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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067847 ID=TCONS_00067847|Name=TCONS_00067847|organism=Clytia hemisphaerica|type=transcript|length=1550bp
cccgcttattaagttttgtgaTAACGTTAACTGTAAATTTCTTTACATGT
CTAATAAATATTCGATGGGTTTGGTTGTGCTTTCTATCTAAAGAGCTAAG
GTAATGAAGCCCTGAATATACCTATTTTTATTCATTCGTTGTCTTTTATA
GGAACCACTGGATGAACCGATAATCGAAATCGTTCTCAGGTAGACAAGAC
CCTTAATTGTCAACTTGACTAAAACACGGCAGGAAAATCATTTATTCGCC
ATCAAAGCGCTAAGAATTATGCACCCGACTGTATCCACGGAGATCATTTA
TGCAAATATTTTTACTATTCCCctatatcagtgacccggtcagctCCACT
TGATGAATAACCCGGTGAAAGAAATTACATAGAACCCAAATCAAAGATCT
TATTTATGGTCTTACCCCCCAACAATCGTTAATCTTTTTAAGAATTCTTG
GAATATTACTTGAGTTTACTTTTTCCTTACCCGACGAAGTTAAAAGTTAT
CACTTAGTGAGTTTTGGAGAACCTATAGTCAGACCCGgtgggtttcaaaa
cttcactgggtcactgagaaaggggtgttctattatatatgaaatataaa
aatgtACGTCTATGTGCGCCAGTAAATGTCCGGGAAAGTGTATATCATCC
GTTTATGTCTACACGCTGGGGCTTTACAATAACCAAACAGAGTATCATCA
AATTTTACACTTGCGTTTGATTCCCAGTTTAGTGAAATCAGAGAGGTCAT
GTCGCAGTTATTGGTGAATTTTACCCAATGGAGAGAAGATAGAAATTCCT
GGGGGAAAGAGAAAGATCCATTAAGTAATTCAGTCATTTTTAAGGGTTGA
GTTTTTCAATAGAACTTCAAAAAGGAGATGAACTTGGACAATTCGGGGGG
AAATGAtgacaattttgaaaagttaacaAAGGTTTATCCCGTCACAATTT
TTCCCCGACTTAATTAAACCCCATATCTTCTTCCCCAATAAGATATTTTG
CAACAGAAATTTACGACTGCAATTTCCCGTGTTAGGTCCCACCGGGTTCT
GTGATACAAGTGTGTAGGGCAGATTATTATGTTCTACTGTTGCTCGCTTT
TCCTTTTGACATGTAATCGTTACAGCTTCGGTAAAACAACAAACGCAAAG
CAAATGCAGggtttgtttgttcttataaacttcgTTTCTTGATCCATCCT
GATTCCAAAGAGGACAAGGCCTAAAAATGAAATCGGAAAAACAATTAACT
GATAAGCACGTTGTTACTTAACACGATCCCACCAAACCGGTTTACTGCCT
AGTAATCGTAAAAATATACGTGAACATTTAACGAGCCGTAATTACTAACA
ACAGACagatatattttcatatttttgattttgaggcTAGCCGAAGTtat
tttttgctactttttggTATTCTTTGGTTCATTACTTTCGAAGGAAATAG
TTTTAGGTTGTGAAATTTTAACACATTAATTTGAGGGACTTCAAGATGAT
GTATAAGAAGTTTCATGCTCGTACGGTCAATATTTATTGcaaacgaaaac Run BLAST on NCBI transcript from alignment at scaffold_476:223819..225368 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067847 ID=TCONS_00067847|Name=TCONS_00067847|organism=Clytia hemisphaerica|type=transcript|length=1550bp|location=Sequence derived from alignment at scaffold_476:223819..225368 (Clytia hemisphaerica)
gttttcgtttgCAATAAATATTGACCGTACGAGCATGAAACTTCTTATAC
ATCATCTTGAAGTCCCTCAAATTAATGTGTTAAAATTTCACAACCTAAAA
