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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064819 ID=TCONS_00064819|Name=TCONS_00064819|organism=Clytia hemisphaerica|type=transcript|length=3124bp
GAACATGGCGCTGCGAGCATGTGATTGTtgctgaaaagaagaaaattata
gttttacaaaaatttttggtgTTCTTCAATGAAATGGCTGAAGAAGGAGG
AGCAGGAAATGGAACTAATAAAGGTGGTTTCAAACCTCCTACACTTGACT
TATCTGTGGATAGACATTATGCTTTCAAAATCTGGAAAGAAAAATGGGAT
GACTACTTGCTTTTGACTGATGGAGCTCAAAAACCAGCAGAATATAGAGC
TGCCATGATTAGATACTGTTTTTCTTCTGAGACAAGAAACATTTATGATT
CATTAAATTTATCGGAGGCTGAGAAGAGAAATCCTGAGACAATAATCGAC
AAACTTGAGCAATTTGCTAAGGGAGTCATCAACGAAACATTAGAACGACA
TAAAttctttgccagaaaacaggaaTCTGGTGAAAGTTTTGATGACTTTG
TGACAGAATTGAaacttttgagcaaaaattgtaACTTTTGTGATACCCCA
CAATGCTACCCAAGTTTACTTCGAGATCGAATCATCAGTGGAATTTCAAG
TGATGTTGTACATGAGAAACTGTTGGCTGAACGAGATTTGACGTTGGCGA
AGACACTCGAAATTTGTAAATCTGCAGAAACTGCATCCACTGGGATGTCA
ACCCTTCGAACCTCAAATACACAAGAACCTTCAGGAACTGCAGTAGACAG
GGTAGGAACTCAACATACtgatttttataacaacaataACAAGAGAAGTA
ACAATCAACAAACACGTCAATTTGGAGATGGTAAGAATCGAGTTAATTGT
AAATTTTGTTCACGAAACCATGAATTTGGTAGGAAAAATTGCCCAGCCTG
GGGTAAAGAATGCAGAGACTGTGGGAAAGCAAACCATTTTTCGAATAGCA
AAGTTTGTCAGGGAAAACAGGCTGGGGGAGTACACCAACAAGAGAATAAT
GAACCTTTAGATCTTTTCTATCTGGGGGGTATTTCAGCGGGTAGTGTCGA
GGGGGTGGACGAGGTTGAATCTGAAAGTATCCAAACATCAGTACAATTTA
TGCAAAATTGTTGGGAGACTGTTGTTCGTACCAAAGTAGGACAAGTACCT
TTTAAGATTGATACTGGAGCAGAAGTGACTGTAGTTGGTGAGAGACATTT
GAGTCCATTAGGAATAAACAAAGCTGCAATGAGATCAACAAATCGAAAAC
TTGTTGGTCCAGATGGAAAACCCTTGAACTGTATAGGGTTCATAGCAATC
AAAGTGTCATGTAATGAAATAACCGATGTATTGAATATGTATGTATGTGA
AAAAGTTCGAATACCGTTGTTAGGATTACCAGCTCTCAAGAAATTCGACG
TAGTACGACTTAATTCGAATAAGATAGACAATACCAAAGTTTCAGCAATA
TCGAATGACATTATTGAAAAGTATCCAAAATTGTTTGAGGGACTTGGTAA
AATTAAAGGTGAACCTGTTAAAATTGAATTGATGGAAAACGTAACCCCAT
ATCACATTAATGCACCAAGACGAATACCTTTACCAATGATGGAGCCAGTA
AAAAAAGAACTAGAGAGAATGGAATCCATTGGAGTGATTCGAAAAGTCGA
CAAACCTACAGCATGGTGTCATCCCATGGTAGCTGTCCAAAAACCAACAA
TACCAGGCCAACCAGCAAGATTACGAATTTGTATTGACTTAACACAATTA
