TCONS_00064886 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064886
Unique NameTCONS_00064886
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1324

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064886 ID=TCONS_00064886|Name=TCONS_00064886|organism=Clytia hemisphaerica|type=transcript|length=1324bp
ctccAATCTTCAAATGAAATTGGGTCCTTACACTCAAGAGAAAGTATTAT
GTAGTTCTTGAAATGTTAAATATAACCTTGACACTGCTCTTTGTACTTCT
TAGTTTCTCATCACTTGAACTAACCTGCTGCAGAGCAGATTTTTATCAGC
TTGTGGATGGCAAAACATTACCTGAAAATGACCTTCTCCATAACGACACA
GAAGTGATAACATCCATCAGTCGAATTCAATGTGCCTTGAGATGCTCAAG
ACAAAAAACCATCTGTCAAACGGTTCTATATGATGAAGAGAATCGaaaat
gtattttacagactgtgAAGTCGACACAAAAATCACACGGATACAATACA
TGGAATACACTCCAAATACTAAAAGACCAGCCGAGCCCTGCAGAAGTGAA
GCCCGTTACCTCACTTCCAGAAGAAAGAAGTTGTTATGAACTGTTGCAAA
AATATCCGAGCCTTCCATCTCAAGAATATAACATCAATTTCAACGGAACC
GAAGTTTTTGTTTACTGTGACATAACGCAAGGTCAAGGTGGCTGGACGCA
AATCGCAAACATTCGTCAAATCAATCAACAAAGCTTCTCTTTATCGTCAA
TCCAAGTGGACACGCCAGGTGAACTTTCCGATCGCTTACTTTCGGGAGAA
AACTATGCTCTCTCAGCTCAAGGTCTCCGAGATCTCGTCAACTCAACAGG
AGCTAGACAACTGCGTGTTTATTGCTCCAAACCATCCGTTGGACGAACTT
TCCACATCGAATCTCGAGATAATGCAATCGGAGACCAAATCCTTGAATAC
TTTTCTGATGTTACGGCAACCGAGCTACCAGATGGTGCCGACTCTTTTGA
TACCTTACCTGGTGACACTTCCTACCTAACTTCACATGTTCACGAGTGGC
GATTTCAAAGCGGGAAATGGGGTCATGGCACCATTAAAACTCAGCCCatg
aaattatacaaaaatctagTGTACATAAGtgactctaaaacaccaccCTC
TTATGTTTATAAGGTGGGAATGAATTCAACTCCGAAGTTATATTGTGACG
ATGATGGAACTTTGAATAGCGGAGAATGGAAATACTTCATTCGATGACGG
ATAGATTATTTGTGTAATATAGACCGCACAACATATAGCTTAGtgtaaac
ataattttttatgacgctgagtccagtgagtCTGagtcacagatatctgt
aaagcccgaagggctagatttgcagctttgttcaaaaagtgaagctcatc
tttggaaggatttcctaccagagtcacgtgactaaaatatgcaatttcac
cggtttgagagatgtgaaatagcg
Run BLAST on NCBI

protein sequence of TCONS_00064886-protein

>TCONS_00064886-protein ID=TCONS_00064886-protein|Name=TCONS_00064886-protein|organism=Clytia hemisphaerica|type=polypeptide|length=344bp
MLNITLTLLFVLLSFSSLELTCCRADFYQLVDGKTLPENDLLHNDTEVIT
SISRIQCALRCSRQKTICQTVLYDEENRKCILQTVKSTQKSHGYNTWNTL
QILKDQPSPAEVKPVTSLPEERSCYELLQKYPSLPSQEYNINFNGTEVFV
YCDITQGQGGWTQIANIRQINQQSFSLSSIQVDTPGELSDRLLSGENYAL
SAQGLRDLVNSTGARQLRVYCSKPSVGRTFHIESRDNAIGDQILEYFSDV
TATELPDGADSFDTLPGDTSYLTSHVHEWRFQSGKWGHGTIKTQPMKLYK
NLVYISDSKTPPSYVYKVGMNSTPKLYCDDDGTLNSGEWKYFIR
Run BLAST on NCBI

transcript from alignment at scaffold_425:322652..335126-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064886 ID=TCONS_00064886|Name=TCONS_00064886|organism=Clytia hemisphaerica|type=transcript|length=12475bp|location=Sequence derived from alignment at scaffold_425:322652..335126- (Clytia hemisphaerica)
