TCONS_00063875 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063875
Unique NameTCONS_00063875
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1937

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063875 ID=TCONS_00063875|Name=TCONS_00063875|organism=Clytia hemisphaerica|type=transcript|length=1937bp
ACCTTATCTGGTGCTTGTATTGAAACAAAAGCCTTGGATGAGCTTTTTTC
TGACTGGAAAGAACGTGATGCTCCACTTCATACTGAAGTTACTGGTGATA
AAATGTATTATTTGACGGAAAGCAAAGGGATCAATATTCCAGTTTTTAAA
GGTTTGCCAATGTACAACCATGGCAATTATTTAGTACGTCTTGGAAATTT
TGTTCAATGGCTTGGTGAACAAGCTGAACAAATGGATGTTGAAATTTACC
CTGGTATCGCTGCTAGTGAgGTTTTGTACCATGAAGACGGAAGTGTCAAA
GGGATTGCAACTGCAGATGTTGGTATTGCTAGAGATGGTTCACCTAAGGA
TACTTTTGAAAGAGGTATGGAACTTCACGCCAAGGTCACCGTATTTGCAG
AAGGATGTCATGGTCATTTGGCGAAACAAATCTTCAACAAGTTCAATTTA
CGTGAGAATTCTTGCCAACAAACCTATGGCATAGGTATAAAAGAGTTATG
GGAAATCGACCCTGATAAACATCAACCTGGGTTGGTTATTCACACAGCTG
GTTGGCCTCTGcctAGTGATACTTACGGTGGCTCGTTCTTATATCATTTG
GATGAAGGCCCTCTTGTCTCGGCCGGTTTTGTAGTTGGTTTGGATTACAA
GAACCCCTATTTGAGTCCTTTCCAAGAGTTCCAGAGATGGAAAACACATC
CAAGTATTCGGGAAACATTTGAAGGTGGCACTAGAATCGCTTATGGCGCC
AGAGCTTTGAATGAAGGAGGCTACCAGTCATTACCGAAGCTAACGTTCCC
CGGAGGATGTGTGATCGGATGCTCAGCTGGATTCATGAACGTGCCAAAGA
TCAAAGGAACACACGGTGCCATGAAGAGTGGTCTGTTAGCCGCTGAATCA
ATCTTCGAAGCGTTGTCTGACGAAGTCAACCAAGAGAAAGAATCTGGAAT
TGAACCAAGCACTTACGGACAGCGATTCAAAGATAGTTGGCTACACAAAG
AATTGTATTCTGCAAGAAACATTCGCCCGTCTTTCGAAACACCGTTACAT
TTGTGGGGAACCATGCTCTATACTGGCCTCTTTTATTGGCTCGGTGGTGG
TCGTGAGCCATGGACCTTCAAACACGACGGAATCGATGCTGAGAAACTGA
AACCAGCGGCAGAATGCACCCCTATTGAGTACCCTAAACCTGATGGCAAG
ATCACTTTTGATCTACTCTCATCTGTCGCACTAAGCGGCACGAATCATGA
TCACGACCAACCTGCTCatttgactttgaaaaatgatgacgttCCTGTTG
AACGAAACTTAGGAGTTTTTGATGGGCCTGAAGCACGTTTTTGTCCAGCG
GGTGTTTACGAGTACATCGACGATGAAGCAACGGGTGGACGTAAATTACA
GATCAACGCTCAAAATTGTGTTCATTGTAAGACATGTGATATTAAATGTC
CAAGTCAAAATATCAATTGGGTTGTCCCTGAAAGTGGTGGTGGTCCTGCT
TACAGCGGAATgtaaaaaatacagaaaaacattttttataacaaGACGGc
tataaaaaaatgaaacttccaATTCTATGAAAAAGTGGAAGAAGTGATAT
TGACAAAAAACCaagggaaaattattttttatccagtaaaaatataaaaa
aatttaacgaaaaaatTTACGGCACTTGTACATAATAACATTACATTcta
ctttgtttttttgtttgttttattttaccattccaaaatatcttttttta
acaGAATTTGAATTTAGAACATGCTTTGTGAGCTAATGATTTGATCCATA
AGTGTATAatataatttgatattttctatAATTCTTTGGTTTTCTCTTCC
TATTCAAGAtggaaaaagccaaaaaatgtgattttgaattttgcaCAAAA
GTGCAACAAATATCCTTGTATTTGAAATTTTCGGGAA
Run BLAST on NCBI

transcript from alignment at scaffold_404:230448..246533+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063875 ID=TCONS_00063875|Name=TCONS_00063875|organism=Clytia hemisphaerica|type=transcript|length=16086bp|location=Sequence derived from alignment at scaffold_404:230448..246533+ (Clytia hemisphaerica)
ACCTTATCTGGTGCTTGTATTGAAACAAAAGCCTTGGATGAGCTTTTTTC
TGACTGGAAAGAACGTGATGTAAGTCTGCAAATAATGTTTCAACAAAATT
GAATCCATTATtagaaactttgttttgatgagCTCGATTTCGTTATACTT
GTCTTTATCAAGCATTCAAATTACTTTATTGTTTCTTTTTCAGGCTCCAC
TTCATACTGAAGTTACTGGTGATAAAATGTATTATTTGACGGAAAGCAAA
GGGATCAATATTCCAGTTTTTAAAGGTAACCTGCCATATTGTTATTTGCT
TTAGATTTGGTTTGATTGTTTAGAGAAGTACTTAGCCTTGTATTTTAAGT
GATAAAACAACataaaattttctcaaagttCACCTGGACTTTTTTGAGAT
TGTTGagaaaactttcattttcttgaaatataactttatcTGTTTCTTTA
