TCONS_00064057 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064057
Unique NameTCONS_00064057
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064057 ID=TCONS_00064057|Name=TCONS_00064057|organism=Clytia hemisphaerica|type=transcript|length=5146bp
TGGAATCTTTGGTCGATGGTTTGTTCTAATTCTCCAATAGTTTTCTCCAG
TTCTGTTTTGCGTGACTTCATTTTGACTACATGAAGAAAATATTGTGAAA
CATGAGAAAGTGAATTAACAAACCATCACCAGGGTAGATCCTCCAGATCA
ATTTATAGCAGtccattttgagaattttttttatcaaaacgaggcaagtt
cTGCTCGTGACATAATTCATGATGATACATGAAAGACTAAAGGATTGTGA
GTGAATCTAAAATGTATTGATTTCTGTAGAAAAATTATAGATTCGACATC
ATGGTGAGAAAGTTGAAGAAATTGAATGTGAGGTGATATAAAATGAAGGA
AACTGAAACAGCCAGTGTCCTTGTATTTCGTTTCGTTTCCCGTATCTAAA
TAATTGATTGACAGCTTGACTGTGTTTTTCAAACCCTCGTTGCTACGATA
TCTTCTTTCTTTGAAatggaagaatttttcgcgatttttaacacttttta
atttctttgttaTCACAGTTATAGCATGATAGAGAAGACAGACTACGACC
TTTCAATTTATTCATGGTTTGTTTGAATCGTCTTTTAAAGTTGTATtcaa
tttttggtaaaaatgaaacaaaaagccGTCTCTCcactatttttaaaatt
ttgcggtattttttcatgaaattttgcaattCGATGCACATAGCAAATTG
TTTTATACTTATCCAAGTCTTTTTTTTTAGCCTTTTATAATGTATTTTGC
TAGAATCATCATTTCTACACTGGGAGAGGCGGGATGAGTGAAAAAACAAC
GGGGCAACAAAAAATTCGTCATATGTGTTAAATCAAACAGAAAGTTGCTA
AGAGTTGAAGCTACTTAGAGCACAGTTTTATGGCatttctttgattattt
ttcatattgttgGATTTGCTTGCACTGAAAAAGGAAGTTTTTGAAGATAT
CAATGATTGacatcattttgaaatttcgagaTACTGTAGACAAAGAAAAT
tagcttgaaaatattttctacgGACAAGATTTTAGTTTGGGTTGGAAGAG
TTAGAGAGATTATATTAGAACGGAATTCGACCTAAAGAATTCAAAAATGA
CCTAGTAACCTGTAGCGACCAAGAGTTTTGTTCGAGAAAGAGCGATATTT
GAGTAAGAGAGATATTTAAGTAAGACTGTTTTCTAGAGCATTAGCATATT
CGAGGCTCAATATTTTGCGAGagaggcgagaccaatttgattagttgttt
tacgggcccgaccgaccctcaagttccaaaaatcgaaataaaatagattt
tggtagtatatttttattttcattgctttacagactgccaaattttcaaa
attttggtagtttttccaaggttttaagaatttttcattttatccatgaa
tttgacctttttgtgtcttttaggAGATCTTATAGGccaaattctacttt
tatttttatattttttcgccgaccgaccgaccctcttctttgggtagctt
ggcccgtaaaacaacaaattagatTGGCCTCGCTTAAAGACAGCTTACGA
AAAGTGTGGAATCTCAGATAAGCTGTTTCATGATAAAGCAAATATAACTG
AGGGAAAGAGCTCATTATCAGATAATGCTATGTGAAGCTCTAGAGAGAGA
TACATATAAAAGAGAGAAAGTGAAATACCATTTAAACTGATTAACATTGC
ATGCCTATTATCTTTTAGTGTGGTTTCTTTTAGCAATTTACATGATAACT
aaattgaaaagcttttaaaagTGGTCTCTTGATGTAGAAAATACTCTATC
GTTATTAAGGGAGATAACAACATTCATTATTACGAGAAAGCGTATTAAGT