CTCCAATCTTCAAATGAAATTGGGTCCTTACACTCAAGAGAAAGTATTAT GTAGTTCTTGAAATGTTAAATATAACCTTGACACTGCTCTTTGTACTTCT TAGTTTCTCATCACTTGAACTAACCTGCTGCAGAGCAGATTTTTATCAGC TTGTGGATGGCAAAACATTACCTGAAAATGACCTTCTCCATAACGACACA GAAGTGATAACATCCATCAGTCGAATTCAATGTGCCTTGAGATGCTCAAG ACAAAAAACCATCTGTCAAACGGTTCTATATGATGAAGAGAATCGAAAAT GTATTTTACAGACTGTGAAGTCGACACAAAAATCACACGGATACAATACA TGGAATACACTCCAAATACTAAAAGGTTAGTTTAGTAAGTCATATAACTA ACAATCATTATTTATTTGATATGAATGATGCCGTGATGAAATGGAGTATT TCCTAGAAATTCCATTACTCCTTCGCCAGATAGCTTTTAAGTTGATTCCA TTTTAGGGGAACACCCGCTTTTCAATTGCTATGAATAGCTAGGGTAGATT GGGCTTTTCCAGAAAAAAACCGTATGTTCCCCTGTTGAGGAGGTCTATTT CCGTTCTTCCGTTCCAAGGGGGTAAGATTTGATTTGATAAGTGGCAGAAT TCCATAGGGTGCAAATAAAGGAAGTGTCTGCATTTTCTGGTACACAGCAC GTGGCATTAGTGCTCATAAATTGATGCATTGATGCGTACGGGAGGAAGTT GTTGTGCGATTTCTGTGAGGGAATGGTCAGAGAACATTCTGTTTGTGGTT GTGCTCTCGTGTAATGAAATACAAAGGGGACGAGGTTGAGTTTTTAGCTC TTATTTGATTTGGTTGGTCGTTAACCAGTAATAAAACAATTTTGTTATAT TTTCTAAAGAACGCGTCATTTTTGGCCCAGCGTTAGCGAACGGGCCTTTC AAAAGCAACTGTCTGTTTGTCCGTCCCACTTTCGTTTTCGTTTTTACAAA AACCGCGCTCCTTCTAAATTGTAGACTAGCAAGTGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGCAAGTG TCCGTATTGCGTATTGTATTCAGTGAAGGGAGTGAGTCTGTTGCAAGCGG AGCTGCAGAGTGAAATACAACGACTAGTTACTAGTCTATCTAAAGTTGTT GTTGTTGTAAATATCGCGCTCTTTGCATTTTATAGCTCAAAATGGCGGAT TAAGTGGAGACAAAGTTTTGTTCTCCTCCTGAAATATCAGACCAACTCTG ACATTTTCAGACGCTGTTGTTTCATTGATTGTTGCTGTTTACAGATTTAT TGATATACAATCGTTATTTTTCGTGATTATTCATCCTTTTACTGTGCTGT TTGCTGCTTGCTCATTTGTAAAACAAGAGGTATGTATTTTTTTTGGAATA AAATTTTTCAGATCGAGTAGAATAGGCCACAAAACGTCTAATCCTGACCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTTGCGCACAAATTCGCAACTTTAAAAGTACAGTTT TGAATTAGCTTTGATAAAAAAACTCTTTTTTCATTGGCCAGCGCACTGCC TTTTCTTACAAAATGTTTGGAATTCATTGCGTCTTTTTTAAAACTTTTGG AACTAATTTTCACGATTTTTCTCAAAAATTATTATTGTAATTTTTATGTG TTACACCAGGATCAACTGTGAAAATTTTAGAATTGAACTAACCGCAAAAA TTAATTCCCGCAAAATGCAATTTTTCTGATTTTTTCACGGACCGTGAAAA TTAGTTCCCTTTAAGGTGGTTCGCAGACGATATCATACTCCAGGATGCAA GTGAAATTTTTCAATCCGCGGACCTAGACGGGGGTTCGGTTATTATCAGT TAGGGTTAGGGTTGGAGCTCGAGAGTCANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAC TTAGGATCCCGTAGGGATCCTTGTAGGGGCACCGGTAGGGTTGGGAGCTT TCTTAATTAAGGTCTGTAAATTACACGCTATAAGTATTTGTGAATGACAG CCTTCTGTCGTGTCTCGTTGGCATAAGCGGTTAGGCATTGGGTTTGTAAA CCAAGGTTGCTTGCATTTGGTGGTTCGAGCCGGGGTCGGAGACCTGTTTC ACCGGTACGGGCAAATTTCAGAAAAATACTNNNNNNNNNTAAGAAAAAAA GGCCAGGAAAACTTTTCATACAGTAATTCTGCTCAGATTTTAACTGTTTT CATGGAAAAAAGTTCCCAGTAAGTAAATAGTCAAGAGCTTTCTCGTAAAT GAAATTTATTTTTATCAGCATGTGTCATGAATTTGACTGGCTTTTTGTGA TTTTTCTTTAATAACTTTGCATGTAAATATTTTCTTTGACTAATTAATTT