TCONS_00064647 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064647
Unique NameTCONS_00064647
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1759

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064647 ID=TCONS_00064647|Name=TCONS_00064647|organism=Clytia hemisphaerica|type=transcript|length=1759bp
CCACTAAACAGACTAACAACTAACCACTAAAACGCTATCAATTTCAATCT
CCAGGATGAATATTCTACCAAAGAAAAGgTGGCATGTTCGTAATCGAGAT
AACAAAGAGCGGGTTCGAGAAGATGAAGAGAACGCACAACTTcaagaaaa
gaaagaacaagAAAGAATCGCTCTTGCAGAGCAAGAAGCCAGAATCTCAC
TCTTACGGAAGCGTCAAACAGAGGCGGCAAATTTGAAATGCCCTGATGAG
CATAACAAGCATCTTAATTTATTTGACATCAAAGAAAGTACGGGCAGTGA
CGTTCAAGAGCACAAACAAACAAACGCAGACTACATGAAAGAGAAACAAG
CCGAGAAAGAAAGTGaacacaaaaaaattggattGTTGACATACCTTGGT
CAAACTTctttggatgaaaaaagAGAGAATAGAACACCCTGGTATCTCCA
AAAATCACAAAGAAGCTCGGCAGTCAAAGAAGAACCTACTAAAGCGAAAG
AAGAAACGCACGCGGGTCAAAAGATTCGCATGGACCCGATGAGCGTTGTT
GAACAACATTTCAAACAGAAAGAAAgcaaacacaagaaaaaacataagaa
acacaaaaaatcacacaaaaaagAAAAATCTTCATCGAGCAAAACAATGG
AACAGTTAAGAGCTGAACGTTTACAGAGAGAATCCAGCGAACGGAGGCGA
GCGGAACAACTGCTGGATGGCTCCACGGAGGAAACAAATGAGGATGAACG
GTCTCAAGGTGACCAGAAAAGAAGGTACAACAGCCAATACATGCCACAca
tttcttcatcttcatctaaATCGAGAACAGAGCGTTGGAAACCTTATTGA
TGACAGCGGTGACGAAATGCTCGGTGATTTTGTAGTTAGCTTTAATTGTC
GGTGATGATAGGCTCTCCAAGCGGTCAAACTGGAGCGGATTTTTCAGgga
ttttcccatttttttcgagtttggtgcattatgggacatctgacaggaca
cattcatgacggctaaattaagcttctccaaaaaagtccaaaaataggTA
TGTTTATGGGGCGGAAgtacatgcagttttgaaaaaaccgaaaatgagcC
CCTTACGACCGTTGAGATGATCCGATGAAAAACTTGTAGAAGGATGGGTA
CAGTAAACAGaaatttttgaatgaatttgATGATAAGCACCACAGTGTAT
AATCGTCGTCAAAAGTTCAGTTCATTATATGTGCATGTACGCCATATGCG
TGTCCAGGATCTGCAATAGCTGTTGAAGAAAGCTATAACCAGAACCATTA
ATATTCCTTGCTGTCATCGAGGGCGCGTTAGATGAAGGTGGTAAGAGATG
CACATAGTTATTCTTTATCCAGAGATTATTTATGGAATATCTCATATAAA
ACAAACCAATATAATTGAATTGTATGTATGTTGATTGACTTGACAGTTTA
ATATCCACATTCGATATCAAAAAGGGGTCCGCCAGAACCCCTTGTTATTG
ATAGCAGAGCAGAAGATCCATATCTTAAAGGAGAGATGATAAAGGACAAA
GAATGATGATGCTTATGGCGTCTAAATCCATCCAACTGGAAGGAAGACAG
GAGAAACATTAAACCATCCGTTGTTTGTTCTTTACGGAGTGTTGatgaaa
taaattcttttggCTCGATTATCAAACTTCTTTAACGTCACAGATTTATT
TCGCAATTTTATTTGTCTTTCGCGAAgtgaccgtagtgcagtggtaaaGC
ATCCGGCTA
Run BLAST on NCBI

transcript from alignment at scaffold_420:287640..303245+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064647 ID=TCONS_00064647|Name=TCONS_00064647|organism=Clytia hemisphaerica|type=transcript|length=15606bp|location=Sequence derived from alignment at scaffold_420:287640..303245+ (Clytia hemisphaerica)
CCACTAAACAGACTAACAACTAACCACTAAAACGCTATCAATTTCAATCT
CCAGGATGAATATTCTACCAAAGAAAAGGTATACTTTTTTAGCTTTTGCC
TTTTTGTCTTTTATACCCCTTTTGCTAGACAGGCAAGATGTCATGTTcaa
ctttgaataaaattaaaaggCTGGCAAACGCGATATCATTACAgttgggt
