TCONS_00064231 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064231
Unique NameTCONS_00064231
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2524

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064231 ID=TCONS_00064231|Name=TCONS_00064231|organism=Clytia hemisphaerica|type=transcript|length=2524bp
TTGTGACTTTCTTTATTATAACTTTCAACTGTAGGAATAATGACAGACAG
TCTCGTGCAAACAAAACTGCAAATGAGATCCTCGTTTCTGAAAAAGTATT
CGAATGTTTTAACACACTCAACGTTCGAATTtgattattcagaatatgag
ttCGAACAAAAAGCATGAAGaattattttaagattttgagagGTGATCAC
GTGTGCAATTTGGGAAGATGTTTGCGGGTTGTTTAAGAAAGTACCAATAA
ATAAATCCGGATTAAAATCCTGACTACATTGGCTGAACAAGagATGAAAC
AATAAAGAACATACAGACACGATAACAATGTTATCAGAAGATACCAAAAC
AAATtcagagaactttttaaaaaacggTGAAGTTAAAGAAATGAAGGATA
TCAAAGATGACCCATCAGCACTTCTTTCCTCTGTCGattcaaaaaatctg
aaaatcgaatCACTCAAAGAGCTATGTTCGACTGAAATGATGAAAGCTCc
gaagaaagaagagaaagttGAATCTAAAGACATGGCTGTCCAAACAGAAG
ATTGCTTGTGGCTCCAGGAACTTATCCAGAAAGTAGTTACTGTACGCGTC
AAAGCATACCAGAAAGCTGCAGAAAAATCTGAACGAATGGACGAAAAATT
ATCTCCTGTTTTGAAAAGGCTGAAGGAAGAAAATCGGGATCTTCGAGAAA
AAGCATCCGTTTTGAAACAGAAACTTCAAGCCATTGAAAGATACCAAAAT
TCTGCTAAAAAGCGCCCATCCAGTAACCCGCAACCTGTAGAAACTCCACC
TAAACGCATTTGTACTACAACAAAGAGTCCTGTACCAATAAATACGACGC
CGCCAGCACAATCAAACATCGGAAACATCAATAAAGTTCCAGTCACGTCA
CCTCAACCGGTTTCTTTCGCGTCTCCGGTGAGGTCTGTTTATATTCCACC
TGGACCAATTCAACACGCTCCTCAACAATTCTACCAGATCCTTCCTAATG
GGCAACGTATGTTATTACAATCGTTACCAACCCCGACAAACGATCCAGGA
TTTGTTATGATTGACCCGAACTCAAATAACGGACATTATAATATTGGAAC
TCAAGTAGTGGTCGCTAATCAAGGTCTACGCATGGCGTCTTCCCATCCAA
AGGACAATCGTGTGCAACAAATCGCTCAAGTCAATGGGAAAAATTTCCCA
GGAACATTAAACCCACTTCGACCGCCTATGAGTAGATTTCAAACGAACAA
TGTTCGTCTTCCTGTTAGTTGGTCAGCTCCGCCACAACAAGTCCGCCCTC
AAATGATGGTCGCCCAAAGACAACCAGTTCCGATACAGCAACCACAGAAA
GTACAAAAACCCGCCCTTCAGTCACTGCCAACTACAAAAACTCCACCCCC
TAAACCTCCCAATTCATCTGAAGCTCATATAGCACTACCATTTAACCCGT
TACCAAAACTAAAAGCCAGTATTTCTGCTTCAGGAAGTGGCATCATATTA
ACATGGGATTATGAAAAATCGGGTGAAAACCCAGATAAATATAAAGTTGA
GTGTTATCAGCTGTTTGCACATCAGGCAAAAGGTAATATACGGCCGCCCG
GCCCCAATGAGTCAAGACCGTGgaagaaaattggaaatgtCAATGCTTTA
CCATTACCTATGGCATGCACTTTGACGCAATTTGCAACAGGTAATGTTTA
TTATTTTGCCGTTGTTGCAGTTGACATACATGGACGTGAAGGAGAAATGT
CTAATCCTTGCACTATAAGATTAAATCTAAATTCGTAGTTTTGAAGTATT
TAACCAAATGTTGTTGAtatgtaccttaaaggaagaaattctggcggaaa