GGTTTGCCAATGTACAACCATGGCAATTATTTAGTACGTCTTGGAAATTT
TGTTCAATGGCTTGGTGAACAAGCTGAACAAATGGATGTTGAAATTTACC
CTGGTATCGCTGCTAGTGAggtattttttaatcaaaaagaaGTTCTAtct
aaaccttttttttatcaatcaaacttggGTGTTTATAATCTTCCTGTTCT
AGATTTTTAATTCTCATCACAGACAAATTCTTTTCACTGTTTATTTTTAA
ACCTATCTTTTGTAAAAAAggataatttctttttaaaaatcttcttctCA
AATATCATTGGCATCGAAAGCATTTACTAATGGGCTAAtttgatttgaat
attttttgtgaaaatgaaaaagaggaGTGGAATTGATTTTTAATATGATC
AGCCATTAtctttccattatttttatcgTTGTTGTTATAGGTTTTGTACC
ATGAAGACGGAAGTGTCAAAGGGATTGCAACTGCAGATGTTGGTATTGCT
AGAGATGGTTCACCTAAGGTATGCCAAACTAATCCCTATATCTAAAATCA
ATGTCCTCCAGATTTTACGGAAATGAGTCTTTTGTGATTCAAGTCAGCCG
AGGACGACTCAAAGCTAGGAGTCCCTTTTTGCCTTTTGATAATTGTCTAT
CAAAAAGGGGAGGGAATGCCACTTTTTTCCCTTGATTTCTCCACCTACCT
TTGATCAATCTTTTTAATTGCCAGGCATTAAGTATAAGGGCATCCTTGGT
AAGACATAGCTGCTGCATGGAGTTTGACCTCCAACTTCCCTTGGCATACG
CCGTTCACAAGTTTACAAGTATATAAACAATTTTGCAGTATGAAATCTAT
GATTTCCTTTCCAGGATACTTTTGAAAGAGGTATGGAACTTCACGCCAAG
GTCACCGTATTTGCAGAAGGATGTCATGGTCATTTGGCGAAACAAATCTT
CAACAAGTTCAATTTACGTGAGAATTCTTGCCAACAAACCTATGGCATAG
GTATAAAAGAGGTGAGAAATCCTATCGGAATTCTGTCAGATAAATTACGA
TTGGTGCCACTTTCTCTAAGCGTCTATTCAATTATTGGATATAAGAGAGT
TTTGAACTTCAAGTGGGATACTGATAGCCTTTGAGTGTTTGATTACGAGA
CTTTCTTTACTACATTCTTCATTTCATGATTCCTCGCTCTGTGtgatttt
attgaaatgaaTGCAATTTAATGGAATCGCTTTAACTTTCAAACTAGTCA
CATGCGGTTTGGTTCCTGTATCTAGTTTTTAGTAGCAATAtcagaataaa
taaaaataaaaatatcaatcaaatgaggtgaaatcatattcaaagagtGG
ATTAGAGCTTCTTTAGTTCTGTAGTTCTGTAGTTTCCATAACGTACTTTG
AAAGTTCAGTTGAATTCTCTTTTTCCTCGTCATACCTAAAAGTATGTTTA
TGTTGGTTCCATCTCGTTTTGAAGGTATTTTCGGTAAGGCCGATGTATTT
AACACCCTCGTCGTCCTCCCCAGACGCAAAAACATTTCACCCCTGTTATC
CTTGAAAGTCATCGATCACGCAAAACCCTATTCAAATGGGGGCAAATCGT
GCAACCTTTGTATGACCGAAAAGTACCACATAATTACTTCCAAAGACAAA
CTTATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGTCATATGagcaaattctttttaaaaaactttaaagacgTC
CCTCCGGACACATTTGATGTCCTTCGTGACAATTCATAGTTTTAcgattt
tatcactttttaccaattttgtaacatatgttttcacacagctttttaat
tttttagttacATCTGATAATTGCTTAGAGCATGAAACTCCGAGTTatgg
atttttaaaattttttggttttgaaatatatttttgattaaaaataaaaa
tatgaatgAGTTTTGACCATGCCCCTATGTCAGAGCTTTTTAGATCATTG
CTAAAGCcctactttttttctttttggggtCATGATTTACGATTCAATTT
AATTAATAAAGTCTTTACATTTTATAATTTAATATCTTTACATTTCAGTT
ATGGGAAATCGACCCTGATAAACATCAACCTGGGTTGGTTATTCACACAG
CTGGTTGGCCTCTGGTACGTATACTTATCGTAATTCTTTTAAACCCTGAA
AACATTCTCTAACAATAATATTGTATAGTATATGTAGCCCTATGCGTAcg
ttgaaattgttttttttttttttactaaaattcaaaaagataaATTAGAT
AAAACAGTCTCGAATATTTTGGCAAAAAGACGTCAAGGTTATCTCAAGAC
CGTTAGCGTCAGAAGACCACAAACAGGCCAATAATTTTAAGCCATCCTAC
TGTGCATTTAATCGGCTTTCCTAAacgattataaaaaaatgaggggAAAG
TAAGGTCACACTTCTATATAATACTTATTTGTGCTTTCGGTAGATCTAGT
AGAAGACGGAAAATTATTCAAAGAGTCTAAAATTAGTTGGTTTCACAGCT
ACCTTAATTTCAAGGCTTAAACAACACATCAATTTTATGACACGTGGGTA
AAACAGACATTATTTTCAAGGGCTTTTTCGAgtatatttcttttcatttt
cagcctAGTGATACTTACGGTGGCTCGTTCTTATATCATTTGGATGAAGG
CCCTCTTGTCTCGGCCGGTTTTGTAGTAAGTTATTTCACTATTCTCAAGT
TTTCAGGACATGAACTATTGAAATACTACCATTATTCTTTCTTATGCACG
TACCTCATCAAAAACAAATAACGGGAGAAGTTATGTTATTTCTTGGTGAG
CTCgactttgatgattttcgaaaaaagaaaccttttaaaagttttagcGT
AGTAGGGGGCCAACCTTTATTATCGGTAACATCTTTCGTGATACTCTGCA
TGTGAAAGTAGAAatgattttgaaacttttttgagagggagcctgcaaaa
aatggcaaaagtttttatggcaAAAAAACTGATGTTGTGAGCAAAATTCC
