TCONS_00066197 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066197
Unique NameTCONS_00066197
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length830

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066197 ID=TCONS_00066197|Name=TCONS_00066197|organism=Clytia hemisphaerica|type=transcript|length=830bp
CCTCACTGTAAACCTCATTGATTGAGCAAGAtcagaaattaatttttcag
ctgttttgaaatttaaagtaTTTGAGAATGCCAAGTTTAATTTAAGtgat
ttttcttaaatatttttgtttgatatTCTTGGAAAATAAGTTTtgatgta
aaaaataatttagagCAATTTGATGAAATGGAGGTCCCAAAGATCATGAT
CAACGGTTCTGAATTACCATCAACACCAGTAGATACAACCAAAACTAAAC
CAGATTCAAAAACACCAGAAATGTCTTCAACCATTGAACCTCGATCACAA
TCTGACGTCAAACCTGCCAACAAACCAAGAGGTTTTGGAAGCATCTTGAG
TTTCAGAAAGAAGAAAACTTACACGTTGAATGACAGAGAAGCGGATGATT
TGAAAATCGTTTCACACCCTGATAACGAAgggaCCCAAACTTCAGATGAA
GAAGTAAACGCAGAATCTTTGCGAGAACCTGaagATCTTATCGAACCAGA
GATTTCAACCAACGTAGAATCATCTCCTGACATCGAAGaaTATTCCGAAC
GGTTTTCTTAACCAAAAATTAACCTGGATCTGGTTGAAATGTGCCGGACG
TCGATGGTTGGACGGGGAGACGTCGTGACGTGGTTTGAAGTGTTTTGACG
TAACGTATACCAACGTATACATTGACGTGACGTGACGCATACCAACGCAT
ACATTGATTTGATGTAACGCATACCAACGTATACATTGACTTGACGTGAC
GTGACGCATACCAAAGCATACATTGATTTGACGTAACGCATACCAACGTA
TACATTGACTTGACGTGACGTGACGCATAC
Run BLAST on NCBI

transcript from alignment at scaffold_451:1331267..1347735+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066197 ID=TCONS_00066197|Name=TCONS_00066197|organism=Clytia hemisphaerica|type=transcript|length=16469bp|location=Sequence derived from alignment at scaffold_451:1331267..1347735+ (Clytia hemisphaerica)
CCTCACTGTAAACCTCATTGATTGAGCAAGAtcagaaattaatttttcag
ctgttttgaaatttaaagtaTTTGAGAATGCCAAGTTTAATTTAAGtgat
ttttcttaaatatttttgtttgatatTCTTGGAAAATAAGTTTtgatgta
aaaaataatttagagCAATTTGATGAAATGGAGGTCCCAAAGATCATGAT
CAACGGTAAGTAAAAAGTGCAATCTTCAAAGCTTTTTAGTGATATAATGA
GACCaatcttataagaacacgaggctgaattttgagaacatcttaagaac
attttttaagaaGCGGGGGTTTtgagaacatcttaagaacaaaTTTTGTT
AGGACCCAGAGTATTATTAatatcttaagaacatttttgtaaGAACCTTC
GATGGGTATtgagaacatcttaagaacactTTTTTGTAATATTAAGAATa
tcctaagaacaaattatgtTAAATCCTTGGGCATTGATAACATAAAAAGC
CATATAAGCCTAAGAATCTAAACTAAGGCATCTGTTGCAATTTCAAACAG
CGTGGTCCCATGGtatttcttttcgaaaaaagggaaatttttcAAGGTAA
AGATTTCATGATTTCAACATTTGAGtatattgaaaatgaattttagGGAC
CAAATTTCTGGTAGGAGAGAGGGATGAAACTTCCGATTTCAAATTATACG
AgctaaaaaaatacatttaactTCAGATGTCCAAGGGACCAAAATTATTC
GAAATAAAGGGTAGCCGTGAGAAGGGGTATAAAGTATAAAAATCCTACTC
TATCATATAAGAATGCATTGCCAGAAAAAAAGTCGTTACATTACAAAACC
GTCTTACATATTATCAGgaaattgaaaactgaatgtataTTACCGAAACA
AATTTTTCTGCACATTTCATGAAATCATAATGAAAAATCCCGGAACAAAT
ATTTCTTGTTTCAGTAGATAGATAAGTACTACATGTAGTCTCCGCAAaat
atatatatggtgaagatcagagatctgaccctcaaggagagcaagtgttg
