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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067633 ID=TCONS_00067633|Name=TCONS_00067633|organism=Clytia hemisphaerica|type=transcript|length=1055bp
TGAAGATATAGGAAGAAAAATTTAGAATCGAGTGTTAAAAATTTGCTtgg
aaaaacgtcaaaaaaacaacacaaaagcATCATGAAGAATATGCAGAAAC
ATCACAAATGTATTATCCTTGTATTTTGTCTCATAACCGCCATATTCATC
ACACAAATTTTAGCGTTAGTCGAACAAACATGGTGGGCGTGTGATATCAA
CGCCAAAGCGCCCCTCCATAATTTAACCTTGGGTTCAAAAGATATTGTGA
CCGTATCAATCCGCATGAGGACTGGACTATCAGATGCTTGTTGGTATGTC
GAAGAAGTGGACTCGACGTCTGTGTTCAGTAATATTTTAATGTCATCTTC
ACCCATTAAGAAATGTTTATATGAAGATCTGATTGGTCGATTTAATGATA
CACAATGGATTgcaattgaaaatgaaattgaaacatCTAGATCAGCTTTT
GACAGCATTCGCTCTGCACTATTAGCCAGTATCATCTTCTGTGGATTATC
ATGGTTGATAGGAGCTGTCAATATCTTCTTATGTAATGGCTATCTCGTTA
TGGTGAATGCATTTATCATTTTCCCCGCTTCTCTTTCAACTATGACGTCA
TTCATTTACTCTACAACAAGACTCGATCATTACGCGTCATTTATCGATAC
TGAGAAAAATTATCTTCCTGACGCCATAACGTCAAGTGAATTCTTAACAG
AAAAAGGATATACCCTTGTTCGTATACTATACAATAAACTCGAAAAATCT
CCACAGATTTTCTACGATAATTGTGACAAAGGACGTGCTCATACGTATAC
TTGGGTATGCTTGATTCTGTTGATTCTTGCGTTTTTTATATGTATTGTTG
GACACATTTTGGGTATTAGATCGGGTGACCGTGATTATTATAAACCGCCC
TCGGGTGTCAATGGTGGAGATGGAATGGGCGTTTCGTCCTTTGATGATTT
GGATGAAAGTTTAGAGTGATTTCTCATAGAGTTTATATGGTGTAAATGAT
AAGGGGACGGCGTATTTTGAACGACATTGTTTTTTCAGCTACCATTTTAG
TGTGT Run BLAST on NCBI transcript from alignment at scaffold_472:72870..75637+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067633 ID=TCONS_00067633|Name=TCONS_00067633|organism=Clytia hemisphaerica|type=transcript|length=2768bp|location=Sequence derived from alignment at scaffold_472:72870..75637+ (Clytia hemisphaerica)
TGAAGATATAGGAAGAAAAATTTAGAATCGAGTGTTAAAAATTTGCTtgg
aaaaacgtcaaaaaaacaacacaaaagcATCATGAAGAATATGCAGAAAC
ATCACAAATGTATTATCCTTGTATTTTGTCTCATAACCGCCATATTCATC
ACACAAATTTTAGCGTTAGTCGAACAAACATGGTGGGCGTGTGATATCAA
CGCCAAAGCGCCCCTCCATAATTTAACCTTGGGTTCAAAAGATATTGTGA
CCGTATCAATCCGCATGAGGACTGGACTATCAGATGCTTGTTGGTATGTC
GAAGAAGTGGACTCGACGTCTGTGTTCAGTAATATTTTAATGTCATCTTC
ACCCATTAAGAAATGTTTATATGAAGATCTGATTGGTCGATTTAATGATA
CACAATGGATTgcaattgaaaatgaaattgaaacatCTAGATCAGGTATt
tacaaatatatttttattctagCTGATAATTTATAACTATTAGACTATAT
ATTCATTCTGTACAACCATAGTGTTGCTCTcgtttattgaaaatgaaagt
cacTTCTGTGCTGTTCTATGAACAGGTATTTATAAAGATCTTTTCAATTC
CAGtcaatatgttttttttgcatttcataggcacagatttataaagcgcG
AAGGGCTTGATATCGTATATGAAGCTTTTCcaagttgaaaaaaaataaac
atcgcaaaaaatattgttgctattgttttcgaaaaccctggAAACTTCTA
ATTCAAGTGCCGAAACTCTATTGTAATTGCAACGGCACACTCTCAGCCAA
ATCATAATGCCAATTCCttggggccgtccatatagtacgtacgcaaagat
tttccaaaaatttgataccccctccccccttgtacgcagagaacaataga
aattatatcatttaaacaatagatgtacacttttgctaaacccccctctc
cccccttcactgcatACGTACTACGTATACGtaccttcgggctttataaa
tctgtgttCATAAGCGAACAATCATAGCAGTGTGTTTTTCTTagtattga
aaattttaaaggtaCTTTAGCAACTCTTCATATTCTAAATGCGTTGTCAT
gaatttcaaaaacttcaaagaaaatttaaacgATAGGATCGAAGCAATTG
TGATACATAAACCCTTAAAttccagatgagatggagtttttataagatac
tttaataattggtcagcatttgaagtaataaaaatgacgcattctttaga
aaaagtaacacaattgttttattactggttaacgaccaaccaaatcaaat
