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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065153 ID=TCONS_00065153|Name=TCONS_00065153|organism=Clytia hemisphaerica|type=transcript|length=2095bp
TGGAGAGATATTTTCGAGGTGTGTgcgtgaaaaagaTGGCTACTAACAAT
GACAGAAAACTTTGGGAAGAACGtgcacaaaaactgaaaaggaAGAGAAT
GGGTCAGGACACAGTGAAGGGTGATAAAGCTGGTGCTGTTGGTTCTCATA
TTTTAGCCGAGAGAGAAATGACTGTTCAACGTCTTTCTAGTGTTGCTACT
GGGAAAGCAAtgaaattcaataaaatggggCCTCAGGAATTCGTGGCCTA
TCCATTTGATGAATTGACAATCGAAAATTTGATTCAAGCGTGCAGTGCAC
ATTTTCGAGATGAATTGCTTGACAATCAAAGGTGTGATATTTTGCAATCA
CAAGATGGTCCTTCTTGTTCTAAACTTTCACACATTAAAAGTTATAAGGT
GATTTATGTTCGTTTAATTACAAATGTGAATCAAGCATCCATTTCCATAA
GAAAGTATTTCGATAAGATGAAGATGCCACCTCGCAGCCCTTTATCCTCA
ATGAACGTTTTAAACTCTTCTGCAGTATCAACACCAAGCAAATCCATTAA
GCTTCAAATACCTCAAAAGCAAAAGCCTGTCCAAACTACTCAATATCCAA
AAAGCTTGTCCATCTCAAACATGCTTCAATTTGGAACAGCAATAACGAAA
ATGCAAAATCCACCCGTGGAAATTGAGCTCCAAGAAATTGACGTTTCAGC
TATGAAATGGAGCTATCCaacatcaaaaagattttctatcTCGGAGACTC
CTCTTACCAAAGGTGGATTTAGGGAAGTGTCTGAAGCCATCGATGTGGac
acaaaaaagaaatttgttgtGAAAACCTTCCTTCCAGAAGTTTTCAAAGT
AATGGAAGAAGTGAATACTGTTATTCCACTTAATAAAGAAAGTGAGGAGT
CTCTATCAAAAAAGGCCATACAAGCCCATGCCCTAGCTAAAAATGTCACC
gattcattgaaaaaattatgCTTCAATAATAACTTAATGGACGATTTTGG
GGAGTTTTTTACATATAATAAAGCGTACTTAGGATCAAAGGTGATGCACG
gtggagagaaaaaaattgtcatgGTGGAAGAGTACGTTGATGGAGAATTT
ATTAAATTTATCAACAATGATGGCAAAATCATTCATGGTCAGCCAAAAGA
TCTGGACCGTTTACTGAAAGCCCAATGTCTTGCCCACTACTCACTCGTGA
AATCTGGGCAAAGGTTTATGATTGTTGACATCCAAGGTTCAGGTTATACA
CTTTACGATCCTGAAATTGCTACGACTGGTGATGCTATAGAAAATGAGCG
TTTAAACTTTAATCTTGGCAATTTGTCCAAAGCTGCAATTGATTTGTTTA
TCATTGCTCATGTTTGCAATAGATTCTGTAAACTTGTTGGGCTGGAGCAA
CCTCCTTCCTCAAAGATCGACTTGTCAAAATAAACTACACAACTGTTTGA
AGCAATTTCTTACGTTTATATTTTACtcgattttatttttgttctagGTT
ATATATTAAAACTTATTGTTTCactatgaaaataatatattaaaataata
attcCTATTTACaaatatataaacaaacaaTTCATGCGTAAATCACAAAT
AATAGTTAAACCCGAGAAAGATAGTAGGGGAGTACAAAGATGAAagacaa
aaatgggtgctgggtatgtacgggtcattttttaaactttaaggATTACA
GAAATCAGAACAATTTAAAGTTGTCCCTTCAAGGATTGGAAAATTCATGC
TCTTTGAGTTTCTAGAGAAAGATTGGTAGATAGTCTTTCTTAGGAGGAAA
ATTATCGAAAAtcgaagaacatttttaaaaatgtctctccaagggtcact
