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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065029 ID=TCONS_00065029|Name=TCONS_00065029|organism=Clytia hemisphaerica|type=transcript|length=936bp
NTAAATAGTTGCGGCTAGATACAAAGAATAACCTTCAGCATAATGCCGAA
GGTGGGCCGTATTTCATATAGCTGCCTGACAACCCTTTCCTAAACGAAGC
GATTCTCCGTAatcgttgaaaaataaaaaaaatttctaataaaaataaaa
tgctacaatcttttgtttgttttttggtataaaaaaatcctaatcaaaat
aaaatactacaatcttttgtttgtttttttaagtatgaaaaattctaatt
aaaataaaaagctacaatcttttgtttgttttgtgtttattttttgaaaa
tcctacttcttgataaaataaaatactacttatgtatgaaaatgtaaaaa
gaaaagagatGAACGTGGGAGTCTGAGTTCATCATTGAAAGACATGTATA
CGATAGGTTAATTCGCCGTGTTGAAGACTGATGCCTTCATGTTGGTTTTG
GGAGAACTTGTTCACCAACCCAAACGAGTAAAACAATCAACACTACTGTT
TGTGTAATGCTTTGCTGTGGTTGATGATTGATTTCATTCCCAAAGTCTGT
TAAGACATTCGATGCATATCACCGAATTGCCGATTTCACTGAAGCGCGAT
TTCATCTAACGATTCGATGACGACATTTGATGGATGTTCTGGTACTGATG
TTTGGTTCTGAAGTCCAGGTAACTTTTAATACTTCACCAAAGTTGAAGTT
TTTCTGTAGTATATCCGGTATGTTGACTTCCATGATAGAAATTGCTTGAG
TGTTTGACGCAATTACTCTTCCGGATCTTGCTCCGATTGTGGTGATCCCC
GTTGAGTACTTGGTAGAATTCATATCGATGGTCTTCGAATTGCTGCATGC
CATAGCTGAGGTCTCCTTTGTGACTGTCGTAGTTGGAGTCTCGTTTGTGG
TCGTCATGGCTATTCGCATTGTCATGGCTGCTACAG Run BLAST on NCBI transcript from alignment at scaffold_428:12411..13459- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065029 ID=TCONS_00065029|Name=TCONS_00065029|organism=Clytia hemisphaerica|type=transcript|length=1049bp|location=Sequence derived from alignment at scaffold_428:12411..13459- (Clytia hemisphaerica)
NTAAATAGTTGCGGCTAGATACAAAGAATAACCTTCAGCATAATGCCGAA
GGTGGGCCGTATTTCATATAGCTGCCTGACAACCCTTTCCTAAACGAAGC
GATTCTCCGTAATCGTTGAAAAATAAAAAAAATTTCTAATAAAAATAAAA
TGCTACAATCTTTTGTTTGTTTTTTGGTATAAAAAAATCCTAATCAAAAT
AAAATACTACAATCTTTTGTTTGTTTTTTTAAGTATGAAAAATTCTAATT
AAAATAAAAAGCTACAATCTTTTGTTTGTTTTGTGTTTATTTTTTGAAAA
TCCTACTTCTTGATAAAATAAAATACTACTTATGTATGAAAATGTAAAAA
GAAAAGAGATGAACGTGGGAGTCTGAGTTCATCATTGAAAGACATGTATA
CGATAGGTTAATTCGCCGTGTTGAAGACTGATGCCTTCATGTTGGTTTTG
GGAGAACTTGTTCACCAACCCAAACGAGTAAAACAATCAACACTACTGTT
TGTGTAATGCTTTGCTGTGGTTGATGATTGATTTCATTCCCAAAGTCTGT
TAAGACATTCGATGCATATCACCGAATTGCCGATTTCACTGAAGCGCGAT
TTCATCTAACGGTAAGTGCAAATTTTGTTATGTTTCGGTATTTGTGAATC
TTTTTAAAATTTAGAGTTCTATTATGTTCGCTTTGCCACGTGGTGTCGTT
CTCTACGGATTCTCTTTTTTATAGATTCGATGACGACATTTGATGGATGT
TCTGGTACTGATGTTTGGTTCTGAAGTCCAGGTAACTTTTAATACTTCAC
CAAAGTTGAAGTTTTTCTGTAGTATATCCGGTATGTTGACTTCCATGATA
GAAATTGCTTGAGTGTTTGACGCAATTACTCTTCCGGATCTTGCTCCGAT
TGTGGTGATCCCCGTTGAGTACTTGGTAGAATTCATATCGATGGTCTTCG
AATTGCTGCATGCCATAGCTGAGGTCTCCTTTGTGACTGTCGTAGTTGGA
GTCTCGTTTGTGGTCGTCATGGCTATTCGCATTGTCATGGCTGCTACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065029-exon-scaffold_428-1575043694:12849..13459 | TCONS_00065029-exon-scaffold_428-1575043694:12849..13459 | Clytia hemisphaerica | exon |
| TCONS_00065029-exon-scaffold_428-1575043694:12411..12735 | TCONS_00065029-exon-scaffold_428-1575043694:12411..12735 | Clytia hemisphaerica | exon |
| TCONS_00065029-exon-scaffold_428-1510915933:12849..13459 | TCONS_00065029-exon-scaffold_428-1510915933:12849..13459 | Clytia hemisphaerica | exon |
| TCONS_00065029-exon-scaffold_428-1510915933:12411..12735 | TCONS_00065029-exon-scaffold_428-1510915933:12411..12735 | Clytia hemisphaerica | exon |
| TCONS_00065029-exon-scaffold_428-1491911889:12849..13459 | TCONS_00065029-exon-scaffold_428-1491911889:12849..13459 | Clytia hemisphaerica | exon |
| TCONS_00065029-exon-scaffold_428-1491911889:12411..12735 | TCONS_00065029-exon-scaffold_428-1491911889:12411..12735 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_428 | supercontig | scaffold_428:12411..13459 - |
Blast
The following BLAST results are available for this feature:
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