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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065390 ID=TCONS_00065390|Name=TCONS_00065390|organism=Clytia hemisphaerica|type=transcript|length=548bp
aaaatatttattcacgATTGCATTTTCACACTTTTATTTACATTCACTCT
AAccacaggggggggggttcatttcaaaattttcgtcgtACGCTTAGTAT
TTCCTTTCCAACGAGCTATCACTTACTTGTAGTTACATATTTCTCCTTCA
AGAGCAATGTATTTAAATATGCggaattcaaatttatttggAATAGACTA
GATATATTAGAAAGATGATATTCTATTTTAGTTTCAATGTGCTCCTGTCT
GCCCACATTGTGGCAGAAGGCGGAATTATTATATAAACGTGAACCAGCAA
GCCATGATCGATACGGACCGAATGAGTGGTGTAAATAGGGGTTCTTTAAT
GtaatatatttatttattttcattaatttataTCACGGCGATCTTTAAAT
TAAtgttcgaaaatcgaaaatcggggaaatttttgCCGTTTCTTATAAGG
ACCTGGGGCGCAGAGGGGAACTGGATTAAAAACGACCTTACGTcttttca
ttggattttctttttattgttcATTAACAGATAAAGGAAAAGTCCTGC Run BLAST on NCBI transcript from alignment at scaffold_439:80984..82081- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065390 ID=TCONS_00065390|Name=TCONS_00065390|organism=Clytia hemisphaerica|type=transcript|length=1098bp|location=Sequence derived from alignment at scaffold_439:80984..82081- (Clytia hemisphaerica)
AAAATATTTATTCACGATTGCATTTTCACACTTTTATTTACATTCACTCT
AACCACAGGGGGGGGGGTTCATTTCAAAATTTTCGTCGTACGCTTAGTAT
TTCCTTTCCAACGAGCTATCACTTACTTGTAGTTACATATTTCTCCTTCA
AGAGCAATGTATTTAAATATGCGGAATTCAAATTTATTTGGAATAGACTA
GATATATTAGAAAGATGATATTCTATTTTAGTTTCAATGTGCTCCTGTCT
GCCCACATTGTGGCAGAAGGCGGAATTATTATATAAACGGTAAGTCTGAG
ATTATTAAAGTTCTTTCTTTGCGGGTACTGTATACTAATTTTAGAAAGTG
TTGAAAACAGATCTGCTTTTTTATAAGCACAATTTTATGAATGCTTAATT
TTGCCTGGAACCTATTAAAGTCCATTCACTTTAAGTGTTCACTTTACGTT
TTTATAAGAATTATATTTTTCATTTCGTCAGATATTTTTCACTTTTTGGG
GAAATCAACCTAAAATATTCTCATGCTTCAAAATTTAAAAGTTACATTTA
AAAGTTTTAAAATTTAAACAAAAATGAAGTTTTGTAGGATGTAGGATAAA
GCTCATTTTCTTCTTCTTCATTTTTCATGTTGATTTCTAAAAATTGTTTA
CTTATATTTCTCATTATAAAGTGCTCTAAATCATTATTCCAACGGTATAT
AATATGCTAATATTGAATCATTCGTTGAGAAATAGCAAGCTAAACAAAGA
TTAGTGCACAATTAATGAATTTGCTTATTTGAAGCCATACATACATGGTA
AAATTGCGACCCTGCAATTCTATTTTTCTTACCTTATAGTGAACCAGCAA
GCCATGATCGATACGGACCGAATGAGTGGTGTAAATAGGGGTTCTTTAAT
GTAATATATTTATTTATTTTCATTAATTTATATCACGGCGATCTTTAAAT
TAATGTTCGAAAATCGAAAATCGGGGAAATTTTTGCCGTTTCTTATAAGG
ACCTGGGGCGCAGAGGGGAACTGGATTAAAAACGACCTTACGTCTTTTCA
TTGGATTTTCTTTTTATTGTTCATTAACAGATAAAGGAAAAGTCCTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065390-exon-scaffold_439-1575043694:81793..82081 | TCONS_00065390-exon-scaffold_439-1575043694:81793..82081 | Clytia hemisphaerica | exon |
| TCONS_00065390-exon-scaffold_439-1575043694:80984..81242 | TCONS_00065390-exon-scaffold_439-1575043694:80984..81242 | Clytia hemisphaerica | exon |
| TCONS_00065390-exon-scaffold_439-1510915933:81793..82081 | TCONS_00065390-exon-scaffold_439-1510915933:81793..82081 | Clytia hemisphaerica | exon |
| TCONS_00065390-exon-scaffold_439-1510915933:80984..81242 | TCONS_00065390-exon-scaffold_439-1510915933:80984..81242 | Clytia hemisphaerica | exon |
| TCONS_00065390-exon-scaffold_439-1491911889:81793..82081 | TCONS_00065390-exon-scaffold_439-1491911889:81793..82081 | Clytia hemisphaerica | exon |
| TCONS_00065390-exon-scaffold_439-1491911889:80984..81242 | TCONS_00065390-exon-scaffold_439-1491911889:80984..81242 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:80984..82081 - |
Blast
The following BLAST results are available for this feature:
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