TCONS_00063534 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063534
Unique NameTCONS_00063534
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length609

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063534 ID=TCONS_00063534|Name=TCONS_00063534|organism=Clytia hemisphaerica|type=transcript|length=609bp
GCTGATTTTCCTTATTCTTTTCTAAGGCGGACATCATCTTAATTGTTGGA
TGTGGTGACCAAGACCCAGCTGTTGGAAAGtTGGAATCACAGCTGGAGAA
TATGACGACCATCCGTGCGCAGAAAGATCTTATTCTTTTGTACAACGACG
AAACATTCAAACAACCTACCGAAACAATCGATTGGTTAAATGCCAGACGT
TGGATTTCTGCGCATCATCACGTTCGATGCCCAAGAAGAGTCTTCAAAAG
AAAACTATTGTCAGCCCGTTACCATGACGACCCAAACTATGAGGGACCAG
ATAGGATGTCAGATTTTGCTCGATTGGCTCGTGTGTTGACTGGAACGGCA
GTTGGCCTTGTCTTGGGTGGCGGAGGTGCCAGaGGTATTTCACATGTTGG
TATCATCAAAAGAATGTTAGAAGCAGGAATACCGATTGACCGTGTGGGAG
GTACGAGCATGGGTGCCTTTATTGGTGCTATTTATGCAGAGCATGGATCT
ATTGTGAGAACCACTCAACGTGCCAGAGAGGGCTGTTTGAAAATGGCATC
AATGTGGAGGAAACTGCTCGATATGACTTACCCTTACACCTCGCTTTTTA
CCGGTAAGT
Run BLAST on NCBI

transcript from alignment at scaffold_392:81993..90838-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063534 ID=TCONS_00063534|Name=TCONS_00063534|organism=Clytia hemisphaerica|type=transcript|length=8846bp|location=Sequence derived from alignment at scaffold_392:81993..90838- (Clytia hemisphaerica)
GCTGATTTTCCTTATTCTTTTCTAAGGCGGACATCATCTTAATTGTTGGA
TGTGGTGACCAAGACCCAGCTGTTGGAAAGGTTTATTCTTATTTGAGTCT
TCCATTCTTTCTAACGTAATCTGAAGTTGGCTTTTTCTACTGGTCGCCTT
CAAAAAGAAAACGTTTGTCGACATTATTATGGGCTTTTCAAATTCAATTC
TACGAATCAAAATTTTAGCCTCATGAAGAAATTTGTCATAGCTATGTGAA
TATGTAATTCCCAGAAGTCATAATTTGGCTTGGCAAATGGCGAATTCCGC
CGGTCGAAGAACTCGAAACGAAACTTGAACTCACCGGTATCCTCTATTCG
CTGGCTGATGAAATCTCCTGTAATCAACTCTTTTAAATGGGTTTATACAG
TTAGATTAAGTGCGTTTATAAACTTTGTTTCGAATCATGAATTCTGAAAA
ATTGCCTGCGTCGCTTGACTTTTTCGAAATAAAGTATAAACTTTATATAC
ATTTACTTTTCTATTGTTTGCAGAGTTTACCATACTCCTCAGTACTCATT
TGTAATTTTCTGTATTTTCACTTTCTTATCCCGTTTTTCTAATGAGGAAA
ATAACAGACTTGATGCACAATTATTTTCTGCTAAAATATTAAAGCACACA
AATACACTCAATCATAGAGTGCACAAGCGTCCATCCCGTAGAAATTTTCG
GGGGAAGGGCTAATAAAAATAGCTCCAGCTAAATTTCAAGAATGAAGCCC
CCCCCCCGCCTCCCCGAAACGGAAAATTGTGCTTAAAAGTGGCAAAAGCC
AAAGTGATGCATACTTACNCACTTTTCTGTTGTTTGCAGAGTTTACCATA
CTCCTCAGTACTCATTTGTAATTTTCTGTATTTTCACTTTGCTTATCCCG
TTTTTCTAATGAGGAAAATAACTATTTTCTGCTAAAGTATTAAAGCACAC
AAATACACTCAATCATAGAGTGCACAAGCGTCCATCCCGTAGAAATTTTC
GGGGGAAGGGCTAATAAAAATAGCTCCAGCTAAATTTCAAGAATGAAGCC
CCCCCCCCGCCTCCCCGAAACGGAAAATTGTGCTTAAAAGTGGCAAAAGC
CAAAGTGATGCATACTTACTTAGAATACTTAGAAGTGTTCGACGCTCTGT
GGCTTCCACGCATCTCGTCGAGACCATTGGCATGTGGCCGATACTGTTTG