AACAAAACAACGAAACGTGAATTTTACCAACTACCAAGTTGTGATGAGAC
ATTAGCTCAAATTGGAGACAACGGCAAAGTATTTTCGAAACTAGACGCAA
ATTCAGGATATTGGCAAATGCCTTTGAGCGAGGAGAGTCAATTAAAAGCA
ACTTTTACGACACCGTTTGGTCGTTATTGCCCAACTCGTGCACCGTTCGG
ATTGACATCAATGCCGGAGATATTCAGTAAGAAAATGGACGAAGTAGTAG
AAGGACTTGAAGGTGTGATTAAAAGTATGGATGATTTTCTAGTTTACGGT
AAAAACGTACAAGAACACGATGAGAATCTTGACAGACTGTTTAAAAAACT
TGAAGAATATAACGTTACGTTAAATGAACAAAAATGCAAATTTCGTCGAA
GCGAAGTAGAATTTCTCGGACATTTGATATCAGCAGAAGGTATAAAACCA
CTTGCATCAAAAATTGAATCAATCATTGAATTTCCAACACCGACATGCAT
CACAGAGTTAAGGAGTTTTTTCGGTATGGCCCAGCAATTGGCACGATTTA
GCCCAAAGTTTTCGAAAACAGCAGAACCGCTGAGAGATTTACTAAGCAAA
AAGAATGATTGGTTATGGACTCCAGTACACGAGAACGCTTTTCAGGAGAT
AAAAACTTTACTCTCTTCGCCACCAATATTGGCACATTACAATTGCAATC
GTGAGACGAAAATACGTACAGATTGTAGTAAAAAGAACGGACTTAGtgta
attttatttaaaaaatttgacaatGAATGGAGACTAGTCGATAGTGCTTC
GAGGTGGTTGTCACCTGAGGAAAAGAACTATTTCCCTATTGAAATCGAAA
TGCTGGGAGTCGCTTGGGGATGTGTTAAAATGGGAAAATATCTACAAGGG
TTGCCAAACTTCCTTGTAGAGACAGATCATAAACCGTTGATTCCAATTTT
GAACAGTATTAGACATGTCACCCAGAATTCAATTATTGAGAATGAGGTTG
CTTAGATTCAACTTCGTAGCAAGTCATGTGCCTGGTAAAGTTCTCCTTGA
TGCCCATGCTTTGTCAAGGGCGCCAGTTAGTCTGCCAGGTAAAGAAGACA
TGCTTGCAGAACAAGAAGTGACATCTTTTGTGAATTCCATCATCGACAAC
ATCCCAGCCACCCCGGGCAAAATCAACGAAATTCGTCACGAAACGGTTGG
CCGAGAACTTACAATGACTGTCCGGAGTCAATGCGAGCTTATTGGAACGT
TCGAGACCAAATGACATTAATCGACGGTTTATTTCTTAACGGAACAAGAG
TAGTCATACCTAAATCTCTACAGAAAAGTATTTTACAAACTATACATCAA
GGTCATCAAGGAATGGTGAAGTCCAAACGAATCGCCCGACAATCCGTTTA
CTGGCCGTATATCAATAGAGACAT Run BLAST on NCBI protein sequence of TCONS_00064819-protein >TCONS_00064819-protein ID=TCONS_00064819-protein|Name=TCONS_00064819-protein|organism=Clytia hemisphaerica|type=polypeptide|length=900bp
TWRCEHVIVAEKKKIIVLQKFLVFFNEMAEEGGAGNGTNKGGFKPPTLDL
SVDRHYAFKIWKEKWDDYLLLTDGAQKPAEYRAAMIRYCFSSETRNIYDS
LNLSEAEKRNPETIIDKLEQFAKGVINETLERHKFFARKQESGESFDDFV
TELKLLSKNCNFCDTPQCYPSLLRDRIISGISSDVVHEKLLAERDLTLAK
TLEICKSAETASTGMSTLRTSNTQEPSGTAVDRVGTQHTDFYNNNNKRSN
NQQTRQFGDGKNRVNCKFCSRNHEFGRKNCPAWGKECRDCGKANHFSNSK
