TCONS_00064024 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064024
Unique NameTCONS_00064024
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2634

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064024 ID=TCONS_00064024|Name=TCONS_00064024|organism=Clytia hemisphaerica|type=transcript|length=2634bp
TAGACACAAGTTGAAAGGATTCAATCAAAGCTCGACGAGAAGAATTTAGA
GGTTGATGAAATGAGAGCTTTCATGAACGAGCTTGAAATCAAATTAGAGG
CAACAGAAAATTCATTGGAACGAAAAAGGAAAGAATCAAACAACCTTCGA
AATTCTCTCAATTCAATCACAAATGCAGATAATGATCGCCTTCAAAGTAC
AACGTTTGAATTGAATCAAGTGTTgcaagaaaaggaaaaattggAAGGTT
ACGTACAAGAGCTAAATGTTAAACTGGAccaatcaaacaaagaaattatC
AATCAATATCAATTAATACGTAATTTGGAGAACGATCTGAAAATAGCTGA
AGAAATGGCTTCAAGGAAGGCAGAGATGGAACAGGAACTTCAAAACTTAT
CACAAAATGCTCAAGAGAATGCAAGCAAAGTAGGTGAATTGGTCaaccaa
aacaaaattcttCAACGACAGATTAAACAGAGTTCAATTGAAATGACTAA
TTTAGCTGATCAAAATAGTGAACTGAACATGGCTTGTGAAGAATTTGCTA
AGGAAAAAGAAGACAGTAAGCAAAGGATTAAAGAATTGAAAGGGAAAGTG
AAGTCAAGCAGAAAAGAGGAGGGTCTCGTTGCTTCATTGGAGGAAGAAAG
AGATCAATTGATCATGAAAAATAACGAGCTGAAGAAGAAAATGGATGAAA
ATAGACTTCTTAAGGAAAATTATGACAGTTTGCTTGGGGAATATCAAACA
TTACAGCGAACATTACGAACAAAAGATTCCGATCGAAATGAAGTGTTTGA
TTACATCAAGACCCTGGTGAACGATATGCTTCTTGGTCAAACACTACAAC
AACCAGTGGATGTCCATGATAAATCGATGCAAGCAACGCTTACCAATTTA
TGCAATACATCAACCGATTATGTTCAGAGTCACAATGATCTGAAACAACG
ACTGGCCAATTCTCAGCTCAAGatGAAGCAACTAATGGAGCACAATCAAC
AAGTGGAGAAAGAAAATCGACAATTACTTGACGCTATTCAAGCTTTGAAA
GAAGACATAGATGTCAAAGAATCAGAAGTGAGAGTGCGAAATTCTGAAtt
taattctttgaaagatcattacaagaatgaagaagaaaagaatttgaaat
cCTTGAAGGAGTACGATGAGATATCAAGTGAGCTCAGAGGatgtttggaa
aaattggaacaagaaaatgaagacttgaAACGACAACTTGAAGGCATGAA
TAAGAAGATACTCAAAGCAAAGGTGGGACAAAAGAAATCTGACGACCAAC
TGAAGATCGCACAGCAGCATGTTGATGACATCATTAGAAAGGAGCTCCAA
GAGATGAGGGATGACAATATGGAGCTGACACAATCTCTTGAAGCGTCCAT
GAAAGAAGCCACATACTGGGAAAATCAAGTCAATCTCAAAGATAACGAAT
TTAGGGAAAAAATCGAAGCAAAAGAAGGAGCGTTTGCGGATGAGATGGAG
AAACTATTAGATGAACTTCGTCTGACTAAAAATTATATCGCTGCACTGCA
AAAAGATGTTGATGAAAAGAAACAGGACAACAAAACCCAAGTTGAGGGTT
TGACGAAAAACCTTGAACAGATGGAGGACGAGGTGCAGAAGATGAGAAAT
GAAAAACAAGACCTCAATGGAGTGTTTGATGAGATTTCAGATATCAAATC
TACTCTCCTGCATTTATCTAAAGAAGTCCACTCCAAGacacCAAATCGTT
ATGAAGATCTGAGCAACAAATTGAATATTTTAGAAGCTAAGatttcatca
aaatctttaCCGAATAAAGGAGCGAAAAAAAACCAACAACAAGCGACCAA
AGATGTCAATAAAAGTCTTCAAAAAGCTCTAAAGCAGGTTGACAAGTTCA
AATCAATGCTTCATGATAAATGTGCAGAATTGGAAAAGTCGAACGTCCCC
AGCAAAATTCTCTCACTTCAAAGAGAGGAGATAAGTAATCTTATTCAAGA
ACttcaacaaaaagaagaagacaTCAGACGTTTGTCAGCCAATCAGAACA
CTCCAAACAGCTATCCATCTCCCACTCATACATTTCACAGCCACTCACCA
ACAAATTATCATTCACCAAACTATAAACATTCTGATAGGATGATTATGAG
TCCTGCTAAATCGGCAGTTCCTGTTCCTGAAAGAATAAGTCCTAGTTCAA
GTCCAAATCTCGaTAGGAGAAAAAATGTTCCAGTTCTTACTGTACCGACT
TCGCCCTTACACCACAATACCTACCAAGGTGACGTAATCGATAATGTTAT
AGATCGTGACGTCATTGAACATGGTGACGACATTAAACACGTGACTTTTA
CGAGTAGAGATGGGGAAGTGTCTCACACATACCCAAACGTCATTCATCAC
AAACATTTCTTCAATAATAATGAAGAAGAGAAAGTTTTCACTTCAACCAT
CTTACCTGATGCTAATCATACGAAGGAGAACTTCGATCAGAACAATTCAC
CACCTAGACGCAAGAAAGAAGaggatcaattttcaaaggtATGATGTGTt
