCGTTCGTTTTTCCcagctgtggtgacat
gatatgggtggacaattggagtttacgttcttgaggctggatataaaaat
tctatcggcTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNaaaaaatatccatatcagagagccaaatttagaaaac
agtaattggaagttgagacttattgcaaggctactaatttattttgagcc
agtaaaaaaccattaaaaaacggaggaaagccattctctattccaaacaa
caaacacTGTCTTGCATTTCCCTTCCAAATGTCcaaatcaacattatttt
cttttcccatgccaaatggtcatactgagaaaaactatttacagcatttt
gatataaattattttagtaagtgtgctCGCAGCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNagtaccagggccctaaacgattcctccaattatacggta
ctggcctctttaagtcgcagaatcgtttatcggccctggctcgcgagggt
gcgccaaccgctgggggggggcctcATATATTGTTGTTATCGTGGGCTTT
AAAAGTatagttttttggttttgctgGTCTTAAAGATATGTTATTAAGAT
ATTAAAGTTACACTTGATAGATTGATTANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaat
tggaattttgttccttccagcctaattaggctacAATTTCTGGCTTAATT
AAGCCATCGTATCCAAGTTAGGCCAGAATCGGCGAACATAGCCTAATatg
caatagttcctgactggTCAAGAGAGGCTCTACCTTACaattcctgcatt
actaaaaatagacaaaaagaacgataaatttcataaaaaacgacaaaaag
aacgacaaatttttcagcattttgctgatttctgctgttgtcagcaaaat
ttgaagaaaaaaaattatgcaaaaatgttcctattattgatatgcaactt
ttgtctaaatttcatgtttataccataagccaaactggagttattcaaaa
aacaagttttgctgacgtcagcattttttggtttttgcctaatatctttt
tttgggtgaaaaatttaattatggcacagcttttccagtgatctacactc
gctccaatacgcttctttcgatgtatgaagtgatatgctatgacaagtgg
aaacggtgataaaaaatttatgtaaatttggacatgccttaatTTGCCCG
AGaatgtatatctgttctctagaaatattatgctcctggaaaaatataac
agctattcctttaagaaagttaaaatgcttctaaaaaatgagacctttta
agaaaatcatAAAGCTCCCGCCTGGAAAAAAATCTagcatctggttgtgt
ttttcacaactttactcctggattttttgaacagGTTGTtcgctggaaaa
ttgtatgtgtttttctttaaaatgtgctcctggattttaagaacagatgt
ctttaaggcgacccctggattttacctgggtgttttgaggaaagtctctc
ctgGATTTATCtataaaatttactctcctggaaaaaaagaacagatattt
caaaaaattctgccggcggctgctcttTTTGGgaatacaatcatggtcgt
aatatttgagaaaaaagggaaatccaccgggaagttttgaaaccacaatt
gatttgtaagtgctctaaagtaggtttgaagggtagagttttaactctga
gttttaacacttgacataagacttaggaccttcggatctcaggatctaaa
agttcaaaaatagtccaataaggctcagaatatagcctggaagtctgcca
acccctcccaaattgaaatattcgattaagttaaagagatagcccgaaat
cgactttctcgccagaactttaaatcttgaaaaacgttaaaataaccgga
attctcattctatttcgaccatgattgtagatatcTGTATCCCAGTTTAT
TATATCATCTCCCAGAAATATTGACCTTTCATATTGATTGTTTTAAGGAA
AAAGTCTTTTCTAGAAAATcagatctgtttccccattttttcaaaaaaaa
tcctctctcctggaaaagggaaacatatatttcggggaaatgggctcgtt
ggctgcttctgaaaaAGGGCCGACTAGGTATCTACAGTAAATTAGCAGAC
CTAGGTATCACATTTTCGAGCCTCCGTTGTCAGTGGCAAATATCCTGTCT
CCGAAATTCATCAAGTCTTTTTCGTTCTCTTTATAGGTCAAGAACAAGAT
GAGTTAAAGAACAAAAGAGATGATTGTTTTAGAAAGGTCTGTCGTCCATT
TATCTCACAATACTTGAAAGCAGTGCAAAACACTCAACCTGGTACACAGA
GGCAGCTGGTACACAGAGCAGCCGTcggcaaatttttttgaaatatctgt
tctttttttccaggagagtaaattttatggataaatctaggagaaacttt
cctcaaaacacccaggtaaaatccaggggtcgccttaaagacatctgttc