ATTCAGCACGCCTCAAGATTTTGTAGCCTGAAACAAGAGGTTAATTCGAA
ACAGTACGCAAATAACGATCTGCATTAAAGTTGTTTTTTTTACATTTTGT
AAGATTCCTCCAATCTTTGGGTAAGGAATTGAACAATTTTGGTCGCTACT
TACGAGGTGTTGAAAGGGGCTTCTCTTTATCAGGGGAATTAAACACTTCC
TTCCTTGTCTAAATTAGAAATCGGTAAAATAGATTTTTCAAAATATTTGA
AATTTTTGAATTATCTGCTAAGCCCCCAGTTCAATTACTCTATTCTCTAA
ACATAGCCCCCTTATCGAGGCAGCTCCAAGAATTATCAAACGCGAAAATA
ATAATTAGCTCCCGCTAAGCTCAGGGGGGTGCATACTAGTCAGATGTTGA
TGGTTGCGTACGAGAGAAACTATTTTCGCGTTTGATAATTTCTCAAGAAA
ATATGCTATAATAACCACTTTTACAAAAGTACCCTTTTTGACTTCTTCAT
AAACCTATACATTTCTCTGGTATGTCTATCTTCCGACGCCACTCCACGAG
ATTGAATCGATTTCCCATTCTATCGCACCTCTTCCTAATTCTTCCGTCTC
AGACGCTTGTCCATCTCATTGATGCTTAAAAAGACTCCTTTTGTCTGAAA
GACTTGAAAGAAAATGTTAAATATTAGGGATTATTTGTTTTGAGAAGTCT
AATTTCTGTCCGAGAAGAAAAGCTAAAGGAGTGAATCTAAGTGAATTTTT
TGTTTTGATTTATAGTTGGAATCACAGCTGGAGAATATGACGACCATCCG
TGCGCAGAAAGATCTTATTCTTTTGTACAACGACGAAACATTCAAACAAC
CTACCGAAACAATCGATTGGTTAAATGCCAGACGTTGGATTTCTGCGCAT
CATCACGTATTTGTTCTTCTCTCTTTTTACCCTCCATATAATTGAATGAT
AAGTCGCATTAACATCCTTTATTCGGGTAATGTCGTATTTGCTACAATCC
GTGCCATAATATATTTGCACTTTTGGCTAATCTACCATTTTTCGAAAATT
GAAGTTCGAGCGAGAATGTCAATTTTAGGCCCTCAACTTGATTTCATCGA
TTATTTCGATCTGGGAGGGATTTATTGGTTNTAGTTTTCTAAGTTTATAA
TTAATTCCCAATCGACTTTAGCAAAGATCTGCTACGTTGTAACAAAAATC
TTGTCGATTATTCAAATTTTGTGTATTTGACCAAATTAAAATGATTGAGC
CACTCACTTACTTGTGATACTTCTCATTTGATCGCAGGATGTCAGATTTT
GCTCGATTGGCTCGTGTGTTGACTGGAACGGCAGTTGGCCTTGTCTTGGG
TGGCGGAGGTGCCAGGTAGAGTNGTCTACCCTTCGAACCTACTTTAGAGC
ACTTACAAATCGATTGTGGTTTTGTGCCAAGTATTTTGTCCCTGATTGTA
CCTTTAGGGGTTTGAGACATTAAGAAAAAATGAGATGTATCGAAAAGTTA
CTTTGTATTCCGTTTTAGGTTCGATGCCCAAGAAGAGTCTTCAAAAGAAA
ACTATTGTCAGCCCGTGTAAGTGATCCATTATTCGATTGAAAATCATAAC
TCGAATGTTCTTTGAGCTTTCTTTTGTTTGAGTGATTTCTTATTTTCTTC
ATCTTTACTATATTTTAGTACCATGACGACCCAAACTATGAGGGACCAGA
TAGGTATAATTTTTATCGCACTTAGATTTAAAGAAAGATGATCTTTGAAG
TTTTTTCTTCGTTTCTAGTTTTCTAAGTTTATAATTAATTCCCAATCGAC
TTTAGCAAAGATCTGCTACGTTGTAACAAAAATCTTGTCGATTATTCAAA
TTTTGTGTATTTGACCAAATTAAAATGATTGAGCCACTCACTTACTTGTG
ATACTTCTCATTTGATCGCAGGATGTCAGATTTTGCTCGATTGGCTCGTG
TGTTGACTGGAACGGCAGTTGGCCTTGTCTTGGGTGGCGGAGGTGCCAGG
TAGAGTTGAACCTTGTAATCAACTGATTTCTTTCAAAAAAGCCAAAAAAA
GCTGAGGGTTAAACCTCAAACCTTCAACGTATGCCTACTATATACTTAAA
TGAATTTGAATTTTTCAGAAAACTTAGAAATAGTTAATGCATTTTTTCGA
GAATACTTCTGACACTCCGTTCAAATTCAAAAAACTCCCTAATCGTCCCA
ATATAAACTTCATAAAAACTTTCCAGCATAACATCCGAGGGTAGTATTTT
TGTCAACAAAATATGTACGTTGCAATACCTGTTTATTTGACAAAGAACCC
CTGTTTTGCCTAAACTTGTTACCCCTTCGTATATTACCCCTTCCATAATA
TAGGCGGGAGTGCTAACTTCATCGGAAAGTTTGAAACTTATTTAAAGTTG