tggtctaaaaagcagggtagccaattggggtagccaattgggctaggtta
tggggtacctaaatattttacagaccagaatagaaataccgaaaatgaat
NNggaggcttaaaatcgctaaaaaaagaaaccaatttaagaacaactgtt
gtttaatttttaagaactaataaacaaaggtaatatcaccgtctatcaaa
agatatttatttgattcttataaagcaaatgcttatataagaaaaatgaa
tatgcttatattgtgcgccatctcttgtttattttgtaagagttaattac
cgaaaggtatattaccgtctatcaagagttattgatttgattcttataaa
gtaaatgcttataagaaaaataaataaggtcatattgtgcgccatccctt
gtttactttgtaagaactaattaccgaaaggtatatNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtttgattcttataaagtatatgcttataagaaaaataaataaggtca
tattgtgcgccataccttgtttactttgtaagaactaattcccgaaaggt
atattaccgtctatgaAGAGTTatggatttgattcttataaagtcttata
ataaaaataaatatgctcatattgtgcgccatactttgtttactttgtaa
gaactaattaccgaaaggtatatcaccgtctatcaagagttattgatttg
attcttataaagtatatgcttataagaaaataaagaaaaaatcaaaactg
tggagctaaagacacaaagatatatgacgtaatccaaagaaagcCCGGGA
Aaagtccgtggttatacgagcgtgtaatttgtaaattaaatttagtgagt
tcgtccaccgtatcaagcactttcgttttctaattttttttccgatgaca
ccgccgccgccgcagaaaggctatcgtaaaactttcgctaagcgaaatta
acaaagatataaattaccacgtgttaatgcacgaggagtaagaaatagag
cttcgttataatagagctatttcaaaagactttttgtacctattacaagc
tgccatatttaaaaattttgaaaggaaataattgtttgaaacatctaaac
atgatttaaattaaacaatagattcaataacaaaggattgtatagatatg
acaagattagagatcatatggcccaaaggcgattccaaagctattatcat
caaattacagcttcacagaaataacaattaaaaacataaataaaatctaa
atctaaaatattaaaaactgttttgtatatattttttattcgggtcNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTcacagaaataac
aattaaaaacataaataaaatctaaatctaaaatattaaaaactgttttg
tatatattttttatttgggtctgtaaattttcaaacaaagccaagaagga
agacaaaatggcgccaggtctcttgagaagtaacaaagttcagtaccttt
ggaaaaaaggatattgtggctgaagttcaaaaggaatcttaaattttatt
acatggaatcattaacaagatgttgtaatagtatttccacatgaaaacag
gtttcagatttcaaaagtttaagcaaaaagaggtaccccaaaacctagcc
caattggctaccccattggctaccctgctttttaaaCCAACCCATTACAG
TTCAGGATGCaagacaaattttattttcaatctgcCCGTGACCTAGAAGG
GGGTCAAAAGGTAATTTAAAGTGAATAAAGAGTATGGAAAAACTAGGCTA
Cgccatatcttccttcgttttgagagtaaaactcctactcttcgggatac
gagcactgctcttgttttgaatattgaaattcttcgGATAGTATAAATCC
CAGTTTGCAGAGTGTAGCACGTTTGCTCAAGTGTCAAGATCTCGAGTGCA
CAACTTGGAAAAAGTCAAGTgcaggtgcaaaatttgaggtttttaGGTGC
AAGTGAAGTCATTTTTTATAACCCCAAGTGCAGAGTTTTGCTATTTTATT
CTCCTCAGCTCAGGTGCAGagctaattttagcaattttttgcctttttgg
gccaatttccgAGGTATATataggcagttagtcacactacagttagggaa
accatccagaatcctgccattctataagccagcaaaaaggTTAGCAAACA
ATACCAGGTTCTTCCTACAGCGAAATCTTGTCAAGAGTAACCCAGAAATG
CGgcttaaatgctttaaaatctTCGTAAGACCAACATTAGAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNATGCATCAACTGTTTGGGACCCAGCTGGAA
ATGAAACTTTAAAAGCTAAAATTGAAATGGTTCAGAGAAAGAGTTTGCGC
TGGATCTACAGCTCGTGGCATAAGACTGTAAGCCCAACAATGTTAAGAAG
AAAAGCTGACCTTGAAACTCTAGACGAACGTAGATGCAGAGCTCGGGTAA
AAATGCTACACGAAATATATCANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TTTTattaatcatattttttgttacattggcGAGAATAACTTTGTATAAA
GTTTTTGCTaatcaaataatagaaatagaaatagaaatagaaatagaaaa
aaactaaatgacacttttaaaattaagtttcttaggcggcaatcacaaat
atcttcatttcgcgtcctcgttgggtctaaaaagtgagtcggtcggacgg
tcggtcggtcgtaaaaattttcgggttttcttacctccatcatccatttt
tggagtgtattcttgaaggaaactgccagccagccagcaNTACCCACAAT
TGCGAATATAAACCTTTGTCAAGCTCTAACAAATTCACAACTCACTTCAG
TTTTTCTCAACTTCTCGAGTTTACTTTCCTTCGACTAACTATCAATGCCA
GATTACACCCTTTCCAATATACTGAGCCACGGAGGTAAAGTTTTTAGATT
AGTGgctaatatttttatctagatCTTTATATGTAcataataaattgatt
tttactATTTATTACTCATTATTTTATTATTNACGTGTTatgggtggttt
caaattatgacctttgaacactgtgacctccgaccAAAAATGgcacatgt
aatgataaacaaagtcaaaatgccgcgaatgcgctagaaatcactcgcaa
aaaatcggcaataataaaatttttgaacgaaggagaGAAAAAGTCCGCCA
ATattaccgactcaccgactcaattctactcaattttcgagagtcggtcg
ggcgacgcaaaacaaagatatttgtgattggcGCCTTACCATAtttccca
tcgaaaacaaccaaaaacattgctacttcccaaagcgggagaccaaaaca
aattatcttccaagattatggcgcccttttggatctattgttaaggccat
ctaaaatggtggaaagagttgcggaaagacagaggcgcccgctgcagctt
cgagggtggtaacgtcaaaacgcccaatatgatcttccaacagaaggcga
gttagttgccgcatgagttacgtcatgcactccacctcagcgcacaacga
acggtgtttcagtgaatatcaataattataagaatatcttatgtgcttaa
cttcAGTAAACCTCGAGTGCTTCAGGTTTTtcgacgcgaaaaaaaatttc
agccaattaaaagcacagagtatgcttatacttactttgtttgctacatc
gtctaggctaaaaaagtgagaaaagacacgaacgccattttttaatgagt
gctgttataatttttttgattgcgacCGCATAtatacaggaactcgccaa
atgttcctaactgcactagcgtcccgccaaaatgagtatcaaagattaat
gctacgaaagcgctatatcgtttacttgactctcaagcaaagaAATGCGC
TGCAAAACGggttattttaaaaagcatgGTACCCCAATAGGTGCACCAAT
TGGGGTACTAATTGGGGTATCCATTTAATTTACTGAccaggattttattt
tattttaaaaataaatgtagATTGATATaataataacatattatacAAAT
AATATAATATGCGTTTATAACATAATATTATGCTTGTTTGCTTTAAAACA
CGTGTTTGAGAGAATCAAGGACTACTTCCTAatgtcaattcatatccata
TATTTCCTGCATCATATTCGGTATAAATGTAATTCTTAATCAAAGTAACC
TTAGAACTATTGTATTTTATGATGTCTTTTTGGTAgtgataaaaatgaca
aatgaAAATGTCATTGCTTTTCTTGCTCTAaaagctattttacaaatttt
ccaaGTCTAAAATGACTGTTAATTTGTATCCTTTAGTACAATGAGCATCA
CCTTCAGTACAATAAATCTTTTTGGAGGAATTTGACTTACgattattata
tttcaatattttgtaaatatttttgcaagaaagtgcctttttttgtcaGC
ATTCTGACATGTACAAAGAAGAGATATTAATAAGATGTTACTAGCATTTA
GCAAGCACCTTACAATTCTCCTGAGTTTAAGCTATAATATGATGTTGGTT
ACTGGATTGGAATACTGTTTGGTTTGGTTACTGAATTTATTCTGGTCTTa
cttattctggtctgtaaatttttgaAGTANAGCTATAATATGATGTTGGT
TACTTGATTGGAATACTGTTTTGTTTGGTTACTGAATTTATTCTGGTCTT
ACTTATTCTGGTATGTAAATTTTTGAAGtaggaaagaaaaaaagcgAGAT
GGCGGCTGATTTAATTAAAAAGCATTAGATTTTCACTACCTGTCGGAGAA
CGGCAACTGTGACAAAAGTTTTGTGATAATCTTAAATCTAACTTTATCAA
ACCATCAATGAAAGGTTTTAGCACCATATTATAATGAAATTAAGTGTCAT
TTAACAAAATTAAGGGCGGAAAGTGGTACCCCAATAAGTACCCCAATTGG
TGCACCAATTGGGGTACcatgctttttaaaataacccctgcaaaacttct