gaaaatttggcgaatttggcagattcggccagaatccgccaaattaagtt
cccgccaaaatttatttttttccgcaatccgccaaattaaattcccgcca
aattaaactttttgaaaatatgatctcttttaaggtgtttttgcattttt
tttgctgtttttacgccattttaaggataactttttcagcaaacgccaaa
tttagttttttcgtcaatccgccaaattaaattccctctaaaaaactttt
tcggccatccgccaaattaaattcccgccaaaatttcttcctttaaggta
ggtAATTGTTGATTGTAAAACATTTGAAgagttttgaattatttttcact
tATACAACAAGAACAGCTCAAATATTACAAAATTGGTTATGTTTGAGAAA
ATCTTCTTCGTCGTCACATCAAACCgattattttcttttgaaaaaggaat
ttcttttgttttcctatGAATTTTCTGTTCCACTGAAAAAGAGGaatcct
ttttttaaagaaaggcCACTTTGTCATTATATCTCTGTAATTATTCCTAA
AACTATTTATTATTTGtgtataatatttttaaaaacatttttgcgtTCCC
TTTTTTTTTACTCCATAGTGCATGCCATCATTAGTATATTGTTAATATTG
TTATGGAAAGTTAAAATATATTTA
Run BLAST on NCBI

protein sequence of TCONS_00064231-protein

>TCONS_00064231-protein ID=TCONS_00064231-protein|Name=TCONS_00064231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp
MLSEDTKTNSENFLKNGEVKEMKDIKDDPSALLSSVDSKNLKIESLKELC
STEMMKAPKKEEKVESKDMAVQTEDCLWLQELIQKVVTVRVKAYQKAAEK
SERMDEKLSPVLKRLKEENRDLREKASVLKQKLQAIERYQNSAKKRPSSN
PQPVETPPKRICTTTKSPVPINTTPPAQSNIGNINKVPVTSPQPVSFASP
VRSVYIPPGPIQHAPQQFYQILPNGQRMLLQSLPTPTNDPGFVMIDPNSN
NGHYNIGTQVVVANQGLRMASSHPKDNRVQQIAQVNGKNFPGTLNPLRPP
MSRFQTNNVRLPVSWSAPPQQVRPQMMVAQRQPVPIQQPQKVQKPALQSL
PTTKTPPPKPPNSSEAHIALPFNPLPKLKASISASGSGIILTWDYEKSGE
NPDKYKVECYQLFAHQAKGNIRPPGPNESRPWKKIGNVNALPLPMACTLT
QFATGNVYYFAVVAVDIHGREGEMSNPCTIRLNLNS
Run BLAST on NCBI

transcript from alignment at scaffold_41:584321..588584-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064231 ID=TCONS_00064231|Name=TCONS_00064231|organism=Clytia hemisphaerica|type=transcript|length=4264bp|location=Sequence derived from alignment at scaffold_41:584321..588584- (Clytia hemisphaerica)
TTGTGACTTTCTTTATTATAACTTTCAACTGTAGGAATAATGACAGACAG TCTCGTGCAAACAAAACTGCAAATGAGATCCTCGTTTCTGAAAAAGTATT CGAATGTTTTAACACACTCAACGTTCGAATTTGATTATTCAGAATATGAG TTCGAACAAAAAGCATGAAGAATTATTTTAAGATTTTGAGAGGTGATCAC GTGTGCAATTTGGGAAGATGTTTGCGGGTTGTTTAAGAAAGTACCAATAA ATAAATCCGGATTAAAATCCTGACTACATTGGCTGAACAAGGTGGGTTAG CTGAAACTTGAATTAGAAGATTGTCTGAAACCGACAAAGAATATCTCTCC ATTGTTTTCTCCTTTCGTATTGGAATAACTTAGCGATTCTTGAGTACATC CAGGATTGCAAATACTATAAATGAGAAAAGAGGCCTGGAAAAGAAAGAGC