AGCAGATTTCTCTACAGCTTGCTCTTTAGGAAATACCCACTGCCATTTTG
AAATAATAACTGTCCGCTTCATTTTCTTTTGTTACAGAGGTATTTCACAT
GTTGGTATCATCAAAAGAATGTTAGAAGCAGGTCAGTACCTACGTTATCT
CTTCCTTTGCAAAGGCTACCTTTGGTAACCTTTCACCTAAAATTTTTGAA
TATTTTCTGTCAGTCCGTAGCGCCGGACGCTATTTACAGAAAAAAAAGAT
TCCCAATACATTAATTGGTTTCCTTTCTGAATATCGGGGAAATGTAGCGT
GATTTTTTGTTTTATTTAACTAATTTTCATGGTGTCGGCTTTTGAAACTA
AATAAACCAGCTGCGCTGGAAGGTCGCCTAAATGGAATAGCTTTTTAAAG
AGCTTAAAAGTTTGAAAAAAGTATACGACAAAAAGCTTAACAGTGTAACA
CGTGATTTGCGAATGTGAAAAATCTCGCATTAATGTCAAAATGACTGAAG
TTGATTTTAAGTTAATGTTAGAAAAGATAAAATGAGATTGGAATCAACCT
GAAAAATATTCTTCAGAAACAAATACGTAATATAATATTATTTTTGTCAT
CCCTAAAATCTTAAAAGTTTTCAGAAAGTTATCATTTTTTAAAAGTGACA
TTAGGGATATAGGTGAAAATAGCCTAAATTTTTTCTGAAGAGATAAAAAA
ACCGTTCGAGTTAAGGACACATTCAAGTTATAGGGTTTGAGTTTGAAGAC
GGTTACTTAATCATATCATGTTTAACTTATATCAATGAATGTTTCTTGTT
TGTACAATAAAAAATTGTTGCTAGAAAGTTTTAATAAATTATTATAGTAA
ATCTAATAATACAGTTGAAGTAATCTTTTAACAAAAGTAAAAAATTTGGA
GGGGATTTAATATGGCTGCGAGCTTGAAAAATTAAATTTGACGGGAATTT
ATTTGCCTTAAAATAGATAACATTTGGGGGGAGAAAACAATAATCTAAAT
TTGGCGTCGAATGGCAGTAAAAGTTACATTTGGATGATTTTGGCCCAATC
CACCAAATTAAATTCCCGCTAAATTTAATTTTCAAGTTAACCACCAAATT
AAAAGGACCCTCCAGGCACACTGGAAACTTCCGGAGTTTTACAGACCAGC
TAAAAAAACACTATTTTTATCTCTGGAAAGCTTAGGAGCTCTTCCCGGCT
GGAGCAAAGTGATTCTTAACACAGCTCCAGAGTTCCGGTGTAGATCAATT
GCCGAAATACGAGAAAAACGGCACTTTTTGCTCCGGACGTTTCTGGAGCG
TCGGGAGGGTCCTAAATTAAATTCCCTTTGAAAAAACTTTTTCGGCCATC
CGCCAAATTAAATTCCCACCAAAATTTCTCCTTTTAATGTAGGTGCAATG
TCACATTGTGTAATTAAAACTCCAGCAAATATCTTGATAACTCCATGTTT
CAATGGATGCAAGGAGAACAACAATAATAATCAAAAGGGCCATTCCAGAG
AAAGGATACGTAACGTCACTCTCATTTTTACTAGATGCCAGTGGGGAGAC
AGTTGTTCAGCCGGGCATAAACTCCAATAATTGCAGTTGACAACTGGACA
ATATCTTGAAATGGCCCAAAAAGGAGCCTGAAATAAAAGAAATAAACTGG
CTGCCAAACAGCCGACAGTTGTATGTTTGTTCAAGAAATTTTAAGTCAAT
ACTTGCAATGGTTACACAAAATTACTCGTCTTGGAACGGTGAATCATCAA
TCAAATCTTGCTTAAGCGTTTAGGTGATATATAAATGTTCTTTTGCTTCA
CTTCAAATCTGCTAATTGTAGCTAAGAAATTCATGGTATGCAATTGATAC
ATTGGTTAGGTTGCCATATGCAGTGAGTGATCTTGGTTGGGACATGCTAT
CAACTGTTATCATAGATTTCGAGTAATTGAAACAATAATAAACTTATTCT
TATCTAATCTATCTTATTTTTCTTGTCAACACAAACACATCCATCTTCCA
AAACCAAATGTTTAAACCTCAAAAGTGATTCTAGTGAAAGGAGGTTTGTT
TTCAACAACATCACGAGTGTGGTAGTTTGAATGGAATAATATCAATGAAG
AACTATAAATTTCAATTTCAATTTTGAAGAATCATTATTGTAGTTGTAGA
TTTAAAATCTACATCAAGAATTATCTGCTGCTTGCACTTGTAGTAGAAAC
TTTCGACAACTTTCACGAGGCTTTTAATTATCTCCGTTATTTAGATTTCA
TAAAACAAGTGTGCTAACTACTACGGAGCTAATTAGAATCTACACACTGC
AAATACTGTCTGATAAGTTTGCGTGGCGCAATATAACAGAGATAAAACGG
CTTATGCAAGAATTTACGCGGGAAATAATTTCCCGATTTACCGAACATTT
ACCGAATCGGGCGACCAAACTTTCACAAAAGAGTCGTATGGAGAAAACAC