aaagggattcatgaaaaaataacctggcgctttttaatgaaattaaaatt
tttaaaaactttgagaaattgcctaaaatttgagccatagatgaaaaaat
ttgagccaagccaaccttgaaaactaatttgaaagaagatcaacttccca
agaaaaagatctacaggggAGGCAGAGCCCACCTAGATCCGTGCACCGCC
GGATAGTCTATtttccggaaattttgccggacctctaacaatgacccatt
tacatgtgcagaattatttttactttagcgtatataaacaaggccttaaa
aatcgaagcgctgtctcgggaattgaatgacaaaatttggttggttgata
tttggctgctgcacgttcgcaatctgtcattttatctcattttaagtttt
caagttttaattgattgtctcgggatcttgaacttgattcaggtaactct
catccttgttgttgctgCAAATatatacatcctgtagatgactgatgttg
ttttttctgaaagcttgatttcctagtgtgactaactgatagGTGCACCt
tgttcggcccaaaatttatcaggtgcgCTTTTCCAGTGCGGAACTTGGTA
TTTCTGAATTTTTCCTCCAGTACTGCCTTGCCATCATACTCTGCAACCTG
GGATAAATCACATGCGCActgttttaatgaaacaatagagagtttcgaaa
cctaggCCAATCAGAGCTGTGttttaagcttttttatttgaaatctctat
tgataaacatctttcgtgaaagttgtctattatgtttaaacctattaata
agcaattctcAGTGAGGGTTACTTTAGGTATACAAAtttttgcgagcaga
aacttttgcaagGACTAAAAATCGTGAAATTCACGACGTctacttttgca
aatttaacagaaaatttttcgtgagcataaactttcgcgaatcaagacgt
ataTAAAactgagaattttcacatgaaaaaatggcttactGTAGAGGGAC
AAatatacttcttggattggcttgaaacatgttgacttattagtctttta
gctggctaaaagtttgaagttttacagattttctatttcgtCAAGAAtct
tttgcgagcataaacttttgcgaatggccctttctaacatttttaaagac
atttactttcgcgaaaagggccaaaattcgcgaaaatcgcaaaagtttct
CCTCAGGAAAGTATATACTAAGTGGGCGTCTacagcagtgcctatagacc
aaaaGTAAGggctaaaagcctggatctgtctattttGTAGACTAGGATAA
ACATGTTTATTTCttatttgatttaaatttttgcaGCAACCTTCTCAGGT
TGTCTCACTGAAAAAGAGTCATTTTTCATCTGGAGTAATCAGAGAGGAGT
AAAATGGGATAACTATATGAGCTAGGAGGAACCAAAGGTGttgattttga
tgtttctaatgtGACTGTGAAAGTTTTATCTCTCATTGAGTTTTAATGAC
ACTGGCAATTAATAAAGCAAATGCCGTActtaacaataataataatacct
AACAATCTAAACCCtcccttaacaatcaaaagagccaaaataacaaaaat
tcagATATTGCTGTGGTAAAACCTCTTTGTTGCAATAGGTAATTGTATGG
TATATATACAatacaaataaaacaaaattgcTCATAACTTTTAAAGTATA
TGATACTACTAGTTATTTTCACATATATTATTTATAAAACACTAGAAAGA
GCTACTCtattcaaaatttcagcccatgcaaacaaaattataaccAGTAA
TAAGGTCTCTATATGGGATATTTTTGCTACAGGTAGAGACAGAGGCCCTA
TCTAGTGTTTCTAGACAGatatcaatttttgatgaattaCTAGTTATACT
TTCAGCAGGTTTTACAGCTTAAAGTTACCTTTTTTTCAGTAATCGTGAAA
TTCCCAATAATTTGTCAGTTAATTATAATCATGTTTccattaatacaata
atgaccggttggtgagggctgtactgagaaatattgcccgaggtcaagta
acgaccgagcttgcgaggttgttgcgttgagcgagggcaatattttcagt
acagaccgaaaaaaccggtcattattgtatttgttaaccgtttccttcag
cttcaattgatttttagcgctttatccaggaaaaatagcgaaataaagcg
acaaaaacaagcgaaaagagataaaaaattgttataatttcggacgtcag
aaataaaaaatgagagaaatgatgtcaacgcattgttcattttcctttga
aaaagtgacgtcacaatgaattttcctaacgaagGGCAACTCTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGAACAATGTGTT
GACataatttctctcattttttatttctgacgtcagaaattatagcaatt
ttttatctcttttcgcttgttttttctgctttattttgctatttttcctg
gataaagcgctaagaatcaatcaaagttgaaggaaacggttaacaaatac
aataatgaccggtttttttcggtctgtactgaaaatattgccctcggtca