VCQGKQAGGVHQQENNEPLDLFYLGGISAGSVEGVDEVESESIQTSVQFM
QNCWETVVRTKVGQVPFKIDTGAEVTVVGERHLSPLGINKAAMRSTNRKL
VGPDGKPLNCIGFIAIKVSCNEITDVLNMYVCEKVRIPLLGLPALKKFDV
VRLNSNKIDNTKVSAISNDIIEKYPKLFEGLGKIKGEPVKIELMENVTPY
HINAPRRIPLPMMEPVKKELERMESIGVIRKVDKPTAWCHPMVAVQKPTI
PGQPARLRICIDLTQLNKTTKREFYQLPSCDETLAQIGDNGKVFSKLDAN
SGYWQMPLSEESQLKATFTTPFGRYCPTRAPFGLTSMPEIFSKKMDEVVE
GLEGVIKSMDDFLVYGKNVQEHDENLDRLFKKLEEYNVTLNEQKCKFRRS
EVEFLGHLISAEGIKPLASKIESIIEFPTPTCITELRSFFGMAQQLARFS
PKFSKTAEPLRDLLSKKNDWLWTPVHENAFQEIKTLLSSPPILAHYNCNR
ETKIRTDCSKKNGLSVILFKKFDNEWRLVDSASRWLSPEEKNYFPIEIEM
LGVAWGCVKMGKYLQGLPNFLVETDHKPLIPILNSIRHVTQNSIIENEVA Run BLAST on NCBI transcript from alignment at scaffold_424:52516..55639 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064819 ID=TCONS_00064819|Name=TCONS_00064819|organism=Clytia hemisphaerica|type=transcript|length=3124bp|location=Sequence derived from alignment at scaffold_424:52516..55639 (Clytia hemisphaerica)
ATGTCTCTATTGATATACGGCCAGTAAACGGATTGTCGGGCGATTCGTTT
GGACTTCACCATTCCTTGATGACCTTGATGTATAGTTTGTAAAATACTTT
TCTGTAGAGATTTAGGTATGACTACTCTTGTTCCGTTAAGAAATAAACCG
TCGATTAATGTCATTTGGTCTCGAACGTTCCAATAAGCTCGCATTGACTC
CGGACAGTCATTGTAAGTTCTCGGCCAACCGTTTCGTGACGAATTTCGTT
GATTTTGCCCGGGGTGGCTGGGATGTTGTCGATGATGGAATTCACAAAAG
ATGTCACTTCTTGTTCTGCAAGCATGTCTTCTTTACCTGGCAGACTAACT
GGCGCCCTTGACAAAGCATGGGCATCAAGGAGAACTTTACCAGGCACATG
ACTTGCTACGAAGTTGAATCTAAGCAACCTCATTCTCAATAATTGAATTC
TGGGTGACATGTCTAATACTGTTCAAAATTGGAATCAACGGTTTATGATC
TGTCTCTACAAGGAAGTTTGGCAACCCTTGTAGATATTTTCCCATTTTAA
CACATCCCCAAGCGACTCCCAGCATTTCGATTTCAATAGGGAAATAGTTC
TTTTCCTCAGGTGACAACCACCTCGAAGCACTATCGACTAGTCTCCATTC
attgtcaaattttttaaataaaattacaCTAAGTCCGTTCTTTTTACTAC
AATCTGTACGTATTTTCGTCTCACGATTGCAATTGTAATGTGCCAATATT
GGTGGCGAAGAGAGTAAAGTTTTTATCTCCTGAAAAGCGTTCTCGTGTAC
TGGAGTCCATAACCAATCATTCTTTTTGCTTAGTAAATCTCTCAGCGGTT
CTGCTGTTTTCGAAAACTTTGGGCTAAATCGTGCCAATTGCTGGGCCATA
CCGAAAAAACTCCTTAACTCTGTGATGCATGTCGGTGTTGGAAATTCAAT
GATTGATTCAATTTTTGATGCAAGTGGTTTTATACCTTCTGCTGATATCA