CCAATTGATATGATGATGAATAGTATACATCTTTANTCAGAAAAATACTT AGAAAACAGTTAGAAACACTTGAGAAAGACAGAAAATCAGAATAGAAGAT AGGAAAGTAGAAAATAGGGGGGAAATAAGAGACGATGAATCCTGGAGTAT GATATCGTTTGCCAACCCTTTAAGGTACATAGAATAAACATAGCAGAAAT ATTATTAGAATAACCTTTCATCTGCTTGTATCATGGTTATAAAATTGGTA AATTTTCAAATTCTTTGATGTTAAATTGATATTTCTTCTTTTCAGCTTGA AAACCAACTGCGTGGACAACTCTGGACCAGTTGTCATCTCTGTCTTACCC ATCATTATGACTGATTTATTCAGGTTGGTACTTACTGAGATAGAGGGGGA ATCGAAAGCATAGGTCTAACTTGACATNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNATTACTCGGAATTACTAGATTGCATGGAA TTACTAGATTACTCGGAATTACTAGATTACTCGGCTAATCAAAACTTGCG ACATTATCAGATTACTCAGCTTACGAAAGCGACTCAACTTACTTAACTTA CTCTTCATATTCAGCTCACTTAATATTTATCTACTAGTATCGAAATTTAA ATAAAGAAATTTGAATTAAAAACCTATTTTACATTGGAAAAACAAACTTT ATTTTATATATAATAGGAAAAACAAACTCTATTTTGCATAGGAAAAACTA AACTTTATTTTGCATAGGAAAAACTAAACTTTATTTTACATAGGAAAAAC AAACTGTATTTGATCAGGGGTTATTAGAGACAATGGAGTGTTTGAAATTT TTTCTTTGTTTATGAAATGTTATTTCTTAATTACATGCATTTTCTGTTGA AAACAATTTTTAACTTGAGAATCAACTTTTAGACCTTTTATTGCATGTGT CATAAAAAGCTAAAATAGTTAATTTTTTTGTAAATTAATGTCCCAAGAGA ATATAATTGGCTTTCTTTTGCAGATGACAATAAGAATTTTGCACTTCACT TAGAAGCTTTTTGAAAACACACTTCACACAAAATCTCTCTAAACGTAACA AACACTACTATCGTCAGCTACATAAAGAAGTAGGGTTAGGTACAGGCTAA GGAAAAACCAAACTTTATTTTACATTGGAAAAACCATATACACAAAAAAC CGTTATATTTAAAGGTTATGTACTATAGGTTATGTACTAACATAANNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA ACAAATATTTTGGATTTCTCTCTGTTTTCTATCAAAAATTGCTTCACATT TGTATCTATTCAATACGAAAGAGCTTGTAATCTAAAAAAGCTGAGTTAGC AAACAAAATCATTATACCTAACTTTATACTTTGCATAGGAAAAACTAAAC TTTATTTTACAAAAACCAAACGTTATTTTATAAAAGAACTATTGAACAAA AAATTATACTCTGTTGTTGCATTTGATATAGGTGATGCCCATCGTCTCGT TTATTGTTGCCCCAGCTAACCCCCGTCTTTGTATTTTTCTTTTTTGATTA TGCAACATTGTAGAGCATTGTACGATGACCCCTAACACGTTTTTACTACT TTTCGCTTTTGCTGGGCCTTCACGCCCAACGGGCTACTTGTTATTAGTTC AAATGAACAATTATTAAAGTATCTTATAAAAACTCCATCTCATCTGATAC AAAGATTTGGATCGAGAAATTTGTCATTCGAACGTGAACCAAACCTCTTT TAAAGGATTGATTTCATTCATCATTAAAACCAGTAAAATGGAGGGTGATT TCTCTCTTTTCTAAAATTATGTTTTGCTTTATTTTTCAATGCTTTTTTAT AAAAAAACTAATACGAATTGGGTGCACCTCTATCACTTCTAATCTCGAAC CAAGAGCAAATTTCACAACTTTCGACTCCACGGATGGGCGTAGGTACAAT CGTTTCGCGAGTGCTGCCAGAATCTAAAAGAAACGACGCATAAAGGTTTC GAGTTTGTCTCATTTTTAATTATACCAACAATTCATAATTTGATTTATAT CTGATTTATAACTCCCATTCAAAGAGAAAATTGAATTATCTTTTGTCAAT AAAAGTGTTCCTCTTTAGCAGAACAGTATATTTTTTTGTGTTATCTATAA AGCGAGTGGTTGTCGAAACTAGGAAAACGTCAACTACCCCCTAATGACGT CCTAAACTACACTTTGTTCATATATTTTTTTCAAAAAAAAAATAATACTT TTGCCGAAATTTGATGGCTTAGTCAATTTTCGCTGATGTCTTCCCGTTCA AAAATCTATAAATTGCCACTCGAATCCATTCACATTCAAAATACTTTAGA CCTACAAAATATCGCGAGAACAAAATTTTTGTAACTTTGAGGAAAAATAT TTTTCGCACCATGTAAATTTCAACAAGAAATGCTTAATATCATGGTCAGG