aagtgcttgtaaaaactccatctcgccCCTTAAATTCTTCCGACTTCTTG
TCACGACGCGATACCTTATACGAAAATATCACACCAGGATTTTTGTCTCC
TTTCTTTTCAGCTTTTGACAGCATTCGCTCTGCACTATTAGCCAGTATCA
TCTTCTGTGGATTATCATGGTTGATAGGAGCTGTCAATATCTTCTTATGT
AATGGCTATCTCGTTATGGTGAATGCATTTATCATTTTCCCCGCTTGTAA
GTAGATCTTTGTTACCTACTTTGTTATAAATTAGTGGTTTTGAGATATTT
ATACTGAAACCTGGCTAACAACAGTTCTTCACAGCTACTCGAGTTTTCTG
GGCAGGCAAAAGATATATAGATGGCGAATCCAAATGTTTCCTGTTTTCTG
TCTATCATTGGAATTGGTCTGTaagatttttagtttttgtccTTTTATCT
CCTCACTGATAGTGCTTTTTCCAAATGCACTCACTGATAGTGCTTTTTCC
AAATGCACGAGGATCGAACCTTACACGGATTACGTCATTGTGAATCTCCG
CCTTGTCTTGAACCGATCATTAATAAGACGATTGAGTTCTATTGAGACAC
TCACAAACATTTGTGAAAAGAGTGCACCTCTAGGtaaataattcatgata
ttcatgacgtaatgttttctacggaaagaccccggctTTTGGCAggagtg
gcaaattttatacaagttttgtctagtttaaatttgccactactggctaa
aaccggggtatttccgtagaaaacattacgtcatgaatttcATGAATTCC
GTTGGGAATGAGCTGTGTTCTAAAATGAGGCACGAGTTATTCGTGACACA
ATTTATGCCTATGGTCCACTGATAAAGCGGAAGAAGACATGAATCAAAAT
GTACAATTTCgtgtttcaatattttataaaataacaatATTATTCTTATG
ACGTTTGTCTGAACAACTTCCACGTTTTTTCATATACTTTCAGCTCTTTC
AACTATGACGTCATTCATTTACTCTACAACAAGACTCGATCATTACGCGT
CATTTATCGATACTGAGAAAAATTATCTTCCTGACGCCATAACGTCAAGT
GAATTCTTAACAGAAAAAGGATATACCCTTGTTCGTATACTATACAATAA
ACTCGAAAAATCTCCACAGATTTTCTACGATAATTGTGACAAAGGACGTG
CTCATACGTATACTTGGGTATGCTTGATTCTGTTGATTCTTGCGTTTTTT
ATATGTATTGTTGGACACATTTTGGGTATTAGATCGGGTGACCGTGATTA
TTATAAACCGCCCTCGGGTGTCAATGGTGGAGATGGAATGGGCGTTTCGT
CCTTTGATGATTTGGATGAAAGTTTAGAGTGATTTCTCATAGAGTTTATA
TGGTGTAAATGATAAGGGGACGGCGTATTTTGAACGACATTGTTTTTTCA
GCTACCATTTTAGTGTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067633-exon-scaffold_472-1491911889:72870..73314 | TCONS_00067633-exon-scaffold_472-1491911889:72870..73314 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1510915933:72870..73314 | TCONS_00067633-exon-scaffold_472-1510915933:72870..73314 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1575043694:72870..73314 | TCONS_00067633-exon-scaffold_472-1575043694:72870..73314 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1491911889:74281..74415 | TCONS_00067633-exon-scaffold_472-1491911889:74281..74415 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1510915933:74281..74415 | TCONS_00067633-exon-scaffold_472-1510915933:74281..74415 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1575043694:74281..74415 | TCONS_00067633-exon-scaffold_472-1575043694:74281..74415 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1491911889:75163..75637 | TCONS_00067633-exon-scaffold_472-1491911889:75163..75637 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1510915933:75163..75637 | TCONS_00067633-exon-scaffold_472-1510915933:75163..75637 | Clytia hemisphaerica | exon |
| TCONS_00067633-exon-scaffold_472-1575043694:75163..75637 | TCONS_00067633-exon-scaffold_472-1575043694:75163..75637 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:72870..75637 + |
Blast
The following BLAST results are available for this feature:
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