TAACCCCCAAAATAGGCAAAAAAGTGACTCTTTTTTGGAAttccttttca
ttttaaagGGCCAAGCTAAAACTTTGACGTatagtgtttttaaattggGT
TCATTTGTTCAAAAGTTTTAaggttttaaagtttaaaaaatatgtcaaaa
agtcGCATCAAGTTGAACGCAAATTTACATAAAATAACTCGCGCTCACTA
TTTTATTGACTGTAACAACCCAATTAACGATCCAAGTTGATCTATATCGA
TTTGCAAAATGAAGACAAAAAATAGCAAACGTTGAATCTGACTTAAAAAA
ACCTATAAACACTGAACCATAAGCTatgtataaaaatttttcaCCCAGTA
AATAGACAGAGCATGTATACGAGGTGTATCGTAATCTAGTGTTATGTCAA
ATGTCCTTGATATGATGCAAGTAATGGCTATCCGACCAAAAAAAAGGTTG
GTATGTTGTATAAAAGATGTGAACGTGACTCCGAAAACTAGGCTCGATCA
TAATTTTGAATTAAGCTTCCACGTGCCCATCTCATAAGATTTCTAAAacc
ttcaaagaagtactttgACATTgcgtcttttttatttcaattgaagccgt
atatatataaaagttgcgaagcgatccatagcctcctcgattcgcaagtt
gcaagcaaaaaatTTAAGACATACAAACACTGTATATTCAATGGCATTTG
TGAAGTTTTACTTAATACATTCGCTGCAGTCTTTCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTGACAGCTTT
CCACATTTAAAACACAATTATATACCGTGAGatggggtaacttgcatcag
tggaggctaacatgcatagccctaaaataaatgacctgactggtcattaa
aacacaaagttaaatcaaaacaaatttgtaagGTATGCGAAttcaaaaag
gagaaaagagactgttttaatctaacgtttccagtccatctaaaaagaac
gacaaatatctattaaaaagcaacaaaaaaagaacaacaaacccTAACTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGATAATTGTTTTACTTTTCGTAGCTATT
GTGCGAGATGGACAATTTGCAGAATCATACAAGTCTTGAAGCAACTGTCC
ATGTGGGTCATTAACTAATCttcaaacttcattttttattgaatgATGGT
TAAAACGATTAGGAAACTCAATATGAANTAACTACatatggtttaaaaga
acgcaaaattatgcatgcgaataagtctctatttgggtgagctggaaaga
tTAGATAAACTAACTCATAAACaacaaaggtttttcaaagtttttatagt
TGACGACAAAAGGCATGTCAAAGAAGGTTCAAAAGTTCACGgcaaaagta
aagaaaattttcaagtatGTTGACAATNTCTCTGAAGCATTATAACATGT
TTGACATAATATACACTCTAACAAGCTAGATATGGTAAAAACAGATTCTT
CTGGTGCAGAACTTAGATTTCAATCATAAATTTGGTACAGCAAATATATA
AGACATTTTTGAGCATCAAACTGTTGAAAGTGACTGTGATCATAATCCGT
CTCAAGACAAAAAGAAGGAATCAAATGGTATGTTTCAATCGGTGCATTTG
ACATAGCGATAAACAATTCTCTAATCATTAACTTTCCTGAGTTACCACAG
TTAAtgtcaaaattataaacaaagtcACGAAAACTTTCGACAGAATATAA
TGCTTGAataacagaattaaaaaaagcagacattttggcccaaatttttt
tgcccCTAGTGGAAAAAGTCTTGATTGTCCTGACATTTTGACGAACACAA
TGAGAGAAATATAGAATTAGTGGATATTTAGGACTGTTCTGTTTTGGTcg
gacgtcaaattttttatttaaaaagtgtcGGTGTTGATATTTCTTAATCA
GATCAGACAGACAGGATGCTGGGAAATTTAACTCTTGTGTCaagaaaaat
ttctctcaagtgaaaagaaaactatGACTGTAAAAGGTGCAGTGCAATTT
CCTTCCCACTGCTAAAAGTGaggaaaaagtcaacaaatataTACTTCCCT
GTTGGTGCACAAAGTTATGTGTTGTGTTTTGTTGAATCCAAAATGNNATC
TACATTTAACagatgggaactaaattttcattttccttctgcgctcccct
ggtatatagagtttaaaggtacgcacacactatagcaaaactgcttcgct
catacaATTGAAAACTACatctccttctcacagacaggattttttcagcc
atcgGGGATAAAAATGAAGGACTGCaatcgatggggattgatatttccat
attttttctgGCTTGGGATTTACATTATTTTGTCttcaaatcagaaaatt
cagtggggatggaaaaaatagcatgaTAATTTGCAATGAGGATTgcttta
tttgatttgattattttcgCTGGAGACAAAAATTTGAGTATGAATCTCca
ccgggacgatattttggccaatttttccagtagggATCCCAGTGGGtccg
tgagaagggggtgtaaaacTCGTTTCAACGTAGCCTACAAAaggtttttc
ttatttttcagagTTTCAAGTTCAATCAAATGCTACATGCTATTTGTTTC
CAATATACACACTGTTTTTGTTTcggtgaaaattttttaaattaaccttt
gtctgtTATTTCGTACCCAGCCTttttcgagattggctcattagttgttt
tctgatttttgggaCAAAGATGGCAATTCCCAAAACGGACGAAGccggat
tttcgaaaatatgaaggaaaaaccggtttttcgttattatttttttcgag
atttcatcattagtttttcgaaaatctcggaaatatgccggaaatctccg
tttttgtgcatttccattggattttttcgttattttttcaGCCGCTTATT
ATCTCGATAAAGTAGCATGATTGCCTACTACCTACTCCTAATTCTGTTTA
ACTTTTGTTGTTGGAAAGAATCGGTTTCGGAAAACTGAAGCAACCGTTTA