AATGTCCGAGAAATTCTACTTCGCTTCGACGAAATTTGCATTTTTGTTCA
TTTAACGTAACGTTATATTCTTCAAGTTTTTTAAACAGTCTGTCAAGATT
CTCATCGTGTTCTTGTACGTTTTTACCGTAAACTAGAAAATCATCCATAC
TTTTAATCACACCTTCAAGTCCTTCTACTACTTCGTCCATTTTCTTACTG
AATATCTCCGGCATTGATGTCAATCCGAACGGTGCACGAGTTGGGCAATA
ACGACCAAACGGTGTCGTAAAAGTTGCTTTTAATTGACTCTCCTCGCTCA
AAGGCATTTGCCAATATCCTGAATTTGCGTCTAGTTTCGAAAATACTTTG
CCGTTGTCTCCAATTTGAGCTAATGTCTCATCACAACTTGGTAGTTGGTA
AAATTCACGTTTCGTTGTTTTGTTTAATTGTGTTAAGTCAATACAAATTC
GTAATCTTGCTGGTTGGCCTGGTATTGTTGGTTTTTGGACAGCTACCATG
GGATGACACCATGCTGTAGGTTTGTCGACTTTTCGAATCACTCCAATGGA
TTCCATTCTCTCTAGTTCTTTTTTTACTGGCTCCATCATTGGTAAAGGTA
TTCGTCTTGGTGCATTAATGTGATATGGGGTTACGTTTTCCATCAATTCA
ATTTTAACAGGTTCACCTTTAATTTTACCAAGTCCCTCAAACAATTTTGG
ATACTTTTCAATAATGTCATTCGATATTGCTGAAACTTTGGTATTGTCTA
TCTTATTCGAATTAAGTCGTACTACGTCGAATTTCTTGAGAGCTGGTAAT
CCTAACAACGGTATTCGAACTTTTTCACATACATACATATTCAATACATC
GGTTATTTCATTACATGACACTTTGATTGCTATGAACCCTATACAGTTCA
AGGGTTTTCCATCTGGACCAACAAGTTTTCGATTTGTTGATCTCATTGCA
GCTTTGTTTATTCCTAATGGACTCAAATGTCTCTCACCAACTACAGTCAC
TTCTGCTCCAGTATCAATCTTAAAAGGTACTTGTCCTACTTTGGTACGAA
CAACAGTCTCCCAACAATTTTGCATAAATTGTACTGATGTTTGGATACTT
TCAGATTCAACCTCGTCCACCCCCTCGACACTACCCGCTGAAATACCCCC
CAGATAGAAAAGATCTAAAGGTTCATTATTCTCTTGTTGGTGTACTCCCC
CAGCCTGTTTTCCCTGACAAACTTTGCTATTCGAAAAATGGTTTGCTTTC
CCACAGTCTCTGCATTCTTTACCCCAGGCTGGGCAATTTTTCCTACCAAA
TTCATGGTTTCGTGAACAAAATTTACAATTAACTCGATTCTTACCATCTC
CAAATTGACGTGTTTGTTGATTGTTACTTCTCTTGTtattgttgttataa
aaatcaGTATGTTGAGTTCCTACCCTGTCTACTGCAGTTCCTGAAGGTTC
TTGTGTATTTGAGGTTCGAAGGGTTGACATCCCAGTGGATGCAGTTTCTG
CAGATTTACAAATTTCGAGTGTCTTCGCCAACGTCAAATCTCGTTCAGCC
AACAGTTTCTCATGTACAACATCACTTGAAATTCCACTGATGATTCGATC
TCGAAGTAAACTTGGGTAGCATTGTGGGGTATCACAAAAGTtacaatttt
tgctcaaaagttTCAATTCTGTCACAAAGTCATCAAAACTTTCACCAGAt
tcctgttttctggcaaagaaTTTATGTCGTTCTAATGTTTCGTTGATGAC
TCCCTTAGCAAATTGCTCAAGTTTGTCGATTATTGTCTCAGGATTTCTCT
TCTCAGCCTCCGATAAATTTAATGAATCATAAATGTTTCTTGTCTCAGAA
GAAAAACAGTATCTAATCATGGCAGCTCTATATTCTGCTGGTTTTTGAGC