ttaaaatccaggagcacattttaaggaaaaacacaaacaattttccaaca
gacaatctgttcaaaagctccaggagctaaattgtgaaaaacacgcAACC
AGATGCCAgtttttttttccagggagcttcataattttcttaaaatgttt
cattttctaggagcattttaactttcttagagaatatagctgttatattt
ttccaagagcataatatttctttagaacagatatacattttccaggagtc
ccattttttcccagaacagatgatataatccaggagagcccaggataTAG
AACATCTGGTgtccggacaattccccccGGGTGAATCCCCCCCGGTTAAT
TCCCCCCAGTAAGTCCCCCCTAGTGAATTCCCCCCGAAAAATTcccaccc
ggtgaattcccccctggtgaattcccacccatatattttcatatgtgttt
taaatttcgaaatcATGGACTGTAACCCCAGGGGGGAGGGTACTAGGGTT
GACGAATGAGAGGAGCTATGTGcagacgggacctccgaaaaccgaccctt
agagagactgatttttgctgaaaagttgacccttagagagactttattac
aattttttctctggaaatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGTCAAGGATTTT
TACATGATAGTCTACAAGTTTTAAGAATCACAACGCccattttttttatt
ctgagaaaagaactgaaagatttttacatgATAGTAGTCTACACAGATTT
TTATAAGATAAATAGTAAAATCACTTATTTCaaattacatgattttttag
ttcaccaggtgggaattttccgggagggaattcaccaggggggaattgtc
cgggaatcagaacagatagttttttccaggagaaagggacctcaagaaca
gatattttatacttcctagccggtggctgctcttgagAGGCACCTGCACC
GCTTTTTGATTGTACTGATAGACGTTGTGAGCAactatcattaaaaaaaa
aaaaattgtcaccaACATAATCTCGAAAGCCAGTACGAGTCGTTGGCGGG
CGGGAGAGGTACGTTTctgcttttaaagtcaaaagcTAATATATCCGGGC
CATCAATTACAAAGTTTACGTTTCATtatgacctttatttaaaattgagt
tttaCTAGCTCGAATTCGAATACTGAAATCTGGGAGTAGGCAACGCGTAA
GGATCAAACTCATCCTCGTGTACGTTTATCTAAGGCTTGCGTTAATGATG
ATAGACACTAGAAAATATTATCTGttgctatcagtaagcataaaaaaact
GACATATACATAGGGAACGAGGTTGTGCCAAAATATGTAGTAGGTTGATT
GGTTTATGCCATAAATGGTAGCGTAATTTCTATTTCCTGACTTTCCTTAT
AGTGCATCATCGATAATTACAAATGCATTGTAAGCGGCCGCACGGACTGT
GGGCGACTTCAAATTGAATGTGCaagaaaatgtacaaaaataccCCCATC
AGGTAAAGTTCAATGTTATTGAATATTTTGGCAGAACGAGAGAAAAACAA
TTAATCTTATACATCTACAATCCCGGAATTTAAGAAAGATCCCCTCTCTT
CAATGTTGTTTTGGCGGTGCGTAAGTTGTGGTGATGACGTGTGACGATCA
CAGCAAGATTATTACAACATTGGGAGGGGGAATTCTGGCCATTTTAGAGA
ATTCTTacaattttgaaaagtctacaaccttttgtccgggaTTGTACCTA
CCTTGTGTAGCTAAAGGTGGTGAATTTAAGTGGAAAGAttgttttattca
aagtttaGAGAGGGCAATAAAATTCATGAGAAGTCTGAAGGTACCAGACG
TACCAGTGATCGAACTGAAGTCACAAATGCTCCGAAAACTCTTAAGAATG
AAACCACTCCTATGCAGTCCTACTTAGGTAATTACTTGTTGTAGAAAATG
GAGCTATTTTTTTGGACCAGGGCAGGGATACATGTGTATAAAATCTTGTT
GTTGCATTTGTAGTTTTTTCATCATAAtcgatttattttattttttaagg
taTGATGATCTAAATCAGAGCGACTTCAAAGGaaaagaaatgataaaaaa
caTTATGACTAAAATGTTTTAATCAAGAAAAAAGGATtaaaaaccatatt
atacgAGTCGTTTTTTTTGCCAATTGGATGAATGTCGCAGAAAtacacca
aaaatgaaaaatgtccAAAAGTTTTCAAGATCTCGTACGCCACACATGTC
AAAGTGAAAAGACCCGGTggagcctccccacttttgagcaaaatagACTT
TTTACAATCTGATTCCTGGCGAATtctatctcattttgagcctttagCCT
CTCTACATTTACGGTTGTTCAGCCGGGCCTGAAGTGGTGAAAAAGTTTAC
ATCTTCTATACTAAATTTGAGCTAAATCGAGAATTCCCGAGGCCATTACA
TGCACTTATCCGCCAATCTTGGCGAGATTTGAGAAAGTCTACAAAAATTG
GGTCGCGCCAAAAAAGAATAAGAGCAAATTTTTAGCCTTAAGAAAATAAG
GCATATAATCGATTCTGCTTCTCTGGaccccagggggggggtacttaggc