acgcaacaacctcgcaagctcggtcgttacttgacctcgggcaatatttc
tcagtacagccctcactaaccggtcattattgtattaatgtaggcccgtc
gtcatgcgaaaagaaccaattgcattgcgcaaaaagtcgtgtagcccgct
tcgaaaaagtaaccggttaacaactgaataataatgataataattttAGT
GATCTCAATCGATGAATTTGTTGTTGGTGACCTATTTAAAGTCCAAGTAA
AGTCCAGGATACATTTTACAATATTATGAATGACTATTTGGCCAGTTTCA
ATATATATCTGTGTAACGgtacaaaattttctttcttcaggTGGCATGTT
CGTAATCGAGATAACAAAGAGCGGGTTCGAGAAGATGAAGAGAACGCACA
ACTTcaagaaaagaaagaacaagAAAGAATCGCTCTTGCAGTAAGTGTAC
CTTCTGGCGAACTGAAAATTCACCTGGAATAGTCACCTCGCCTTACCTTT
TAAGTAAAAATAGGGCTTTCACTTAATAAGCACGTTTTCATTTATCCTGA
GTTTTATAGAAAATAACACTATGCTGTCATATATCCCCCAACACTGATGA
AACTATGGGTGGAAAGCTATTTTTGCAAAATGTAAAATATTATTAAATCT
AGTGAAATGATTATCATTTTAACACGAGTAATTGATTCAGACTTTAGTCG
ATAGAATTTTAAACCTCCACCTAGCCAGGAGACAGATTTTCTTTAGCTCC
TTTATGTTATTTGAATGAGCCCTTTATAAAATATTCCACAACAGCTTGCT
TTAGTCATAAAACAGGTCTCACAAAATATTATTGATACAGTAGTATTCCT
TGTTATTTTTGTATCTTCATATCTTCAGGAGCAAGAAGCCAGAATCTCAC
TCTTACGGAAGCGTCAAACAGAGGCGGCAAATTTGAAATGCCCTGATGAG
CATAACAAGCATCTTAATTTATTTGACATCAAAGAAAGTACGGTAAGAAT
TCACgtttattattttcttattttcatgttGGTTAATGACTGTTACTTAA
GTTAATCTTTTCTCTATAGTTTTAATGGGGGCGTTATTCTGCACTACTAA
GGTTATTGAAGGTTTTTAAAAGTTGGATCACAGTTCATTTTTTAGGGTAT
TGTTTTATCTCTCTAAATAATTTAGAAACTCGCAGATTaattccagcaaa
aaaaaagaaatttcgcCAATTTGATcatttcgaaaagttttttccCCTTG
AAGAGGATGGACATTGTCACATTTAATTTTAacacaaatttctttttcat
tcatgTACGATGCAGGGCAGTGACGTTCAAGAGCACAAACAAACAAACGC
AGACTACATGAAAGAGAAACAAGCCGAGAAAGAAAGTGaacacaaaaaaa
ttggattGTTGACATACCTTGGTCAAACTTctttggatgaaaaaagtata
atAACATAGATTTTACGAAATTTAGGGATAAGAGCTATGTCTAGGTAAGA
CTACTtaaatgggataaactttcgtggggattaaatttcgcggttgggcc
tatccgcgaaattcaaaaatttcgcggggacttaatttcgcgggtggcac
tattgggtggcaatatttccACGATTTTGTGGCTTTTACtgccaaatcat
gcatgttggttgttgaaatacacattattagcgctcctttgatgccagta
accattcaaaaagtatttatctgacattttttgagttttgtatagaaata
tttcgcggatgaggcccttccaaatttccattgggacttaatttcgcgga
ttttcgcggatgacacccaaatccgcgaaatttaatccccgcgaaagttt
atcccattaaagtatgaactttaagAAAACTCCTATCAGCGTTACGCTAA
ATAATTGACAGCATACGCAGTTTTGAATTCTTCGAAGTCTTTCCTTTCTA
AACAAGTTTTGGAACGATTTATTTGTTTAAAATGAGAGGATTTGGAGGTT
ATCATTGAGTTCTATCGgaggaaaataaaaatacacATGATACTTTCAAA
AGTGGCATCcacatttctttctttttataggAGAGAATAGAACACCCTGG
TATCTCCAAAAATCACAAAGAAGCTCGGCAGTCAAAGAAGAACCTACTAA
GTATGTCTCTTGTCTACGATTCAGTCATGGGTGCACAGTTGTCAATGTTC
CGTTCGGTTCTTAGATAACCGAGCCGACTGGCTGTGTGCCCTTTGAAATA
ATCGAAGATTATCTAAAACTCCTTGATTAGTGGGCTATTCTCGTAAAATA
TTGACTCCATCTATCTTTGTACCACTgcttaatttcaattttgggtGTTT
TTGACTGATTGGATATGATTTAATCGGAGAATTTGTGTTTTCTTCGAACA
TCTATTTAATCCAATGGCCATTAATGTTTAATTAATAGCCATTAATGGCC
TAGATTGCAAGATAATCTTGACGAGGGACCTTAAGTTGTTTGattcaact
tttttcttttttgagcttttttggaatttagtattttatttttcgaCTTT