aaaatactaaataacataaagatgaaacatataaagggactaatattttt
ataattatgcgtgtttctctatttttttgaatttttctaaatatctaaat
ttaaccaatcaaacattctgtcaggaaatgagaattttatgcgaaaagaa
ccaacaaaccaatagacaaagtttaaaaagtcaaGCAGAAATATAAACAC
AGCAATCAGAGAAACACCgaaaaccactcaaaaacccaacaaaAATGTAA
TGTAATCTGGAGTCCCCGACAGTCGACAGGCGcagtgactttccacgtgt
ttaagaCTTTCTACGTGTTTAATGTATAGACAGTAGAGAAAACATATGAA
GGCCAATATCACATGTAAGGACAGGGCGTGAGCAGCATAACAAGCCATTA
AAATAAACCGCAAAGCACTCTTCTTTGGCTAACCAATCAATTAGATTTCA
GTTTTCAATTTTCTGATAATATGTAAAACGGTTTTGTAATTTAACGACTT
TTTTCTGCCAACTCATTCTTATATGATAGAGCAATACTCAATATTCTTTA
ATcgtttttaaagacttttaaaatttgggaaattatAGGTAATTTTATTT
AcgttaaaaaagaatttaaagaaaTCTTTGCCGCCGTATGTAGCTCATCA
CTGAAAACGTATTTCACTtaaaagacattgaaaaagcGGACATTAAAAAG
TGAAGTGAGCTGTTCTTTTTAtaatgtgaagaaattcaaagattttCTGT
CCGACTATCCTCTATCGGGAGATTAACCCTTGAACGACCGATGACGAGAT
ATAccgaaagaaaaaagaaatcgtctaaaattttctaagtctacaatcat
ggtgaaaatctattgagaatttagcttatttcctcgtttttcggaATTTT
GAGGTCGCGCGAGAAAGtagcttttgggctaattgataaatttattcgag
aatttcaattcgggaggggtttaaagacctccaggctatattctgagccc
tattggaccattatTGAACTTCTGGATCCTTAGATCCTAAGCTCTTAAGT
CTCTAGTCTTGCGttattcgaattctatcaaaagttacagcctttttttg
tctccgctgcaaattattttgagacataATAGAGAGATATTATGTGTATT
ATTGAGACTTCAAgaataagagaaaaaaacacaacatttctactttggta
tgtattttgATACATCCTGTACAACTGCTTGAATGTCAGAATTGATGACG
TAATGATGACGTAATGATCAACAACACTTCTCCGAACGTCCTTAAGGATG
AATACACTCCTTAATgacaaaaaatgacgtcatcttgtaGCAAGGACGAT
GCCTAGAAACAGAAAAATGTGGAAATCAGACATTCcataaaaggaaaaat
aaaaaaaagatgacTCACTCATGTGTCACTTCTCTTCAACTTTTCGTTTA
CACTGAATTGCCAAATCTTTGAAACTAATGAAGGCTAAAAACATTCAATG
CCAAAACACCACGCCTTATTTTGATCAGGTCTTTCGGCGCATGATGAATC
AAATTTATATCTGTGCACTTTGTGCAGGTTTCAGACAAATTCATAATATC
GTTATCTCCTTGCGGAAGTACTCGAAaaaatcgtgcatttttaacTAGTG
TTGATATCGAGGTTAAGCTTGAACTTATTTACGAGATAAAATTTACGACA
GTCACATCGATTCTGCTGCCCTTTCCTAGCGGTTTCTTAACTCCTTACTT
TAATCTATAACGTATCGAAATTACTAGACCGTAAATTTGCGAAAACCTCG
CGAAAAAAAACTCGAGCAATAGATCTAGTACGGCGTAGATGAATTTTAtc
ttaaaattacaaaaataattcTGGAGTGCTCTTCCCTTAAATGCGGCACA
TCCTCCCGTTCAAAAAATGAATGAGTGGATATGGGCGAGGTTGTTATTCT
CGATAGGGGTTAGACTAAAAATATATGAATGAAAATAGGTATCAAAAGTA
AAACAAGTATAACAAAAAGTATTAACTATTTAAAGTTATATAAAAGACAT
CCCAGCAGCGATTCTATTGTCACTTGGGCTTCCCTTTATTAAAgttacgt
gttttttataagaacaaaatatgaACGTAatgcttcaatggccaaaatat
taagaacaaagtaaagaacattttaaggctttatgggcTCAAAAACGGGA
AAACACCCAATTGCTTAGgaaataagaacattctaagaacatttttagac
ttaaaactcaaaaagttaagaacatccgaagtcttcaaaatctttggatg
ttctcataaaaaaaacgtgtattctatAAACAAATAAGTTTCTCTTAAAA
CGGATAAAAACAAGGGTGGGGTTTCATTAATTTCTTTCCCACTGCAGGGG
TTACAACTGGAGTAAACATAATATGTATTAATATCAATTAAGTAAATAAA
GTATTTaattgattgaatgaatattgatAATTAAATAAAGACAACACGGA