TCCATCAGTCAAAAGCAAGTAGTCATCCCATTTTTCTTTCCAGATTTTGA
AAGCATAATGTCTATCCACAGATAAGTCAAGTGTAGGAGGTTTGAAACCA
CCTTTATTAGTTCCATTTCCTGCTCCTCCTTCTTCAGCCATTTCATTGAA
GAAcaccaaaaatttttgtaaaactataattttcttcttttcagcaACAA
TCACATGCTCGCAGCGCCATGTTC Coding sequence (CDS) from alignment at scaffold_424:52516..55639 >TCONS_00064819 ID=TCONS_00064819|Name=TCONS_00064819|organism=Clytia hemisphaerica|type=CDS|length=2703bp|location=Sequence derived from alignment at scaffold_424:52516..55639 (Clytia hemisphaerica)
CTAAGCAACCTCATTCTCAATAATTGAATTCTGGGTGACATGTCTAATAC
TGTTCAAAATTGGAATCAACGGTTTATGATCTGTCTCTACAAGGAAGTTT
GGCAACCCTTGTAGATATTTTCCCATTTTAACACATCCCCAAGCGACTCC
CAGCATTTCGATTTCAATAGGGAAATAGTTCTTTTCCTCAGGTGACAACC
ACCTCGAAGCACTATCGACTAGTCTCCATTCattgtcaaattttttaaat
aaaattacaCTAAGTCCGTTCTTTTTACTACAATCTGTACGTATTTTCGT
CTCACGATTGCAATTGTAATGTGCCAATATTGGTGGCGAAGAGAGTAAAG
TTTTTATCTCCTGAAAAGCGTTCTCGTGTACTGGAGTCCATAACCAATCA
TTCTTTTTGCTTAGTAAATCTCTCAGCGGTTCTGCTGTTTTCGAAAACTT
TGGGCTAAATCGTGCCAATTGCTGGGCCATACCGAAAAAACTCCTTAACT
CTGTGATGCATGTCGGTGTTGGAAATTCAATGATTGATTCAATTTTTGAT
GCAAGTGGTTTTATACCTTCTGCTGATATCAAATGTCCGAGAAATTCTAC
TTCGCTTCGACGAAATTTGCATTTTTGTTCATTTAACGTAACGTTATATT
CTTCAAGTTTTTTAAACAGTCTGTCAAGATTCTCATCGTGTTCTTGTACG
TTTTTACCGTAAACTAGAAAATCATCCATACTTTTAATCACACCTTCAAG
TCCTTCTACTACTTCGTCCATTTTCTTACTGAATATCTCCGGCATTGATG
TCAATCCGAACGGTGCACGAGTTGGGCAATAACGACCAAACGGTGTCGTA
AAAGTTGCTTTTAATTGACTCTCCTCGCTCAAAGGCATTTGCCAATATCC
TGAATTTGCGTCTAGTTTCGAAAATACTTTGCCGTTGTCTCCAATTTGAG
CTAATGTCTCATCACAACTTGGTAGTTGGTAAAATTCACGTTTCGTTGTT
TTGTTTAATTGTGTTAAGTCAATACAAATTCGTAATCTTGCTGGTTGGCC
TGGTATTGTTGGTTTTTGGACAGCTACCATGGGATGACACCATGCTGTAG
GTTTGTCGACTTTTCGAATCACTCCAATGGATTCCATTCTCTCTAGTTCT
TTTTTTACTGGCTCCATCATTGGTAAAGGTATTCGTCTTGGTGCATTAAT
GTGATATGGGGTTACGTTTTCCATCAATTCAATTTTAACAGGTTCACCTT
TAATTTTACCAAGTCCCTCAAACAATTTTGGATACTTTTCAATAATGTCA
TTCGATATTGCTGAAACTTTGGTATTGTCTATCTTATTCGAATTAAGTCG
TACTACGTCGAATTTCTTGAGAGCTGGTAATCCTAACAACGGTATTCGAA
CTTTTTCACATACATACATATTCAATACATCGGTTATTTCATTACATGAC