AGAGCGAAAGAAGAAACGCACGCGGGTCAAAAGATTCGCATGGACCCGAT
GAGCGTTGTTGAACAACATTTCAAACAGAAAGAAAgcaaacacaagaaaa
aacataagaaacacaaaaaatcacacaaaaaagAAGTAAGTTTCAATTTG
TCTTTGTTCTGATATTAATCCAGAGAATAGTAAAAAAACCCTTAAAGGGA
TGGAGCTAGGACTCCTGAGACACCTTCTTTAAGCATAATCACacaatgaa
aaagaagactTGAACACTTTAAAAAACAGCTTTCGTGGTGCGTTCCACCG
TGTAGATAGAACATCAATAAGAAGTGATGGCCGAGCTATCAAGGCGTTTA
ATACCGCAAACATGTACGTCTCGGAATGAAACCCTGGTCTTTTGAAAGTC
TCATTCAGCTCATTTCGTTGATAGCCCAAAACTCTAGAACGTGGATCCTT
TGAAAACAATACAATAAAGACCATCACTGGGCTATCTACGTCAGCAAAGA
AAAATactgagaatttttttatccacCTTCTCATAGAAATCTTCATCGAG
CAAAACAATGGAACAGTTAAGAGCTGAACGTTTACAGAGAGAATCCAGCG
AACGGAGGCGAGCGGAACAACTGCTGGATGGCTCCACGGAGGAAACAAAT
GAGGATGAACGGTCTCAAGGTGACCAGAAAAGAAGGtatttctaaaattc
aaaactcAAAAGATCTCCAAATCCTTAATTTTCTAATTCGCCCGAAATTT
CTCTTTTATAAATATAGGTATTACCGAAAGAACGATTTGGTTTTTTTAGA
GAgtccatttctttgttttcccaTCTGTGGATTTAAAGAAATGGTTCAAT
ATACTTCATACCATATATGGAAATTTACgaggcactttcgatttggCAGT
TAAAAAATATATCGAAACGTTTTGAAACGTTATGAAAGATATATTccgtg
tttttatttttgaagaaaattccaTTCCAAAATTTCCTCATTAAGAATCT
TCTGTAGGCTCTCTAAACACGCTTTGTGAAACTGGCTCTTTGTGAGAACG
CCTCCGCGAATATTTTCTAAACAACAGGCATTTAATTACAAAACTTACAC
TTTTAATTGCTTTTTGACTGTCTATTATTTGATGATTATTTAATAATTAG
TAggaaaatattgaagaaaaaatttcccgGTCATAAAATTCGTTAACGGA
CGAATTTTATTTATGCATaagtaattatttcttttacTTAAGGGCtcgct
ctgaccatagtcattAAAAATTTGTTAAGAGTGTTAAGGGATctgaagat
aaaacttttgttttgttttgttttgacatttttaacaaaaaactggCTTT
ACTTTACAAAACGAATTACAAAAAAggcgttatgaactttaaaaggactt
taaccctttaactgtcggcatatgccgacatgagcattttcgatttcttt
gccgatgtcgggatttgccgacatgcgCACTTTCCATTCCTTTGCCACCA
AATTTAacacttctacaaagattttgtattagatggtttgaaatgaaaaa
agatgttagttaaaagcttttctatgttgaaaaataactattcaacaatg
ttcaactcaaaattatagtccttggctgatacttcatatattattcagaa
aatgaagtcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcgaaccttctt
tttttcccgtggcaaataggtcgaacctttttttttcccgcggcaaatag
gtcgaaccttaaaaaaaacgacgggcagttaaagggttaataaaatatta
ttattaccctcttttacaaaaaatgctaagtttcaatgggtaattaaaac
ctttttctttcgaaatatttttaaattgtccgtaaagaattgaattattt
tagatttttcggaaagaatttctaaattgatgtatcaaaaattatgactc
atttttgaccaaaaattgggatgaaaaattggtcaaaaagtttGATTAGA
AATACACCTTATaacgcaaaaatatttttgaaatgtttttctttcgccga
aaataagctcctcaaagttgaaatactcttctttgcaaatgtcttcattt
tcttcttcatcacaTTTTTTCATCGCGATTTGGCCGAACAGAAAACATAG
TTTTGCTGGTTATATCAGGCAGAAatctatattttgtacatggTAAATAT
GAAAGAAATTCACTATGGTTAGAGCCCTAGCAATTGTTCCCACTTTATCT
CAACCTTTTTCAGATTTCAttactttaacttttttaacTACAAATGTAAT
TTTACCGATAAGGTATGTTTTGGGGCAGAGAACTAAAACATTCGATATTG
TGTGAAATCAGgttaactttatttttaaaatttctactCTCTCTTCTGTA
GCCTGAAGTCTCTTCTGCATATCGTATTGAAAATTGTGTCACCCAGGCTA
ACtgtctttttagaattttcaccCTCTTCTCTGTATATCGTATTCAGTCA
GTCAATTAAAAAGTTGGGCATTGTGTGACCCAGTCTTTTAAAAATCTCGA