aaatggagggtacggtatgtgccgcccttcttttttggacttccaaaatc
ccgctaagggtcggaaaaatcagaaaatcaaatttcagtcccagtaaggg
tcggaaaaataggaaaatttcaactttttaccccctgaaagatcaaaatT
TGGTCAAAATTGGTCAAATTAGTCCCGCTAAGGATCGTAAAATTCCCAAA
ATtttcctttgttttcttctttttagtcccggtaagggtccaaaatt

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_039695	XLOC_039695	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00063346-exon-scaffold_386-1491911889:27433..28964	TCONS_00063346-exon-scaffold_386-1491911889:27433..28964	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1510915933:27433..28964	TCONS_00063346-exon-scaffold_386-1510915933:27433..28964	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1575043694:27433..28964	TCONS_00063346-exon-scaffold_386-1575043694:27433..28964	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1491911889:44319..44368	TCONS_00063346-exon-scaffold_386-1491911889:44319..44368	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1510915933:44319..44368	TCONS_00063346-exon-scaffold_386-1510915933:44319..44368	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1575043694:44319..44368	TCONS_00063346-exon-scaffold_386-1575043694:44319..44368	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1491911889:46185..46284	TCONS_00063346-exon-scaffold_386-1491911889:46185..46284	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1510915933:46185..46284	TCONS_00063346-exon-scaffold_386-1510915933:46185..46284	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1575043694:46185..46284	TCONS_00063346-exon-scaffold_386-1575043694:46185..46284	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1491911889:46832..47629	TCONS_00063346-exon-scaffold_386-1491911889:46832..47629	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1510915933:46832..47629	TCONS_00063346-exon-scaffold_386-1510915933:46832..47629	Clytia hemisphaerica	exon
TCONS_00063346-exon-scaffold_386-1575043694:46832..47629	TCONS_00063346-exon-scaffold_386-1575043694:46832..47629	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_386	supercontig	scaffold_386:27433..47629 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.64376	4.90911	2.77534	1.79284	2.35885	2.56171	1.9426	1.56537	0.733295	0.685694	0.821401	0.635453	0.482184	0.589547	0.860635	1.00183	1.17627	1.23304	0.808623	0.828919	1.50932	1.66344	8.04187	6.35117	0.457205	1.13401	1.79575	1.60255	4.4376	5.69118

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	L_dom-like

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00063346 vs. Swiss-Prot (Human)

BLAST of TCONS_00063346 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00063346 (transcript) - C. hemisphaerica