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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063910 ID=TCONS_00063910|Name=TCONS_00063910|organism=Clytia hemisphaerica|type=transcript|length=1008bp
CATGCATCAAAGCAATAATAAATAATGGAACACACTTTTGCTAATTATAC
AccagtttgttattgttttgttaGATGGACAGAGTTTTTTATATATTCAA
CATGAATTTGTGGCTAACAAAAATATCTCTAGCTAAATAATGCCATTAgc
tcaataaaaaaaatatgaaaaataagaTCTATTAATTAGGAGAACAATGG
CTGTAGTTGTAATTTGATGATATATTTGAAATTCAACTAAAAGGAAGAAT
AAGTTAAGTTTGAGTATATTCAGAAGtaaatttttgtaagaaaaaaaaca
cttttataaagtctttaagcagcTGTTGTGAGAGCAAATTCATCCGTACA
TAATCCATAATTTTACACCGTTGACTGTCTATAAAATATGGTTTTTTCAA
CGGATAGCCCATTCACGAAATCTTGATGATTATACACAACACATTCTAAG
ATATAGTTTATATTCAAAAATTGCCCAAGCATTGTATATAACAGCAGTGT
ATCATATCATGAACCCATCGGTTGATCTTTGACGAACAGGTGACAGGTTC
AAAATCAGGAGTATTCCAACAAAAATGTGTCCTGCAAAATTTGTCTGTGT
TGCCACTTGTAGCataattctatcaaaagaaTAGTATACATCCaatattc
aaatttcctttGAGAGTAATTTGTCTGCCATTAAAAGCACTTCCTCTTTT
GTTACTACAAACCAGATAACATCAACCATCAACAAGGCCAAATAAATAAC
AGCTTGTTTTCTCTCTACCATGCTTGCTAATTCAGCTAAATTTATTCATT
CTgtcatttgttgtttttttctaaattaagtAAAAGTGTGAAACCATTCT
GATCTGCTGATACTGTTCATACACATACAGACATATGACACATATGGGCA
TAATGGAATCTCTTCAGAACCACACTTGTAAGGGTTGGATTTTTGTTATT
AGAAAAAAGGATCCCCATCCCTAGCACCAAATTCTTCTAAAACCTTTTAa
caaatttc Run BLAST on NCBI transcript from alignment at scaffold_404:792559..793690+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063910 ID=TCONS_00063910|Name=TCONS_00063910|organism=Clytia hemisphaerica|type=transcript|length=1132bp|location=Sequence derived from alignment at scaffold_404:792559..793690+ (Clytia hemisphaerica)
CATGCATCAAAGCAATAATAAATAATGGAACACACTTTTGCTAATTATAC
AccagtttgttattgttttgttaGATGGACAGAGTTTTTTATATATTCAA
CATGAATTTGTGGCTAACAAAAATATCTCTAGCTAAATAATGCCATTAgc
tcaataaaaaaaatatgaaaaataagaTCTATTAATTAGGAGAACAATGG
CTGTAGTTGTAATTTGATGATATATTTGAAATTCAACTAAAAGGAAGAAT
AAGTTAAGTTTGAGTATATTCAGAAGtaaatttttgtaagaaaaaaaaca
cttttataaagtctttaagcagcTGTTGTGAGAGCAAATTCATCCGTACA
TAATCCATAATTTTACACCGTTGACTGTCTATAAAATATGGTTTTTTCAA
CGGATAGCCCATTCACGAAATCTTGATGATTATACACAACACATTCTAAG
ATATAGTTTATATTCAAAAATTGCCCAAGCATTGTATATAACAGCAGTGT
ATCATATCATGAACCCATCGGTTGATCTTTGACGAACAGGTGACAGGTTC
AAAATCAGGAGTATTCCAACAAAAATGTGTCCTGCAAAATTTGTCTGTGT
TGCCACTTGTAGCataattctatcaaaagaaTAGTATACATCCaatattc
aaatttcctttGAGAGTAATTTGTCTGCCATTAAAAGCACTTCCTCTTTT
GTTACTACAAACCAGATAACATCAACCATCAACAAGNGCataattctatc
aaaagaaTAGTATACATCCaatattcaaatttcctttGAGAGTAATTTGT
CTGCCATTAAAAGCACTTCCTCTTTTGTTACTACAAAATTTAACATCAAC
CATCAACAAGGCCAAATAAATAACAGCTTGTTTTCTCTCTACCATGCTTG
CTAATTCAGCTAAATTTATTCATTCTgtcatttgttgtttttttctaaat
taagtAAAAGTGTGAAACCATTCTGATCTGCTGATACTGTTCATACACAT
ACAGACATATGACACATATGGGCATAATGGAATCTCTTCAGAACCACACT
TGTAAGGGTTGGATTTTTGTTATTAGAAAAAAGGATCCCCATCCCTAGCA
CCAAATTCTTCTAAAACCTTTTAacaaatttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063910-exon-scaffold_404-1491911889:792559..793278 | TCONS_00063910-exon-scaffold_404-1491911889:792559..793278 | Clytia hemisphaerica | exon |
| TCONS_00063910-exon-scaffold_404-1510915933:792559..793278 | TCONS_00063910-exon-scaffold_404-1510915933:792559..793278 | Clytia hemisphaerica | exon |
| TCONS_00063910-exon-scaffold_404-1575043694:792559..793278 | TCONS_00063910-exon-scaffold_404-1575043694:792559..793278 | Clytia hemisphaerica | exon |
| TCONS_00063910-exon-scaffold_404-1491911889:793403..793690 | TCONS_00063910-exon-scaffold_404-1491911889:793403..793690 | Clytia hemisphaerica | exon |
| TCONS_00063910-exon-scaffold_404-1510915933:793403..793690 | TCONS_00063910-exon-scaffold_404-1510915933:793403..793690 | Clytia hemisphaerica | exon |
| TCONS_00063910-exon-scaffold_404-1575043694:793403..793690 | TCONS_00063910-exon-scaffold_404-1575043694:793403..793690 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:792559..793690 + |
Blast
The following BLAST results are available for this feature:
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