TGTATTTAATTGCCGGGCATTTTTGCTGCCAGCCTAAAAATTTTCGGACT
TTCTAAAAACTTCCCTTTGTTCAATGACTCGtgattttaaccttttttag
ttcacgtattcatgatattcatgatgtaatcttatGTAATCTTTTCGTTG
ATTGACACTCCGAATGgccgccattattggtggcaaaacaAATGCGTTCC
CCAATGTTTTCCAAGCAAGGACCCccggaaaaaataagaaaatattaata
CAGAAGTCCAAATActccaaatcaaagaaaaaactcTTTCATTGAAATCT
TTTAATTATCTGCAATAGATttccaaaagatatttaattctattatatta
cgtcacaagatattaagctttctttttcgtaaacccccggtttcaataca
aaataggttagcgggacaatttttttgccaccaataatggcggcTAAGTT
GTTAGTCACATCTATTGTTTAGGcgcaaagattacatcatgaatatcatg
aattgatagAAACCCGTACCCACTCTAGATTTATGCTGTAACATTCTGAT
TAAAGATGTTTTGGTTTGCCTACATAATTCAAGCCTTTTACTGCGCACGC
GTTTGAGATGGTACTGTACACGCGTTTTTGTGGCTGGCTTTTGTGTAACA
AATGAGAGACTTTCAGTTAGCGATGATATTTGAAATTGCATTAAATTATT
TATGAGATCCTTATTCATTTgtgaaatttacaaaatttgcatGTGTAGTC
AACAAATGAACCATAATTCCATGTGCGCGTTTCATTGTTACTCACACATG
CGTCACGTAACCTTACAAGTGGAGCGTTTTAATTTAATTCGTTTATCTTT
TTCATCCGGTATACAGTAATATCATATTCTGAGTTTTTTTAGATTGCTGA
ATCGCATGGAAAATGAGAACCTAcagtaccgagtttatgtatttgcactt
ttgaggacggtagagtgactgaagcgatttggaaaaacccgcaattccgc
cccgcaaaatcgaggacggtaaaagtgctgatttaccgtcgtcctcagct
ggtcaggatctactcaaattagaaccttaccttctccgtcgctgaaaaac
acacatacataaactcgctagtgTTCCTCAGTATGCAACAGTATAGGCTG
TGTGTTTTATAGAGTACTTCTAAGTCATTGTGGGCTGcggcatacacgtt
ttttttttaagaaactagttttaccaatcAGCCTCaatatttcttaagaa
atcggtcttttgagccttaaatgtttcttacatgtttctaaactttttga
aaaaatcagcctcatgtttcttaagttttgcttctttaaaaaaacgaatt
aaaaaatgtttttttctcattctcagcctcggcatgtttcttagatgttt
cttagtttttaggcNatgtttttttctcattctcagcctcagcatttttc
ttagatgtttcttagtttttaggcattctgagcctcgtgtttcttaaaag
tgtgtttcttaaagtCTATTTATCTTGACAGATTTATAGCAAATCATGTT
CCGCTGTTCAAAATTCAGTTGCTAGGCAtcagttttctaaaaaaagaaat
gtaTGACAATTCCCTGAATTTAACTCGATACTATAGAGTTTAACAAATGT
ATTTTAACAATGTTATTCTATTATCACGTTTATAAAtaaaacgtttttta
tataacATTTCATGTTCTATTAGAGTAATATGACGCAATAGCGTCTTTAG
CCTAGCAAGCTAGGTGACTAATTCAATAGtagaaagaaaacaaattttag
tcaatcaaaatcccgtaacaataatcgtattatcatttAACGCCTacact
actgtattacacgcattataaacgactccagtctaaataACGCGTAACGA
TGCAGTGCAGTAGGAAgtattttcatattgggggggggctgaagtttaat
GACACAGCGAGGGCCAACCATTGTTTGACccgaggggggggggattttga
aaatttgagctctagattgcttaagaatacactcaaaacatgcacataaa
agacaattatgacaaattaaaaaagaaaaactttgcattttgcaNctaga
ttgcttaaaaatacactcaaaacatgcacataaaagacaattatgacaaa
ttaaaaaagaaaaactttgcattttgcaaaataaccatttttgaaaaaat
tggggggcttagccccccccccagttgctacggcactgcgaTGACATTGT
AATGAATCGATAAGTTATATTGAATTTGGTATTCTCTTTCTTAAATGTGT
CGTTCCCTTTAATTTACACACAGGTGGTGGACGAActttttcaagccaaa
aaaaatcattgtagATTTGTAGATACCCCCTGGAGaatggaaaaatagaa
aaatctctTTGGAAAATTCTTCTCATACCTTATGTAAAGTGAGTTTGGgt
aaaccaaaatcagtttctaCCCTTTGTAAGTTTTATGATTACTTTTTACC
atctggaaaaatgaaaaaataatttccttaGACACCCTGGAAATTCCTCT
ACAATCATGTACAAaacatttgagacaaaggggatttctctgtgaaattt
taaacaccgcAAATAActtttaagcgcgttaaactaaAGTTTTAACTCTA
AGTACGTCTttgaaactctgagttttaacatgagacttaagacttgggac
cttaggatctcaggatgtAAAAGCTGAAATTTGGATTTAAAATGTGGAAT
GCCCCAATCTTCATCCTATGACTCGATTATGTTCTtagattttcgcgaaa
atttatccctttatgtttttataaaattgttcttataaagcaagCGTGAG
TGCCGATGCCGGACTAATGAGTGTTATAAAAATCATCATGTAATGAAATG
TTCTCCGGGAGAATACCTACCCATATAAAGGTATTGGGTCAGAGATAAAT
TTCAAGGATTCAGTCTATGAAGGGTTACATAGATACAGAGCCAAAGTTGT
CTCTCCAAGGGCTTAGTTGGAAATATGAAAGTTCGTGAGCATTTCTTGAT