AGCgaaaagaaagttaattaaGATTAATTAGGCTGTATTAAATGAAAATT
GGCACAAACGACAAGGCTTTTTTTAGGGTGCGTCTACATCAACATTTTTG
TtgcattttctcaattttgtcCTTAGTTTTTGGCAGACCTTTAACGGCGT
GTCGGTGTCGTTGTGGCTGTCAAGGGGCGATGTCGTCTTTTTATGACGCT
ATACTAtagctgaaaagttttttaagctttaagTGTTTACtacatgttct
tatataagaacaaactatgtaagaacataacgAGAAAGTTATATTAAGAA
CAacgtaagaacattttaggcttaaaaagaaaatccatcggctttgaaaa
ttttggatgttcttataaaaaaacaaaaaaatttatgaaaatataaaaat
atttgacccTTATATGTATATTTTAAGTTTCAAAGGCATATCTTAAATAG
TTtttgaatcaaaattatatCGACTTCTGAGTCCCACTTGCTGAGCCTAA
AATTAcacaatttcaagcaatttaggggttaaagtagtaaaaattgggta
aaaaggcccaaaatacctcaatttaCTACAATTGTCACctataagaacag
gataagaacaacttgagaaaaaaaaaataagaacagccgagcctcaacaa
aaatttactggttcttatgaaaagaaaaatattttgtttattttgttggA
GTCTCTTTAGATCAAACCTCTACAAATTTTATGGTCTTTTCAGGTTTATA
TACCTTActccattttgaaattttccttaaaTCGAATGAATTTACGCTCC
CCGTGCGtgatcgagttatggagactctacccgggaaaggtttttacttc
tcgtttgtttgaaatagTTTCTATtgtgataattacagctgacaagaata
attgtctcagttttttttgaaacagaaaatatcCCAAGCTTCTTTggtca
cgcagatttacagctgaaaaatatagtgcactataagggttggatAAGTC
ATGaaaaaaatgcactgaaagggtacctattcagccatattgaactgcac
tgtaagggtacgattttgaaaagcagattttacGCGGCaaataccgtcgt
ttcgaaatcgattgccccccccccccccccNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNgagactctactgtataaaAGTAGCCTCCGAAATGCTGAAAG
CTGCAATATCCATTTCCCGGGTTCATTTGTACAATTATAACTAATGAAAA
CTAATTAGTTTTAAGATATGAATTATAACTAATTAGTTAAGTATATTTTT
GCTTGTTCCCATGCTTCCTGCACTCACAAAAAAAGATAATTTGGTCGAGA
CCAATATAATGGTGGAAACGCTAAAGAAATTACGAAATCACCCTAAgttt
tttgcagattttgcGCTAATTATCTTTATATAAGTGCTATAATGACCGAG
CGCTAAAGCACTACCAAAAAAGTATACAGCATGGAAAGATGTTtgggatt
tttttatttttgtgataGTTTGAAATGTGTTTAGATTTTTGGATTGTCCA
AGGATTTTCTTATATGTTtcatgatacacgttttttatgttttaaccaaa
tttttttgaaaccttttgaTGTCCTTAACTTTTTCGAttttaagcctcaa
aatgttcttattttcaaggttttgtgagtattttatACGGTATCCTATAA
AAATTCGGTGTTTTGGAGCCTCAAAGCCTTCTTGGTATTTAGGCGATCGA
AGCCTTATGAGTATATTTTGTAGTTCgctctcataaaaaaacatgatTAT
GCTGTCGCCATCTCAGACCGAACTCTTATATTAATCAAAGTTTTAGGAAT
TCGAATAACAGGAAtagagaccaatttgattagttgttttacgggcccga
ccgaccctgaaatttttattttcattgctttacagactcccaaattttca
aaattttcaaaattttggtagtttttgagaattttatgttcagtTTTcta
ttttatccatgaattcgaccTTGTCGtgcctttttattttctatttcaca
tttttgttgcttttttaggatattttatagatgaaattctacttttattt
ttaaaagaacaaattgaatTGGCCTCGCTTTAACTTAACATTGATTATGT
AATGaaatttctattgttatttgctctGATTCTTCGTGCAACAATGATAT
ACCCCTTGAAACCTCTTTACCTTTATCTTATCCCAAGTGGATATGCAAAG
GTGAAACAAGAGATTTTCATAGATGAGTGcaatctacaatcatggacaaa
atatttgagacaaagtggatccctgcgaaattttaaacaccaaaaatgat
ttttaagcgggTTAAACTAAAGTAGAATTTTGAGCGCGTTAAActaaagt
agaattttaactctgagttttaacatgagactttggaccttaggatctcc
gaatttaaaagctcaaatttgcaaGAATAaggcctagaagccaccgaact
