|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067018 ID=TCONS_00067018|Name=TCONS_00067018|organism=Clytia hemisphaerica|type=transcript|length=644bp
AGTGGATGATTATTGGATCTCGTGTTTGTGTCCATGTTGTACACTCGCCC
AAGGAATGAGGgAAATCAAAGCGCACAGTGAAGCACCGAACCAGCAATTC
ATGGCAAGAGAATAATAAACCTTATCCATCTGGTAAAAGTATGAGGTGGT
TGTGGCAGGACTGTCAACCTGGATCAAGCCGAATACTGAGTAATCATTCG
TCAAATTTGAATGCATTTAGATGATCTGAAAACATGTAGCTTCATTTCTT
GATTTGCTAAAGTATGCTACTGGATTTGTAGGAATTATCATCCTGGCATC
AGGCATCAGACAATACAAATAAAAGCAACAGACAGCGAAAATAAAGAAAG
CCTTTAAACTTATTAGCTTGGGTTTAAAAGatgatagtttctttttcaaT
GGAAAGAACAAGCTGGCGTGTAAAACAAAACCTTGAATTTGATTGGATTT
AATTGGGAATGAAATATATGCCACGGAAAAGGAGATTTGATTTGAGTACA
TAACTCTAATTCTACctgtaaacgttttttataagagccatatattctta
actttttgagttttaagcagttagtcacactaggaaatctagctttcaga
aaaaacaacatcagtcatctacaggatgtatttgcacaacaagg Run BLAST on NCBI transcript from alignment at scaffold_462:886260..887369- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067018 ID=TCONS_00067018|Name=TCONS_00067018|organism=Clytia hemisphaerica|type=transcript|length=1110bp|location=Sequence derived from alignment at scaffold_462:886260..887369- (Clytia hemisphaerica)
AGTGGATGATTATTGGATCTCGTGTTTGTGTCCATGTTGTACACTCGCCC
AAGGAATGAGGGTAAGAATATATTATAAGCCTCGTGAAATACACACATAA
CAATATTTTCTCATTAAGACGTCTGCGTTCATCCATCAGACGGCACACCA
CCCCAACGCGGAACATGTCCTATATCGTCAAAGAAAATATCGAATCACTG
TCAAAACTGCTTATCTTGAATAAAAAAACATCCAGATAGATGGCAATTTG
AAATCTATATCTAAGGATGGGTTCTTACACGTTTCTTATGTATGTTAAAA
TTCCATTTTATTTTATGCTAAAATCTAAACATTTAACTTGACTATCTCTA
CTTAGGAAAATAATCATTTCAAAAAGTTTGGATGTTTTTCTCTGGACGAT
AGAAGCAAAAATAAAATAAAGTAAAGAAATATGGAACCATCAGAATATCC
CTTTAAGGATAAAAATTGGAGTAGGGTTTAGTGTTTAGTGATAAACTTTT
CTTTTCTTTTTATTTTTATTTTCACAGGAAATCAAAGCGCACAGTGAAGC
ACCGAACCAGCAATTCATGGCAAGAGAATAATAAACCTTATCCATCTGGT
AAAAGTATGAGGTGGTTGTGGCAGGACTGTCAACCTGGATCAAGCCGAAT
ACTGAGTAATCATTCGTCAAATTTGAATGCATTTAGATGATCTGAAAACA
TGTAGCTTCATTTCTTGATTTGCTAAAGTATGCTACTGGATTTGTAGGAA
TTATCATCCTGGCATCAGGCATCAGACAATACAAATAAAAGCAACAGACA
GCGAAAATAAAGAAAGCCTTTAAACTTATTAGCTTGGGTTTAAAAGATGA
TAGTTTCTTTTTCAATGGAAAGAACAAGCTGGCGTGTAAAACAAAACCTT
GAATTTGATTGGATTTAATTGGGAATGAAATATATGCCACGGAAAAGGAG
ATTTGATTTGAGTACATAACTCTAATTCTACCTGTAAACGTTTTTTATAA
GAGCCATATATTCTTAACTTTTTGAGTTTTAAGCAGTTAGTCACACTAGG
AAATCTAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTATTTG
CACAACAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067018-exon-scaffold_462-1575043694:887309..887369 | TCONS_00067018-exon-scaffold_462-1575043694:887309..887369 | Clytia hemisphaerica | exon |
| TCONS_00067018-exon-scaffold_462-1575043694:886260..886842 | TCONS_00067018-exon-scaffold_462-1575043694:886260..886842 | Clytia hemisphaerica | exon |
| TCONS_00067018-exon-scaffold_462-1510915933:887309..887369 | TCONS_00067018-exon-scaffold_462-1510915933:887309..887369 | Clytia hemisphaerica | exon |
| TCONS_00067018-exon-scaffold_462-1510915933:886260..886842 | TCONS_00067018-exon-scaffold_462-1510915933:886260..886842 | Clytia hemisphaerica | exon |
| TCONS_00067018-exon-scaffold_462-1491911889:887309..887369 | TCONS_00067018-exon-scaffold_462-1491911889:887309..887369 | Clytia hemisphaerica | exon |
| TCONS_00067018-exon-scaffold_462-1491911889:886260..886842 | TCONS_00067018-exon-scaffold_462-1491911889:886260..886842 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:886260..887369 - |
Blast
The following BLAST results are available for this feature:
|