CGAATTTAAAGGTCTCCTTCACTTGCGTGAGGCGACCAAAAAATGTAAAG
GGAAATCTGTATTTACACTTGTCTATCAAAGGTAACGAATTGCTCAATCG
ATTAATAATCAATTTTATCGGCGATCCAAAAAATATCAGTAATCTGATTG
GTTAAAAAGAGTACAATATATCTTGTATTTTACATGTAAAAATATAAATT
GACGAAAAGATGTTGTTGCATTGTAGCGGTAGCAGCAATCTAACGTCACT
TTTCTACAAGAGTGCCCAGCGCTTTTTTCCAACAAGAAATTATATTATAT
TATATTATATTATATTAGAGTTGTCATGCAGCAAAGGAAGGAATGAGCAA
ATGAAAGTGGATGCTTAAAGGGCATCATCTCCTAACATTGCTTACACAGC
AACTTTTGTTCTCTTTTTTCCGCGCCCATGCGAGTGCAAAAAAAAATTAG
AAATTCTACTGTTAATTCCGCCGTGTCACCATTAAGGCACGTTCTTTCTA
TATCACCAAAAGAAATATCTATTAAAGGTCCTCTTTTACTCTAAAAGCTT
TAAATGTTTTTGTGGATGAGTACTTAATGTATTAATTAATCCCATCTCTG
AATCCCAGTCAAGAAACTTTAAAGGTTTCATTATTTGATTAAGTGGCCAG
GGGATAGCTTAAGATATGAAATGCATTTAAAAGTTTTTTCAGTTACTTGA
TTTTGATTTAGCCCGCCCTTTTTGGCTAGCTTCTCTGTTATGGGCTATTG
TACAATTTTTGGACCTACCTAAGGTAGTCCTTTAAATTAACCCTTGTCCG
TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTCTGTTACCAGCTT
TTCTCGGGATCAGCTCATTAGTTTTTTCTAATTTTTTGCACAATGATGCA
AAATGGCAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAAAAT
TTTTCCGGCCGAAAATTGCGGAAATATGCCGAAAAAACTGATTTTTCGGC
ATTTTCTCGAGATTTCATCATTAGTTTTTTCAGATTTTTTGCTCAAAGAT
GCGTATTAACAATGCCCAAAACATGGCCTAGTCCGATTCTTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAGAAAAAATTTTTTCCGGCCGAAAATGCCGGAAATCGCCG
TTTTTCTGGATTTTCATTGGACTTTTTCCATATAATTGGTTGTTTTTCAT
TCAAAAACATTATCAATAGCAATGCCCACCATCAAGCATGTTTCAATTTT
CAATAAAATTGATTTTTGAAGCCGGAACTTTCTAAAAATCGCTGGAACAG
CCGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT
CGCCGGAAAAACTGTATTTCTTGAATTTCTTGAGCTGTACTTTATATTTT
TTCATGAAATTTTGCACACTGATGCAAAATGTCAATACCTAAATTGTGAT
CGAGCCCGATTTTCGAAAATAATTCAATTTCGGCTGAAAATGCCTGAAAT
ATGCCGGAAAAACTGGTTATTTGGCATTTTCTCGAGATTTTATCATTAGT
TTTTGCTGATTTTTTGCTCAAAGATGCGTATTTGCAATGCTCAAAACATG
GCCGAGTTCGATTTTTGAGAAATTGCAGATTTTCATTGGATTTTTTCCTT
GTATTTCTATGTTTTTCACACAAAAACATTATTGATAACAATGCTCACCA
TCAAGCATGATTTAATTGTCAATAAAACTGATTTTTGCAACCACAACTTC
CTATTTATCATTTCCCTACAACCCTTCCCTCTCCCCCCATCAACAATCAA
TGATGAATTTATTGCGTTGTGTATTTTCGCTAAACGCTATATTTTCTGAC
TGATTTTTTTCATTTTTCTTTTCGCATTGCTTTCTAACTTTCATCATCAG
GTAGGTCCATTCAGCGTGTTGCTTGTTAATCCTTCAATTGAAAATCCTTC
AACTATTAAACCCTTTCAACATCGTAACTGACTTCCCATTCTCGGTTAGG
TTTACTTTTATTTCGATTGCGCTTAAAAATCTCAACTGAATTTTTTAATG
ATAATTGGTCTTTCTACTTTGTGTTTAAGGTCCCACTATGATTGGCAGTA
GAACGACAACAAGTTGTTATTTTTTAATAAAGTTTGAATTAGAATCCGAT
TTTTTGAGTAGAGTCACAATCAAAAAGAAAAATTGAAAAAAATGGGAAGA
TCAATTACTTTCAACATTGTGCTATAATTTCCTTTTTCTCTGTTCACGTT
CAGGANAGATCAATTACTTTCAAGATTGTGCTATAATTTCCTTTTTCTCT
GTTCACGTTCAGGAATACCGATTGACCGTGTGGGAGGTACGAGCATGGGT