TGTAGTAAGGAAAAATGGCGTGCGATCAAgCCATGTACGACAAGACATTA
TCGAACACCTTCATCATATTGTTAGCGTTGACGTGCTACACTTCAGTTCT
GGTGGTTTTAGCTCTGGTGTACCCAACCACTCAAATCATCAACATACAAC
TCAAAGGCTTTGAATATCAGAATCACCAGAGACGAGATGTCGAAGATTtg
gaaaatgaaattcaaagTGTTTTTTCACCGGAGAAATGCAAAGAGGATGA
AAAGATGCGTTTGATCACCTCAGGTTATGACAAAAGAACAGAagagatta
cgtcatatattGACTGTCATTGCTCGAAAAGGAATAAGTGTGTACCTAAC
ACACTAGGCAGAATCTCAGTCAACATGAATGTAACAAGAATGGATGAAGT
CTTCAAGGAGAGTTTCACAAAAATCCTCAATCCTGGTGGTTGGTATGCTC
CAAAACAATGCAAAACGAGCTCAGtaagccaaattgaaatatctaatTTG
TAAAGACTCTTTTAACAGTCAAGAACACCTTTAAGGTGGATTCCCCCTGA
CTCAACAGGgtatttcagagaaaaaataaaaaaaaccttttttttgaacC
AGACCCTCAGGACACATCTATCTTACGCAGAATTTATCGTAGAATCAGAA
TATCACATCCATTTGGTCTCAAATTTAATTGCTTTTtcggaaattgattt
ttcagaGGCATGgtatataaaatttttgaaaaaaaaatcaacgttTTTTG
TCATTTGCCCCTGGGAAGGCAAAGCGCAATTGCCGACCGTTTCCGTACGC
CCAAGCGCCCATTTCGCGCCCCTAAAGCCTCCTTTTCGTGCAGATCCAAT
TTCGTGACTTTTCACACGggattgttttcaaaaatcgctCTTAGAAAGCT
CAACAGTCAGACCAAGCTGTATAATATTAGTGACTGAAGAAATCTCAAGA
AATCTGACTGGTTAGTACTAAAACATGGGGAAACCAAGCTCTACTAAACG
TGAAAGAGCTTCTGGTAATGCAGGTCGTTGCACAAAAGCAAGATCAAAGG
CTCTTTATGCTCCAAAGAAGAAAACTTACAACTTCGAGAAGAAGCGACCG
ACTGCGACTACGGCTTCAAAATCGTCAATCGACAACACTTCAAACAAGGA
AAGTGAACTTCCAGAGACTGCATCTAGCTCTAAAATTGGAAGTACAACTA
TACCTGAGACTCCTGAAAAATCAAGACCAACTGAAAATAACAGCAGTACT
ACAAACCCTGGTCCAAAAATGATTCACGGCTACCGTTTTGTGGATATGAC
GATATTAGCGTCAATCTTCACCGTCCTTAGTTGCCCTGGATGTAATGGTG
TACGTTGTCTAAACCTCCATGAAAAtgatgttaaaaagaaaggactAGCA
AGCCATCTTGTTCTTCAATGCTCTGTGTGTCTTTATGAGCAATCATTTTT
CACTTCGAAGCAAGTGCAATACCCGAATGAAGGACGCGGTGGTGCTAAAT
TCTTCGATGTGAATGCTCGGTCAATTTATGCTTCACGACAAATAGGTGGA
GGCcatgaacatttgaaaaagttttgcaCTTACATGAATATGCCTCCACC
AGCTCTTGAAGGAAGCTATAGCAAAATGACAAAGAAATTGAAGGAAGCGG
CAAAAACTGTTGCTGAAAAAAGCATGTCTGATGCTGCCGCTGAACTGCGC
GGGGAAGCAGAATCAGCTGACGTTGGCGTTTCTATTGACGGGACATGGCA
GAGAAAGGGATATACTTCCATGAATGGTGTTGTGACTGCTATATCAGTGG
ATAATGGAAAGGTTCTTGACACAGCTATCATGTCAAAGAATTGTAAAGGC
TGTACCAAAATGAAGTCTGTTAAAACCACTGATCCGCAACGATATGACGC
GTGGAAAGCTTCTCACAAATGTGGGCTCAATTTCAAAGGATCTTCCCCAG
CAATGGAAAAAGAGGGAGCAATAAACATTTACAATAACTCTACTAAGAAA
CATGGGCTATATTACACTTCATTTTTTGGTGACGGTGATTCAAAATCGTT
TACGGCGGTACAAAATACCTATGGTCCGCGCAAGCCTGTAAAGAAACATG
