|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066937 ID=TCONS_00066937|Name=TCONS_00066937|organism=Clytia hemisphaerica|type=transcript|length=570bp
CATCGATTTGACTTGTATACATTCCAAATCCAGCCCTCAAATTTGATCTG
TAGTCTTTTGCCTCAAAGTATGAGAAGATGACGGTATTGTCTTGACTGTT
TGGTTTAGATGTATTACAAACTTGCATGACTCCTTTAAAAGACTTCCCAC
CGTGGTCTCCGCCTAGTTTAACATGTATTTCTTGATTCATTTAAGGATGG
TGAATGAGCTGGTTTTCGCTAAATGagatttttaaaacattgaGTTAACT
ATTGTTTCCAGAATCTGTGGGGATGTTTCTAATGTTATTCTATTTAGTTT
TTCAGAATAAGAACTActgcaattttgaaaaaattgatatttttaggtAA
GACTTACTTGTCAAGCTTGTCAACATAGTCAACAACAAATGACGGAAGAT
TCTTCACATGACTCCATGGTGCAGATAAGATGTGGACAATCCAAGATCTG
ACCTCATGGCAACGAGACTTTTTTCGTCTATGAACGTTGTGATATTCGCC
TTAGTCAAAATGCTGATTCGAATGTCACGGGAAAACGATTTTAAAAGCGA
TGCAGTTTGACATGCTGTTG Run BLAST on NCBI transcript from alignment at scaffold_462:985585..986420+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066937 ID=TCONS_00066937|Name=TCONS_00066937|organism=Clytia hemisphaerica|type=transcript|length=836bp|location=Sequence derived from alignment at scaffold_462:985585..986420+ (Clytia hemisphaerica)
CATCGATTTGACTTGTATACATTCCAAATCCAGCCCTCAAATTTGATCTG
TAGTCTTTTGCCTCAAAGTATGAGAAGATGACGGTATTGTCTTGACTGTT
TGGTTTAGATGTATTACAAACTTGCATGACTCCTTTAAAAGACTTCCCAC
CGTGGTCTCCGCCTAGTTTAACATGTATTTCTTGATTCATTTAAGGATGG
TGAATGAGCTGGTTTTCGCTAAATGagatttttaaaacattgaGTTAACT
ATTGTTTCCAGAATCTGTGGGGATGTTTCTAATGTTATTCTATTTAGTTT
TTCAGAATAAGAACTActgcaattttgaaaaaattgatatttttaggtAA
GACTTACTTGTCAAGCTTGTCAACATAGTCAACAACAAATGACGGAAGAT
TCTTCACATGACTCCATGGTGCAGATAAGATGTGGTATTGACCTTTTcta
tctttttttcaaataaaaaaggtgACATTTCCACGGCAAACAATCCACCA
GCCCACTCACGTGACACCTTACGTTGTTTATGATTTGAAGCCATTTCTAT
ATTAAAAGACAGCATACAcctgtaaaaaaattcattgaATTGACGATAAT
ATTCAGAATGATTAGTTTTTTAACCAGGAGATTTCAGCTatgtttttaaa
catttttaacgATGTTTATTTACCTTGCCATTGCTTTCATTTTTTCCCAG
GACAATCCAAGATCTGACCTCATGGCAACGAGACTTTTTTCGTCTATGAA
CGTTGTGATATTCGCCTTAGTCAAAATGCTGATTCGAATGTCACGGGAAA
ACGATTTTAAAAGCGATGCAGTTTGACATGCTGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066937-exon-scaffold_462-1491911889:985585..986018 | TCONS_00066937-exon-scaffold_462-1491911889:985585..986018 | Clytia hemisphaerica | exon |
| TCONS_00066937-exon-scaffold_462-1510915933:985585..986018 | TCONS_00066937-exon-scaffold_462-1510915933:985585..986018 | Clytia hemisphaerica | exon |
| TCONS_00066937-exon-scaffold_462-1575043694:985585..986018 | TCONS_00066937-exon-scaffold_462-1575043694:985585..986018 | Clytia hemisphaerica | exon |
| TCONS_00066937-exon-scaffold_462-1491911889:986285..986420 | TCONS_00066937-exon-scaffold_462-1491911889:986285..986420 | Clytia hemisphaerica | exon |
| TCONS_00066937-exon-scaffold_462-1510915933:986285..986420 | TCONS_00066937-exon-scaffold_462-1510915933:986285..986420 | Clytia hemisphaerica | exon |
| TCONS_00066937-exon-scaffold_462-1575043694:986285..986420 | TCONS_00066937-exon-scaffold_462-1575043694:986285..986420 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_462 | supercontig | scaffold_462:985585..986420 + |
Blast
The following BLAST results are available for this feature:
|