cttccaaaatcgaaatatttaatatatattattgaaagaaagttgaagtg
ctaaaatagcaattctcgcccgaactttaaattctgaaaaacgtaaataa
aatacactaaaatgtcaatatatttcgaccatggtTGTACATTGTAAGTT
TCAGGAACACTTGGTCTGCCAACCAAACCACTCAGCCTGAATAAATTAGC
TCTATCAGTCAATAACAGCCTTTCATATCGAGTGACCTGTTTAACATTCG
Atggcgagtttatgtatgtgtgtttttctgcaacgccttttattttgttt
tgagcatcttgaccagctgaggacgacggtaaatcagtacTTTTACTGAT
CTCggttttgcgggtcagaactgcgggttgtTCAAAATCGCTGCAGTCAG
TCACTCTGTTGTGTTCGAAAGTGCAAATGAAGTGCAAAGTTCTCAATGAT
AGCTTGACGTTTGAAGTCTGAAAGGTTAACCAAATAGATCGAACAAAGAT
CCCTCGATAAACCGACCGAGAAATCTCTCGTTTACCGGTAAATAAGGTGG
AATAGAGACAATAAATCGATGTAAAGTGCCATCCATAAAGTACGTACATA
GTGAAGGGGTGgaggggggtttagcaaaagcgtacttctattgtttaaat
gacataatttctattgttctctgcgtacaaggggaggggtatcaaatttt
tggaaaatctttgcgtacgcgGCCCCTAACATCTTTGGTATATTGCTCGA
ATAAATGACAGAATTATGTCAATCAAAATGATCGTGCAAAAGAAGTGcaa
agttcttataaagaaatcgTCTATAGTTGAAAAAAGCTCACCCAGTAAGC
GACNTGcaaagttcttataaagaaatcgTCTATAGTTTAAGAAAGCTCAC
CCAGTAAGCGACATGTTTTGTCACGAGGTACTTAGTCTAAATATTTAGCT
CACAGGTTGTCATGGAGAGTGATCATGCTTGTAATTGCCAGTCTAAaaca
attattattattaaagaaACAATAGCTTCGGAATTTAACGNTGTAATTGC
CAGTCTAAaacaattattattattaaagaaACAATAGGTTCGGAATTTAA
CGATGCCTCTTTAAATAGCCTTCGTTCGCCTACACTTTTCAATCCTGatt
tattttaaattctttatACCGTGAGGTAGCGACAAGGGAGGTAAAACCAT
TTtctactttcatttttattttcatcatgCGTGTTTCCGTGGCTTGCGTG
CGACTCTGTTTTCGAAAGCTTTGGTTCGCACGCCTTATCTTGGCACGGTT
CATAATTTCTTTCTCTTGTATTAGATTGATCGCATTATTGAACATTGCTT
TCAATTTAATTGCATGCACGTTTATTGCGCAACTAATTCTTACGTCATTG
AATTAATCTTCCGATTTCTTTTTAGCCAGTTTTTACGTGCTATTTCTCCT
GCAGCAGAGGCTGTTCAGTTtttgatttgtctagatcctgactgactgag
aacAATGGTTTTATCAGTGCTTTTATCGTTTTCAATCTTGCAGGTCCAAA
ATTACGGGTAGCTTTTCTCGCTCAACAGCATATACTCGCTATATTCTAAA
CTTTGGCGAGATCAATTTGATGAGTTATTTTACGGCCCGACCGAACCTGA
AATTGTAAAAATCGAAATCAAAATAAGATTAATTTTGCtaatacattttt
attttcatttctttacaGACTCtcaaatgttcaaaattttggtagttttt
tcgCAAggatttgagaattttatgttcaatttttcattttatccacgAGT
TCGActttttttcgtatttttattttctatttctcaTTTTGGTCaggatg
tagtagtttttgctgccatTTTGGTTGATTTTACAGGTGAaattcacttt
tattttttcgccgcccgactgaccctcttttttgggtagcccgtaaaaca
acaaattaatatGGTCTCGCCTTAACGGCTTTTCGTAGACAAGTTAATGA
TTCATCCTTCTGAAATGCGTTGATTTCCAAGACCAGCAGATTTGTATATG
GATAATATCAATTTACTACTGATCTAGCAAAGATCCACGCTACCTAATCC
TTCTTTGTTTATACGGAGATTCGGGAAAATTGgggataaaaaattatttt
tcagtaatagaccttttttgaaaaattactttttagCTGCCTTGTTTTTA
CCCCGATAGTGAACATTTTTTTGGCGAGGAAGAATTTTTTACAAACCATT
CATCATCACGTTAAATACTCGTTTCTTAGAGAAATTGTGAAATAAATTCT
TCCGTTAAAGAAACAATTTTTGGTGTATTTATTTTGTGTTGCTTCCTTTA
AATcgaaaatttactttttataatgagTTTTTGATAGGGTGATAACAATT
TATAgatatttagttttttttccgAATCGCCAGTTAATTTCACAAGGAAA
TAAAAATTCTCTCGTCCATGAAATCAACTGTCAACTTATAATCTCAATGT
TGTCGCAATGTCGTTTTTGCCGAAAAGATTCGTTAAATCTTGGGTTTAGT