AAGTATTAGATCCAAGCTGCACATTTGCTCCTGTTAGTAAAAGTTTTCAG
ATGTAGCTTTCATGTTATTCAAATCTCCTGTAGTGATCAATATTTAGTGA
TGGATAGAAAATAAAAGGAACTAATAGCTGTTCTCAGCGAATTCTTATTC
GCGTGCGCTGAAATCTATGAACAACACGCAACGTATCTTTTGTATACAAT
TTAAACAACCCACTGTGCTCTTGTATTGCCATTTTGCTCACGTTCCGCCA
AGGGAATCTCAAGATAACTGGTCCTCTCTTCGGGCTCTGTATATACGCAA
TATAATCAAAAGGGAGCTTTCAGAATATAGAGTTCAGATCTGTTTTCCCC
TCTTTTTCCCTCTTTTAGTTTATTCCCATTTAAAAAAAGCCATTCAAAAA
GCGATATACTACAAAAATATTGATTATATACCTCAAAGCctcagttttca
aaaattacattaAAAATACTGATAAAAATACTATGTTCCTTTTCAGGCTT
TAAGTTAACAAGCCCCAGGCGTATTAAGGACATAAGCGTCAAAGATTTAG
AAGTAGCTGAAGATCGCACAAAATATGCTGGTTCTTTTAATCTGTTTATA
ATCTGTTTTTCTCCATCTTTACTCTTCAGGTTGGTTTGGATTACAAGAAC
CCCTATTTGAGTCCTTTCCAAGAGTTCCAGGTaaactttctcattttttg
gaACGTCTCAATGAATTATATTTAAGAAGGAAAATTACGTTGGGATAAAA
TGCATAACGCGATATTTTATTCAATAACATCTTTTTAACGAGGAAAGGCT
TGGAGAAAATATAACAGCGTAGGATTTAAAGATTATTAGACTTTTTTGGT
GTGTCCGTATTATTTTCACAGAGTCTTGAGATTTTAAACCTGAATATCTC
AACATGTAGAAAATGGAGATATAATGGACAATGCAGTTTCTGATAGCATT
CTTTCAGGGCTACAAAATAGTATGATCTAAATCTCGCAAATATTATTTGA
CGAGGGGGGAATGCCTAAAATGAGCATCTCAGGGTGAAAAATTGATTATT
TGACTGCATCACATTGCatcaaagtcaaattttacCAGAGTGTTCTCCTC
GGAGAATCtccaaaaaaaacattaaaaaaaggtgTGCGTCAAGCACCCTC
TAAAGTTAAATTACGAGGATTATGAAGTGTTGTGATGCTGATTAGTTATA
TAACTTAGCTGTATAACGAAACCACAATATTTTGAGAGgatgtttttttg
tgtttttttttgtaccAATTGTTGGTGTGTTTTGCCTTTTAGATTATGTA
ACTTTTAAAACCGCTTTTAGCACTAAAAATATTTACGTTGTAACAAACAC
CTAAGAAATAGGGGGAAAGAGGGAAAATGAGGGTTGTTAAAGTTCCCttc
tatttcatttttttctctttcactTTGAACCGGGAGTAcccgggggtact
taggcaaaaatgggtgcttggtatgtgcgtgccttaaGGGTCGGGGTTTT
CACATTGAAAAGTTTCCCTACGGGTTGCATGAACCAAAAAAGTTTAGGTT
AttttctctaagggtcaccttttcagcaaaaaatcaGTCTGTCAAGGCTA
ATGGTTCGGATATCACCGATGATCACGTCCTCGTACCCTATTCTGCCAGG
CGTGTTCACCCTTGTTCGATTGGGATGTTATCTATAcagttgtttttctc
tttcccGAGTGTTTTACCCCTTTTTTAGTTCACGTTTTTAATGATCAAAG
GATAGATCCTATGGTAGAGAAAAAGGGGATATCGTCTCTCTTAGTTTTGA
GTTATATAAAGATGAATGAAAGCGACAACATGTTGATATTTTCTAAATCA
ATTTATTCAAACGTTTTGTCAGCCTTTCCAGCCAACATCATCAGTGAAAA
CGACTTTAGTTATAGTTTTGAGTTGTTTCTCTTTTTGTGTATATGGCGCT
ACAAATTTCCGATATTCTCTACTTTCTCATGGTTGAATCAATGTTCACTT
CAGGGTTGTGACCTATGCAATTCCGTTTCGAAAAATGGAAGTTTTTTAGT
TACTTATACTTGAATAAGTTTACAAGTTGCGACGTGAGaacaaaaaacat
tttaggCATATGCCTTCAGATCACGTTTTTTGATGAATATACAGATGCCT
TAGAGAAACGTGACTTCCAGCATGCTATTCTCAGTCTTCTACAACTTTTT
TCGAAGGTACCGATATTTATCGGTTAAATAACCGGTCATCGGTTCTATAT
GTTATACAAACTACACATCTTCACAGAATGTAGAAAACCTCTGCACTTAC
GTAAATACGTATACGCGCACTTACATTACCGAATCTTGGAAACCTCTACA
ACTAGAATTTGTTCAAAGTTATCCGGCACACCAACACTTACATCACCCAA
TTCATAATTGTGTAAAAGGAGACATGATTATTGTTTNACAACTAGAATTT
GTTCAAAGTTATCCGGCACACCAACACTTACATCACCCAATTCATAATTG
TGTAAAAGGAGACACGATTAttgttttcatatttcgatAGAAATCggcaa
ttttgtaattttttagcTGGATTACCCTACATGTTATTGTCTAAAGAACA
GATGATAGGCTAAAGAAACGATGATAGGCGAAAGAACCGACATTCGCTAA
TTTGAACATATCCTTGACTGTTAGAGAAGCAGGGAGTTATATTAGAATTT
AGTATTACCTATCTTTTAAATCCCTCTACTCGAATTTCCAGCTCATTTCG
ATCCTTCCAAAGAATTTAGATTTATAATCTCAAAGGAAAAGTTTCAAAGT
TAGGTTACACAGGATTTATAAACTGGTCGATATGAACCTATTTCTACTGA
GAAGTCAACCCAAatctaaaattcaataaaacagccgtaatgacggctgc
aaactccggtaattgtcatttttgaataGCGAACCATTATGCAAACATCT
TTATCATGGTCAGCCTTTCTTGAacgtaaaatttaaaagagtatatcctA
GTAAGTGCGANccccccccccccccccccgtttatttggaacctaagagt