ATCGTCCGAGCCACGTCCGAGCCACGTCCGAGCCACGTGCACATAATCAA TTTTATGAATATACTCTGTCTCAACCCGATCTCGACAGGGAGCAAGCAAG ACCGATGATAATTCAACAACTCATTAGCTAAATTTAGCACCTAATGTCGT AACGTATCTCGACTACTATTTGCTAACATAGCATTGCATTTTTTTAATAA AGGAAAAGAACAAATTTTCCCTCTTCTGCGCCTCCTCTCCTTCTCCTACA CACATTTTGAGAAATTATTTTATTAATTCTGATTTGTCAGCATTAGAGGC GCGGCTCTTTCTATGCCATAAGAATAACTCCAGCAAAGCGCCATAAGACG AGATACAGTAACACAGTTATCTTCATTCATAAATATTTTTAATTAACATC CTCAAATTACCTTCAATCGAGATTTCCTTTGACAAAAGTTACCGTAATTG CTCCGGGAATCAATGAAACTTTTTTTCCCGCGTTTATTATATAATTTGTT ATGCACAAGCTATAATGATTGGTTTATTGTTTGTGCGCGCGTAAACATTT GAATTTAATTTCAATATCCAGGCAGGTATATTTGTTTGCCTCAAGAAGCA TTCCTTATTAACAGTTCTCATTTAATGCAATGGAGTCTCGTTAATTCCAA CACGCTTAGGGACCACAAACTTGTTCGAGTTAAGGAAATTTCGAGTTATG GGGTAAGGTTTAAGAGTTTTTGTTAACTGAAGGGACCATAAAACTTGTTC GAGTTAAGGAGATATTCGATTTATGGAGGTTTTAGTTAAAGAGACTTTAC TGATGTGTACTGTAACTATAAAAATGATTGATAGTCTGAATCGCACAATC GATCGCAGGTAGTGTGTCTTTGACGAGTAACAAGAATTCGTTAGTGGATG ACAGCAGCCTAAATGGTTACTTTCTGAACTTGGACAAATTATCTCGTCGA ATAATTTATTTTTTACGGATGACAAACAATTCCGCGTGAAATCCGCGAAA TTTAATCCCCGTGAAAATTAATCCCATTATAAAGTAATGTCTTTTGGGAC ATCGAAATGTCGTGAAAACTGTCATCATTTTAGATTTTCTATGCCACTTT TGTGTGACAATATTTTTCCTTTTACACCTTGCTTATAACAAAAACATCAT CTTTGTTGATTGACATTACGTAATGAGGTCAAGTTTTTTTTTCTTAGAGA TGAAACAATAAAGAACATACAGACACGATAACAATGTTATCAGAAGATAC CAAAACAAATTCAGAGAACTTTTTAAAAAACGGTGAAGTTAAAGAAATGA AGGATATCAAAGATGACCCATCAGCACTTCTTTCCTCTGTCGATTCAAAA AATCTGAAAATCGAATCACTCAAAGAGCTATGTTCGACTGAAATGATGAA AGCTCCGAAGAAAGAAGAGAAAGTTGAATCTAAAGACATGGCTGTCCAAA CAGAAGATTGCTTGTGGCTCCAGGTAATTAACGTTTGAATGGAATTAGCC TTGAAATTATATTACGTTTTTATTTTACGTTTTCCGCCCTGTATCGTTTG CTTTTTATTCTAAATGAAACACTGCATATAACTACTAAGGGTAGTTAAAC ATTTTACTGTTTTATATGGTACCAATTGAATAGGGAAAATAACAAATCAA TAAGTCGTTATTCCATCGTTTAATTACGAACAATATATAATTTAGAAACT TTTTTCTTAAACTTCAGGAACTTATCCAGAAAGTAGTTACTGTACGCGTC AAAGCATACCAGAAAGCTGCAGAAAAATCTGAACGAATGGACGAAAAATT ATCTCCTGTTTTGAAAAGGCTGAAGGAAGAAAATCGGGATCTTCGAGAAA AAGCATCCGTTTTGAAACAGAAACTTCAAGCCATTGAAAGATACCAAAAT TCTGCTAAAAAGGTAGGTTTTAAGACACGATGGTGTTCGTAAGAACACTT AATTTACATTGCATTAATGTCTAGTTCTTTCTAAAGAAAATTGCTAATGT GTTTGGAGGTATCAGTCTTATAAGGAAATCTTTTGTATTACATTTCAATC AGCGCCCATCCAGTAACCCGCAACCTGTAGAAACTCCACCTAAACGCATT TGTACTACAACAAAGAGTCCTGTACCAATAAATACGACGCCGCCAGCACA