GAATCTTTTGACGGCTTTACTACTGTCTAAAGTCAAGCGCTCTTTCCAAT GCATTATCTCCGGAAAGGAAACACTTTTTTCATATTCAAAATAAACATAA TTATCTCCGGAAAGGAAACACTTTTTTCATATTCAAAATAATCATAGATC ATTATTGCTTTTCAGGTAAAAAGTTCTAAATTAACCAGCAAACAAAATTA TACTTTCAAAACATTCTTAAAGCTTTTGGAACGATGAATACTCGTCAAAG TGTAATTCTGCTCGTAGTCCTGGCGATTCAGTTGGAATTGATCCAAGGTT ACTGCACACCAAAAAACAAATATTGCTGGCCATCAGAAAATGTCTGGCAA CTTCGTCTTGGTAGCCGTTTAGATGGAAATCTTCATAAATTTGATCCATT CGTACTTTTACAATGTCGAAATATAAACAGTTCAATGGTGCTTGGTGAAT CTGCAAATGGCGCTTGTATGCAGATTCCAGAATGCTCAAAAAGATTTTGT CTGGCCGACCAACCTTCCAATCTCCCATCATACAGTGTTGAAGCAAAAAC AACAAGAGATGTTGTTCGTGCTTTCAAATTTGCCAACAGATTCAATATTG CAGTCACCGTGAAAACGACCGGTCATTCTTTCTCTGGATCAAGTTTCGGA CGCGATACTTTAATGATCTGGATGAGAAACTTTCAAAAATTTGGCGATAT TTCAACAACTTACGAAGATTCCTGTCACGTGAAGTATNACCGGTCATTCT TTCTCTGGATCAAGTTTCGGACGCGATACTTTAATGATCTGGATGAGAAA CTTTCAGAAGTTTGGCGATATTTCCACAATTTTCGAAGATTCCTGTCACA TAAAGTACCCAGCATCCATCAAAATTGGCGGAGGTCAAATTTGGTCCGAA ATCTACAGTAAAATTGCCGGTACCGAGTACAACATTATGGGAGCTTTGGC ACCAGTTGTTTCTGCAGCAGGTGGCTGGTTACAAGGGAGTGGTTTATCTC CTTTATCTCGTCAACATGGTCTTGGTGTTGACAATGTGATCAGCTTCAAA GTGGTTCAACCAAATGGATGTGTTGTCACAGCTGATGCATGTCGAAACAA AGATTTGTTTTGGGCGTTACGTGGTGGAGGAGGCGGCGCTTTTGGCGTGG TTGTATCAACACAATATCGTCTCTTACCCAAGAAGCCTATTACTTTTCTC GCATTCTTTTTATCTCCCGTTGGAATTCCTTTTGAAGTTTTCCTCCATAT GGCACATAGTTTTATGGACTTTTGGGCTGTAAAATCAACAACGCTTGACA ACCGATGGGGTGGATTATGGAACGGCACCTCACTGCAATTACTTTTCGAA GGAGAAAGAAACGAAGCAAATTCAACCCTCATTGAAGAGCTCAATGCTTG GAAGAATAAGTTCGACAAAGCCTACCATAATAATATCTTCATCATAGCAC AAGATTTCCCTGGCATTTCAGAAGCGAATGTCATCCTTGGTCAGTTCCTT CAACTCGATAATACGGAAGGAGCCACGTTTACGCGGGATATAGCAAATCG TTTGATCCCAAAGAAATGGATTGAAAAGAATCCCACAAAAGCTGCTGATC TTTTGAAAGCTCTTTTCCAAACAACACTGGAGACTGGAGCAATCACTTCA AATTATATCGTAGGAGGGGTTATCAGTGAAGTTCCTCATAAAGCTACTGC TGTCAGTCCGAAAATTCGTGACGCACTTTGGCAGATTGGAACATATGGAG ACACTCTCTTGAAAGTCATCGATCAAGAATTGCCAGGACTAGGATCAGGT TACAACCATGGCAGCAAAACGGAATCTGATTGGCGCAAGAAGTTTTGGGA TTCGAATCTTTCTCGATTACAAAGATTGAAAAGAAGGTTCGACCGTTGCA ACCGTTTGAATTGCTGGCATTGTATTGGGTACAAAGGAACTGAGATTTAA ATGATTGAAAAACTATTGAAAGAATTATAATGGATTAGCTCAGAAATATT CAAGTTTCTGGAATCTTATTTTACTACTACTTTATTTCGACTGATTATTG ACCGTCAAATTTTACATCCATAGGCTAATGATCTTTTTATTTTTCTAATT TTTATTTAATTTTTTTTTAAATACAAGTGAAACAGAAGAAATGCCTTTTT CGTATTAAAAAAATTCAGAAAACTGCTGCTTTCGCATAAACTCTGAAAAA TGTTAACGTTTTGATAGAGCTAAACGCAACAAAAGACACGACAAAAGACT TCTTTCAACAGTCCGTTGTTACTGATCAAAATAGTGCTGTTAAACATTTC CTGTGTCAAAAATGATGACCAGATAAATTTTACGGATCTAATTTATTATC AATGCAATTAAAAAACCTTTTCTAATTATCTTAAAAAGGTAAAATGATCT TTACATAACGTCTCGATTAATTAAATGAAATTGTTACAAATAGTTGGTAT