TGACAGTTGACAGAATTAAGATTCGTTTGATAGTACGACTACActacaaa
ctatataagaacataaggctcaAAAGaccaaaataataagaacatttaaa
ataaAGGGATTATGTAACCTACGTTATTGATGGACGCCAGTGAATTTTAT
CGAAGCTGATGATACGCCGGGATTGTTCCAAGACTTTATGAACTCTAAAA
CAAACATTCATTTTCTTAGGAAACTTGCTAAATGGTAAattaaagaactt
ttttaggcttgaaactcgaaaagttaagaacattcgataATATTTGGATG
TCTTATAAAACGTGTATACTACACACTCCACTTCGATGACATAACTTAAA
ATAGCTGAATATTCTATCGATCATTTTGATTGACATCAttctgtcattta
tttgagCAATATTGCAAAGCTGTTACATTGATTTATTGTCTCTATAGCTT
ATTCCGTCTTATTTACCATTAAGATATACGGTAAACGAAAAATTTCTCGG
TCGATTTATCGAGAGACTTTAGTTCGATTTATTTGGTTGATATTTCTGCC
TTCAAAAGTTGAATCTTCGTCtaaaattcattaaattctagtttttttgt
ttactgtTCAGTCCTTAAATCGAGGATACGTCACTATCTCGTATTCAAAC
CGAAATTTTCAGTCATTgttaaaattttatataaatCTCGGGTATTTGTG
TTGCATTGTTGCTATATtgatctctttttttttgtcgtttttcagccgaa
aatttttctctaaattttgttcaacttttaacattttttcgtTTAAATCA
ATATCTATTtacaatatttatatttatatttctCAATTCTAAGCCGAGCA
TTAAAAGTTCTATTTTCGTTTCAACGATTCTTATTTAGTCGTTGTTCGGT
CGGTCTGCCGAAAATTCTGGCTAGATCCGTTTAATCAGCCTAGTGGACCC
TCATTAAAACTGTCGTTAAAAACAAGGAGTAAACTTTGTCTAATCGcatc
ttcaaattttcacataGTATGTCTAAGCCgagtatttaatttttattttc
gttacGAATGTTTAGTCGTTACTCGGTCGGTCAGCCGAGAATTCTCGGTT
TATTATCGTTACATTGCAAATATATCGGTGGTAACCAATGCGAGTAATTA
CAAAAGAATCTTTCCTCGACAGCTATAAAAAACGCCTCCGCGTGGCAATC
AATGAACACATTCTCGATCGCACTTGTTCGTCAATATTATTGAGAGAGCT
TAGAATTGGTCTGCACGTCTTTTGGAAATTATATTTTCGAGTACACACAC
GTTGGCACACGTTGTTATTTTccattgttattatttttgagaagGTATAT
CCTAAACAATGCCACGTTGTAatcaatatatatttttctacaCACATTTT
ATTCCATACGTTTTTCATTGGAAAGACTCAACTTGGACTTAACCAGTTCA
ATCAACTAAGGATTCATTCAACCTGGGATGTTTCCATCCATTCATCATCT
ACCCTTattgtctttgaaaacttaatttcatatttttgaccATCAATTTG
ATTTGGTTTAGATTTTGCAGTACCAGAAaacttaatttcaatttttggat
cAATTTGATTTCGTTTTAGGTTCTGAATTACCATCAACACCAGTAGATAC
AACCAAAACTAAACCAGATTCAAAAACACCAGAAATGTCTTCAACCATTG
AACCTCGATCACAATCTGACGTCAAACCTGCCAACAAACCAAGAGGTTTT
GGAAGCATCTTGAGTTTCAGAAAGAAGAAAACTTACACGTTGAATGACAG
AGAAGCGGATGATTTGAAAATCGTTTCACACCCTGATAACGAAggtattt
aaaggttttatttttatataaagtgttcccgtttcatatcagacacatat
ttcatatcaggacagtgtcttgctattgttatattatgctgatataagca
aaaaaaaagttttcttttcctctttctgaccaatcttgctccacatacgt
gtcaatctaatgtaaaaaagcttgtaaataaaaattgatgagtaagcaaa
cgatatcactcttatttaaaaataaaagctttAATAACTATaccaaaata
ccaaattttaagaaacaagGTTTTTAATCTAAGAAATTAGAAATCACTTA
AGACACCCCCTACTCACAGATCCGGTAGGATATTTTCCGTCAGTGGGGGt
taaaataacggactgaaaattgatggggattgatatttccatatttacta
tgactggggatttatattctattgttttcaagtcagaaaattcagtaggg
GCGGGGAAAGTAGCATAACATTTTTGCAGTAAGGATTGATTTTTCAGGag
gaaaaaattagagtataattatCCACCGGCgacgatattttggcaaattt
tttcagtgggaaggggtcttAAGTTCCCCCTTTAAAAGGGATATTAATGC
TATTCTTCAGATTTTTGTGAAGTTAAATTTTGCCAATAATGCTTACCTTA