ttttcactgaAATTAGGTCTTTCTAAGAGTTGTCCCTCCCGCACATACCC
GTTATCtccaaacctagtacccccgaGGCCAGCACTCCAAAACGACCTAG
ACATTTTCTTGGTTTTCTGTGTCGGCGAGAACCAAAAGCTTTTTTGGGGC
CCTAGTTaatattttaaaaagctttGTGTATAAATACTAAAGAATAtaga
taattttttataatattgTCGAATGAAGTTAATGTGTTTTATTTC Run BLAST on NCBI protein sequence of TCONS_00065153-protein >TCONS_00065153-protein ID=TCONS_00065153-protein|Name=TCONS_00065153-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
ERYFRGVCVKKMATNNDRKLWEERAQKLKRKRMGQDTVKGDKAGAVGSHI
LAEREMTVQRLSSVATGKAMKFNKMGPQEFVAYPFDELTIENLIQACSAH
FRDELLDNQRCDILQSQDGPSCSKLSHIKSYKVIYVRLITNVNQASISIR
KYFDKMKMPPRSPLSSMNVLNSSAVSTPSKSIKLQIPQKQKPVQTTQYPK
SLSISNMLQFGTAITKMQNPPVEIELQEIDVSAMKWSYPTSKRFSISETP
LTKGGFREVSEAIDVDTKKKFVVKTFLPEVFKVMEEVNTVIPLNKESEES
LSKKAIQAHALAKNVTDSLKKLCFNNNLMDDFGEFFTYNKAYLGSKVMHG
GEKKIVMVEEYVDGEFIKFINNDGKIIHGQPKDLDRLLKAQCLAHYSLVK
SGQRFMIVDIQGSGYTLYDPEIATTGDAIENERLNFNLGNLSKAAIDLFI
IAHVCNRFCKLVGLEQPPSSKIDLSK Run BLAST on NCBI transcript from alignment at scaffold_433:63496..68136+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065153 ID=TCONS_00065153|Name=TCONS_00065153|organism=Clytia hemisphaerica|type=transcript|length=4641bp|location=Sequence derived from alignment at scaffold_433:63496..68136+ (Clytia hemisphaerica)
TGGAGAGATATTTTCGAGGTGTGTgcgtgaaaaaggtacccttaactTGG
CCATCAGTCAGCATCACTTGACTTGCACATACCAACATACATACTACCCA
TACACACCCCCAGATTATTTTAGGCTATTAAAAAGGAAGGGATCTGCAAC
ACAATCCATCAGTCCCATCAAGATGATATAATTTTTTCTCAAGGCATCCT
CACTCCATGACAGACCACCATAGAATGAATGTTCAATTCACACAGCTTCC
CTTTATAAACTTTCACCTGGACTCTCCTCCACAGAGTCTAACTacacttt
ttcaaaaactaacCATAGATTTGAAATCAAACCTTCTTTGTATGAAAGCA
TACCTAATAAATTCTCAATagtataaaaatttaaaaaattgaaccTGAGA
ATTAATCAAATTATTAATTAAAATTGATCACCCTCAGGGATGGAGCGCAC
TTTGAAATAAAAGagagttcattctatggtggtcTATCATGGAGTGAGGA
tgtctaaaattatttttggtacATTTCCTCCTCAAACCTTCCCCTTTCAA
AATACCAAAAGGATTTGTCAACATGCAAGCTTTAAATGATCCAACTAGAC
TATAAATTTTGAACTTTAGAGGCCTGCCGCACCGCACCTTCCATGACGGA
CGCGTGGCGTCGACCGTTCCGGCATATAAATATGAAAGGCAAAATATGGT
TTGAAACTGATAATGCCTGAAATAGTAAAAtgctcaggtaagttatggca
tgtccaaaaaactgaaaaattaccataatttttggagggcattagccggc