AATGTATTGGCCACTATCAAAAAAGAGTCGGAACTCGTCTTCGGAAATTG
AAGAAGTTAAACAAACGCCTAGGAGGTGCAGGAAGATTGACTGATGCCAA
GATAGATTGTCTCCAAAATTATTTTGGCATCGCACTGCGTCAGAATGTGA
ATAATCTTGACGAAATGGTGAAATCAACCAAAGCGTCAATGTTTCATGTT
GCGGGATACCATGACAACTGCCCCAATCATAAAGATAGCTGGTGTCAATA
CAATCTTGACAAATTAAATGGCAccaatttctacaaaaagaaagGCTTCC
CTTTAGATGTACGTCAAGCAATTTTGCCAACCTACAATGATTTATGCACA
CGCGAAAAACTCGAAAAATGCTTACACGGTCGTACTCAAAACGCAAACGA
GAGTTTTAACGGTATGATTTGGAACCGCATCCCAAAAGCCAACCATGTGG
GTTTACACATCCTCAGCTTTGCTGTCTATGATGCTATTTCTCATTTCAAC
AATGGTGGTATAGCAGCCTACAACATCTTAACTAAAATGAACATGGAAGC
AGGAAAGTACACGGTCAAAGGTCTAAACCTTCAGGATTTGATCCGTAAAC
GACGGTCAGCTTACCGAATGTCTTCTCCCCAAACAAAGAGAAGAAAAGTT
ATCAGACACctgagaaaaacaaaacaagacaaattaattgaaaaagaAGG
GAAAACTTATGAATATGGTGGCTTTGAATGTTGATTTAATGTAGATTTGT
AGAGACTTTATGTTTTTAGATTCAAAATATCAGTTATAATTTTTAGCgcg
ttttcttatttttgcaaGTTTTTTCAACACGGGTCGGGGCATAATTTCTG
AACCGCTTTCTCAATCAAGCTCATTTTTTCAGTGAATGTTTATTGGAAAT
AAAAGGATGTTTTGGTTGTagagtttttttgaatttcaccaTAAAAAGTG
TTTTATGTTTGAAgcaacttttgtatttttttgtattttttgccgGTCCG
AAGAGTTAAGCGGTCTGTTCTATGaggttcaaatttcaaaattttaattc
accCAAAACATGCATCTATATAAGGGTGATCAACTCAGAAAGTTTCATTG
GTATATCTTTTTAACTTCTCCGGAAATTGACCGACCCGTGTTTGACCTAT
TTTGGCACTTTTCGGTGCACGGCTCcggccgccattatggattttt
Run BLAST on NCBI

protein sequence of TCONS_00064057-protein

>TCONS_00064057-protein ID=TCONS_00064057-protein|Name=TCONS_00064057-protein|organism=Clytia hemisphaerica|type=polypeptide|length=619bp
MGKPSSTKRERASGNAGRCTKARSKALYAPKKKTYNFEKKRPTATTASKS
SIDNTSNKESELPETASSSKIGSTTIPETPEKSRPTENNSSTTNPGPKMI
HGYRFVDMTILASIFTVLSCPGCNGVRCLNLHENDVKKKGLASHLVLQCS
VCLYEQSFFTSKQVQYPNEGRGGAKFFDVNARSIYASRQIGGGHEHLKKF
CTYMNMPPPALEGSYSKMTKKLKEAAKTVAEKSMSDAAAELRGEAESADV
GVSIDGTWQRKGYTSMNGVVTAISVDNGKVLDTAIMSKNCKGCTKMKSVK
TTDPQRYDAWKASHKCGLNFKGSSPAMEKEGAINIYNNSTKKHGLYYTSF
FGDGDSKSFTAVQNTYGPRKPVKKHECIGHYQKRVGTRLRKLKKLNKRLG
GAGRLTDAKIDCLQNYFGIALRQNVNNLDEMVKSTKASMFHVAGYHDNCP
NHKDSWCQYNLDKLNGTNFYKKKGFPLDVRQAILPTYNDLCTREKLEKCL
HGRTQNANESFNGMIWNRIPKANHVGLHILSFAVYDAISHFNNGGIAAYN
ILTKMNMEAGKYTVKGLNLQDLIRKRRSAYRMSSPQTKRRKVIRHLRKTK
QDKLIEKEGKTYEYGGFEC
Run BLAST on NCBI