acagtgttaaaagttcttccatTTCAGACGGATTTTCTTCTCAGCGAAGT
ATATATAAAGATGCTTTTCCGTCTTAAAATTCTG
Run BLAST on NCBI

transcript from alignment at scaffold_407:72614..85483+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064024 ID=TCONS_00064024|Name=TCONS_00064024|organism=Clytia hemisphaerica|type=transcript|length=12870bp|location=Sequence derived from alignment at scaffold_407:72614..85483+ (Clytia hemisphaerica)
TAGACACAAGTTGAAAGGATTCAATCAAAGCTCGACGAGAAGAATTTAGA
GGTCATTTTTCTAAATTGTGAAGAAATCTTTGGCTGAATTTCATTCTTTA
TAGTAGTGATATCCTTTTTATATTGACTTTATTTCTCTGATTTTAAGACA
ACCTTTTTACACGATCTTAGCTGAAATACTAGTGATACAGTCTATCATAT
TTCTGTTCAAACTCCTGATTAAACATGTTAGTTTCTTCTCAAGAAGAGGG
ATGATGAGATTTTGATAGCAGCCATCACCAGGGCTCAAACTTTACCCTGA
CTCACTCTTGTATTGCAACACATCACTTTTCTCTCTTTTCTCTAGGTTGA
TGAAATGAGAGCTTTCATGAACGAGCTTGAAATCAAATTAGAGGCAACAG
AAAATTCATTGGAACGAAAAAGGAAAGAATCAAACAACCTTCGAAATTCT
CTCAATTCAATCACAAATGCAGATAATGATCGCGTATGTAGAAAATTTAT
GCTACTGAAAAATTTTAATCTTCCAGGCCCtcaatattttgtcaaaaaag
cTATTCTGAACACTTTATCCCAGGAATTCGTTTTCAAATTGGTTCAAAAT
GAATCCTACTTAGCTTTTTTAACCCAACCCTAccccaaaaaataaaaagt
attacaaatttttaTTGATCAAGAAACCCAACAAAACTATCAAAAgactt
tcttaaaatttttagattacTGGTgtgttttcatgaaaaaaatacttgcT
AACAAATACTAAAGCTGTTTCTCTTTTCGTTAGCTTCAAAGTACAACGTT
TGAATTGAATCAAGTGTTgcaagaaaaggaaaaattggAAGGTTACGTAC
AAGAGCTAAATGTTAAACTGGAccaatcaaacaaagaaattatCAATCAA
TATCAATTAATACGTAATTTGGAGAACGATCTGAAAATAGGTGAACGTCT
TACCAATTTTCATGCTCTGgaggtttttttttaacatgCCACCCCTTTTT
GACAAAAGGAAGTAATCCACATGTTTatgaattttaactttttttgcaga
aatggacgtttttaacttttttggaaaagggCGCTATTATTTGGAAATTA
GACGAAAATGAATAAATGTAGTATTTAAATgtagtatgaagtaagcccta
aatactaatgtatcaactactaacaaacaaaacttgatttacaagcagga
atatctaaccaaacgacgtttgatagcttgaacggtcaactggattttct
ttatgatgaacccagtctgcggccgggtcagaaaatatttttttcacccA
GCcagtttccggaaacactacaatTTTTACTATTAAAGTTCCAGAGCAGA
ACACTCTAGTCATGTTTTAATATATTTAGTCTCCAATATTTACAATAATT
ATATTTAGTATAGAGTAACcacttaaattaaaaaattatcattttctttA
TCAATAGCTGAAGAAATGGCTTCAAGGAAGGTAGAGATGGAACAGGAACT
TCAAAACTTATCACAAAATGCTCAAGAGAATGCAAGCAAAGTAGGTGAAT
TGGTCAACCAAAACAAAATGCTTCAACGACAGTTGAAACAGAGCNATAGC
TGAAGAAATGGCTTCAAGGAAGGCAGAGATGGAACAGGAACTTCAAAACT
TATCACAAAATGCTCAAGAGAATGCAAGCAAAGTAGGTGAATTGGTCaac
caaaacaaaattcttCAACGACAGATTAAACAGAGTTCAATTGAAATGAC
TAATTTAGCTGATCAAAATAGTGAACTGAACATGGCTTGTGAAGAATTTG
CTAAGGAAAAAGAAGACAGTAAGCAAAGGATTAAAGGTAAGTTTTTTTAA
ACCATCTATTAAGCTTTTATAATCTCATACCTTTATTTAATACCTTTACt
ttttactaatgaaaacaaataACCATGCTCGAAATTTATACTTTAATTCA
AACAAACTATTATAGTGAACATGTGAAACAAAAGTTTGCAAGCCGATTTA
AAACGAAATGTTACAGTTCTCTGTAGTCTACAAATTTATTTACACTGTAA
TTTAACACTTACTTCATGTTTGTTTTGTTCGAACTTTGCAACTGATTAGC
TCCTCTTTGTAagctggaaaattttttttttccttgtaATTCTAGATATA
TAACATGTAACGCATTAAATCTTTTTagtaaagtttttgattttgacatt
cTCTTTTACTTTAGAATTGAAAGGGAAAGTGAAGTCAAGCAGAAAAGAGG
AGGGTCTCGTTGCTTCATTGGAGGAAGAAAGAGATCAATTGATCATGAAA
AATAACGAGCTGAAGAAGAAAATGGATGAAAATAGACTTCTTAAGGTATT
CTTTCTGCCACCAGTCACCCTAAATATCAACAATAGTCAGTTAGGCAAGA
AAAGTTAATCAATCTAAATTTTTACTTGCAACTGAAATTTTGAAGCTCTT
