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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067742 ID=TCONS_00067742|Name=TCONS_00067742|organism=Clytia hemisphaerica|type=transcript|length=1178bp
GTTGAAGACTCTGGTAATCGAAAAATGATGAGCAACATCCGAGAATTATG
CTGGGACATTCTGAGTCCAACTCTTGGTACTTTAGCATTCATCATAAATC
TgctagaaatatttttcatcattAAATTGAACAAGAAGCTGAATATTCCA
CTCATTTATATATTAAACTTGGCTATTTCTGATACTTTCATCGGCTTTAT
CGAAATACTGATTAAATTGTTATATTTCATCAACATCAACTACCCTTCGA
CACAAAGTAACCTTTACCTCGAGGTCTTCAACTTTCTGACCTATGTTGTT
TTAAGAATATCGTTGATTATTTCAGCCTTGAATCTGGTTGCAATAACGAT
CGACCGACTCTATTGCGTCGTAAGGCCGGTCCAGTACCGTAAAAACAGTA
AAAAGAAGGCTATTTTAATTTGCATTGGAATTTGGCTTGTATCTATTGTG
TTTTTGACTGCTTTTCACTACGGCTTAAAAAATCACGCTGACCCTTTGAC
AACATGGCGTTTACAGTTTATTTTATACCCAATCGTGATTTTACCAGCAG
CATTCTTGATGTCTGGGGTCTACTTCTTCATATGGTACTATTTCCGTAAA
AGCAATAAACGGATGACTAGACTTCAGGAGGAAACGTCGACAATCCAGAA
CCTTAGGAAACGCAAAGAAAAGAGACTATTGGTTCTTTCAGTAACTGTTG
TGGCAGCTTTTATGATCTGTTGGCTACCAATGGCTTTCTATTGGGTATTA
TTTATGTATTCAGTGAAAATGTCAGATGGAGTTAATATAGTATTCACAAT
CGCTATATCTAATTCGGTCATTAATCCTCTgatttactttcactttattc
GAAAATCAGTTTGGAAATGGTTTAAAGGCTTGTTTGAGaggtttgaaaga
aaaaaacagagAACCTTGAGTATTCGGAGGATGGACACTTCGACAACGAC
TCTGGCAACAAATGCTGAAGTTATTAGCCGGTTTTGATGTAAATATTCCC
TTACAACATAATTGACTTCGAAGCTTCAAATTGGCTATATAGACCCGAGA
CTCTTGGACTTGGATAGGAAATGATTTTCGATCTAAGAGATGAATGCACA
AATATGCACAGATACCCTTAGAAAAAGAcgttgaaaaaatttaattttct
gtcATCATTCAATTGCAAGAGAATGCCC Run BLAST on NCBI protein sequence of TCONS_00067742-protein >TCONS_00067742-protein ID=TCONS_00067742-protein|Name=TCONS_00067742-protein|organism=Clytia hemisphaerica|type=polypeptide|length=328bp
VEDSGNRKMMSNIRELCWDILSPTLGTLAFIINLLEIFFIIKLNKKLNIP
LIYILNLAISDTFIGFIEILIKLLYFININYPSTQSNLYLEVFNFLTYVV
LRISLIISALNLVAITIDRLYCVVRPVQYRKNSKKKAILICIGIWLVSIV
FLTAFHYGLKNHADPLTTWRLQFILYPIVILPAAFLMSGVYFFIWYYFRK
SNKRMTRLQEETSTIQNLRKRKEKRLLVLSVTVVAAFMICWLPMAFYWVL
FMYSVKMSDGVNIVFTIAISNSVINPLIYFHFIRKSVWKWFKGLFERFER
KKQRTLSIRRMDTSTTTLATNAEVISRF Run BLAST on NCBI transcript from alignment at scaffold_473:56124..57301 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067742 ID=TCONS_00067742|Name=TCONS_00067742|organism=Clytia hemisphaerica|type=transcript|length=1178bp|location=Sequence derived from alignment at scaffold_473:56124..57301 (Clytia hemisphaerica)
GGGCATTCTCTTGCAATTGAATGATgacagaaaattaaattttttcaacg
TCTTTTTCTAAGGGTATCTGTGCATATTTGTGCATTCATCTCTTAGATCG
AAAATCATTTCCTATCCAAGTCCAAGAGTCTCGGGTCTATATAGCCAATT
TGAAGCTTCGAAGTCAATTATGTTGTAAGGGAATATTTACATCAAAACCG
GCTAATAACTTCAGCATTTGTTGCCAGAGTCGTTGTCGAAGTGTCCATCC
TCCGAATACTCAAGGTTctctgtttttttctttcaaacctCTCAAACAAG
CCTTTAAACCATTTCCAAACTGATTTTCgaataaagtgaaagtaaatcAG
AGGATTAATGACCGAATTAGATATAGCGATTGTGAATACTATATTAACTC