agaatctgaccaaacaaatgactcattatgaagggtactatgataaAGTT
TCTCAGacgatgtgtaacctaattgtttggcgctcattttcgcgaaaaac
gcAAATATTCCATTATTACATACgtcataattgatgacgtcataaaaatt
gaaaattgaatttctcgagaATGGTTTATCCATAATTCACTccaaatttt
aaacaaagataGGTCTTGGTAAACTCCatcttttaacgaaaaaatttttt
aaaaattttgatgactttgatgacgtcagcaaaaataagcagaattcgaa
aattgcaaatttttgatgaggtcatcaaaattttgaaaaatttttaacgt
TAAAAGATGGAGTTTACCAAGACCTATCTTTGTTTAAATTTTGGAGtgaa
ttggataaaccattctcgagaaattcaatttttatgacgtcatcaattat
gacGTAATAATGGAAAATTTgcgtttttcgcgaaaataagcgccaaaaca
attaggtaacacatCCTCTGAGAAACTttatcatagtacccttcataaTC
AGTCATTTAAGTTTGGTCAGATTATGCCGGCTAATGCCCTCCAAAAATTA
TGGCAATTTttggacatgccataacttacccgagtgtTATGTTACAATCA
ATGAATAAGAGTAATAAATGTACAACTATCACTCAAAACTGGTGCTAAGA
ACCCCACATAACCCAAGATAAAAAACACGGTTCAGCACGGTTCTGCGAAA
AGCAgcaaaaaatacctcaaaaaCCCTTCAAAAAGCCCCTTAAAAAGACC
TGTTTCTCACTTCCCataacaaaaatcttttaaaaatacaTCATAAAGAT
GTTCAAATACACTCTAGGtttgaaaaatataacattATAGCACTCGAAAT
TCATATTTTAGGTAATATCCATTAGAGGTCCTCCAGAACAGCTTTTCCAA
ACTTTTTAACTACTAAAACTCTTTTATGCAGCTTAGCTACCATCTTTAGG
GGATTGTTTACAAAGTGGGGCCCAATATTTGGCTCCAATAAGCCGATTCT
GGCGCTAATTGGCCGTtgtaaccattgagtttcaagcccgaagggctaga
ggtcaatctctaacctttctcaggcaagaaaaattgaagccttaaaatat
gcgccgtatttttgatgacggattgaatctagcaattcctttgttttcga
gtgatatatttttcgaaattaagcggtaaattttagtctcaatctgtcat
ttgtgtaaaaaccaggcgggtcgctcaaggccgcgcaactttggtaggat
ttgttggcttcaaatcctaccaaagagattgatttctagcccttcgggct
tataattCATTGGTTGTAACTACCGAAATCTATTTTCGACATCGAAAATT
CAATTGCAAAAACATTATGTTTTGGCAATCCGAAATCGAATCCGATTacc
ccgattttcggaaaaagtaACCCGATTCggaaaattcaacctttccttCA
ACCTTTGCcacaaaaatgaagtttatatctGCAACATACCCAAAGATATA
GCCAATTTAATATGGTAACCAGTTTTGCGTAGATCTATGGCATCCGCCAG
GTAGACTTGCGTAGATCTACGGCATCCGCCAGGTAGACTTGCATAGATCT
ACGGCATCCGCCGCCTAAAGTTAAAGTTAAATCGGAATTCATAAacatta
aaaatggtagactttgTATGGTGTCGCNGTAATTGTCGACTTATATATCT
AAAAATTTCCcccttgttttttcttttgcagaTGGCTACTAACAATGACA
GAAAACTTTGGGAAGAACGtgcacaaaaactgaaaaggaAGAGAATGGGT
CAGGACACAGTGAAGGGTGATAAAGCTGGTGCTGTTGGTTCTCATATTTT
AGCCGAGAGAGAAATGACTGTTCAACGTCTTTCTAGTGTTGCTACTGGGA
AAGCAAtgaaattcaataaaatggggCCTCAGGAATTCGTGGCCTATCCA
TTTGATGAATTGACAATCGAAAATTTGATTCAAGCGTGCAGTGCACATTT