CAGCTGCATCATGAGCAGCATTCTGAATCATTTGCTTAGTTTCCAATACA
AAATCTTTTGatgtttcaatttatttttgagtAGGATAAAGAGGTTTTCA
GCTTAGATCTAAATGGTATGCATGTTTTTATGTATTGAACCCTTTTGTGC
ATTCAAGGAAAATTATGACAGTTTGCTTGGGGAATATCAAACATTACAGC
GAACATTACGAACAAAAGATTCCGATCGAAATGAAGTGTTTGATTACATC
AAGACCCTGGTGAACGATATGCTTCTTGGTCAAACACTACAACAACCAGT
GGATGTCCATGATAAATCGATGCAAGCAACGCTTACCAATTTATGCAATA
CATCAACCGATTATGTTCAGAGTCACAATGATCTGAAACAACGACTGGCC
AATTCTCAGCTCAAGGTTTGTGATTTTTCTATGTCTATTTTAATTTGGGC
AGTTTTTTCCAGTTTTggattagtttttttttcacacttCCATTTTTATT
TTCCTAGGACTGACTATAGCCCCAATGATTAAACTCGTTTTcttagattt
taaagatttaaaaactcAATCTTAATGATGAGTATTTTAGAAAGTCACAC
TTAAAAAGGTCATTATTTTTAACAATGTCGATAAAGTTTTAATGAGAATC
TGACAAAACTctgacaaaattttgaaaaattacaagaTATATTGTCAAAT
TACTGCCAGAGCCTGGTTACACTTTTAAAAGACTTGACATATTGAACATT
ACAGAAAAATACTTTCTAGAACTGAtggttttgtatttttttaagtattt
tttgtatttttttttcatagatGAAGCAACTAATGGAGCACAATCAACAA
GTGGAGAAAGAAAATCGACAATTACTTGACGCTATTCAAGCTGTATGTTT
CTTTGGACTACCACAAGTAGTCTGTCATTTCATTCAAAATAGTGTGTTAT
TCAGTAGGTCTTATCGATAATAATGAGGTTACAATTTTCGATTATCATAT
TTCAATATTCCTCAATCAACAAGTTTTCATACATAGCTCAGTGTGCCAAT
CTTCAGTGGAATGATACTTTCCTCTCAAGAGTGTTACTTTGTTTAAATAC
ACCGTTGAGATACCTTAGAATCTTATCCGTTATCTGGTAGACAAGAAATT
CTGCCTTGAGTCCATAGTAATCGTTTTATTCGTTCTCATTTTCAGTTGAA
AGAAGACATAGATGTCAAAGAATCAGAAGTGAGAGTGCGAAATTCTGAAt
ttaattctttgaaagatcattacaagaatgaagaagaaaaggttttttgg
tttattctttaaaggttttatttggACATaattgttcccgtttcatatca
gacgcATATTtaatatcaggacagtgtctgcctattgttatatgctgata
taaaaaaacttgctccacatccgtgtcaattccatgtgaaaaaagcttgt
aaattgaaattgacgagtaagcaaacgatgttactcttatttaaaacctt
taacaGTCTATTGGACTTTATTAGAGTCAGGATTAGAATCAATACATTTT
GGTTGgtttcacgtttttttattagaacatccaaaatttttgaagccttt
gNGAATCAATACATTTTGGTTGgtttcacgtttttttattagaacatcca
aattttttgaagcctttgaatgttcttaactttttgagttttaagcctaa
aaatgttttacaGTGTTCTTTTTCTTGCCGTTTCGTGGGTagtttttttg
caatttcctaagaaattgggtgagTTGTAAAGCCTTAAAGGTTTGAATAA
AAggccttataaaaaaaacgcgtATACTTAAACATGTTTTTGTAAAGGCA
TTGAGAAGACCTTTATTCTCCTGATTCATGTTGATTCATGCAGGTGGTTG
GTAACAGGGATAGTTAGTTAAATTTGGGCGTCAACACTCAGTATTTCTTG
TCACTAAGTCAttcatttcttttcatttcagaatttgaaatcCTTGAAGG
AGTACGATGAGATATCAAGTGAGCTCAGAGGatgtttggaaaaattggaa
caagaaaatgaagacttgaAACGACAACTTGAAGGCATGAATAAGAAGGT
TAACCGAACATTTATTAGCAACCAAAATTGTATTATTTTAAGATTTACGA
AAGTTCTGCTCTTTATACAAACGATCAAAATGTCTAGCTGTCATTTTGGT
CATAGCATTTATCTTGATTCCTATTGAAAGAGATAACGTTTAAGGTAAAA
CAGGAGTATCAAAATGATTCTGTTCTATTTAATGAAAGCATCTCACTTCA
CTTCATTATCCTAAAAGATACTCAAAGCAAAGGTGGGACAAAAGAAATCT
GACGACCAACTGAAGATCGCACAGCAGCATGTTGATGACATCATTAGAAA
GGAGCTCCAAGAGGTAGCATTCTCATTGTTGTACAGTGGGCCGTCTAAGC
TATTGATaccttatataaaacactagatagggctactctgtatttcccaa
gcaacggcaggtgaagcaaaataatgcaccatctttgctgaaagtaggtc
acagtaggtcacagttcggtaccggcaatttgttcaaccaagcaaaaaaa
accTGAATGGTGCGAAGCGACGAGGTGAGGGATAGGCTTAAGGTCAACTT
GGAATTTTCAGTGTCAATTAGTTTTGACAACCTATAGTAACCAATTAAAA
TACAGTACACGTTTTAATAAGATAGTGCAAGTCTGATATGGTTTCTCNTA
TCTTAAAAGATACTCAAAGCAAAGGTGGGACAAAAGAAATCTGACGACCA
ATTGAAAATTGCACAGCAGCATGTTGATGACATCATTAGAAAGGAGCTCC
AAGAGGTAGCATTCTCATTGTTGTACAGTGGGCCGTCTAAGCCATTGATa