TTGTCTTTTGTTTGCAGGTACAACAGCCAATACATGCCACAcatttcttc
atcttcatctaaATCGAGAACAGAGCGTTGGAAACCTTATTGATGACAGC
GGTGACGAAATGCTCGGTGATTTTGTAGTTAGCTTTAATTGTCGGTGATG
ATAGGCTCTCCAAGCGGTCAAACTGGAGCGGATTTTTCAGggattttccc
atttttttcgagtttggtgcattatgggacatctgacaggacacattcat
gacggctaaattaagcttctccaaaaaagtccaaaaataggTATGTTTAT
GGGGCGGAAgtacatgcagttttgaaaaaaccgaaaatgagcCCCTTACG
ACCGTTGAGATGATCCGATGAAAAACTTGTAGAAGGATGGGTACAGTAAA
CAGaaatttttgaatgaatttgATGATAAGCACCACAGTGTATAATCGTC
GTCAAAAGTTCAGTTCATTATATGTGCATGTACGCCATATGCGTGTCCAG
GATCTGCAATAGCTGTTGAAGAAAGCTATAACCAGAACCATTAATATTCC
TTGCTGTCATCGAGGGCGCGTTAGATGAAGGTGGTAAGAGATGCACATAG
TTATTCTTTATCCAGAGATTATTTATGGAATATCTCATATAAAACAAACC
AATATAATTGAATTGTATGTATGTTGATTGACTTGACAGTTTAATATCCA
CATTCGATATCAAAAAGGGGTCCGCCAGAACCCCTTGTTATTGATAGCAG
AGCAGAAGATCCATATCTTAAAGGAGAGATGATAAAGGACAAAGAATGAT
GATGCTTATGGCGTCTAAATCCATCCAACTGGAAGGAAGACAGGAGAAAC
ATTAAACCATCCGTTGTTTGTTCTTTACGGAGTGTTGTACGTAACTACAT
TCNTAAATCCATCCAACAGGAAGGAAGACAGGAGAAACATTAAACCATCC
GTTGTTTGTTCTTTACGGAGTGTTGTACGTAACTACATGCATCCCCTTAA
TATTTATAATGGCTTCCTGTTGCTTGTGGTAGGGTTATAAATAACCATTT
TGTTGTTGGAATATTTTTTCTATCTCTTTCTTATTTTCAGGatgaaataa
attcttttggCTCGATTATCAAACTTCTTTAACGTCACAGATTTATTTCG
CAATTTTATTTGTCTTTCGCGAAgtgaccgtagtgcagtggtaaaGCATC
CGGCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040554XLOC_040554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064647-exon-scaffold_420-1491911889:287640..287717TCONS_00064647-exon-scaffold_420-1491911889:287640..287717Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:287640..287717TCONS_00064647-exon-scaffold_420-1510915933:287640..287717Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:287640..287717TCONS_00064647-exon-scaffold_420-1575043694:287640..287717Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:297130..297229TCONS_00064647-exon-scaffold_420-1491911889:297130..297229Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:297130..297229TCONS_00064647-exon-scaffold_420-1510915933:297130..297229Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:297130..297229TCONS_00064647-exon-scaffold_420-1575043694:297130..297229Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:297668..297781TCONS_00064647-exon-scaffold_420-1491911889:297668..297781Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:297668..297781TCONS_00064647-exon-scaffold_420-1510915933:297668..297781Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:297668..297781TCONS_00064647-exon-scaffold_420-1575043694:297668..297781Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:298105..298234TCONS_00064647-exon-scaffold_420-1491911889:298105..298234Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:298105..298234