TCCGGAACCAGAGccatattttatttctttatgtTAACCGATttgtaaaa
tagaaaaacagcgAGAACACTATGTTTGAAAATTCTAGTTTGTCTGAAGA
TGAAAATTTGGTCGAAACCAAATTAGTTTTTTCCGTTTGCGAGAAAATTA
ACTTGcatgaaaaaatctaatttttggTTACTTTCTTATGTAATAGTGCA
TGCTTTTCCTTTTCCATTGATCTTGCAATTTCTGTAACTGAGATACAACA
TGACAACACTGCTGCTTCGGAAGTGAGAAGAAGGCCAATAttttcatctt
cctttattcttttgaaaatggaGTAAATAACAGACAAATACAGTAAAGAA
CACACACCCTcggtatttttgaaatttcatcaaagaaCATAAAAGCActc
tttctatcattctatgTTAGTGAAAAATTAGTCTCTGGTGAATTCTAATC
TTGAGATTAGAAAAATACGCTTGTTCTTCTTAATCTCACGCTcttagata
cacgttttttttataagaacaaattatataagaacataaaatgttaaaaa
caagttaagaaacattttaaggctttgcggaccttAACACACCAAATTTC
CTAGGAAactggacaaaaatactcaaaaaatggcgaaaacaaGAACATGT
TTAGAACCTTtgtaagcttaaaactcaaaaaaattaagaagatgttctta
tcaaaaaactCGTATGTGTGATGTAACGTGATCTACTCCCACTCACCGTG
TCCTGTCTTTGTCCGTTGTTTACTCCAATTTTCAAATGAATAAAGAAAGA
TGAAAATATTGGCCTTCTTCTCACTTCCGAAGCAGCAGTGTTGTCATGTT
GTATCTCAGTTACAGAAATTGTAAGATCAATGGAAAAGgaaaagttttca
ttatttgCTATTatgtataaatattttttaattcgtcGCATTGATTGTAA
ATGGATATCGGAAAAAACAAATCtggttggaataaaaaaaagatttttat
atcAAGACAATGCAGTCATTGTCTGCAGTTATTGTCTGCATATCTTTTCA
TGATAATTCAAATCCAAAACTGATCAAAAGTTTCCTAATCAATTGCTAAT
TTACATATCGTTTTTAGTATAGttctttgagagactttcgaggatTTAAA
AAAGGACCCTTATGCAAATACCTGACACCCATTTTGCTAAAGTACCAAGT
GCCCCTAGAGGAAACCAAATACGCAAGCCCTTCTTATTCCTGACATGAAA
CATTGCAATGAGCCCAGAACACGAAATTGTTGACCTTTTGTAGTTTTCCA
CTTAATACGTCaagtttttcataatttcagTGATATTTTCAAGGGGAGGG
GGAGGGGAGAATTTAGgaagcccagctggcacacaacgtcttttcatcgt
ttatctaacgttcacgacgtccatataacgctagtttaacgttgaaacaa
cgttgtgtgccatctGGGAAACATACAACGAGTATAGGCAAATAAAAGCT
CATAAACCTGCAAGATGCAGGCCATTTCACTTAAAGAATAACTTTCCATC
ttcactttaattttaaatGTGGCGGTTTAATCCTTCTGATGTGTTTTGGT
TGCCACGTCAGcagattagaaaaaattaatttccaaACTATCGAAAAACA
ATTACAGACTGTTTTAGatcattaaaaatgtttaaataaAAACTAACAAG
CTAAACACGGAAAAAATTCTCACAAATTGCTTTTAAATGTTTGTGTCGCT
ATCAGCTttcatttatttaattttctaaaatcagaggacatttcttaatt
tttaatctttaaggAAATCTTTCTCATCTGCTTATTTATCACGAAATTTT
TCCTTTATTGCAGGAGCGATGAGTTTCTTGTTTCAAGCAAACTTTGTTGT
TGTTATGGTCCTTTTTAGCTTTCTTCGGTGCGATTAACataatatacgtt
ttttttataagaacatccaaaatctttgaaacctaaaaatgttcttaact
ttttgagtttgaagtctgaaaatgttcctaacttgtCCATTTTTGGGGCA
TTTTTGcccatttccctaagaaatcgggtgttttagagtccacaaaactt
taaattgttcttaatattttggtcatcgaagccttgtgttcttacaaaaa
acgtgtattgctaattaaattgttatattgtgctgacataagcaaaaaag
gtttttgttttcctctttctgaccaatcttgctccacattcgtgtcaatt
caatgtgaaaaagcttgtaaatcaaaattgatgagtaagcagaCGATATC
ACtctattcaaaaacaaaacctttaaattatggattttaaatttaaagca
CACGCACTCAAGAAtgaggaaaaataattttaaacccCCTTAAATAAAAA
TGTGATGATGAATAAATGGTTTACTAATCTCCTGTGAGATTGTTTAAATC
CTGTGAGAAATattattgttttatttcaatCATGCAGGATTAACAAAAAC
CATAATTGATCATTACATTCGATCCGAGAAGGAagaagtgcaattttttc