ATTACCAAAATTGCCTTTTAAGCAAAAAACTAAACAACTACAATAAAAGT TACAAAGATTTGATAGTTTCATATTTTCCAAACATGCAAGCCAATAGTTT TTCAATCATTTAAAACTCAGTTCCTTTGTACCCAATACAATGCCAGCAAT TTAAACGGTTGCAACGGTCGAACCTTCTTTTCAATCTTTGTAATCGAGAA AGATTCGAATCCCAAAACTTTTTGCGCCAATCAGATTCCGTTTTGCTGCC ATGGTTGTAGCCTGATCCTAGTCCTGGCACCAGTTGATCGATAATCTTTA AAAAGCTGTCATCGAAAGTTTCAATCATCCAAAGGGCTTCTCTTAGTTTT GGACTGACTGCCGTGTCTTGATGAGGAACGTTGCTTACAGCACCACCTAA GATATAACTAGACACGAATTTTCCAGTTTGGAGAGTCTCTTTAAAGAGAC GTTTGAGGATTCCTGCAGCTGCTCGTGGGTTCTCTTTGATCCATTTCTTT GGAATCAAACGATTGCCAATATCCTTTGTAGAAGAAGCAATTGCTGTATT ATCGAGCTGAAAGAACTGTGCGAGAACTCTGCTGGCTTCTGAAACCCCAG GAAAGTCTTGTAGCAGTATGAAGACGTTCTGATGAAAAGCTTCGTTGAAT TGACTCCTCCAGGCGAAGAGGTCGTTAATCAGTGTAGCTTCAGCTTCTTT TCGATCTCCTTCAAAGAACAATGCAAGCGAAGTACCGTTCCATAAACCAC CCCATCGGTTGTCAAGCGTCGTCGATTTCACCGCCCAAAAGTCCATGAAA CTATGCACTATTCTCAAGTATTGTTCAAAAGGGATTTGGATTGGAGAAAG TCCAAGTGCGAGAAAAGTGATTGGCTTCTTGGGTAAGAGACGATATTGTG TTGATACAACCACGCCAAAAGTGCCGCCTCCTCCACCACGTAACGCCCAA AACAAATCTTTGTTTCGACATGCATCAGCTGTGACAACACATCCATTTGG TTGAACCACTTTGAAGCTGATCACATTGTCAACACCAAGACCATGTTGAC GAGATAAAGGAGATAAACCACTCCCTTGTAGCCAGCCACCTGCTGCAGAA ACGACTGGTGCCAAAGCTCCCATAATGTTGTACTCGGTACCGGCAATTTT ACTGTAGATTTCGGACCAAATTTGACCTCCGCCAATTTTGATGGATGCTG GGTACTTTATGTGACAGGAATCTTCGAAAATTGTGGAAATATCGCCAAAC TTCTGAAAGTTTCTCATCCAGATCATTAAAGTATCGCGTCCGAAACTTGA TCCAGAGAAAGAATGACCGGTCGTTTTCACGGTGACTGCAATATTGAATC TGTTGGCAAATTTGAAAGCACGAACAATATCTCTTGTTGTTTTTGCTTCA ACACTGTATGATGGGAGATTGGAAGGTTGGTCGGCCAGACAAAATCTTTT TGAGCATTCTGGAATCTGCATACATGCGCCATTTGCAGATTCACCAAGCA CCATTGAACTGTTTATATTTTGACATTGTAAAAGTACGGATGGATCAAAT TTATGAAGTTTTCCATCCAAACAGCTACCAAGACGACGTTTCCAGACATT TTCTGATGGCCAGCAATATTTGTTTTTTGGTGTGCAATAACCTTTGATCA ATTCTAACTGAATCGTCAGGACTACTAGTAAAGAAATAATTGAAGAACTT CGAAGGTTCATTGTTAGCACTGACTTCTTAAACTTCTGAATGAAATAACT GACTGGAGTGAGCTCGTTTTATACCTGTTTAGCGAAGTAATTAGTACTGT TTCAATGCACGTAAAAATAGTTGATTCAATTTGTGCCAAAAAGCAATTAC CGATATAATGATTCGATAATAAAGAGCTTTCTTGATTAGGACAAACCTAC GTTTTTGCAACAAGATTACTTTCGCTTTTTAAACCGTAATTAGTGCTTTT TATTTTTAAGCTGATAATTTTCTCAAGAAGCTCAAATTTCAATCAAAGCG TACTCTTTGTGTTTCACACACACGAAACTTGCTTTCGGTAAATTTTAGTT TCGTAACGTTTTATTCAATGTGGGGTCTAATGATGTCGGATTGTGTCCAT ATTAACACACCCCTCCCTCATCACGATCACGAAAATTGCCTTTCAATTCA TCTTTTTTTACCACGCACAAAATAGCGCAATTCATGATATGCACCATTGC AATGTCTTCCGTTCCACCCAATAGCTGATTGGTTGAAAGTGACGTACTGA CTGCTTTTACGTCACTTCCAACCAATGAGCTATTGGTTCCATGACGTAAT GTCAGAAGACATTGCAGTGGTGCATATCATGAATATACAGTTGAATGGCT CTCTCTCTAATTCAGTCTTCGTGGGATCAAAAATTTCCTTTGGATTAGAG AAAGATTCGAATTACAGAGAGTAATTTAAACCACTTTCCAGCTGAGGGGA TCAATATTTCATTTCGAATTACAAAAAGTGAGTGTACACTTTCTTGAACT