TCONS_00063724 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063724
Unique NameTCONS_00063724
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length251

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063724 ID=TCONS_00063724|Name=TCONS_00063724|organism=Clytia hemisphaerica|type=transcript|length=251bp
AAAATACTGACTTTTGACGTCGAGGCAGATGTGCGCACTATTTCGCCCGC
GCGTGCAGAGAGCGTTAAAATAGAAGGTAGCCGTTTTTTGTGTAAACAAA
CTAATTATTTTGGGATCTACAGGCAAATTGTACCATCTGCCTAGACGTAA
ATCGATCAGCCTTTATATAAGCTTTCAAGATAAACCATAAAACTTATATG
TGTCAGGCAGAGCAATTGACGCAAAAGTtgaaaaaccttcaaaaatacGG
G
Run BLAST on NCBI

transcript from alignment at scaffold_399:67939..68189

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063724 ID=TCONS_00063724|Name=TCONS_00063724|organism=Clytia hemisphaerica|type=transcript|length=251bp|location=Sequence derived from alignment at scaffold_399:67939..68189 (Clytia hemisphaerica)
CCCgtatttttgaaggtttttcaACTTTTGCGTCAATTGCTCTGCCTGAC
ACATATAAGTTTTATGGTTTATCTTGAAAGCTTATATAAAGGCTGATCGA
TTTACGTCTAGGCAGATGGTACAATTTGCCTGTAGATCCCAAAATAATTA
GTTTGTTTACACAAAAAACGGCTACCTTCTATTTTAACGCTCTCTGCACG
CGCGGGCGAAATAGTGCGCACATCTGCCTCGACGTCAAAAGTCAGTATTT
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039947XLOC_039947Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063724-exon-scaffold_399-1491911889:67939..68189TCONS_00063724-exon-scaffold_399-1491911889:67939..68189Clytia hemisphaericaexon
TCONS_00063724-exon-scaffold_399-1510915933:67939..68189TCONS_00063724-exon-scaffold_399-1510915933:67939..68189Clytia hemisphaericaexon
TCONS_00063724-exon-scaffold_399-1575043694:67939..68189TCONS_00063724-exon-scaffold_399-1575043694:67939..68189Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_399supercontigscaffold_399:67939..68189 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.50922	4.24198	1.40057	0	5.57141	0	4.12525	5.11096	1.23004	2.4725	2.29724	2.91237	0	7.01822	1.37578	1.90253	3.21292	0.79608	1.1405	0	4.18889	2.38011	1.22312	0.971251	3.83014	1.44615	4.44815	4.84529	1.72213	2.75743
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063724 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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