ATCAAACATCGGAAACATCAATAAAGTTCCAGTCACGTCACCTCAACCGG TTTCTTTCGCGTCTCCGGTGAGGTCTGTTTATATTCCACCTGGACCAATT CAACACGCTCCTCAACAATTCTACCAGATCCTTCCTAATGGGCAACGTAT GTTATTACAATCGTTACCAACCCCGACAAACGATCCAGGATTTGTTATGA TTGACCCGAACTCAAATAACGGACATTATAATATTGGAACTCAAGTAGTG GTCGCTAATCAAGGTCTACGCATGGCGTCTTCCCATCCAAAGGACAATCG TGTGCAACAAATCGCTCAAGTCAATGGGAAAAATTTCCCAGGAACATTAA ACCCACTTCGACCGCCTATGAGTAGATTTCAAACGAACAATGTTCGTCTT CCTGTTAGTTGGTCAGCTCCGCCACAACAAGTCCGCCCTCAAATGATGGT CGCCCAAAGACAACCAGTTCCGATACAGCAACCACAGAAAGTACAAAAAC CCGCCCTTCAGTCACTGCCAACTACAAAAACTCCACCCCCTAAACCTCCC AATTCATCTGAAGCTCATATAGCACTACCATTTAACCCGTTACCAAAACT AAAAGCCAGTATTTCTGCTTCAGGAAGTGGCATCATATTAACATGGGATT ATGAAAAATCGGGTGAAAACCCAGATAAATATAAAGTTGAGTGTTATCAG CTGTTTGCACATCAGGCAAAAGGTAATATACGGCCGCCCGGCCCCAATGA GTCAAGACCGTGGAAGAAAATTGGAAATGTCAATGCTTTACCATTACCTA TGGCATGCACTTTGACGCAATTTGCAACAGGTAATGTTTATTATTTTGCC GTTGTTGCAGTTGACATACATGGACGTGAAGGAGAAATGTCTAATCCTTG CACTATAAGATTAAATCTAAATTCGTAGTTTTGAAGTATTTAACCAAATG TTGTTGATATGTACCTTAAAGGAAGAAATTCTGGCGGAAAGAAAATTTGG CGAATTTGGCAGATTCGGCCAGAATCCGCCAAATTAAGTTCCCGCCAAAA TTTATTTTTTTCCGCAATCCGCCAAATTAAATTCCCGCCAAATTAAACTT TTTGAAAATATGATCTCTTTTAAGGTGTTTTTGCATTTTTTTTGCTGTTT TTACGCCATTTTAAGGATAACTTTTTCAGCAAACGCCAAATTTAGTTTTT TCGTCAATCCGCCAAATTAAATTCCCTCTAAAAAACTTTTTCGGCCATCC GCCAAATTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTAGGTAATTGTT GATTGTAAAACATTTGAAGAGTTTTGAATTATTTTTCACTTATACAACAA GAACAGCTCAAATATTACAAAATTGGTTATGTTTGAGAAAATCTTCTTCG TCGTCACATCAAACCGATTATTTTCTTTTGAAAAAGGAATTTCTTTTGTT TTCCTATGAATTTTCTGTTCCACTGAAAAAGAGGAATCCTTTTTTTAAAG AAAGGCCACTTTGTCATTATATCTCTGTAATTATTCCTAAAACTATTTAT TATTTGTGTATAATATTTTTAAAAACATTTTTGCGTTCCCTTTTTTTTTA CTCCATAGTGCATGCCATCATTAGTATATTGTTAATATTGTTATGGAAAG TTAAAATATATTTA

Coding sequence (CDS) from alignment at scaffold_41:584321..588584-

>TCONS_00064231 ID=TCONS_00064231|Name=TCONS_00064231|organism=Clytia hemisphaerica|type=CDS|length=4383bp|location=Sequence derived from alignment at scaffold_41:584321..588584- (Clytia hemisphaerica)
CGCCCATCCAGTAACCCGCAACCTGTAGAAACTCCACCTAAACGCATTTG
TACTACAACAAAGAGTCCTGTACCAATAAATACGACGCCGCCAGCACAAT
CAAACATCGGAAACATCAATAAAGTTCCAGTCACGTCACCTCAACCGGTT
TCTTTCGCGTCTCCGGTGAGGTCTGTTTATATTCCACCTGGACCAATTCA