CAAGATTTTGCAATAACAAAAGATCCACAAACCCAGGTTTAACAAATTGA CAATGAAAGCTCTTTTTAAATGTAGATTCTACTTCGCTTAGAGACTCACT GTGTGTCTAGCTTGTAAATATTTATAATAATAAAACTATTTAGGGAAAGA AACTTTCACTTAATTAATGTATATCAATCCTATTAAGAATCAGGTTTGCC AAAAATATCAGCGTGTAGAGAAATTAACAACAATGAAGTAAATTATTCTT TAACTTCGATCAATAGACCAGCCGAGCCCTGCAGAAGTGAAGCCCGTTAC CTCACTTCCAGAAGAAAGAAGTTGTTATGAACTGTTGCAAAAATATCCGA GCCTTCCATCTCAAGAATATAACATCAATTTCAACGGAACCGAAGTTTTT GTTTACTGTGACATAACGCAAGGTCAAGGTTAGCTTGTTTTTTTTGTTGT GTCATTTTGCTAAACTCTTCTTTCAAACAAATAATAACTCCAGGTGACAA ATCAGTATAATAGAGAGGGATAAGTTATGATTCAAAAAACATTCCGACAA ATATTTTTCAGCATAAGAGGGATAACTTAAAAGCTTAAGAATTGCGTTTC TTTCACAATTTTTTAACCCTATCGTAGGCTTTTAGGGGTGGTTCAGAACT TTAAGGAGGGGGTTCCTGTACCACGCCTTAACTTCTGATATAGTTGGTCT TTTTGGATGAAATTTGGTACACAATATGTAATGAACACCTCCCCCAACTT GTTAATTTTTCGATATTTCCCACCCCCCATACCTGATTAGGACCCTTTGC TTATTAATTTTTGAAAATATTTTCAGTTGTCAAAAGATGAGTCCCATATT TTTCTCTGAATAAATAGCCAAGTTCTGATTTTTGAAAGGTATTTAGAGAT ATAATTTCCAACCCCCGCGGTAATTAGGTCCCCCTGTTAATTAAAATTTG AAGATTTTTCCAAACCTCCGTTTATTTCGACCACACCGTTTGTTAGGCAC CTGAGAGTACCACGACCTGTTTTGTAAATTATATGTTATATGCATACTAT AAGAGTTTGAAGACCCCGTTTTTACATTGCAGGTTTTTAATAAAAGGATA CTTCTTTTTCAGAAAATCCTAATCAAACTATTCAGCTTTTATTGACAACA TAGTTTGATTTCAAGTATATTTCTAAATGTTTTAACAGGTGGCTGGACGC AAATCGCAAACATTCGTCAAATCAATCAACAAAGCTTCTCTTTATCGTCA ATCCAAGTGGACACGCCAGGTGAACTTTCCGATCGCTTACTTTCGGGAGA AAACTATGCTCTCTCAGCTCAAGGTCTCCGAGATCTCGTCAACTCAACAG GAGCTAGACAACTGCGTGTTTATTGCTCCAAACCATCCGTTGGACGAACT TTCCACATCGAATCTCGAGATAATGCAATCGGAGACCAAATCCTTGAATA CTTTTCTGATGTTACGGCAACCGAGCTACCAGATGGTGCCGACTCTTTTG ATACCTTACCTGGTGACACTTCCTACCTAACTTCACATGTTCACGAGTGG CGATTTCAAAGCGGGAAATGGGGTCATGGCACCATTAAAACTCAGCCCAT GAAATTATACAAAAATCTAGTGTACATAAGTGACTCTAAAACACCACCCT CTTATGTTTATAAGGTGGGAATGAATTCAACTCCGAAGTTATATTGTGAC GATGATGGAACTTTGAATAGCGGAGAATGGAAATACTTCATTCGATGACG GATAGATTATTTGTGTAATATAGACCGCACAACATATAGCTTAGTGTAAA CATAATTTTTTATGACGCTGAGTCCAGTGAGTCTGAGTCACAGATATCTG TAAAGCCCGAAGGGCTAGATTTGCAGCTTTGTTCAAAAAGTGAAGCTCAT CTTTGGAAGGATTTCCTACCAGAGTCACGTGACTAAAATATGCAATTTCA CCGGTTTGAGAGATGTGAAATAGCG

Coding sequence (CDS) from alignment at scaffold_425:322652..335126-

>TCONS_00064886 ID=TCONS_00064886|Name=TCONS_00064886|organism=Clytia hemisphaerica|type=CDS|length=3105bp|location=Sequence derived from alignment at scaffold_425:322652..335126- (Clytia hemisphaerica)
GTGGCTGGACGCAAATCGCAAACATTCGTCAAATCAATCAACAAAGCTTC
TCTTTATCGTCAATCCAAGTGGACACGCCAGGTGAACTTTCCGATCGCTT
ACTTTCGGGAGAAAACTATGCTCTCTCAGCTCAAGGTCTCCGAGATCTCG
TCAACTCAACAGGAGCTAGACAACTGCGTGTTTATTGCTCCAAACCATCC
GTTGGACGAACTTTCCACATCGAATCTCGAGATAATGCAATCGGAGACCA