agatGGTTGGATGGTGTCTTCAATGGTCCCGAGTAAACCTTCAATTTGTT
TGCCTGTAACTATTACTAAAACCGAGATTTGATGATCGAATTCATTTGTT
TTTACAGAGATGGAAAACACATCCAAGTATTCGGGAAACATTTGAAGGTG
GCACCAGAATCGCTTATGGCGCCAGAGCTTTGAATGAAGGAGGCTACCAG
GTGAGTTGCCTGATCTTGTGATAACTTTTGTAAGGGGTGGAATGGTGGAA
TGTTCTAACTTGTCAACTGACGGAAAAtttagttgtttttattttattca
gtAAATGAAATTAAGTAAATAGAGTGTCCGGAATATCGTAAAATCTTTGG
GATATCTTTGAAAAGCTTTGGAAAATCATAGGAAAGGGGGTCATTTGTTC
AATGTTATGTATTTATTTGTTAATGCTCGTCTTTTATATCCTTCGAACCA
GTCATTACCGAAGCTAACGTTCCCCGGAGGATGTGTGATCGGATGCTCAG
CTGGATTCATGAACGTGCCAAAGATCAAAGGAACACACGGTGCCATGAAG
AGTGGTCTGTTAGCCGCTGAATCAATCTTCGAAGCGTTGTCTGACGAAGT
CAACCAAGAGAAAGAATCTGGTTAGTATGGACTCTTGATATATTATATAC
AAAATCTCTTTCAAATTACTAAAATATCCGAATCATGGAGAGTATTTAAT
ACGATTTCGCGGGGACTATGTTTTTGTTCGGATTAAGAAAGATTTTAATA
TAGCATAAATTTTTGTAGNAAACCGAGATTTGATGATCGAATTCATTTGT
TTTTACAGAGATGGAAAACACATCCAAGTATTCGGGAAACATTTGAAGGT
GGCACTAGAATCGCTTATGGCGCCAGAGCTTTGAATGAAGGAGGCTACCA
GGTGAGTTGCCTGATCTTGTGATAACTTTTGTAAGGGGTGGAATGGTGGA
ATGTTCTAACTTGTCAACTGACGGAAAAtttagttgtttttattttattc
agtAAATGAAATTAAGTAAATAGAGTGTCCGGAATATCGTAAAATCTTTG
GGATATCTTTGAAAAGCTTTGGAAAATCATAGGAAAGGGGGTCATTTGTT
CAATGTTATGTATTTATTTGTTAATGCTCGTCTTTTATATCCTTCGAACC
AGTCATTACCGAAGCTAACGTTCCCCGGAGGATGTGTGATCGGATGCTCA
GCTGGATTCATGAACGTGCCAAAGATCAAAGGAACACACGGTGCCATGAA
GAGTGGTCTGTTAGCCGCTGAATCAATCTTCGAAGCGTTGTCTGACGAAG
TCAACCAAGAGAAAGAATCTGGTTAGTATGGACTCTTGATATATTATATA
CAAAATCTCTTTCAAATTACTAAAATATCCGAATCATGGAGAGTATTTAA
TACGATTTCGCGGGGACTATGTTTTTGTTCGGATTAAGAAAGATTTTAAT
ATAGCATAAATTTTTGTAGAACACTCTGAATCGTTGATACTCTATTTAGG
AAAGGAATTATTTTGTACTAACTAAAAATCTTAGAATAACTTAAGGTCAT
ATAAATAAGGTCCACTAATCTACATTCTGATGCGATCCTGAATAAATAGT
TTTTAAGGATTGCAGTCACGAATGTGTCTTTATTTTTTTACACAGGAATT
GAACCAAGCACTTACGGACAGCGATTCAAAGATAGTTGGCTACACAAAGA
ATTGTATTCTGCAAGAAACATTCGCCCGTCTTTCGAAACACCGTTACATT
TGTGGGGAACCATGCTCTATACTGGCCTCTTTTATTGGCTCGGTGGTGGT
CGTGAGCCATGGACCTTCAAACACGACGGAATCGATGCTGAGAAACTGAA
ACCAGCGGCAGAATGCACCCCTATTGAGTACCCTAAACCTGATGGCAAGA
TCACTTTTGATCTACTCTCATCTGTCGCACTAAGCGGCACGAATCATGAT
CACGACCAACCTGCTCatttgactttgaaaaatgatgacgttCCTGTTGA
ACGAAACTTAGGAGTTTTTGATGGGCCTGAAGCACGTTTTTGTCCAGCGG
GTGTTTACGAGTACATCGACGATGAAGCAACGGGTGGACGTAAATTACAG
ATCAACGCTCAAAATTGTGTTCATTGTAAGACATGTGATATTAAATGTCC
AAGTCAAAATATCAATTGGGTTGTCCCTGAAAGTGGTGGTGGTCCTGCTT
ACAGCGGAATgtaaaaaatacagaaaaacattttttataacaaGACGGct
ataaaaaaatgaaacttccaATTCTATGAAAAAGTGGAAGAAGTGATATT
GACAAAAAACCaagggaaaattattttttatccagtaaaaatataaaaaa
atttaacgaaaaaatTTACGGCACTTGTACATAATAACATTACATTctac
tttgtttttttgtttgttttattttaccattccaaaatatctttttttaa
caGAATTTGAATTTAGAACATGCTTTGTGAGCTAATGATTTGATCCATAA
GTGTATAatataatttgatattttctatAATTCTTTGGTTTTCTCTTCCT
ATTCAAGAtggaaaaagccaaaaaatgtgattttgaattttgcaCAAAAG