ACACGCTCCTCAACAATTCTACCAGATCCTTCCTAATGGGCAACGTATGT
TATTACAATCGTTACCAACCCCGACAAACGATCCAGGATTTGTTATGATT
GACCCGAACTCAAATAACGGACATTATAATATTGGAACTCAAGTAGTGGT
CGCTAATCAAGGTCTACGCATGGCGTCTTCCCATCCAAAGGACAATCGTG
TGCAACAAATCGCTCAAGTCAATGGGAAAAATTTCCCAGGAACATTAAAC
CCACTTCGACCGCCTATGAGTAGATTTCAAACGAACAATGTTCGTCTTCC
TGTTAGTTGGTCAGCTCCGCCACAACAAGTCCGCCCTCAAATGATGGTCG
CCCAAAGACAACCAGTTCCGATACAGCAACCACAGAAAGTACAAAAACCC
GCCCTTCAGTCACTGCCAACTACAAAAACTCCACCCCCTAAACCTCCCAA
TTCATCTGAAGCTCATATAGCACTACCATTTAACCCGTTACCAAAACTAA
AAGCCAGTATTTCTGCTTCAGGAAGTGGCATCATATTAACATGGGATTAT
GAAAAATCGGGTGAAAACCCAGATAAATATAAAGTTGAGTGTTATCAGCT
GTTTGCACATCAGGCAAAAGGTAATATACGGCCGCCCGGCCCCAATGAGT
CAAGACCGTGGAAGAAAATTGGAAATGTCAATGCTTTACCATTACCTATG
GCATGCACTTTGACGCAATTTGCAACAGGTAATGTTTATTATTTTGCCGT
TGTTGCAGTTGACATACATGGACGTGAAGGAGAAATGTCTAATCCTTGCA
CTATAAGATTAAATCTAAATTCGTAGGAACTTATCCAGAAAGTAGTTACT
GTACGCGTCAAAGCATACCAGAAAGCTGCAGAAAAATCTGAACGAATGGA
CGAAAAATTATCTCCTGTTTTGAAAAGGCTGAAGGAAGAAAATCGGGATC
TTCGAGAAAAAGCATCCGTTTTGAAACAGAAACTTCAAGCCATTGAAAGA
TACCAAAATTCTGCTAAAAAGATGTTATCAGAAGATACCAAAACAAATTC
AGAGAACTTTTTAAAAAACGGTGAAGTTAAAGAAATGAAGGATATCAAAG
ATGACCCATCAGCACTTCTTTCCTCTGTCGATTCAAAAAATCTGAAAATC
GAATCACTCAAAGAGCTATGTTCGACTGAAATGATGAAAGCTCCGAAGAA
AGAAGAGAAAGTTGAATCTAAAGACATGGCTGTCCAAACAGAAGATTGCT
TGTGGCTCCAGCGCCCATCCAGTAACCCGCAACCTGTAGAAACTCCACCT
AAACGCATTTGTACTACAACAAAGAGTCCTGTACCAATAAATACGACGCC
GCCAGCACAATCAAACATCGGAAACATCAATAAAGTTCCAGTCACGTCAC
CTCAACCGGTTTCTTTCGCGTCTCCGGTGAGGTCTGTTTATATTCCACCT
GGACCAATTCAACACGCTCCTCAACAATTCTACCAGATCCTTCCTAATGG
GCAACGTATGTTATTACAATCGTTACCAACCCCGACAAACGATCCAGGAT
TTGTTATGATTGACCCGAACTCAAATAACGGACATTATAATATTGGAACT
CAAGTAGTGGTCGCTAATCAAGGTCTACGCATGGCGTCTTCCCATCCAAA
GGACAATCGTGTGCAACAAATCGCTCAAGTCAATGGGAAAAATTTCCCAG
GAACATTAAACCCACTTCGACCGCCTATGAGTAGATTTCAAACGAACAAT
GTTCGTCTTCCTGTTAGTTGGTCAGCTCCGCCACAACAAGTCCGCCCTCA
AATGATGGTCGCCCAAAGACAACCAGTTCCGATACAGCAACCACAGAAAG
TACAAAAACCCGCCCTTCAGTCACTGCCAACTACAAAAACTCCACCCCCT
AAACCTCCCAATTCATCTGAAGCTCATATAGCACTACCATTTAACCCGTT
ACCAAAACTAAAAGCCAGTATTTCTGCTTCAGGAAGTGGCATCATATTAA
CATGGGATTATGAAAAATCGGGTGAAAACCCAGATAAATATAAAGTTGAG
TGTTATCAGCTGTTTGCACATCAGGCAAAAGGTAATATACGGCCGCCCGG
CCCCAATGAGTCAAGACCGTGGAAGAAAATTGGAAATGTCAATGCTTTAC