transcript from alignment at scaffold_407:97813..104269-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064057 ID=TCONS_00064057|Name=TCONS_00064057|organism=Clytia hemisphaerica|type=transcript|length=6457bp|location=Sequence derived from alignment at scaffold_407:97813..104269- (Clytia hemisphaerica)
TGGAATCTTTGGTCGATGGTTTGTTCTAATTCTCCAATAGTTTTCTCCAG TTCTGTTTTGCGTGACTTCATTTTGACTACATGAAGAAAATATTGTGAAA CATGAGAAAGTGAATTAACAAACCATCACCAGGGTAGATCCTCCAGATCA ATTTATAGCAGTCCATTTTGAGAATTTTTTTTATCAAAACGAGGCAAGTT CTGCTCGTGACATAATTCATGATGATACATGAAAGACTAAAGGATTGTGA GTGAATCTAAAATGTATTGATTTCTGTAGAAAAATTATAGATTCGACATC ATGGTGAGAAAGTTGAAGAAATTGAATGTGAGGTGATATAAAATGAAGGA AACTGAAACAGCCAGTGTCCTTGTATTTCGTTTCGTTTCCCGTATCTAAA TAATTGATTGACAGCTTGACTGTGTTTTTCAAACCCTCGTTGCTACGATA TCTTCTTTCTTTGAAATGGAAGAATTTTTCGCGATTTTTAACACTTTTTA ATTTCTTTGTTATCACAGTTATAGCATGATAGAGAAGACAGACTACGACC TTTCAATTTATTCATGGTTTGTTTGAATCGTCTTTTAAAGTTGTATTCAA TTTTTGGTAAAAATGAAACAAAAAGCCGTCTCTCCACTATTTTTAAAATT TTGCGGTATTTTTTCATGAAATTTTGCAATTCGATGCACATAGCAAATTG TTTTATACTTATCCAAGTCTTTTTTTTTAGCCTTTTATAATGTATTTTGC TAGAATCATCATTTCTACACTGGGAGAGGCGGGATGAGTGAAAAAACAAC GGGGCAACAAAAAATTCGTCATATGTGTTAAATCAAACAGAAAGTTGCTA AGAGTTGAAGCTACTTAGAGCACAGTTTTATGGCATTTCTTTGATTATTT TTCATATTGTTGGATTTGCTTGCACTGAAAAAGGAAGTTTTTGAAGATAT CAATGATTGACATCATTTTGAAATTTCGAGATACTGTAGACAAAGAAAAT TAGCTTGAAAATATTTTCTACGGACAAGATTTTAGTTTGGGTTGGAAGAG TTAGAGAGATTATATTAGAACGGAATTCGACCTAAAGAATTCAAAAATGA CCTAGTAACCTGTAGCGACCAAGAGTTTTGTTCGAGAAAGAGCGATATTT GAGTAAGAGAGATATTTAAGTAAGACTGTTTTCTAGAGCATTAGCATATT CGAGGCTCAATATTTTGCGAGAGAGGCGAGACCAATTTGATTAGTTGTTT TACGGGCCCGACCGACCCTCAAGTTCCAAAAATCGAAATAAAATAGATTT TGGTAGTATATTTTTATTTTCATTGCTTTACAGACTGCCAAATTTTCAAA ATTTTGGTAGTTTTTCCAAGGTTTTAAGAATTTTTCATTTTATCCATGAA TTTGACCTTTTTGTGTCTTTTAGGAGATCTTATAGGCCAAATTCTACTTT TATTTTTATATTTTTTCGCCGACCGACCGACCCTCTTCTTTGGGTAGCTT GGCCCGTAAAACAACAAATTAGATTGGCCTCGCTTAAAGACAGCTTACGA AAAGTGTGGAATCTCAGATAAGCTGTTTCATGATAAAGCAAATATAACTG AGGGAAAGAGCTCATTATCAGATAATGCTATGTGAAGCTCTAGAGAGAGA TACATATAAAAGAGAGAAAGTGAAATACCATTTAAACTGATTAACATTGC ATGCCTATTATCTTTTAGTGTGGTTTCTTTTAGCAATTTACATGATAACT AAATTGAAAAGCTTTTAAAAGTGGTCTCTTGATGTAGAAAATACTCTATC GTTATTAAGGGAGATAACAACATTCATTATTACGAGAAAGCGTATTAAGT TGTAGTAAGGAAAAATGGCGTGCGATCAAGGTATATTTCATTTTTTTGAC