ACTTTGATTGCTATGAACCCTATACAGTTCAAGGGTTTTCCATCTGGACC
AACAAGTTTTCGATTTGTTGATCTCATTGCAGCTTTGTTTATTCCTAATG
GACTCAAATGTCTCTCACCAACTACAGTCACTTCTGCTCCAGTATCAATC
TTAAAAGGTACTTGTCCTACTTTGGTACGAACAACAGTCTCCCAACAATT
TTGCATAAATTGTACTGATGTTTGGATACTTTCAGATTCAACCTCGTCCA
CCCCCTCGACACTACCCGCTGAAATACCCCCCAGATAGAAAAGATCTAAA
GGTTCATTATTCTCTTGTTGGTGTACTCCCCCAGCCTGTTTTCCCTGACA
AACTTTGCTATTCGAAAAATGGTTTGCTTTCCCACAGTCTCTGCATTCTT
TACCCCAGGCTGGGCAATTTTTCCTACCAAATTCATGGTTTCGTGAACAA
AATTTACAATTAACTCGATTCTTACCATCTCCAAATTGACGTGTTTGTTG
ATTGTTACTTCTCTTGTtattgttgttataaaaatcaGTATGTTGAGTTC
CTACCCTGTCTACTGCAGTTCCTGAAGGTTCTTGTGTATTTGAGGTTCGA
AGGGTTGACATCCCAGTGGATGCAGTTTCTGCAGATTTACAAATTTCGAG
TGTCTTCGCCAACGTCAAATCTCGTTCAGCCAACAGTTTCTCATGTACAA
CATCACTTGAAATTCCACTGATGATTCGATCTCGAAGTAAACTTGGGTAG
CATTGTGGGGTATCACAAAAGTtacaatttttgctcaaaagttTCAATTC
TGTCACAAAGTCATCAAAACTTTCACCAGAttcctgttttctggcaaaga
aTTTATGTCGTTCTAATGTTTCGTTGATGACTCCCTTAGCAAATTGCTCA
AGTTTGTCGATTATTGTCTCAGGATTTCTCTTCTCAGCCTCCGATAAATT
TAATGAATCATAAATGTTTCTTGTCTCAGAAGAAAAACAGTATCTAATCA
TGGCAGCTCTATATTCTGCTGGTTTTTGAGCTCCATCAGTCAAAAGCAAG
TAGTCATCCCATTTTTCTTTCCAGATTTTGAAAGCATAATGTCTATCCAC
AGATAAGTCAAGTGTAGGAGGTTTGAAACCACCTTTATTAGTTCCATTTC
CTGCTCCTCCTTCTTCAGCCATTTCATTGAAGAAcaccaaaaatttttgt
aaaactataattttcttcttttcagcaACAATCACATGCTCGCAGCGCCA
TGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064819-exon-scaffold_424-1491911889:52516..55639 | TCONS_00064819-exon-scaffold_424-1491911889:52516..55639 | Clytia hemisphaerica | exon |
| TCONS_00064819-exon-scaffold_424-1510915933:52516..55639 | TCONS_00064819-exon-scaffold_424-1510915933:52516..55639 | Clytia hemisphaerica | exon |
| TCONS_00064819-exon-scaffold_424-1575043694:52516..55639 | TCONS_00064819-exon-scaffold_424-1575043694:52516..55639 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_424 | supercontig | scaffold_424:52516..55639 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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