|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064854 ID=TCONS_00064854|Name=TCONS_00064854|organism=Clytia hemisphaerica|type=transcript|length=523bp
TTATGTTAGTACATAACCTATAGTACATAACCTTTAAATATAACGGTTTT
TTGTGTATATGGTTTTTCCAatgtaaaataaagtttggtttttaattcaa
atttctttatttaaattTCGATACTAGTAGATAAATATTAAGTGAGCTGA
ATATGAAGAGTAAGTTAAGTAAGTTGAGTCGCTTTCGTAAGCTGAGTAAT
CTGATAATGTCGCAAGTTTTGATTAGCCGAGTAATCTAGTAATTCCGAGT
AATCTAGTAATTCCATGCAATCTAGTAATTCCGAGTAATNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCAAGTTAGACCTA
TGCTTTCGATTCCCCCTCTATCTCAGTAAGTACCAACCTGAATAAATCAG
TCATAATGATGGGTAAGACAGAGATGACAACTGGTCCAGAGTTGTCCACG
CAGTTGGTTTTCAAGCTGAAAAGAAGAAATATCAATTTAAcatcaaagaa
tttgaaaatttaccaaTTTTATA Run BLAST on NCBI transcript from alignment at scaffold_425:330982..331989+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064854 ID=TCONS_00064854|Name=TCONS_00064854|organism=Clytia hemisphaerica|type=transcript|length=1008bp|location=Sequence derived from alignment at scaffold_425:330982..331989+ (Clytia hemisphaerica)
TTATGTTAGTACATAACCTATAGTACATAACCTTTAAATATAACGGTTTT
TTGTGTATATGGTTTTTCCAatgtaaaataaagtttggtttttccttAGC
CTGTACCTAACCCTACTTCTTTATGTAGCTGACGATAGTAGTGTTTGTTA
CGTTTAGAGAGATTTTGTGTGAAGTGTGTTTTCAAAAAGCTTCTAAGTGA
AGTGCAAAATTCTTATTGTCATCTGCAAAAGAAAGCCAATTATATTCTCT
TGGGACattaatttacaaaaaaattaactaTTTTAGCTTTTTATGACACA
TGCAATAAAAGGTCTAAAAGTTGATTCTCAagttaaaaattgttttcaac
agAAAATGCATGTAATTAAGAAATAACATTtcataaacaaagaaaaaatt
tcaaacactcCATTGTCTCTAATAACCCCTGATCAAATACAGTTTGTTTT
TCCTATGTAAAataaagtttagtttttcctatgcaaaataaagtttagtt
tttcctaTGCAAAATAGAGTTTGTTTTTCctattatatataaaataaagt
ttgtttttccaatgtaaaataggtttttaattcaaatttctttatttaaa
ttTCGATACTAGTAGATAAATATTAAGTGAGCTGAATATGAAGAGTAAGT
TAAGTAAGTTGAGTCGCTTTCGTAAGCTGAGTAATCTGATAATGTCGCAA
GTTTTGATTAGCCGAGTAATCTAGTAATTCCGAGTAATCTAGTAATTCCA
TGCAATCTAGTAATTCCGAGTAATNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATGTCAAGTTAGACCTATGCTTTCGATTCCCC
CTCTATCTCAGTAAGTACCAACCTGAATAAATCAGTCATAATGATGGGTA
AGACAGAGATGACAACTGGTCCAGAGTTGTCCACGCAGTTGGTTTTCAAG
CTGAAAAGAAGAAATATCAATTTAAcatcaaagaatttgaaaatttacca
aTTTTATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064854-exon-scaffold_425-1491911889:330982..331068 | TCONS_00064854-exon-scaffold_425-1491911889:330982..331068 | Clytia hemisphaerica | exon |
| TCONS_00064854-exon-scaffold_425-1510915933:330982..331068 | TCONS_00064854-exon-scaffold_425-1510915933:330982..331068 | Clytia hemisphaerica | exon |
| TCONS_00064854-exon-scaffold_425-1575043694:330982..331068 | TCONS_00064854-exon-scaffold_425-1575043694:330982..331068 | Clytia hemisphaerica | exon |
| TCONS_00064854-exon-scaffold_425-1491911889:331554..331989 | TCONS_00064854-exon-scaffold_425-1491911889:331554..331989 | Clytia hemisphaerica | exon |
| TCONS_00064854-exon-scaffold_425-1510915933:331554..331989 | TCONS_00064854-exon-scaffold_425-1510915933:331554..331989 | Clytia hemisphaerica | exon |
| TCONS_00064854-exon-scaffold_425-1575043694:331554..331989 | TCONS_00064854-exon-scaffold_425-1575043694:331554..331989 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_425 | supercontig | scaffold_425:330982..331989 + |
Blast
The following BLAST results are available for this feature:
|