TGGGAGCCTCGCAAAATCTTTATAAAAACTATCATTTTTAGTGGTAGAGT CAACAACAAGCAGTATGTATATAATAACGAAAGATTGATCAACTAAGAGA ATTTTTATCTAGCAGATTCTTCCTGCTGTTATCAAATTCAAAACAAACAA AATTTCTCTTTAATTTTTTGAACTCCATCAAATTCTCTTATGAGGTATTT TGAGTGGAAAGAGGAAGAGATATAATAAGTTTTATCTTACAAAATCCTCT GAAGAGATAGATGTTAACATAACATTTATTTATTCGGAACATTCGTCAGC ACAAGGAGGTGGCGGTTCAGGGTTTGCTGGGAGCAGGCTGGACCCTTTTT CGTCATGATCGGCAAGATTCGACAAAATTAGCTAGATTTGCAGAGTTTAT GGGTCCATTGTTGGAAAACTGGCGAGATCACTAAGTCCAAAAACCTGAAG TATGGTTGCGGCTCTTGCTTATCATATTTTTAGCCCCAACCCCTACAAAA TTTTGGTGCGGACTCGAAAAAGATAACATGCAGTTTCTTCCTCGCCGTGA ATAAATGTTCTTTTAGTTATTGGCGGATATTAGGTATTTAAGTTCTTTTT ATTTTCTACTAGCCATGTACGACAAGACATTATCGAACACCTTCATCATA TTGTTAGCGTTGACGTGCTACACTTCAGTTCTGGTGGTTTTAGCTCTGGT GTACCCAACCACTCAAATCATCAACATACAACTCAAAGGCTTTGAATATC AGAATCACCAGAGACGAGATGTCGAAGATTTGGAAAATGAAATTCAAAGT GTTTTTTCACCGGAGAAATGCAAAGAGGATGAAAAGATGCGTTTGATCAC CTCAGGTTATGACAAAAGAACAGAAGAGATTACGTCATATATTGACTGTC ATTGCTCGAAAAGGAATAAGTGTGTACCTAACACACGTAAGTAATGAAAG GTTCTCGGATTCTTAAATTGCCCAACTTTCCCAACATCTTTAAAAAGCTT GATTTAAATACAAAAATTTATAATCTAGTTGCTTTACTTTAAAGTGATCT TGTTAGACGCTATAATTATTTTAGAAAACTCTCCAAAATCTTCCAATAAT AGTGAGAGGTTTAAAATTGATCGAAATTTGCGCATATATTCTTCCTCGGG GGGGGGGGGGGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNGATTACGGTATTTCATTTTCTACCGGTAT CGGTATTTAGGTAATTAGGCTTCTTTTATCGACGGTATTACGGTATTTGA CCCAAATTTTTGTCGGTATGACAGTATTTAAGACCCCTGAAGCCCCCCTT CCTCTAAGTCGGAGCCATGCGACACCTTCCACTGACCCTGTGTAAAGTCG ACTCAAAATGAGCACTGTGAAAATGAGAGGTCAGACTCATTCTAGTATTT TTCTTTCACTTTCAGTAGGCAGAATCTCAGTCAACATGAATGTAACAAGA ATGGATGAAGTCTTCAAGGAGAGTTTCACAAAAATCCTCAATCCTGGTGG TTGGTATGCTCCAAAACAATGCAAAACGAGCTCAGTAAGCCAAATTGAAA TATCTAATTTGTAAAGACTCTTTTAACAGTCAAGAACACCTTTAAGGTGG ATTCCCCCTGACTCAACAGGGTATTTCAGAGAAAAAATAAAAAAAACCTT TTTTTTGAACCAGACCCTCAGGACACATCTATCTTACGCAGAATTTATCG TAGAATCAGAATATCACATCCATTTGGTCTCAAATTTAATTGCTTTTTCG GAAATTGATTTTTCAGAGGCATGGTATATAAAATTTTTGAAAAAAAAATC AACGTTTTTTGTCATTTGCCCCTGGGAAGGCAAAGCGCAATTGCCGACCG TTTCCGTACGCCCAAGCGCCCATTTCGCGCCCCTAAAGCCTCCTTTTCGT GCAGATCCAATTTCGTGACTTTTCACACGGGATTGTTTTCAAAAATCGCT CTTAGAAAGCTCAACAGTCAGACCAAGCTGTATAATATTAGTGACTGAAG AAATCTCAAGAAATCTGACTGGTTAGTACTAAAACATGGGGAAACCAAGC