CATTACCTATGGCATGCACTTTGACGCAATTTGCAACAGGTAATGTTTAT
TATTTTGCCGTTGTTGCAGTTGACATACATGGACGTGAAGGAGAAATGTC
TAATCCTTGCACTATAAGATTAAATCTAAATTCGTAGGAACTTATCCAGA
AAGTAGTTACTGTACGCGTCAAAGCATACCAGAAAGCTGCAGAAAAATCT
GAACGAATGGACGAAAAATTATCTCCTGTTTTGAAAAGGCTGAAGGAAGA
AAATCGGGATCTTCGAGAAAAAGCATCCGTTTTGAAACAGAAACTTCAAG
CCATTGAAAGATACCAAAATTCTGCTAAAAAGATGTTATCAGAAGATACC
AAAACAAATTCAGAGAACTTTTTAAAAAACGGTGAAGTTAAAGAAATGAA
GGATATCAAAGATGACCCATCAGCACTTCTTTCCTCTGTCGATTCAAAAA
ATCTGAAAATCGAATCACTCAAAGAGCTATGTTCGACTGAAATGATGAAA
GCTCCGAAGAAAGAAGAGAAAGTTGAATCTAAAGACATGGCTGTCCAAAC
AGAAGATTGCTTGTGGCTCCAGCGCCCATCCAGTAACCCGCAACCTGTAG
AAACTCCACCTAAACGCATTTGTACTACAACAAAGAGTCCTGTACCAATA
AATACGACGCCGCCAGCACAATCAAACATCGGAAACATCAATAAAGTTCC
AGTCACGTCACCTCAACCGGTTTCTTTCGCGTCTCCGGTGAGGTCTGTTT
ATATTCCACCTGGACCAATTCAACACGCTCCTCAACAATTCTACCAGATC
CTTCCTAATGGGCAACGTATGTTATTACAATCGTTACCAACCCCGACAAA
CGATCCAGGATTTGTTATGATTGACCCGAACTCAAATAACGGACATTATA
ATATTGGAACTCAAGTAGTGGTCGCTAATCAAGGTCTACGCATGGCGTCT
TCCCATCCAAAGGACAATCGTGTGCAACAAATCGCTCAAGTCAATGGGAA
AAATTTCCCAGGAACATTAAACCCACTTCGACCGCCTATGAGTAGATTTC
AAACGAACAATGTTCGTCTTCCTGTTAGTTGGTCAGCTCCGCCACAACAA
GTCCGCCCTCAAATGATGGTCGCCCAAAGACAACCAGTTCCGATACAGCA
ACCACAGAAAGTACAAAAACCCGCCCTTCAGTCACTGCCAACTACAAAAA
CTCCACCCCCTAAACCTCCCAATTCATCTGAAGCTCATATAGCACTACCA
TTTAACCCGTTACCAAAACTAAAAGCCAGTATTTCTGCTTCAGGAAGTGG
CATCATATTAACATGGGATTATGAAAAATCGGGTGAAAACCCAGATAAAT
ATAAAGTTGAGTGTTATCAGCTGTTTGCACATCAGGCAAAAGGTAATATA
CGGCCGCCCGGCCCCAATGAGTCAAGACCGTGGAAGAAAATTGGAAATGT
CAATGCTTTACCATTACCTATGGCATGCACTTTGACGCAATTTGCAACAG
GTAATGTTTATTATTTTGCCGTTGTTGCAGTTGACATACATGGACGTGAA
GGAGAAATGTCTAATCCTTGCACTATAAGATTAAATCTAAATTCGTAGGA
ACTTATCCAGAAAGTAGTTACTGTACGCGTCAAAGCATACCAGAAAGCTG
CAGAAAAATCTGAACGAATGGACGAAAAATTATCTCCTGTTTTGAAAAGG
CTGAAGGAAGAAAATCGGGATCTTCGAGAAAAAGCATCCGTTTTGAAACA
GAAACTTCAAGCCATTGAAAGATACCAAAATTCTGCTAAAAAGATGTTAT
CAGAAGATACCAAAACAAATTCAGAGAACTTTTTAAAAAACGGTGAAGTT
AAAGAAATGAAGGATATCAAAGATGACCCATCAGCACTTCTTTCCTCTGT
CGATTCAAAAAATCTGAAAATCGAATCACTCAAAGAGCTATGTTCGACTG
AAATGATGAAAGCTCCGAAGAAAGAAGAGAAAGTTGAATCTAAAGACATG