CTATTTCCTTCGAAAGTAATGAACCAAAGAATAccaaaaagtagcaaaaa
ataACTTCGGCTAgcctcaaaatcaaaaatatgaaaatatatctGTCTGT
TGTTAGTAATTACGGCTCGTTAAATGTTCACGTATATTTTTACGATTACT
AGGCAGTAAACCGGTTTGGTGGGATCGTGTTAAGTAACAACGTGCTTATC
AGTTAATTGTTTTTCCGATTTCATTTTTAGGCCTTGTCCTCTTTGGAATC
AGGATGGATCAAGAAAcgaagtttataagaacaaacaaaccCTGCATTTG
CTTTGCGTTTGTTGTTTTACCGAAGCTGTAACGATTACATGTCAAAAGGA
AAAGCGAGCAACAGTAGAACATAATAATCTGCCCTACACACTTGTATCAC
AGAACCCGGTGGGACCTAACACGGGAAATTGCAGTCGTAAATTTCTGTTG
CAAAATATCTTATTGGGGAAGAAGATATGGGGTTTAATTAAGTCGGGGAA
AAATTGTGACGGGATAAACCTTtgttaacttttcaaaattgtcaTCATTT
CCCCCCGAATTGTCCAAGTTCATCTCCTTTTTGAAGTTCTATTGAAAAAC
TCAACCCTTAAAAATGACTGAATTACTTAATGGATCTTTCTCTTTCCCCC
AGGAATTTCTATCTTCTCTCCATTGGGTAAAATTCACCAATAACTGCGAC
ATGACCTCTCTGATTTCACTAAACTGGGAATCAAACGCAAGTGTAAAATT
TGATGATACTCTGTTTGGTTATTGTAAAGCCCCAGCGTGTAGACATAAAC
GGATGATATACACTTTCCCGGACATTTACTGGCGCACATAGACGTacatt
tttatatttcatatataatagaacacccctttctcagtgacccagtgaag
ttttgaaacccacCGGGTCTGACTATAGGTTCTCCAAAACTCACTAAGTG
ATAACTTTTAACTTCGTCGGGTAAGGAAAAAGTAAACTCAAGTAATATTC
CAAGAATTCTTAAAAAGATTAACGATTGTTGGGGGGTAAGACCATAAATA
AGATCTTTGATTTGGGTTCTATGTAATTTCTTTCACCGGGTTATTCATCA
AGTGGagctgaccgggtcactgatatagGGGAATAGTAAAAATATTTGCA
TAAATGATCTCCGTGGATACAGTCGGGTGCATAATTCTTAGCGCTTTGAT
GGCGAATAAATGATTTTCCTGCCGTGTTTTAGTCAAGTTGACAATTAAGG
GTCTTGTCTACCTGAGAACGATTTCGATTATCGGTTCATCCAGTGGTTCC
TATAAAAGACAACGAATGAATAAAAATAGGTATATTCAGGGCTTCATTAC
CTTAGCTCTTTAGATAGAAAGCACAACCAAACCCATCGAATATTTATTAG
ACATGTAAAGAAATTTACAGTTAACGTTAtcacaaaacttaataagcggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067847-exon-scaffold_476-1491911889:223819..225368 | TCONS_00067847-exon-scaffold_476-1491911889:223819..225368 | Clytia hemisphaerica | exon |
| TCONS_00067847-exon-scaffold_476-1510915933:223819..225368 | TCONS_00067847-exon-scaffold_476-1510915933:223819..225368 | Clytia hemisphaerica | exon |
| TCONS_00067847-exon-scaffold_476-1575043694:223819..225368 | TCONS_00067847-exon-scaffold_476-1575043694:223819..225368 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_476 | supercontig | scaffold_476:223819..225368 . |
Blast
The following BLAST results are available for this feature:
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