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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065278 ID=TCONS_00065278|Name=TCONS_00065278|organism=Clytia hemisphaerica|type=transcript|length=643bp
NCCACCTGTGAAGAAGATGACGAAGAAACGGATGAAGAAGAACATGAAGT
GCAATCAGCTGTTAAGCGGCACAAGTTCAAGTCACCAAAAGTTGGAttat
ccataatggcagacaaGCTTCACTTGGAGAAAGGTGGTGACGtcaaaatt
ttcacaatttCTTCATCAAGGAAAAAGAACGATGATTGTGACAAAGACGA
TGAACGACTTTTACAAATTTAAATCCGACtctcaattttttcactttcac
ttttaacatttaattttcatttgatttggtGCAAATTTAGGGACAATTAT
TGATTGAAGAAGGGCCAGTTTTCAGTAAAAATATCCTTGGTATCCTTTCT
TAATTCATCTGTATATAATTTATTATTATCGTAACTTCACTGTTTCgaat
ttctttgtgttttctgACGCTCTATCGAGGGATTTCAATTTTACTTAgca
gtaaaattatttttaatttaatcttttttaaatcgcagCTATTATAAGCT
CTGTATGTAATagattttgtttaaattttcgAGAAGTCATTTTTTTGGTT
GTATATAGCAAATATACTCTCTCATTATTATTGttgtataattgtttttt
tgtaaaaacttagaaaatatatccaaaaaaaattaaaactgcA Run BLAST on NCBI transcript from alignment at scaffold_435:200233..201349- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065278 ID=TCONS_00065278|Name=TCONS_00065278|organism=Clytia hemisphaerica|type=transcript|length=1117bp|location=Sequence derived from alignment at scaffold_435:200233..201349- (Clytia hemisphaerica)
NCCACCTGTGAAGAAGATGACGAAGAAACGGATGAAGAAGAACATGAAGT
GCAATCAGCTGTTAAGGTGACCCTCATTGCTTCATTTTCTGCCTTTGGGA
GTAATAATAGCGAGTGCAACAATCAAATAAAAAATAAATAAAAAAATGAA
TCATTTTGAGAAACGTCACTTGCTCTTATAAAAACCGTAACCTGCCCTGC
GTGGCTTGCTTTGTAACGTGGCAATGGTGTTGACATATCATAATTTTGAT
TGTCAAAGTAGTTTTGTTGTTAGGAAAAAAAAGATTGTAAAGAATGATCT
TGTCTCTTTGCACATTATGAATAGAAGTTTGATGCAGCACTTTTTCTAAT
GTCTAAACTTGAATACTCCACTGTCAGCAAATTCACTATATTTTGCCCAC
TGGTTTATATTTATTAACGCATACAGTATGCTGTCTATGTTCTTTCCGAA
TATACAGTAGTAGTTACGCGAAAACATTACCGTTTATTAAATGTTTCTGC
TCAACAAGATTGAAGAAAGTGCCTTCTTATTTCTTTTTAGCGGCACAAGT
TCAAGTCACCAAAAGTTGGATTATCCATAATGGCAGACAAGCTTCACTTG
GAGAAAGGTGGTGACGTCAAAATTTTCACAATTTCTTCATCAAGGAAAAA
GAACGATGATTGTGACAAAGACGATGAACGACTTTTACAAATTTAAATCC
GACTCTCAATTTTTTCACTTTCACTTTTAACATTTAATTTTCATTTGATT
TGGTGCAAATTTAGGGACAATTATTGATTGAAGAAGGGCCAGTTTTCAGT
AAAAATATCCTTGGTATCCTTTCTTAATTCATCTGTATATAATTTATTAT
TATCGTAACTTCACTGTTTCGAATTTCTTTGTGTTTTCTGACGCTCTATC
GAGGGATTTCAATTTTACTTAGCAGTAAAATTATTTTTAATTTAATCTTT
TTTAAATCGCAGCTATTATAAGCTCTGTATGTAATAGATTTTGTTTAAAT
TTTCGAGAAGTCATTTTTTTGGTTGTATATAGCAAATATACTCTCTCATT
ATTATTGTTGTATAATTGTTTTTTTGTAAAAACTTAGAAAATATATCCAA
AAAAAATTAAAACTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065278-exon-scaffold_435-1575043694:201284..201349 | TCONS_00065278-exon-scaffold_435-1575043694:201284..201349 | Clytia hemisphaerica | exon |
| TCONS_00065278-exon-scaffold_435-1575043694:200233..200809 | TCONS_00065278-exon-scaffold_435-1575043694:200233..200809 | Clytia hemisphaerica | exon |
| TCONS_00065278-exon-scaffold_435-1510915933:201284..201349 | TCONS_00065278-exon-scaffold_435-1510915933:201284..201349 | Clytia hemisphaerica | exon |
| TCONS_00065278-exon-scaffold_435-1510915933:200233..200809 | TCONS_00065278-exon-scaffold_435-1510915933:200233..200809 | Clytia hemisphaerica | exon |
| TCONS_00065278-exon-scaffold_435-1491911889:201284..201349 | TCONS_00065278-exon-scaffold_435-1491911889:201284..201349 | Clytia hemisphaerica | exon |
| TCONS_00065278-exon-scaffold_435-1491911889:200233..200809 | TCONS_00065278-exon-scaffold_435-1491911889:200233..200809 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_435 | supercontig | scaffold_435:200233..201349 - |
Blast
The following BLAST results are available for this feature:
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