ctcttttgaaataattttttcatttccaaCTATCTGGAAATAACTATTTC
AGGACATTCATCAAAAGGAAGgtgtaattttattttattttttttcaggg
aCCCAAACTTCAGATGAAGAAGTAAACGCAGAATCTTTGCGAGAACCTGa
aggtatatattttttctgtcggctttgTTTTCTTAcgataaaaaaaactt
gtactaAATGCGACTTGATGGTactgttgtttttgttgtctCCAATTcca
tttcatcgaataagggagcgaaTCGAATCGTAGAATGTCGAACTAGAGAG
TGTCGACTGTAATTTATAATTAtatgaaatgaaaatgtttatttCGGCCA
GTTGAAAGGAAATCCACCCTTTGTAATCTCACAAACACAATTATAATAAT
CCGGCTAATTTTGGCTCGTTTTGTTGCTAGACGGTCTCTCACTGATTAAA
TTTTAATATCTAAATCGGCGGAAATAATTTCCCATTTTCCTAAGCTGAAA
TAATCATTTAATACGTTAGCGTCCGACTACGAGTATACTGGTTGTACAGT
AGAGAGGTAAAAACACCGGTAGTATACCTTCAAAGGTCCATAACTTTTTA
TACAAAACCTTTTATGTTGCATTTTTTAAATCTACGTCAATTTGTATACA
ATTTGAAGGTATTTGATGCTAAACTGAGGccattagagcctttgaaactc
atttgatttaaaaaatacgAACGTCCCCGATTTTCATTTTAAGAAAGTTG
AAAACTAGTAAAATTTTAATAAGAAGCCGAGGCGGCCCAGCAAGCCGTTt
cttccgaaaaaaatttcaatcgaCAAACCGCGGGCGGCttctttaaaaac
ttaaaaacagaAAATACAGCGACATGAAAGGTCCGATGCTGAGCCGAATA
TTGATTACTTTATatgtaatacaccttttcgaccgtagctgctaattgcc
gcgtgggcatttttgtccattttaccaccctaaaaccgtcccagtctttt
tttcgcgcaTAAAGACAATAAAAATAAGTGTagaaaggattggatcgagt
ttagggtggtaaattaattaataaagtggcacgcgcctgaccgcgtgact
acgatcgaaaaggtgtacTGTTTATACGTTGAATTTTATCTTTTCACAGA
TCTTATCGAACCAGAGATTTCAACCAACGTAGAATCATCTCCTGACATCG
AAGGTGAGAATCcttcaattgtttttgttttttcttcattataatttttt
ttcatgaaaaccGAGATTTTCAATTCCTACGTCTAAAAATACAGTAAAAA
AGCAGCAAAGTTACCAGATTGCACTTCGATCTACACTTTATTGTTTTACA
TTGgtaaaatttcagcctcaatctAAATCGACATTTCTAAATGACCCTTA
CAAAACACATCTGCAGGGTGTccagaaaaaaagtatcgagttgcaccact
tctatagaaagaaagttcttgtgtgtgtttcactagatttgcaatgttta
tcaaagtttctttctgtgtcatattaattgtcatgagacatcttttatga
ataacttttacaaaaaacaattctcaataacttaaacgcagtgccgtagc
aaccaataattttttcaaaaatggttattctgcaaaatgcaaagtttttc
ttttttaatttgtcataattgtcacaattgagtgcactttcaagcaatct
agagctcaaattttcaaaatttcccccctcgggccaaaccatggttggcc
ctcgcggtgtcactaaacttcagccccccccccaatatggaaatgcttcc
tacggcactgcttaaacgtcatgaaaattgtaaagaaaattaattatttt
taatcacAAAAACTATTATTGTGTTTGTGtattatattttcttacatttt
gttaaacacacgcagCAACCTtttactcagaatcatgttcgaactcgata
cttcctttccggacaccctgtaattCGATCAAAAACTAAATATGCGTTAT
TGCATTTGCAATTATCCATAAAATAATCCTGTCTGTTTTTTCAAGAATCT
TCTGGGAGTAGAAACCCTTAGAGGAGTGAGGGTATTTTATGACAAATTCC
CAATCTGAAGCTACGGATAAAAATGGCTTacgaaaaaaaagtcaaaagtg
tTTATATATTCAACGAAAGTTTTTTGGTATAACTTACTTCAACTTCAACT
CAAAAACTATTTCTGCAACACAAATTTTACCACATACACACATACATGAC
ATAAATTTAAcatatttacaaatttagaaTATTCCGAACGGTTTTCTTAA
CCAAAAATTAACCTGGATCTGGTTGAAATGTGCCGGACGTCGATGGTTGG
ACGGGGAGACGTCGTGACGTGGTTTGAAGTGTTTTGACGTAACGTATACC
AACGTATACATTGACGTGACGTGACGCATACCAACGCATACATTGATTTG
ATGTAACGCATACCAACGTATACATTGACTTGACGTGACGTGACGCATAC