TCTACTAAACGTGAAAGAGCTTCTGGTAATGCAGGTCGTTGCACAAAAGC AAGATCAAAGGCTCTTTATGCTCCAAAGAAGAAAACTTACAACTTCGAGA AGAAGCGACCGACTGCGACTACGGCTTCAAAATCGTCAATCGACAACACT TCAAACAAGGAAAGTGAACTTCCAGAGACTGCATCTAGCTCTAAAATTGG AAGTACAACTATACCTGAGACTCCTGAAAAATCAAGACCAACTGAAAATA ACAGCAGTACTACAAACCCTGGTCCAAAAATGATTCACGGCTACCGTTTT GTGGATATGACGATATTAGCGTCAATCTTCACCGTCCTTAGTTGCCCTGG ATGTAATGGTGTACGTTGTCTAAACCTCCATGAAAATGATGTTAAAAAGA AAGGACTAGCAAGCCATCTTGTTCTTCAATGCTCTGTGTGTCTTTATGAG CAATCATTTTTCACTTCGAAGCAAGTGCAATACCCGAATGAAGGACGCGG TGGTGCTAAATTCTTCGATGTGAATGCTCGGTCAATTTATGCTTCACGAC AAATAGGTGGAGGCCATGAACATTTGAAAAAGTTTTGCACTTACATGAAT ATGCCTCCACCAGCTCTTGAAGGAAGCTATAGCAAAATGACAAAGAAATT GAAGGAAGCGGCAAAAACTGTTGCTGAAAAAAGCATGTCTGATGCTGCCG CTGAACTGCGCGGGGAAGCAGAATCAGCTGACGTTGGCGTTTCTATTGAC GGGACATGGCAGAGAAAGGGATATACTTCCATGAATGGTGTTGTGACTGC TATATCAGTGGATAATGGAAAGGTTCTTGACACAGCTATCATGTCAAAGA ATTGTAAAGGCTGTACCAAAATGAAGTCTGTTAAAACCACTGATCCGCAA CGATATGACGCGTGGAAAGCTTCTCACAAATGTGGGCTCAATTTCAAAGG ATCTTCCCCAGCAATGGAAAAAGAGGGAGCAATAAACATTTACAATAACT CTACTAAGAAACATGGGCTATATTACACTTCATTTTTTGGTGACGGTGAT TCAAAATCGTTTACGGCGGTACAAAATACCTATGGTCCGCGCAAGCCTGT AAAGAAACATGAATGTATTGGCCACTATCAAAAAAGAGTCGGAACTCGTC TTCGGAAATTGAAGAAGTTAAACAAACGCCTAGGAGGTGCAGGAAGATTG ACTGATGCCAAGATAGATTGTCTCCAAAATTATTTTGGCATCGCACTGCG TCAGAATGTGAATAATCTTGACGAAATGGTGAAATCAACCAAAGCGTCAA TGTTTCATGTTGCGGGATACCATGACAACTGCCCCAATCATAAAGATAGC TGGTGTCAATACAATCTTGACAAATTAAATGGCACCAATTTCTACAAAAA GAAAGGCTTCCCTTTAGATGTACGTCAAGCAATTTTGCCAACCTACAATG ATTTATGCACACGCGAAAAACTCGAAAAATGCTTACACGGTCGTACTCAA AACGCAAACGAGAGTTTTAACGGTATGATTTGGAACCGCATCCCAAAAGC CAACCATGTGGGTTTACACATCCTCAGCTTTGCTGTCTATGATGCTATTT CTCATTTCAACAATGGTGGTATAGCAGCCTACAACATCTTAACTAAAATG AACATGGAAGCAGGAAAGTACACGGTCAAAGGTCTAAACCTTCAGGATTT GATCCGTAAACGACGGTCAGCTTACCGAATGTCTTCTCCCCAAACAAAGA GAAGAAAAGTTATCAGACACCTGAGAAAAACAAAACAAGACAAATTAATT GAAAAAGAAGGGAAAACTTATGAATATGGTGGCTTTGAATGTTGATTTAA TGTAGATTTGTAGAGACTTTATGTTTTTAGATTCAAAATATCAGTTATAA TTTTTAGCGCGTTTTCTTATTTTTGCAAGTTTTTTCAACACGGGTCGGGG CATAATTTCTGAACCGCTTTCTCAATCAAGCTCATTTTTTCAGTGAATGT TTATTGGAAATAAAAGGATGTTTTGGTTGTAGAGTTTTTTTGAATTTCAC CATAAAAAGTGTTTTATGTTTGAAGCAACTTTTGTATTTTTTTGTATTTT TTGCCGGTCCGAAGAGTTAAGCGGTCTGTTCTATGAGGTTCAAATTTCAA AATTTTAATTCACCCAAAACATGCATCTATATAAGGGTGATCAACTCAGA AAGTTTCATTGGTATATCTTTTTAACTTCTCCGGAAATTGACCGACCCGT GTTTGACCTATTTTGGCACTTTTCGGTGCACGGCTCCGGCCGCCATTATG GATTTTT