TGCAACAAATATCCTTGTATTTGAAATTTTCGGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040044XLOC_040044Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063875-exon-scaffold_404-1491911889:230448..230516TCONS_00063875-exon-scaffold_404-1491911889:230448..230516Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:230448..230516TCONS_00063875-exon-scaffold_404-1510915933:230448..230516Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:230448..230516TCONS_00063875-exon-scaffold_404-1575043694:230448..230516Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:230641..230722TCONS_00063875-exon-scaffold_404-1491911889:230641..230722Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:230641..230722TCONS_00063875-exon-scaffold_404-1510915933:230641..230722Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:230641..230722TCONS_00063875-exon-scaffold_404-1575043694:230641..230722Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:230899..231017TCONS_00063875-exon-scaffold_404-1491911889:230899..231017Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:230899..231017TCONS_00063875-exon-scaffold_404-1510915933:230899..231017Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:230899..231017TCONS_00063875-exon-scaffold_404-1575043694:230899..231017Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:231338..231415TCONS_00063875-exon-scaffold_404-1491911889:231338..231415Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:231338..231415TCONS_00063875-exon-scaffold_404-1510915933:231338..231415Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:231338..231415TCONS_00063875-exon-scaffold_404-1575043694:231338..231415Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:231762..231908TCONS_00063875-exon-scaffold_404-1491911889:231762..231908Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:231762..231908TCONS_00063875-exon-scaffold_404-1510915933:231762..231908Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:231762..231908TCONS_00063875-exon-scaffold_404-1575043694:231762..231908Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:233096..233161TCONS_00063875-exon-scaffold_404-1491911889:233096..233161Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:233096..233161TCONS_00063875-exon-scaffold_404-1510915933:233096..233161Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:233096..233161TCONS_00063875-exon-scaffold_404-1575043694:233096..233161Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:233651..233722TCONS_00063875-exon-scaffold_404-1491911889:233651..233722Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:233651..233722TCONS_00063875-exon-scaffold_404-1510915933:233651..233722Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:233651..233722TCONS_00063875-exon-scaffold_404-1575043694:233651..233722Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:241477..241527TCONS_00063875-exon-scaffold_404-1491911889:241477..241527Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:241477..241527TCONS_00063875-exon-scaffold_404-1510915933:241477..241527Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:241477..241527TCONS_00063875-exon-scaffold_404-1575043694:241477..241527Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:244005..244036TCONS_00063875-exon-scaffold_404-1491911889:244005..244036Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:244005..244036TCONS_00063875-exon-scaffold_404-1510915933:244005..244036Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:244005..244036TCONS_00063875-exon-scaffold_404-1575043694:244005..244036Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:244738..244798TCONS_00063875-exon-scaffold_404-1491911889:244738..244798Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:244738..244798TCONS_00063875-exon-scaffold_404-1510915933:244738..244798Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:244738..244798TCONS_00063875-exon-scaffold_404-1575043694:244738..244798Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:245050..245218TCONS_00063875-exon-scaffold_404-1491911889:245050..245218Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:245050..245218TCONS_00063875-exon-scaffold_404-1510915933:245050..245218Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:245050..245218TCONS_00063875-exon-scaffold_404-1575043694:245050..245218Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1491911889:245543..246533TCONS_00063875-exon-scaffold_404-1491911889:245543..246533Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1510915933:245543..246533TCONS_00063875-exon-scaffold_404-1510915933:245543..246533Clytia hemisphaericaexon
TCONS_00063875-exon-scaffold_404-1575043694:245543..246533TCONS_00063875-exon-scaffold_404-1575043694:245543..246533Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:230448..246533 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.14939e-06	1.42204e-07	0	1.17449e-05	0	0	0	0	0	0	0	0	0	0	0	0	3.83632e-10	9.60855e-10	0	0	0	0	6.96604e-08	0	0	0	0	0	0	7.25527e-09
Blast
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BLAST of TCONS_00063875 vs. Swiss-Prot (Human)
Match: ETFD (Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2)

HSP 1 Score: 742.651 bits (1916), Expect = 0.000e+0
Identity = 354/505 (70.10%), Postives = 410/505 (81.19%), Query Frame = 1 
Query:    1 TLSGACIETKALDELFSDWKERDAPLHTEVTGDKMYYLTESKGINIPVFKGLPMYNHGNYLVRLGNFVQWLGEQAEQMDVEIYPGIAASEVLYHEDGSVKGIATADVGIARDGSPKDTFERGMELHAKVTVFAEGCHGHLAKQIFNKFNLRENSCQQTYGIGIKELWEIDPDKHQPGLVIHTAGWPLPSDTYGGSFLYHLDEG-PLVSAGFVVGLDYKNPYLSPFQEFQRWKTHPSIRETFEGGTRIAYGARALNEGGYQSLPKLTFPGGCVIGCSAGFMNVPKIKGTHGAMKSGLLAAESIFEALSDEVNQEKESGIEPSTYGQRFKDSWLHKELYSARNIRPSFETPLHLWGTMLYTGLFYWLGGGREPWTFKHDGIDAEKLKPAAECTPIEYPKPDGKITFDLLSSVALSGTNHDHDQPAHLTLKNDDVPVERNLGVFDGPEARFCPAGVYEYIDDEATGGRKLQINAQNCVHCKTCDIKCPSQNINWVVPESGGGPAYSGM 1512
            TLSGAC++  A  ELF DWKE+ APL+T VT D+   LTE   I +P+  GLPM NHGNY+VRLG+ V W+GEQAE + VE+YPG AA+EVL+H+DGSVKGIAT DVGI +DG+PK TFERG+ELHAKVT+FAEGCHGHLAKQ++ KF+LR N   QTYGIG+KELW ID    +PG V HT GWPL   TYGGSFLYHL+EG PLV+ G VVGLDY+NPYLSPF+EFQRWK HPSIR T EGG RIAYGARALNEGG+QS+PKLTFPGG +IGCS GFMNVPKIKGTH AMKSG+LAAESIF  L+ E  Q K  G+  + Y    K+SW+ KELYS RNIRPS    L ++G M+YTG+FYW+  G EPWT KH G D E+LKPA +CTPIEYPKPDG+I+FDLLSSVALSGTNH+HDQPAHLTL++D +PV RNL ++DGPE RFCPAGVYE++  E   G +LQINAQNCVHCKTCDIK PSQNINWVVPE GGGPAY+GM
Sbjct:  113 TLSGACLDPGAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
The following BLAST results are available for this feature:
BLAST of TCONS_00063875 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ETFD0.000e+070.10Electron transfer flavoprotein-ubiquinone oxidored... [more]
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