CAAAGCATACATTGATTTGACGTAACGCATACCAACGTATACATTGACTT
GACGTGACGTGACGCATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041427XLOC_041427Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066197-exon-scaffold_451-1491911889:1331267..1331471TCONS_00066197-exon-scaffold_451-1491911889:1331267..1331471Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1510915933:1331267..1331471TCONS_00066197-exon-scaffold_451-1510915933:1331267..1331471Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1575043694:1331267..1331471TCONS_00066197-exon-scaffold_451-1575043694:1331267..1331471Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1491911889:1341736..1341960TCONS_00066197-exon-scaffold_451-1491911889:1341736..1341960Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1510915933:1341736..1341960TCONS_00066197-exon-scaffold_451-1510915933:1341736..1341960Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1575043694:1341736..1341960TCONS_00066197-exon-scaffold_451-1575043694:1341736..1341960Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1491911889:1345265..1345318TCONS_00066197-exon-scaffold_451-1491911889:1345265..1345318Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1510915933:1345265..1345318TCONS_00066197-exon-scaffold_451-1510915933:1345265..1345318Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1575043694:1345265..1345318TCONS_00066197-exon-scaffold_451-1575043694:1345265..1345318Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1491911889:1346316..1346369TCONS_00066197-exon-scaffold_451-1491911889:1346316..1346369Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1510915933:1346316..1346369TCONS_00066197-exon-scaffold_451-1510915933:1346316..1346369Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1575043694:1346316..1346369TCONS_00066197-exon-scaffold_451-1575043694:1346316..1346369Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1491911889:1347444..1347735TCONS_00066197-exon-scaffold_451-1491911889:1347444..1347735Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1510915933:1347444..1347735TCONS_00066197-exon-scaffold_451-1510915933:1347444..1347735Clytia hemisphaericaexon
TCONS_00066197-exon-scaffold_451-1575043694:1347444..1347735TCONS_00066197-exon-scaffold_451-1575043694:1347444..1347735Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:1331267..1347735 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0.188084	0	0	0.000252101	3.68982	0	5.19064e-08	0	4.6221e-06	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066197 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top