TCGAGATGAATTGCTTGACAATCAAAGGTGTGATATTTTGCAATCACAAG
ATGGTCCTTCTTGTTCTAAACTTTCACACATTAAAAGTTATAAGGTGATT
TATGTTCGTTTAATTACAAATGTGAATCAAGCATCCATTTCCATAAGAAA
GTATTTCGATAAGATGAAGATGCCACCTCGCAGCCCTTTATCCTCAATGA
ACGTTTTAAACTCTTCTGCAGTATCAACACCAAGCAAATCCATTAAGCTT
CAAATACCTCAAAAGCAAAAGCCTGTCCAAACTACTCAATATCCAAAAAG
CTTGTCCATCTCAAACATGCTTCAATTTGGAACAGCAATAACGAAAATGC
AAAATCCACCCGTGGAAATTGAGCTCCAAGAAATTGACGTTTCAGCTATG
AAATGGAGCTATCCaacatcaaaaagattttctatcTCGGAGACTCCTCT
TACCAAAGGTGGATTTAGGGAAGTGTCTGAAGCCATCGATGTGGacacaa
aaaagaaatttgttgtGAAAACCTTCCTTCCAGAAGTTTTCAAAGTAATG
GAAGAAGTGAATACTGTTATTCCACTTAATAAAGAAAGTGAGGAGTCTCT
ATCAAAAAAGGCCATACAAGCCCATGCCCTAGCTAAAAATGTCACCgatt
cattgaaaaaattatgCTTCAATAATAACTTAATGGACGATTTTGGGGAG
TTTTTTACATATAATAAAGCGTACTTAGGATCAAAGGTGATGCACGgtgg
agagaaaaaaattgtcatgGTGGAAGAGTACGTTGATGGAGAATTTATTA
AATTTATCAACAATGATGGCAAAATCATTCATGGTCAGCCAAAAGATCTG
GACCGTTTACTGAAAGCCCAATGTCTTGCCCACTACTCACTCGTGAAATC
TGGGCAAAGGTTTATGATTGTTGACATCCAAGGTTCAGGTTATACACTTT
ACGATCCTGAAATTGCTACGACTGGTGATGCTATAGAAAATGAGCGTTTA
AACTTTAATCTTGGCAATTTGTCCAAAGCTGCAATTGATTTGTTTATCAT
TGCTCATGTTTGCAATAGATTCTGTAAACTTGTTGGGCTGGAGCAACCTC
CTTCCTCAAAGATCGACTTGTCAAAATAAACTACACAACTGTTTGAAGCA
ATTTCTTACGTTTATATTTTACtcgattttatttttgttctagGTTATAT
ATTAAAACTTATTGTTTCactatgaaaataatatattaaaataataattc
CTATTTACaaatatataaacaaacaaTTCATGCGTAAATCACAAATAATA
GTTAAACCCGAGAAAGATAGTAGGGGAGTACAAAGATGAAagacaaaaat
gggtgctgggtatgtacgggtcattttttaaactttaaggATTACAGAAA
TCAGAACAATTTAAAGTTGTCCCTTCAAGGATTGGAAAATTCATGCTCTT
TGAGTTTCTAGAGAAAGATTGGTAGATAGTCTTTCTTAGGAGGAAAATTA
TCGAAAAtcgaagaacatttttaaaaatgtctctccaagggtcacttttt
cactgaAATTAGGTCTTTCTAAGAGTTGTCCCTCCCGCACATACCCGTTA
TCtccaaacctagtacccccgaGGCCAGCACTCCAAAACGACCTAGACAT
TTTCTTGGTTTTCTGTGTCGGCGAGAACCAAAAGCTTTTTTGGGGCCCTA
GTTaatattttaaaaagctttGTGTATAAATACTAAAGAATAtagataat
tttttataatattgTCGAATGAAGTTAATGTGTTTTATTTC Coding sequence (CDS) from alignment at scaffold_433:63496..68136+ >TCONS_00065153 ID=TCONS_00065153|Name=TCONS_00065153|organism=Clytia hemisphaerica|type=CDS|length=2862bp|location=Sequence derived from alignment at scaffold_433:63496..68136+ (Clytia hemisphaerica)
