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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063813 ID=TCONS_00063813|Name=TCONS_00063813|organism=Clytia hemisphaerica|type=transcript|length=1060bp
acggaaaccaccttagcccagtcgtttattttaaccatatcccgacataa
aaatttcccgctttcaacaaaaacgttataaacgactggattcccagtct
aagcttttttataataaaataatttcttttaaaaaaacgcTATTTACAAT
TTTGCAACCATAAAACAGTAAATTTTACACAATGAACAAATGAGTGgacc
aaaaaaataaataattggaCACATAAAAATTTCATTCAACCTAGATATTT
ATACtcgataaaaaataatcaaaattttggattAAATATTTTCCCCTAAA
ACTCCATATATTTATAGACAATATTAATAAATGTTAAATAATTCCACCTA
ATAATTCTACTATTTCTATCATATTTTGGAATGAAAGGGACTCCACTATG
AATAGCCAGAAATAAACAATATAATTGGGTTAGGAATAACTTATAAATCG
AGTTTAAAACTCTTGGATGTGAAAGAAAGTCACCTATTTCCTGCATGGTT
TTCACAAAAACGCCTGCGTGAGAGAAAAATCTATCACCAGATTTCGAGAA
GAAAGCGCTAATTTAGTCTGTCATTCTAAAAGCGGCGCCAATCTTAAGGC
TGCACTTTCCTTGCAGgagaaagattgaagaatcatcCTCTATAAACCTT
CGGTCTTCAAACTTAATGCTTTATTCGTTTAACATATATCACCTAACTAT
TTTGTACACTCGAAATCTATGAGATTTTATGTCAGACAGCATTTTACTCT
TGTGTACCCTATTGTACCCTTGTGTACTCTTGTGGACTCGGGATCAACCC
CCTTCCATGCAGTTCTTTATACAATGTTAACGATTAGTAACTGGGTTTCG
ATCCTTGGGTTTTGGGTTTCCAGCATCCGAGGAGAAACTTAGTTCTTCTT
GGCTCCTTCTTTGTTCTTCTTGGGTAGAAAGAGAGCGTTAAGGTTTGGCT
GAGAAATAGAATAATCGTTTTAGTGAAAAAACGGGAAAAATCGACGGTGC
AGTAAGTGTACTCattatattcatgacgtaatgttttctatggaaaCACC
CCGATTTTTG Run BLAST on NCBI transcript from alignment at scaffold_400:147715..148774 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063813 ID=TCONS_00063813|Name=TCONS_00063813|organism=Clytia hemisphaerica|type=transcript|length=1060bp|location=Sequence derived from alignment at scaffold_400:147715..148774 (Clytia hemisphaerica)
CAAAAATCGGGGTGtttccatagaaaacattacgtcatgaatataatGAG
TACACTTACTGCACCGTCGATTTTTCCCGTTTTTTCACTAAAACGATTAT
TCTATTTCTCAGCCAAACCTTAACGCTCTCTTTCTACCCAAGAAGAACAA
AGAAGGAGCCAAGAAGAACTAAGTTTCTCCTCGGATGCTGGAAACCCAAA
ACCCAAGGATCGAAACCCAGTTACTAATCGTTAACATTGTATAAAGAACT
GCATGGAAGGGGGTTGATCCCGAGTCCACAAGAGTACACAAGGGTACAAT
AGGGTACACAAGAGTAAAATGCTGTCTGACATAAAATCTCATAGATTTCG
AGTGTACAAAATAGTTAGGTGATATATGTTAAACGAATAAAGCATTAAGT
TTGAAGACCGAAGGTTTATAGAGgatgattcttcaatctttctcCTGCAA
GGAAAGTGCAGCCTTAAGATTGGCGCCGCTTTTAGAATGACAGACTAAAT
TAGCGCTTTCTTCTCGAAATCTGGTGATAGATTTTTCTCTCACGCAGGCG
TTTTTGTGAAAACCATGCAGGAAATAGGTGACTTTCTTTCACATCCAAGA
GTTTTAAACTCGATTTATAAGTTATTCCTAACCCAATTATATTGTTTATT
TCTGGCTATTCATAGTGGAGTCCCTTTCATTCCAAAATATGATAGAAATA
GTAGAATTATTAGGTGGAATTATTTAACATTTATTAATATTGTCTATAAA
TATATGGAGTTTTAGGGGAAAATATTTaatccaaaattttgattattttt
tatcgaGTATAAATATCTAGGTTGAATGAAATTTTTATGTGtccaattat
ttatttttttggtcCACTCATTTGTTCATTGTGTAAAATTTACTGTTTTA
TGGTTGCAAAATTGTAAATAgcgtttttttaaaagaaattattttattat
aaaaaagcttagactgggaatccagtcgtttataacgtttttgttgaaag
cgggaaatttttatgtcgggatatggttaaaataaacgactgggctaagg
tggtttccgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063813-exon-scaffold_400-1491911889:147715..148774 | TCONS_00063813-exon-scaffold_400-1491911889:147715..148774 | Clytia hemisphaerica | exon |
| TCONS_00063813-exon-scaffold_400-1510915933:147715..148774 | TCONS_00063813-exon-scaffold_400-1510915933:147715..148774 | Clytia hemisphaerica | exon |
| TCONS_00063813-exon-scaffold_400-1575043694:147715..148774 | TCONS_00063813-exon-scaffold_400-1575043694:147715..148774 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_400 | supercontig | scaffold_400:147715..148774 . |
Blast
The following BLAST results are available for this feature:
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