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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064620 ID=TCONS_00064620|Name=TCONS_00064620|organism=Clytia hemisphaerica|type=transcript|length=1199bp
ATTACTGACACATTAACTTGAATTTAGATAGCATAGAACAACTTTGTACt
gttggaattatatttttgagtagAATGATCtaaacagtttttttttaaat
atccttTTTTTTCAGATAGCCACGAGATCTGTGGATATGTTGTATTTGTT
GGACCtatcaaaaatagaaataatgATAACAAAAGCCCATACTTTGAGAT
GTACATATCCTGTGAATTTCATGAAGTGCGTATTGTATCATTTGTAATAG
ACGACCAACCAACTCTTTCTATCAACGTCAACAAAGGCTACTCCTTTCTA
GaccttgaaaaataaaaaccgaTGGAGCCTACAAGTACCACTGTTGGTCG
ACATTCTTTCAAAAGACACCTCAATTTGATTTGACAAGATTCACACAAGA
ACCACTTAGCATCAATGAAGCCCTTCAATTAGCATTATACTCGAGAGTAT
GTCTGAATGTACAGGTCAAAAAGCTGTGTAAGCAAGGCACAAGTCTTGAA
GGACTTAACTTTAAAGTTGTTGACATTGTTGACAACTCCATAGAAGTCGG
ACGAGAATTAACTGTATATGGTGGCTTAACACGTCAGTTGGAAGTTGGGC
GCAACTACCAGATCAATTACATCACTTTGACACGATATTCTGGCATCAAG
GTTTTTAAAACATCAGAAAGAAGTGAAATTGTTCAAATCAGCCAAGATGT
CATTGTTCTTAGACCCAATCAAACTGATAGCATCTCTGGAATTGTTAATG
GCGTATCAATGTCATCCTTGGATCCACGTTGCCAGTGTTCTCATTGTAAC
GATGGTGTCATTGTCGATGGTTCGGTTGCAATGTGTAACAAGTGCGATAA
AATGCAATCAGTGACATCCTTGATAAAAAACACATGATTCACGCTCACTG
ATTCTGTTAACAACTCCAGGAATTTGTTATGTGACAGCGAGATTGTCTCC
AACTTCATCAACATGTCTTTGGAAAACAAAATGCAAGcagttaaaatgtt
cttaaacaatTCCTTAACCGCCACCTTTGAAGTTGAAAATGGCCATGTCT
TGAAATTACAACCCATTGAAGAAGACGATATGTCAATTTTTTATGATTAG
CCATTGTGCTTCAAAGATCTGTATATGCGATGACTTTTCATTATCCGTAA
TGACAgttataatattttatttttaaatgtatATACTGATATCTTTCAT Run BLAST on NCBI transcript from alignment at scaffold_419:421356..422554 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064620 ID=TCONS_00064620|Name=TCONS_00064620|organism=Clytia hemisphaerica|type=transcript|length=1199bp|location=Sequence derived from alignment at scaffold_419:421356..422554 (Clytia hemisphaerica)
ATGAAAGATATCAGTATatacatttaaaaataaaatattataacTGTCAT
TACGGATAATGAAAAGTCATCGCATATACAGATCTTTGAAGCACAATGGC
TAATCATAAAAAATTGACATATCGTCTTCTTCAATGGGTTGTAATTTCAA
GACATGGCCATTTTCAACTTCAAAGGTGGCGGTTAAGGAattgtttaaga
acattttaactgCTTGCATTTTGTTTTCCAAAGACATGTTGATGAAGTTG
GAGACAATCTCGCTGTCACATAACAAATTCCTGGAGTTGTTAACAGAATC
AGTGAGCGTGAATCATGTGTTTTTTATCAAGGATGTCACTGATTGCATTT
TATCGCACTTGTTACACATTGCAACCGAACCATCGACAATGACACCATCG
TTACAATGAGAACACTGGCAACGTGGATCCAAGGATGACATTGATACGCC
ATTAACAATTCCAGAGATGCTATCAGTTTGATTGGGTCTAAGAACAATGA
CATCTTGGCTGATTTGAACAATTTCACTTCTTTCTGATGTTTTAAAAACC
TTGATGCCAGAATATCGTGTCAAAGTGATGTAATTGATCTGGTAGTTGCG
CCCAACTTCCAACTGACGTGTTAAGCCACCATATACAGTTAATTCTCGTC
CGACTTCTATGGAGTTGTCAACAATGTCAACAACTTTAAAGTTAAGTCCT
TCAAGACTTGTGCCTTGCTTACACAGCTTTTTGACCTGTACATTCAGACA
TACTCTCGAGTATAATGCTAATTGAAGGGCTTCATTGATGCTAAGTGGTT
CTTGTGTGAATCTTGTCAAATCAAATTGAGGTGTCTTTTGAAAGAATGTC
GACCAACAGTGGTACTTGTAGGCTCCAtcggtttttatttttcaaggtCT
AGAAAGGAGTAGCCTTTGTTGACGTTGATAGAAAGAGTTGGTTGGTCGTC
TATTACAAATGATACAATACGCACTTCATGAAATTCACAGGATATGTACA
TCTCAAAGTATGGGCTTTTGTTATcattatttctatttttgataGGTCCA
ACAAATACAACATATCCACAGATCTCGTGGCTATCTGAAAAAAaaggata
tttaaaaaaaaactgtttaGATCATTctactcaaaaatataattccaaca
GTACAAAGTTGTTCTATGCTATCTAAATTCAAGTTAATGTGTCAGTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064620-exon-scaffold_419-1491911889:421356..422554 | TCONS_00064620-exon-scaffold_419-1491911889:421356..422554 | Clytia hemisphaerica | exon |
| TCONS_00064620-exon-scaffold_419-1510915933:421356..422554 | TCONS_00064620-exon-scaffold_419-1510915933:421356..422554 | Clytia hemisphaerica | exon |
| TCONS_00064620-exon-scaffold_419-1575043694:421356..422554 | TCONS_00064620-exon-scaffold_419-1575043694:421356..422554 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_419 | supercontig | scaffold_419:421356..422554 . |
Blast
The following BLAST results are available for this feature:
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