ccttatataaaacactagatagagctactctgtatttcccaagcaacatT
AGGTTaagcaaaataatccgccatctttgctgaaagtaggtcacagttcg
gtaccggcaatttgttcaaccaAGCAAGAAAAAACCTAAATGGTGCGAAG
CGACGAGGTGAAGGATAGGCTTAAGGTCAACTTGGAATTTTCAGTGTCAA
TTAGTTTTGACAACCTATAGTAACCAAGTAAAATACAGTACACGTTTTAA
TAAGATAGTGCAAGTCTATAATATGGTTTCTTGGCTATTTTGAAAAGTAG
ATTTTTCATTCACTAGATGAGGGATGACAATATGGAGCTGACACAATCTC
TTGAAGCGTCCATGAAAGAAGCCACATACTGGGAAAATCAAGTCAATCTC
AAAGATAACGAATTTAGGGAAAAAGTAAGatttctaaattttgttttCAG
CGTCACCTTTATGTTTGATTAATTTACATGAGATTGGAACAGGCGAAAAA
TTGGACAGTCATCATTGCCGAATTCAGTCTCGCAAAAAGTTTATCCAACT
ATGTACAATAGAATCCCTTGAATCGTTTCAGatcatttttaccttttttc
tttCGTAGATCGAAGCAAAAGAAGGAGCGTTTGCGGATGAGATGGAGAAA
CTATTAGATGAACTTCGTCTGACTAAAAATTATATCGCTGCACTGCAAAA
AGATGTTGATGAAAAGGTCTGCTTTCGAATTAAAACGAATAAATTATTAA
ATGAAGATATTCACACCCTGTCCTTTAATTATGACATCTtctcttaaggc
cggtctccacttgcgcgcgctgcgatcgcacttttggcttcaatcctttt
tgcttggaaaaaagattacgtcataaaagtgtagcgcgcgctcaaaagaa
aagttgaacacattttaacttttttcaaccgttatacGTCAGACTACTGC
GCCAAtgaagttgcttcatttttcttttgaccaatagcgtggaagttTTG
TTCGGAAaagtgcgattgaagcgcgcgcaagtggagaccggcatTTATGC
CATATCTATTAGTGGGGTAAACgtgtcatcaaaaatacgaaaaaaatgaa
aagttacaGTAAAAAAAAACGATACGGAGCAACGTATAATCAGACCGTTC
CTGAAAGATAATTTCCATTTCGTTTGTATTTCaattattctttatttatt
GGTGTTGTGTTTTCAGAAACAGGACAACAAAACCCAAGTTGAGGGTTTGA
CGAAAAACCTTGAACAGATGGAGGACGAGGTGCAGAAGATGAGAAATGAA
AAACAAGACCTCAATGGAGTGTTTGATGAGATTTCAGATATCAAATCTAC
TCTCCTGCATTTATCTAAAGAAGTCCACTCCAAGGTTTGTTTTGGAATTG
TTTACATCGTTTTCTAtccatttaaaattttaatcctTTTGTCACGTGAT
AAACTGTGGAAAGCCACTAGGCACATATTGTACATTACTGAACGAAATAC
GAGAGACAGAGAAACGAAAAGAGTCTTTCAAACTGCCTCCGACGAGGTTG
GTTCTCCCTATTTGGGGAGATTTATTGTTGGACACTGAAATATACATGTA
ACGCGACGCTAAAAGATGCGTGAAGGAGTACGTTATGGTGATATGAAGTA
GAGAACTCCGCTGGGCCAATATCTAAGACTGAATTGATTACTGGGATTTT
ATCACGAGGATTTCacgattatttattttttggaagAATTGATGCATTAA
ATCTAAACCTCGCTTCGACTCGTGCTTTGAATTCTATGACACCTAACTGG
TTCTCTCTCTATAATAGCTTGGGATCCTGAACTAATCCGGGGACAAATAT
AAATCTTGCTGTTGAGGACTTTTGTCGGGAGTTACTTATTGAGCTTTAGC
GGCTCGCCCGCAAAACTTTGAAGAGCAGAGTAATTGTGTCCTTTCattcg
ggacaagctggagtttgtacaagctcttatttgatttggttggtcgttaa
gatgtaataaaagaatcttattactttttctaaagaacgcgtcatctcta
tcactttaaatgaccaattagtgaagtatcttgtaaaaactccagctcat
ccctttCATTCAACCAATCCAGtcggtttgttttttttatttgttactaa
attctgtttttatttttcagacacCAAATCGTTATGAAGATCTGAGCAAC
AAATTGAATATTTTAGAAGCTAAGGTAAAATACTTTAACTTTTTCCTATG
CTCGTCAAACTAAActaatcttatttttttacaCCTATCCTCCatctttt
tctttagatttcatcaaaatctttaCCGAATAAAGGAGCGAAAAAAAACC
AACAACAAGCGACCAAAGATGTCAATAAAAGTCTTCAAAAAGCTCTAAAG
CAGGTTTGAGGATGAAATCCGTATGAAAATCGATTTCTTGTTTGATTTCA
GCGTGCGAATTATAACCAAATATCATGTTTTCATAATTTACTTTGTCTGC
TCATTTTTAAGGTTGACAAGTTCAAATCAATGCTTCATGATAAATGTGCA
GAATTGGAAAAGTCGAACGTCCCCAGCAAAATTCTCTGTAAGTACAGTAT
CATGATTCCATTTCTCAAATACAACAAGGAAAAGTTATCAATTTCTTTAT
TTGGCTGTTGATTGTCATCAATACATTGATCGTGAAACTTGTAATATTAA
AAAGTAAACAGAAAAGGAAAAGTTATCAATTTCTTATTTTGCGTCATAAC
ACTTCTCGACAGGCTTCTTTTGTTCTAAAACCATCAAAAGTGAAACTCCC
CTAtaaacggaatgaaaaatccaGGTTTTTGGCGAGGTTCACGCTTCTCT