TCONS_00064647-exon-scaffold_420-1510915933:298105..298234Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:298105..298234TCONS_00064647-exon-scaffold_420-1575043694:298105..298234Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:298870..298939TCONS_00064647-exon-scaffold_420-1491911889:298870..298939Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:298870..298939TCONS_00064647-exon-scaffold_420-1510915933:298870..298939Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:298870..298939TCONS_00064647-exon-scaffold_420-1575043694:298870..298939Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:299342..299474TCONS_00064647-exon-scaffold_420-1491911889:299342..299474Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:299342..299474TCONS_00064647-exon-scaffold_420-1510915933:299342..299474Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:299342..299474TCONS_00064647-exon-scaffold_420-1575043694:299342..299474Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:299876..300024TCONS_00064647-exon-scaffold_420-1491911889:299876..300024Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:299876..300024TCONS_00064647-exon-scaffold_420-1510915933:299876..300024Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:299876..300024TCONS_00064647-exon-scaffold_420-1575043694:299876..300024Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:302057..302925TCONS_00064647-exon-scaffold_420-1491911889:302057..302925Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:302057..302925TCONS_00064647-exon-scaffold_420-1510915933:302057..302925Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:302057..302925TCONS_00064647-exon-scaffold_420-1575043694:302057..302925Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1491911889:303130..303245TCONS_00064647-exon-scaffold_420-1491911889:303130..303245Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1510915933:303130..303245TCONS_00064647-exon-scaffold_420-1510915933:303130..303245Clytia hemisphaericaexon
TCONS_00064647-exon-scaffold_420-1575043694:303130..303245TCONS_00064647-exon-scaffold_420-1575043694:303130..303245Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:287640..303245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.12346	2.36055	0.57422	0.000276632	0.421687	0.886022	0	0.507351	0.281662	4.7764	2.69228	0.98234	0	0.237322	0	3.51241e-09	2.92071	3.81786	3.77088	3.06241	2.98741	3.97722	2.16138	4.24274	2.2449	0.975742	3.06876	0.560675	0.969794	0.611493
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064647 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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