GAGAGATATTTTCGAGGTGTGTgcgtgaaaaagaTGGCTACTAACAATGA
CAGAAAACTTTGGGAAGAACGtgcacaaaaactgaaaaggaAGAGAATGG
GTCAGGACACAGTGAAGGGTGATAAAGCTGGTGCTGTTGGTTCTCATATT
TTAGCCGAGAGAGAAATGACTGTTCAACGTCTTTCTAGTGTTGCTACTGG
GAAAGCAAtgaaattcaataaaatggggCCTCAGGAATTCGTGGCCTATC
CATTTGATGAATTGACAATCGAAAATTTGATTCAAGCGTGCAGTGCACAT
TTTCGAGATGAATTGCTTGACAATCAAAGGTGTGATATTTTGCAATCACA
AGATGGTCCTTCTTGTTCTAAACTTTCACACATTAAAAGTTATAAGGTGA
TTTATGTTCGTTTAATTACAAATGTGAATCAAGCATCCATTTCCATAAGA
AAGTATTTCGATAAGATGAAGATGCCACCTCGCAGCCCTTTATCCTCAAT
GAACGTTTTAAACTCTTCTGCAGTATCAACACCAAGCAAATCCATTAAGC
TTCAAATACCTCAAAAGCAAAAGCCTGTCCAAACTACTCAATATCCAAAA
AGCTTGTCCATCTCAAACATGCTTCAATTTGGAACAGCAATAACGAAAAT
GCAAAATCCACCCGTGGAAATTGAGCTCCAAGAAATTGACGTTTCAGCTA
TGAAATGGAGCTATCCaacatcaaaaagattttctatcTCGGAGACTCCT
CTTACCAAAGGTGGATTTAGGGAAGTGTCTGAAGCCATCGATGTGGacac
aaaaaagaaatttgttgtGAAAACCTTCCTTCCAGAAGTTTTCAAAGTAA
TGGAAGAAGTGAATACTGTTATTCCACTTAATAAAGAAAGTGAGGAGTCT
CTATCAAAAAAGGCCATACAAGCCCATGCCCTAGCTAAAAATGTCACCga
ttcattgaaaaaattatgCTTCAATAATAACTTAATGGACGATTTTGGGG
AGTTTTTTACATATAATAAAGCGTACTTAGGATCAAAGGTGATGCACGgt
ggagagaaaaaaattgtcatgGTGGAAGAGTACGTTGATGGAGAATTTAT
TAAATTTATCAACAATGATGGCAAAATCATTCATGGTCAGCCAAAAGATC
TGGACCGTTTACTGAAAGCCCAATGTCTTGCCCACTACTCACTCGTGAAA
TCTGGGCAAAGGTTTATGATTGTTGACATCCAAGGTTCAGGTTATACACT
TTACGATCCTGAAATTGCTACGACTGGTGATGCTATAGAAAATGAGCGTT
TAAACTTTAATCTTGGCAATTTGTCCAAAGCTGCAATTGATTTGTTTATC
ATTGCTCATGTTTGCAATAGATTCTGTAAACTTGTTGGGCTGGAGCAACC
TCCTTCCTCAAAGATCGACTTGTCAAAATAAGAGAGATATTTTCGAGGTG
TGTgcgtgaaaaagaTGGCTACTAACAATGACAGAAAACTTTGGGAAGAA
CGtgcacaaaaactgaaaaggaAGAGAATGGGTCAGGACACAGTGAAGGG
TGATAAAGCTGGTGCTGTTGGTTCTCATATTTTAGCCGAGAGAGAAATGA
CTGTTCAACGTCTTTCTAGTGTTGCTACTGGGAAAGCAAtgaaattcaat
aaaatggggCCTCAGGAATTCGTGGCCTATCCATTTGATGAATTGACAAT
CGAAAATTTGATTCAAGCGTGCAGTGCACATTTTCGAGATGAATTGCTTG
ACAATCAAAGGTGTGATATTTTGCAATCACAAGATGGTCCTTCTTGTTCT
AAACTTTCACACATTAAAAGTTATAAGGTGATTTATGTTCGTTTAATTAC
AAATGTGAATCAAGCATCCATTTCCATAAGAAAGTATTTCGATAAGATGA
AGATGCCACCTCGCAGCCCTTTATCCTCAATGAACGTTTTAAACTCTTCT
GCAGTATCAACACCAAGCAAATCCATTAAGCTTCAAATACCTCAAAAGCA
AAAGCCTGTCCAAACTACTCAATATCCAAAAAGCTTGTCCATCTCAAACA