AAGATATGTAGATTGAAATTGAAGCAGTGCTGGAATTTTTAACAACCCTC
TTAAGAATTGTATATCTCTATTACCGTCAACAGTAATGAAAAAAACTCTT
AAATCTTCCTGTAAGATATAACTGAATTGACCGAACTGGATCTATCCGTC
TTTTCCAACAACTGGCTGTAATATAAGTCTCTTTATTTACAGCACTTCAA
AGAGAGGAGATAAGTAATCTTATTCAAGAACttcaacaaaaagaagaaga
caTCAGACGTTTGTCAGCCAATCAGAACACTCCAAACAGCTATCCATCTC
CCACTCATACATTTCACAGCCACTCACCAACAAATTATCATTCACCAAAC
TATAAACATTCTGATAGGATGATTATGAGTCCTGCTAAATCGGCAGTTCC
TGTTCCTGAAAGAATAAGTCCTAGTTCAAGTCCAAATCTCGGTATGAAAT
TTTTAAAGCGCAATTCTTGCAATAAGAGACAACTTTGTGAGTAAATCTGT
TCTCTGACTTAATCTGTTGTCAAGCAAGAGCTTTAGGGTGGATGTGGTAA
TCAGCAATAAAAATCAAATCCTGTTTATTATCggtagaaaattcgtcggt
caaaagtgacgaaaaatcCCTCGGTGACGAAACTTCTGTCGACgaatatt
ttttttgccaaattgaTAAAATGCTCTATTTAAAAGGCAAACGATGGTGC
CATATGGTGTTTTCTAGTCTTAATTCCTCTTAAAAGCCGACGTTTCACTG
GTGAATAGATAATAGTaaatgatttaaatttttctagaTAGGAGAAAAAA
TGTTCCAGTTCTTACTGTACCGACTTCGCCCTTACACCACAATACCTACC
AAGGTGACGTAATCGATAATGTTATAGATCGTGACGTCATTGAACATGGT
GACGACATTAAACACGTGACTTTTACGAGTAGAGATGGGGAAGTGTCTCA
CACATACCCAAACGTCATTCATCACAAACATTTCTTCAATAATAATGAAG
AAGAGAAAGTTTTCACTTCAACCATCTTACCTGATGCTAATCATACGGTA
ATAtaataattaaatatttcctatctatataggaaatatttgttaaaacg
aNCCAAACAGCTATCCATCTCCCACTCATACATTTCACAGCCACTCACCA
ACAAATTATCATTCACCAAACTATAAACATTCTGATAGGATGATTATGAG
TCCTGCTAAATCGGCAGTTCCTGTTCCTGAAAGAATAAGTCCTAGTTCAA
GTCCAAATCTCGGTATGAAATTTTTAAAGCGCAATTCTTGCAATAAGAGA
CAACTTTGTGAGTAAATCTGTTCTCTGACTTAATCTGTTGTCAAGCAAGA
GCTTTAGGGTGGATGTGGTAATCagcaataaaaaaatcaaatcctGTTTA
TTATCggtagaaaattcgtcggtcaaaagtgacgaaaaatcCCTCGGTGA
CGAAACTTCTGTCGACAAATATCTTTTTTGCCAAATTGATAAAATGCTCT
ATTTAAAAGGCAAACGATGGTGCCATATGGTGTTTTCTAGTCTTAATTCC
TCTTAAAAGCCGACGTTTCACTGGTGAATAGATAATAGTaaatgatttaa
atttttctagaTAGGAGAAAAAATGTTCCAGTTCTTACTGTACCGACTTC
GCCCTTACACCACAATACCTACCAAGGTGACGTAATCGATAATGTTATAG
ATCGTGACGTCATTGAACATGGTGACGACATTAAACACGTGACTTTTACG
AGTAGAGATGGGGAAGTGTCTCACACATACCCAAACGTCATTCATCACAA
ACATTTCTTCAATAATAATGAAGAAGAGAAAGTTTTCACTTCAACCATCT
TACCTGATGCTAATCATACGGTAATAtaataattaaatatttcctatcta
tataggaaatatttgttaaaacgataaaatttcttctccttcttctcctt
cttctccaagtctaacgctcggttttggtcaatttcgtgagtttgtacat
gagtctctttttaaatcaagctccggcggtaaaaacagtaggatgttctt
ttttcgaggcggaagacgtcatttcttcgagaaacgtctttggtaaatat
ccgtacggcgctctattctccttgtcgatcgggcaacgtcggccgtttta
gaagcgtattgttgatcggaccgtactgctttgtttctaactgtcaaaac
aaagatggcagaaaatagacaacaacttttgctctttcgctacttttctt
tgctttggtttatatgctttgatgagttgaattggatcatgatttttata
cgattgtcacaagaaatggtcgatagtgaacttttcttaatattcctttc
tggatttgatgtttcgtttacattctgttggtttggagGAATGAGCTgct
ggaatgagagatgataatacaatctcttggtcttggaaaaacaggacatt
ttatcaactttcacaacaaactaacttcaattttgtttgtatatttacat
aaatcgtacgaaggcaagtgactgtgaataaatctgaccatgttatacct
gaaaaattacatactgtttgcaatatgaaaaaagtttgcacccaacgaat
gcaaGCCGACAATATGAaacaatgggaatggttgatgaactgattttatg
taaaaatttaaacatggagcaaaattgactggttaatgattaaatttccc
ttggtttttttatctacaacaatgaattaaccgctggggttagtgacagt
tagtgaaaactcgttgcggttataaatttcaaattttaaagctgatatcc
ggatccggaacaccacggccccaatatgaagaatgttatgttatacttct
