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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065070 ID=TCONS_00065070|Name=TCONS_00065070|organism=Clytia hemisphaerica|type=transcript|length=966bp gaaattttcacctgATATTTAAGTTACGTTTTTATATTACGCCTCTGGTC AAAACTTATCTAGGAGCGTTTAAGTTTACTCCACGTACACACTTTTGTAC CCTAAAAGAGGCTTAAAATTTTCTCagctatttttcaaatttaagggtaa gattgttcttatacttttgttcttaggtttttgcAGAAATATAACCTCAT ATTGTTCATGGTCTTCATAGAACTTTACAAGAAGGATTGGTCTGGAATGG AGAAAAGTCAAATTCTTCACATTCTTCATTGTTTAAAACTTGGAAGCAGC CCTGAAAACAACCCTGTATCAGTAGCAGTTGTAATTTTTCACCTTTAGAA AAGCGCAAACATCATCACCGCCTAATCGCCTGGTCGAGGTCAAGAACTAA GGATGATTAAATTCGATCAAAACAAGACAAATgctaaatggacctaccta acaATGAGAttcagataaaaatagaaaaattgccAAAGAGTAAGAAAATG CAATGAGGAGCTTGATAAGATAGATCAGAGATGAACATTATATATAAGTC ATATCCAATTTTTGTTGACTAAAGAATTCATGCCAGGCAAGGACTTGAAC AGCGATagtcggccggaaaaaaatttttctcaaaaaatcgaactcggtca ttGCGAaaacgcatctttctgcaaaaaatcagaaaaaactaaagatgaaT ATTTGAGAAAACGTCAAGAAACAGGTTTTTCCGGCTtacttccggcattt tcggccggaaaaaaatgttttttcaaaaatcgggctccatcacattttag gtattatcattttgcatcagtgtgcaaaatttcataaaataatataaagt acagctcgagaaattcaagaaatactgtctttgtgtggcgaaaataggtt gttccggcgatttttaaatagttccggcttcaaaaatcaattttattgaa aattgaaacatgcttg Run BLAST on NCBI transcript from alignment at scaffold_428:452159..453124 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065070 ID=TCONS_00065070|Name=TCONS_00065070|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at scaffold_428:452159..453124 (Clytia hemisphaerica) caagcatgtttcaattttcaataaaattgatttttgaagccggaactatt
taaaaatcgccggaacaacctattttcgccacacaaagacagtatttctt
gaatttctcgagctgtactttatattattttatgaaattttgcacactga
tgcaaaatgataatacctaaaatgtgatggagcccgatttttgaaaaaac
atttttttccggccgaaaatgccggaagtaAGCCGGAAAAACCTGTTTCT
TGACGTTTTCTCAAATAttcatctttagttttttctgattttttgcagaa
agatgcgtttTCGCaatgaccgagttcgattttttgagaaaaattttttt
ccggccgactATCGCTGTTCAAGTCCTTGCCTGGCATGAATTCTTTAGTC
AACAAAAATTGGATATGACTTATATATAATGTTCATCTCTGATCTATCTT
ATCAAGCTCCTCATTGCATTTTCTTACTCTTTggcaatttttctattttt
atctgaaTCTCATtgttaggtaggtccatttagcATTTGTCTTGTTTTGA
TCGAATTTAATCATCCTTAGTTCTTGACCTCGACCAGGCGATTAGGCGGT
GATGATGTTTGCGCTTTTCTAAAGGTGAAAAATTACAACTGCTACTGATA
CAGGGTTGTTTTCAGGGCTGCTTCCAAGTTTTAAACAATGAAGAATGTGA
AGAATTTGACTTTTCTCCATTCCAGACCAATCCTTCTTGTAAAGTTCTAT
GAAGACCATGAACAATATGAGGTTATATTTCTgcaaaaacctaagaacaa
aagtataagaacaatcttacccttaaatttgaaaaatagctGAGAAAATT
TTAAGCCTCTTTTAGGGTACAAAAGTGTGTACGTGGAGTAAACTTAAACG
CTCCTAGATAAGTTTTGACCAGAGGCGTAATATAAAAACGTAACTTAAAT
ATcaggtgaaaatttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00065070-exon-scaffold_428-1491911889:452159..453124 | TCONS_00065070-exon-scaffold_428-1491911889:452159..453124 | Clytia hemisphaerica | exon |
TCONS_00065070-exon-scaffold_428-1510915933:452159..453124 | TCONS_00065070-exon-scaffold_428-1510915933:452159..453124 | Clytia hemisphaerica | exon |
TCONS_00065070-exon-scaffold_428-1575043694:452159..453124 | TCONS_00065070-exon-scaffold_428-1575043694:452159..453124 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_428 | supercontig | scaffold_428:452159..453124 . |
Blast
The following BLAST results are available for this feature:
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