AATCCTTGAATACTTTTCTGATGTTACGGCAACCGAGCTACCAGATGGTG
CCGACTCTTTTGATACCTTACCTGGTGACACTTCCTACCTAACTTCACAT
GTTCACGAGTGGCGATTTCAAAGCGGGAAATGGGGTCATGGCACCATTAA
AACTCAGCCCATGAAATTATACAAAAATCTAGTGTACATAAGTGACTCTA
AAACACCACCCTCTTATGTTTATAAGGTGGGAATGAATTCAACTCCGAAG
TTATATTGTGACGATGATGGAACTTTGAATAGCGGAGAATGGAAATACTT
CATTCGATGAACCAGCCGAGCCCTGCAGAAGTGAAGCCCGTTACCTCACT
TCCAGAAGAAAGAAGTTGTTATGAACTGTTGCAAAAATATCCGAGCCTTC
CATCTCAAGAATATAACATCAATTTCAACGGAACCGAAGTTTTTGTTTAC
TGTGACATAACGCAAGGTCAAGATGTTAAATATAACCTTGACACTGCTCT
TTGTACTTCTTAGTTTCTCATCACTTGAACTAACCTGCTGCAGAGCAGAT
TTTTATCAGCTTGTGGATGGCAAAACATTACCTGAAAATGACCTTCTCCA
TAACGACACAGAAGTGATAACATCCATCAGTCGAATTCAATGTGCCTTGA
GATGCTCAAGACAAAAAACCATCTGTCAAACGGTTCTATATGATGAAGAG
AATCGAAAATGTATTTTACAGACTGTGAAGTCGACACAAAAATCACACGG
ATACAATACATGGAATACACTCCAAATACTAAAAGGTGGCTGGACGCAAA
TCGCAAACATTCGTCAAATCAATCAACAAAGCTTCTCTTTATCGTCAATC
CAAGTGGACACGCCAGGTGAACTTTCCGATCGCTTACTTTCGGGAGAAAA
CTATGCTCTCTCAGCTCAAGGTCTCCGAGATCTCGTCAACTCAACAGGAG
CTAGACAACTGCGTGTTTATTGCTCCAAACCATCCGTTGGACGAACTTTC
CACATCGAATCTCGAGATAATGCAATCGGAGACCAAATCCTTGAATACTT
TTCTGATGTTACGGCAACCGAGCTACCAGATGGTGCCGACTCTTTTGATA
CCTTACCTGGTGACACTTCCTACCTAACTTCACATGTTCACGAGTGGCGA
TTTCAAAGCGGGAAATGGGGTCATGGCACCATTAAAACTCAGCCCATGAA
ATTATACAAAAATCTAGTGTACATAAGTGACTCTAAAACACCACCCTCTT
ATGTTTATAAGGTGGGAATGAATTCAACTCCGAAGTTATATTGTGACGAT
GATGGAACTTTGAATAGCGGAGAATGGAAATACTTCATTCGATGAACCAG
CCGAGCCCTGCAGAAGTGAAGCCCGTTACCTCACTTCCAGAAGAAAGAAG
TTGTTATGAACTGTTGCAAAAATATCCGAGCCTTCCATCTCAAGAATATA
ACATCAATTTCAACGGAACCGAAGTTTTTGTTTACTGTGACATAACGCAA
GGTCAAGATGTTAAATATAACCTTGACACTGCTCTTTGTACTTCTTAGTT
TCTCATCACTTGAACTAACCTGCTGCAGAGCAGATTTTTATCAGCTTGTG
GATGGCAAAACATTACCTGAAAATGACCTTCTCCATAACGACACAGAAGT
GATAACATCCATCAGTCGAATTCAATGTGCCTTGAGATGCTCAAGACAAA
AAACCATCTGTCAAACGGTTCTATATGATGAAGAGAATCGAAAATGTATT
TTACAGACTGTGAAGTCGACACAAAAATCACACGGATACAATACATGGAA
TACACTCCAAATACTAAAAGGTGGCTGGACGCAAATCGCAAACATTCGTC
AAATCAATCAACAAAGCTTCTCTTTATCGTCAATCCAAGTGGACACGCCA
GGTGAACTTTCCGATCGCTTACTTTCGGGAGAAAACTATGCTCTCTCAGC
TCAAGGTCTCCGAGATCTCGTCAACTCAACAGGAGCTAGACAACTGCGTG
TTTATTGCTCCAAACCATCCGTTGGACGAACTTTCCACATCGAATCTCGA
GATAATGCAATCGGAGACCAAATCCTTGAATACTTTTCTGATGTTACGGC
AACCGAGCTACCAGATGGTGCCGACTCTTTTGATACCTTACCTGGTGACA
CTTCCTACCTAACTTCACATGTTCACGAGTGGCGATTTCAAAGCGGGAAA
TGGGGTCATGGCACCATTAAAACTCAGCCCATGAAATTATACAAAAATCT
AGTGTACATAAGTGACTCTAAAACACCACCCTCTTATGTTTATAAGGTGG
GAATGAATTCAACTCCGAAGTTATATTGTGACGATGATGGAACTTTGAAT
AGCGGAGAATGGAAATACTTCATTCGATGAACCAGCCGAGCCCTGCAGAA
GTGAAGCCCGTTACCTCACTTCCAGAAGAAAGAAGTTGTTATGAACTGTT
GCAAAAATATCCGAGCCTTCCATCTCAAGAATATAACATCAATTTCAACG