taaaaggtttattgcattgtgcattgaatatggatgtaattaatttgaaa
tcaaCTCACATGTactattaaaatttttcttgaacttagagattttcttc
cccgcgtgcattttaaaacgtggaaaactttagttgtgaatttagagatc
ttttgcaacgtgtgttttaaacgtggaaacttttgtcgtgaatNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNccagccaatttgattactgcattgttgttctcagtcgggttcagcttg
gttggatatattccgtgatccgtagctttgaacctacagtcatcttgTGA
ATAATCCTGCAAATACTGtcaataacataaatggaattttgaaattctta
gggattgtgttgcttgatgttatctgagatttaaagcactttgaaatctt
ttgaggacattaattattattttaacatttgtaaaggaaatatttatccg
catctttgcggctcttgtttgtATTAATATTGatataccccttttttacg
tgttttttacactttccgaaaagtgaattttgactttaaaagctcatcaG
TAGAGAACAAAtcggtcaaatttaaaaagtgatagctcaaattttaagtt
aggatatctactttctaaatatctaaactccaagcactttgggacatttg
ttcgacctcaagacgtcgagaaacgtctgaactttttcgtgggtcacccg
gtagtcATCTTTAAGAAATCGTCTTTGCTAAAATCAACCGAGCTAATTAA
CCCCATGGTCCCCGGTTGCTACAGCACTGGGTAAGTCTTTGTTCATCGTT
TTTCGATCAAAGTGTGTACACATGTTTTGttgaattgttagaatttcttt
tcaaaactcctgtcatttaaagaatatttgataatttttctgTCTTGAAT
TATCCTAGAAGGAGAACTTCGATCAGAACAATTCACCACCTAGACGCAAG
AAAGAAGaggatcaattttcaaaggtATGATGTGTtacagtgttaaaagt
tcttccatTTCAGACGGATTTTCTTCTCAGCGAAGTATATATAAAGATGC
TTTTCCGTCTTAAAATTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040147XLOC_040147Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064024-exon-scaffold_407-1491911889:72614..72664TCONS_00064024-exon-scaffold_407-1491911889:72614..72664Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:72614..72664TCONS_00064024-exon-scaffold_407-1510915933:72614..72664Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:72614..72664TCONS_00064024-exon-scaffold_407-1575043694:72614..72664Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:72959..73096TCONS_00064024-exon-scaffold_407-1491911889:72959..73096Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:72959..73096TCONS_00064024-exon-scaffold_407-1510915933:72959..73096Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:72959..73096TCONS_00064024-exon-scaffold_407-1575043694:72959..73096Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:73397..73553TCONS_00064024-exon-scaffold_407-1491911889:73397..73553Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:73397..73553TCONS_00064024-exon-scaffold_407-1510915933:73397..73553Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:73397..73553TCONS_00064024-exon-scaffold_407-1575043694:73397..73553Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:74213..74449TCONS_00064024-exon-scaffold_407-1491911889:74213..74449Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:74213..74449TCONS_00064024-exon-scaffold_407-1510915933:74213..74449Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:74213..74449TCONS_00064024-exon-scaffold_407-1575043694:74213..74449Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:74828..74958TCONS_00064024-exon-scaffold_407-1491911889:74828..74958Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:74828..74958TCONS_00064024-exon-scaffold_407-1510