GCCTTTATTGGTGCTATTTATGCAGAGCATGGATCTATTGTGAGAACCAC
TCAACGTGCCAGAGAGGGCTGTTTGGTAAGCTTTTTTTATACCGTTACTT
TTAACCACCTGGGAAGCTAGCTTTCTCTTTCTTCTGATGTCACCTTTTTT
TTTATCATTTTGCATTGTGTTTTCAGAAAATGGCATCAATGTGGAGGAAA
CTGCTCGATATGACTTACCCTTACACCTCGCTTTTTACCGGTAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039826XLOC_039826Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063534-exon-scaffold_392-1575043694:90759..90838TCONS_00063534-exon-scaffold_392-1575043694:90759..90838Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1575043694:88733..88873TCONS_00063534-exon-scaffold_392-1575043694:88733..88873Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1575043694:88073..88120TCONS_00063534-exon-scaffold_392-1575043694:88073..88120Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1575043694:87936..87970TCONS_00063534-exon-scaffold_392-1575043694:87936..87970Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1575043694:87640..87717TCONS_00063534-exon-scaffold_392-1575043694:87640..87717Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1575043694:87108..87151TCONS_00063534-exon-scaffold_392-1575043694:87108..87151Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1575043694:82164..82276TCONS_00063534-exon-scaffold_392-1575043694:82164..82276Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1575043694:81993..82062TCONS_00063534-exon-scaffold_392-1575043694:81993..82062Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:90759..90838TCONS_00063534-exon-scaffold_392-1510915933:90759..90838Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:88733..88873TCONS_00063534-exon-scaffold_392-1510915933:88733..88873Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:88073..88120TCONS_00063534-exon-scaffold_392-1510915933:88073..88120Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:87936..87970TCONS_00063534-exon-scaffold_392-1510915933:87936..87970Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:87640..87717TCONS_00063534-exon-scaffold_392-1510915933:87640..87717Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:87108..87151TCONS_00063534-exon-scaffold_392-1510915933:87108..87151Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:82164..82276TCONS_00063534-exon-scaffold_392-1510915933:82164..82276Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1510915933:81993..82062TCONS_00063534-exon-scaffold_392-1510915933:81993..82062Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:90759..90838TCONS_00063534-exon-scaffold_392-1491911889:90759..90838Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:88733..88873TCONS_00063534-exon-scaffold_392-1491911889:88733..88873Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:88073..88120TCONS_00063534-exon-scaffold_392-1491911889:88073..88120Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:87936..87970TCONS_00063534-exon-scaffold_392-1491911889:87936..87970Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:87640..87717TCONS_00063534-exon-scaffold_392-1491911889:87640..87717Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:87108..87151TCONS_00063534-exon-scaffold_392-1491911889:87108..87151Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:82164..82276TCONS_00063534-exon-scaffold_392-1491911889:82164..82276Clytia hemisphaericaexon
TCONS_00063534-exon-scaffold_392-1491911889:81993..82062TCONS_00063534-exon-scaffold_392-1491911889:81993..82062Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_392supercontigscaffold_392:81993..90838 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.312	8.66785	5.05035	0.87882	19.9917	16.3542	17.5044	24.6619	10.3565	14.1978	14.0841	9.78467	10.3023	15.8114	7.29352	18.5556	20.4661	11.6584	6.07893	15.0972	16.1228	15.3343	10.8089	14.3973	36.9724	36.5261	9.64489	11.9744	15.3128	10.1065
Blast
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BLAST of TCONS_00063534 vs. Swiss-Prot (Human)
Match: PLPL6 (Neuropathy target esterase OS=Homo sapiens GN=PNPLA6 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 3.466e-51
Identity = 112/200 (56.00%), Postives = 142/200 (71.00%), Query Frame = 3 
Query:   24 KADIILIVGCGDQDPAVGKLESQLENMTTIRAQKDLILLYNDETFKQPTETIDWLNARRWISAHHHVRCPRRVFKRKLLSARYHDDPNYEG-----PDRMSDFARLAXXXXXXXXXXXXXXXXXXXISHVGIIKRMLEAGIPIDRVGGTSMGAFIGAIYAEHGSIVRTTQRAREGCLKMASMWRKLLDMTYPYTSLFTGK 608
            +AD ILIVG GDQ+P +G+LE  LEN T +RA K L+LL+ +E    PT T++WLN R W S H H+RCPRR+F R+   A+ H+   YE       DR SDF+RLARVLTG  + LVLGGGGARG SH+G++K + EAG+P+D VGGTS+G+FIGA+YAE  S  RT QRARE    M S+   +LD+TYP TS+FTG 
Sbjct:  861 QADCILIVGLGDQEPTLGQLEQMLEN-TAVRALKQLVLLHREEG-AGPTRTVEWLNMRSWCSGHLHLRCPRRLFSRRS-PAKLHE--LYEKVFSRRADRHSDFSRLARVLTGNTIALVLGGGGARGCSHIGVLKALEEAGVPVDLVGGTSIGSFIGALYAEERSASRTKQRAREWAKSMTSVLEPVLDLTYPVTSMFTGS 1055
The following BLAST results are available for this feature:
BLAST of TCONS_00063534 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLPL63.466e-5156.00Neuropathy target esterase OS=Homo sapiens GN=PNPL... [more]
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