TGCTTCAATTTGGAACAGCAATAACGAAAATGCAAAATCCACCCGTGGAA
ATTGAGCTCCAAGAAATTGACGTTTCAGCTATGAAATGGAGCTATCCaac
atcaaaaagattttctatcTCGGAGACTCCTCTTACCAAAGGTGGATTTA
GGGAAGTGTCTGAAGCCATCGATGTGGacacaaaaaagaaatttgttgtG
AAAACCTTCCTTCCAGAAGTTTTCAAAGTAATGGAAGAAGTGAATACTGT
TATTCCACTTAATAAAGAAAGTGAGGAGTCTCTATCAAAAAAGGCCATAC
AAGCCCATGCCCTAGCTAAAAATGTCACCgattcattgaaaaaattatgC
TTCAATAATAACTTAATGGACGATTTTGGGGAGTTTTTTACATATAATAA
AGCGTACTTAGGATCAAAGGTGATGCACGgtggagagaaaaaaattgtca
tgGTGGAAGAGTACGTTGATGGAGAATTTATTAAATTTATCAACAATGAT
GGCAAAATCATTCATGGTCAGCCAAAAGATCTGGACCGTTTACTGAAAGC
CCAATGTCTTGCCCACTACTCACTCGTGAAATCTGGGCAAAGGTTTATGA
TTGTTGACATCCAAGGTTCAGGTTATACACTTTACGATCCTGAAATTGCT
ACGACTGGTGATGCTATAGAAAATGAGCGTTTAAACTTTAATCTTGGCAA
TTTGTCCAAAGCTGCAATTGATTTGTTTATCATTGCTCATGTTTGCAATA
GATTCTGTAAACTTGTTGGGCTGGAGCAACCTCCTTCCTCAAAGATCGAC
TTGTCAAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065153-exon-scaffold_433-1491911889:63496..63530 | TCONS_00065153-exon-scaffold_433-1491911889:63496..63530 | Clytia hemisphaerica | exon |
| TCONS_00065153-exon-scaffold_433-1510915933:63496..63530 | TCONS_00065153-exon-scaffold_433-1510915933:63496..63530 | Clytia hemisphaerica | exon |
| TCONS_00065153-exon-scaffold_433-1575043694:63496..63530 | TCONS_00065153-exon-scaffold_433-1575043694:63496..63530 | Clytia hemisphaerica | exon |
| TCONS_00065153-exon-scaffold_433-1491911889:66077..68136 | TCONS_00065153-exon-scaffold_433-1491911889:66077..68136 | Clytia hemisphaerica | exon |
| TCONS_00065153-exon-scaffold_433-1510915933:66077..68136 | TCONS_00065153-exon-scaffold_433-1510915933:66077..68136 | Clytia hemisphaerica | exon |
| TCONS_00065153-exon-scaffold_433-1575043694:66077..68136 | TCONS_00065153-exon-scaffold_433-1575043694:66077..68136 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_433 | supercontig | scaffold_433:63496..68136 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004674 |
protein serine/threonine kinase activity |
Blast
The following BLAST results are available for this feature:
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