915933:74828..74958Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:74828..74958TCONS_00064024-exon-scaffold_407-1575043694:74828..74958Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:75221..75478TCONS_00064024-exon-scaffold_407-1491911889:75221..75478Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:75221..75478TCONS_00064024-exon-scaffold_407-1510915933:75221..75478Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:75221..75478TCONS_00064024-exon-scaffold_407-1575043694:75221..75478Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:75884..75955TCONS_00064024-exon-scaffold_407-1491911889:75884..75955Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:75884..75955TCONS_00064024-exon-scaffold_407-1510915933:75884..75955Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:75884..75955TCONS_00064024-exon-scaffold_407-1575043694:75884..75955Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:76259..76354TCONS_00064024-exon-scaffold_407-1491911889:76259..76354Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:76259..76354TCONS_00064024-exon-scaffold_407-1510915933:76259..76354Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:76259..76354TCONS_00064024-exon-scaffold_407-1575043694:76259..76354Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:77045..77161TCONS_00064024-exon-scaffold_407-1491911889:77045..77161Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:77045..77161TCONS_00064024-exon-scaffold_407-1510915933:77045..77161Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:77045..77161TCONS_00064024-exon-scaffold_407-1575043694:77045..77161Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:77381..77476TCONS_00064024-exon-scaffold_407-1491911889:77381..77476Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:77381..77476TCONS_00064024-exon-scaffold_407-1510915933:77381..77476Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:77381..77476TCONS_00064024-exon-scaffold_407-1575043694:77381..77476Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:78280..78387TCONS_00064024-exon-scaffold_407-1491911889:78280..78387Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:78280..78387TCONS_00064024-exon-scaffold_407-1510915933:78280..78387Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:78280..78387TCONS_00064024-exon-scaffold_407-1575043694:78280..78387Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:78572..78679TCONS_00064024-exon-scaffold_407-1491911889:78572..78679Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:78572..78679TCONS_00064024-exon-scaffold_407-1510915933:78572..78679Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:78572..78679TCONS_00064024-exon-scaffold_407-1575043694:78572..78679Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:79180..79347TCONS_00064024-exon-scaffold_407-1491911889:79180..79347Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:79180..79347TCONS_00064024-exon-scaffold_