GCTGTCCAAACAGAAGATTGCTTGTGGCTCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040264XLOC_040264Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064231-proteinTCONS_00064231-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064231-exon-scaffold_41-1575043694:588294..588584TCONS_00064231-exon-scaffold_41-1575043694:588294..588584Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1575043694:586662..586937TCONS_00064231-exon-scaffold_41-1575043694:586662..586937Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1575043694:586223..586417TCONS_00064231-exon-scaffold_41-1575043694:586223..586417Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1575043694:584321..586082TCONS_00064231-exon-scaffold_41-1575043694:584321..586082Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1510915933:588294..588584TCONS_00064231-exon-scaffold_41-1510915933:588294..588584Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1510915933:586662..586937TCONS_00064231-exon-scaffold_41-1510915933:586662..586937Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1510915933:586223..586417TCONS_00064231-exon-scaffold_41-1510915933:586223..586417Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1510915933:584321..586082TCONS_00064231-exon-scaffold_41-1510915933:584321..586082Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1491911889:588294..588584TCONS_00064231-exon-scaffold_41-1491911889:588294..588584Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1491911889:586662..586937TCONS_00064231-exon-scaffold_41-1491911889:586662..586937Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1491911889:586223..586417TCONS_00064231-exon-scaffold_41-1491911889:586223..586417Clytia hemisphaericaexon
TCONS_00064231-exon-scaffold_41-1491911889:584321..586082TCONS_00064231-exon-scaffold_41-1491911889:584321..586082Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:584321..588584 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.08778 7.19414 4.97056 3.25504 1.91375 0.620636 0 5.97823 1.07086 3.89695 4.01719 3.95869 2.07368 0.490076 2.01454 4.17035 1.96956 1.33628 0.626197 1.805 1.3869 3.29406 2.87555 3.28085 0.558915 1.654 4.8971 3.14003 2.47786 4.81921
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064231 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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