GAACCGAAGTTTTTGTTTACTGTGACATAACGCAAGGTCAAGATGTTAAA
TATAACCTTGACACTGCTCTTTGTACTTCTTAGTTTCTCATCACTTGAAC
TAACCTGCTGCAGAGCAGATTTTTATCAGCTTGTGGATGGCAAAACATTA
CCTGAAAATGACCTTCTCCATAACGACACAGAAGTGATAACATCCATCAG
TCGAATTCAATGTGCCTTGAGATGCTCAAGACAAAAAACCATCTGTCAAA
CGGTTCTATATGATGAAGAGAATCGAAAATGTATTTTACAGACTGTGAAG
TCGACACAAAAATCACACGGATACAATACATGGAATACACTCCAAATACT
AAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040691XLOC_040691Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064886-proteinTCONS_00064886-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064886-exon-scaffold_425-1575043694:334752..335126TCONS_00064886-exon-scaffold_425-1575043694:334752..335126Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1575043694:324199..324360TCONS_00064886-exon-scaffold_425-1575043694:324199..324360Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1575043694:322652..323438TCONS_00064886-exon-scaffold_425-1575043694:322652..323438Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1510915933:334752..335126TCONS_00064886-exon-scaffold_425-1510915933:334752..335126Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1510915933:324199..324360TCONS_00064886-exon-scaffold_425-1510915933:324199..324360Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1510915933:322652..323438TCONS_00064886-exon-scaffold_425-1510915933:322652..323438Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1491911889:334752..335126TCONS_00064886-exon-scaffold_425-1491911889:334752..335126Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1491911889:324199..324360TCONS_00064886-exon-scaffold_425-1491911889:324199..324360Clytia hemisphaericaexon
TCONS_00064886-exon-scaffold_425-1491911889:322652..323438TCONS_00064886-exon-scaffold_425-1491911889:322652..323438Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:322652..335126 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (9.25207 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0833397 0.0510533 0.0992608 0.209216 0.0946312 0 0 0 0 0 2.44763 1.27094 0 0.111164 0.165766 0.622983 8.84158 9.25207 1.35215 1.97859 0.675155 1.38108 1.58053 2.11588 2.9269 1.18484 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014716Fibrinogen_a/b/g_C_1
IPR003609Pan_app
IPR002181Fibrinogen_a/b/g_C_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064886 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
1002003004005006007008009001000110012001300Sequence
Match NameE-valueIdentityDescription
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