Coding sequence (CDS) from alignment at scaffold_407:97813..104269-

>TCONS_00064057 ID=TCONS_00064057|Name=TCONS_00064057|organism=Clytia hemisphaerica|type=CDS|length=1860bp|location=Sequence derived from alignment at scaffold_407:97813..104269- (Clytia hemisphaerica)
ATGGGGAAACCAAGCTCTACTAAACGTGAAAGAGCTTCTGGTAATGCAGG
TCGTTGCACAAAAGCAAGATCAAAGGCTCTTTATGCTCCAAAGAAGAAAA
CTTACAACTTCGAGAAGAAGCGACCGACTGCGACTACGGCTTCAAAATCG
TCAATCGACAACACTTCAAACAAGGAAAGTGAACTTCCAGAGACTGCATC
TAGCTCTAAAATTGGAAGTACAACTATACCTGAGACTCCTGAAAAATCAA
GACCAACTGAAAATAACAGCAGTACTACAAACCCTGGTCCAAAAATGATT
CACGGCTACCGTTTTGTGGATATGACGATATTAGCGTCAATCTTCACCGT
CCTTAGTTGCCCTGGATGTAATGGTGTACGTTGTCTAAACCTCCATGAAA
ATGATGTTAAAAAGAAAGGACTAGCAAGCCATCTTGTTCTTCAATGCTCT
GTGTGTCTTTATGAGCAATCATTTTTCACTTCGAAGCAAGTGCAATACCC
GAATGAAGGACGCGGTGGTGCTAAATTCTTCGATGTGAATGCTCGGTCAA
TTTATGCTTCACGACAAATAGGTGGAGGCCATGAACATTTGAAAAAGTTT
TGCACTTACATGAATATGCCTCCACCAGCTCTTGAAGGAAGCTATAGCAA
AATGACAAAGAAATTGAAGGAAGCGGCAAAAACTGTTGCTGAAAAAAGCA
TGTCTGATGCTGCCGCTGAACTGCGCGGGGAAGCAGAATCAGCTGACGTT
GGCGTTTCTATTGACGGGACATGGCAGAGAAAGGGATATACTTCCATGAA
TGGTGTTGTGACTGCTATATCAGTGGATAATGGAAAGGTTCTTGACACAG
CTATCATGTCAAAGAATTGTAAAGGCTGTACCAAAATGAAGTCTGTTAAA
ACCACTGATCCGCAACGATATGACGCGTGGAAAGCTTCTCACAAATGTGG
GCTCAATTTCAAAGGATCTTCCCCAGCAATGGAAAAAGAGGGAGCAATAA
ACATTTACAATAACTCTACTAAGAAACATGGGCTATATTACACTTCATTT
TTTGGTGACGGTGATTCAAAATCGTTTACGGCGGTACAAAATACCTATGG
TCCGCGCAAGCCTGTAAAGAAACATGAATGTATTGGCCACTATCAAAAAA
GAGTCGGAACTCGTCTTCGGAAATTGAAGAAGTTAAACAAACGCCTAGGA
GGTGCAGGAAGATTGACTGATGCCAAGATAGATTGTCTCCAAAATTATTT
TGGCATCGCACTGCGTCAGAATGTGAATAATCTTGACGAAATGGTGAAAT
CAACCAAAGCGTCAATGTTTCATGTTGCGGGATACCATGACAACTGCCCC
AATCATAAAGATAGCTGGTGTCAATACAATCTTGACAAATTAAATGGCAC
CAATTTCTACAAAAAGAAAGGCTTCCCTTTAGATGTACGTCAAGCAATTT
TGCCAACCTACAATGATTTATGCACACGCGAAAAACTCGAAAAATGCTTA
CACGGTCGTACTCAAAACGCAAACGAGAGTTTTAACGGTATGATTTGGAA
CCGCATCCCAAAAGCCAACCATGTGGGTTTACACATCCTCAGCTTTGCTG
TCTATGATGCTATTTCTCATTTCAACAATGGTGGTATAGCAGCCTACAAC