407-1510915933:79180..79347Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:79180..79347TCONS_00064024-exon-scaffold_407-1575043694:79180..79347Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:80134..80187TCONS_00064024-exon-scaffold_407-1491911889:80134..80187Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:80134..80187TCONS_00064024-exon-scaffold_407-1510915933:80134..80187Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:80134..80187TCONS_00064024-exon-scaffold_407-1575043694:80134..80187Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:80271..80366TCONS_00064024-exon-scaffold_407-1491911889:80271..80366Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:80271..80366TCONS_00064024-exon-scaffold_407-1510915933:80271..80366Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:80271..80366TCONS_00064024-exon-scaffold_407-1575043694:80271..80366Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:80475..80550TCONS_00064024-exon-scaffold_407-1491911889:80475..80550Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:80475..80550TCONS_00064024-exon-scaffold_407-1510915933:80475..80550Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:80475..80550TCONS_00064024-exon-scaffold_407-1575043694:80475..80550Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:81006..81254TCONS_00064024-exon-scaffold_407-1491911889:81006..81254Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:81006..81254TCONS_00064024-exon-scaffold_407-1510915933:81006..81254Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:81006..81254TCONS_00064024-exon-scaffold_407-1575043694:81006..81254Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:81601..81860TCONS_00064024-exon-scaffold_407-1491911889:81601..81860Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:81601..81860TCONS_00064024-exon-scaffold_407-1510915933:81601..81860Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:81601..81860TCONS_00064024-exon-scaffold_407-1575043694:81601..81860Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1491911889:85322..85483TCONS_00064024-exon-scaffold_407-1491911889:85322..85483Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1510915933:85322..85483TCONS_00064024-exon-scaffold_407-1510915933:85322..85483Clytia hemisphaericaexon
TCONS_00064024-exon-scaffold_407-1575043694:85322..85483TCONS_00064024-exon-scaffold_407-1575043694:85322..85483Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:72614..85483 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0267407	0.118557	0.0878438	0	0	0	7.96224e-07	1.232e-08	0.00952658	0.228091	0	0.0738112	0.301889	0.184332	0.149799	0.0640415	0.441056	0.746677	0.181453	0.113636	0.296697	0.284208	0.196681	0.0923001	3.39693e-06	0.014553	0.0806864	0.022369	0.0913203	0.10014
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064024 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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