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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064616 ID=TCONS_00064616|Name=TCONS_00064616|organism=Clytia hemisphaerica|type=transcript|length=883bp
TTTAGCTGAAACTTTTGCTGCTAAAAGGGTTAACATTGTACAATATTCTG
TTAATTCTTTAAttctttaaattcatttcagtGTGATCATAGTATAGTGT
GGTGTATCTTTTGTTTAGAAAAGTAATGAAAAActggaaattaaaaaatt
aaaaaattctaattgaTGGAGCTGCATGTCATGTATCTTTCAATGCCACA
CTGGATATTGTTTTCATCATCACTGATCAAAGTTGTTTGCAGTAATGGAT
ATGAATGAAGGATATAGAACGACCATAAGTTGCTGGAAATAATCAAGCTG
TTATTATGGCTGGAGAAATTCGTGGAAATCAGTAGGAAAGAAAAATGTAA
GTGGAtagttttgattaatttttttcatagagTCTCCCATAACTCATAAA
ACTAGAGGTATGCCCTAAAGTACCATTTTACCAAATTACCATATAAGTTG
GAGTTACCCAAAACAGGGGATGTAAGATGTGGAATCATTCATATACCAAA
AACACAAGAGTTCTTGTCACTTTTTATTCGGGTTGGTTGGTTTAAGAAAT
AGTGCCTTGGTGATCCTATGTTCAGACCTACTGGTACAAGGGCATAAAGT
TTAGGCGATCTCATGTATTATTTCCAGGGCAACTTAATAGGGTTAAAAAA
TCTATTGTTCAAAactattgttttgttttgaaagttaaTTATTGGTCACT
TATTGGTGTAATGCGTCCTTATCTGATTTTTtggacttacttacttactc
ttacttacttacttactcgTCCGTTCGTTTGTAGCTTTTATGCttgtcaa
ataaaaattttggacTTAATCTTTTGGCatgaattttcgtttttttttct
gaaattatcaTTATTGAATCCTTTCAAAGGTTT Run BLAST on NCBI transcript from alignment at scaffold_419:365102..365984 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064616 ID=TCONS_00064616|Name=TCONS_00064616|organism=Clytia hemisphaerica|type=transcript|length=883bp|location=Sequence derived from alignment at scaffold_419:365102..365984 (Clytia hemisphaerica)
AAACCTTTGAAAGGATTCAATAAtgataatttcagaaaaaaaaacgaaaa
ttcatGCCAAAAGATTAAgtccaaaatttttatttgacaaGCATAAAAGC
TACAAACGAACGGAcgagtaagtaagtaagtaagagtaagtaagtaagtc
caAAAAATCAGATAAGGACGCATTACACCAATAAGTGACCAATAAttaac
tttcaaaacaaaacaatagtTTTGAACAATAGATTTTTTAACCCTATTAA
GTTGCCCTGGAAATAATACATGAGATCGCCTAAACTTTATGCCCTTGTAC
CAGTAGGTCTGAACATAGGATCACCAAGGCACTATTTCTTAAACCAACCA
ACCCGAATAAAAAGTGACAAGAACTCTTGTGTTTTTGGTATATGAATGAT
TCCACATCTTACATCCCCTGTTTTGGGTAACTCCAACTTATATGGTAATT
TGGTAAAATGGTACTTTAGGGCATACCTCTAGTTTTATGAGTTATGGGAG
ActctatgaaaaaaattaatcaaaactaTCCACTTACATTTTTCTTTCCT
ACTGATTTCCACGAATTTCTCCAGCCATAATAACAGCTTGATTATTTCCA
GCAACTTATGGTCGTTCTATATCCTTCATTCATATCCATTACTGCAAACA
ACTTTGATCAGTGATGATGAAAACAATATCCAGTGTGGCATTGAAAGATA
CATGACATGCAGCTCCAtcaattagaattttttaattttttaatttccag
TTTTTCATTACTTTTCTAAACAAAAGATACACCACACTATACTATGATCA
CactgaaatgaatttaaagaaTTAAAGAATTAACAGAATATTGTACAATG
TTAACCCTTTTAGCAGCAAAAGTTTCAGCTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064616-exon-scaffold_419-1491911889:365102..365984 | TCONS_00064616-exon-scaffold_419-1491911889:365102..365984 | Clytia hemisphaerica | exon |
| TCONS_00064616-exon-scaffold_419-1510915933:365102..365984 | TCONS_00064616-exon-scaffold_419-1510915933:365102..365984 | Clytia hemisphaerica | exon |
| TCONS_00064616-exon-scaffold_419-1575043694:365102..365984 | TCONS_00064616-exon-scaffold_419-1575043694:365102..365984 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_419 | supercontig | scaffold_419:365102..365984 . |
Blast
The following BLAST results are available for this feature:
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