CATCTGACATTTTCACTGAATACATAAATAATACCCAATAGAAAGCCATT
GGTAGCCAACAGATCATAAAAGCTGCCACAACAGTTACTGAAAGAACCAA
TAGTCTCTTTTCTTTGCGTTTCCTAAGGTTCTGGATTGTCGACGTTTCCT
CCTGAAGTCTAGTCATCCGTTTATTGCTTTTACGGAAATAGTACCATATG
AAGAAGTAGACCCCAGACATCAAGAATGCTGCTGGTAAAATCACGATTGG
GTATAAAATAAACTGTAAACGCCATGTTGTCAAAGGGTCAGCGTGATTTT
TTAAGCCGTAGTGAAAAGCAGTCAAAAACACAATAGATACAAGCCAAATT
CCAATGCAAATTAAAATAGCCTTCTTTTTACTGTTTTTACGGTACTGGAC
CGGCCTTACGACGCAATAGAGTCGGTCGATCGTTATTGCAACCAGATTCA
AGGCTGAAATAATCAACGATATTCTTAAAACAACATAGGTCAGAAAGTTG
AAGACCTCGAGGTAAAGGTTACTTTGTGTCGAAGGGTAGTTGATGTTGAT
GAAATATAACAATTTAATCAGTATTTCGATAAAGCCGATGAAAGTATCAG
AAATAGCCAAGTTTAATATATAAATGAGTGGAATATTCAGCTTCTTGTTC
AATTTaatgatgaaaaatatttctagcAGATTTATGATGAATGCTAAAGT
ACCAAGAGTTGGACTCAGAATGTCCCAGCATAATTCTCGGATGTTGCTCA
TCATTTTTCGATTACCAGAGTCTTCAAC Coding sequence (CDS) from alignment at scaffold_473:56124..57301 >TCONS_00067742 ID=TCONS_00067742|Name=TCONS_00067742|organism=Clytia hemisphaerica|type=CDS|length=987bp|location=Sequence derived from alignment at scaffold_473:56124..57301 (Clytia hemisphaerica)
TCAAAACCGGCTAATAACTTCAGCATTTGTTGCCAGAGTCGTTGTCGAAG
TGTCCATCCTCCGAATACTCAAGGTTctctgtttttttctttcaaacctC
TCAAACAAGCCTTTAAACCATTTCCAAACTGATTTTCgaataaagtgaaa
gtaaatcAGAGGATTAATGACCGAATTAGATATAGCGATTGTGAATACTA
TATTAACTCCATCTGACATTTTCACTGAATACATAAATAATACCCAATAG
AAAGCCATTGGTAGCCAACAGATCATAAAAGCTGCCACAACAGTTACTGA
AAGAACCAATAGTCTCTTTTCTTTGCGTTTCCTAAGGTTCTGGATTGTCG
ACGTTTCCTCCTGAAGTCTAGTCATCCGTTTATTGCTTTTACGGAAATAG
TACCATATGAAGAAGTAGACCCCAGACATCAAGAATGCTGCTGGTAAAAT
CACGATTGGGTATAAAATAAACTGTAAACGCCATGTTGTCAAAGGGTCAG
CGTGATTTTTTAAGCCGTAGTGAAAAGCAGTCAAAAACACAATAGATACA
AGCCAAATTCCAATGCAAATTAAAATAGCCTTCTTTTTACTGTTTTTACG
GTACTGGACCGGCCTTACGACGCAATAGAGTCGGTCGATCGTTATTGCAA
CCAGATTCAAGGCTGAAATAATCAACGATATTCTTAAAACAACATAGGTC
AGAAAGTTGAAGACCTCGAGGTAAAGGTTACTTTGTGTCGAAGGGTAGTT
GATGTTGATGAAATATAACAATTTAATCAGTATTTCGATAAAGCCGATGA
AAGTATCAGAAATAGCCAAGTTTAATATATAAATGAGTGGAATATTCAGC
TTCTTGTTCAATTTaatgatgaaaaatatttctagcAGATTTATGATGAA
TGCTAAAGTACCAAGAGTTGGACTCAGAATGTCCCAGCATAATTCTCGGA
TGTTGCTCATCATTTTTCGATTACCAGAGTCTTCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067742-exon-scaffold_473-1491911889:56124..57301 | TCONS_00067742-exon-scaffold_473-1491911889:56124..57301 | Clytia hemisphaerica | exon |
| TCONS_00067742-exon-scaffold_473-1510915933:56124..57301 | TCONS_00067742-exon-scaffold_473-1510915933:56124..57301 | Clytia hemisphaerica | exon |
| TCONS_00067742-exon-scaffold_473-1575043694:56124..57301 | TCONS_00067742-exon-scaffold_473-1575043694:56124..57301 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_473 | supercontig | scaffold_473:56124..57301 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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