ATCTTAACTAAAATGAACATGGAAGCAGGAAAGTACACGGTCAAAGGTCT
AAACCTTCAGGATTTGATCCGTAAACGACGGTCAGCTTACCGAATGTCTT
CTCCCCAAACAAAGAGAAGAAAAGTTATCAGACACCTGAGAAAAACAAAA
CAAGACAAATTAATTGAAAAAGAAGGGAAAACTTATGAATATGGTGGCTT
TGAATGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040162XLOC_040162Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064057-exon-scaffold_407-1575043694:102390..104269TCONS_00064057-exon-scaffold_407-1575043694:102390..104269Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1575043694:101434..101757TCONS_00064057-exon-scaffold_407-1575043694:101434..101757Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1575043694:97813..100754TCONS_00064057-exon-scaffold_407-1575043694:97813..100754Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1510915933:102390..104269TCONS_00064057-exon-scaffold_407-1510915933:102390..104269Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1510915933:101434..101757TCONS_00064057-exon-scaffold_407-1510915933:101434..101757Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1510915933:97813..100754TCONS_00064057-exon-scaffold_407-1510915933:97813..100754Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1491911889:102390..104269TCONS_00064057-exon-scaffold_407-1491911889:102390..104269Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1491911889:101434..101757TCONS_00064057-exon-scaffold_407-1491911889:101434..101757Clytia hemisphaericaexon
TCONS_00064057-exon-scaffold_407-1491911889:97813..100754TCONS_00064057-exon-scaffold_407-1491911889:97813..100754Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064057-proteinTCONS_00064057-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:97813..104269 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.537254 0.51644 0.941052 0.649201 2.83531 2.23516 3.03529 2.79841 3.33845 1.78324 1.7345 2.16808 1.04531 1.90795 0.374971 0.454782 1.02363 0.974942 1.0965 0.850414 1.93361 2.10445 0.534949 0.647569 0.36301 0.546696 0.761602 0.78469 0.234385 0.361062
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064057 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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