TCONS_00068489 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068489
Unique NameTCONS_00068489
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2994

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068489 ID=TCONS_00068489|Name=TCONS_00068489|organism=Clytia hemisphaerica|type=transcript|length=2994bp
GTCATGGCGACGACATCTTCGTCTCTCGAGCAGTATTTAAATGCTTTGTC
GCCCAAAAGCATCAATTACACGAAATGCACTCCAGCTACTTCCATTTACC
ATAAAATCTCACAACAGCCTCACAAGAAGAGACGTCTCGATCACCAAGAC
AAACAATGGTTCAATCTTGGTAACGGCCAAACATTCAATGACCCAATCAC
TGCTGCTGAATATCTTCTTGAAAGAGAATATGGTgagagttttcttttca
aacccAACCAACGACGTCCTGTTATCATTCCATCAGAATTCATGTCCAAT
CAATATCACAATGAGTCGAAAAGCGCTGTTTTAGATTTCAACATTGAACA
GACGGTGAAACAAACTCTTATTGATCTGCAGAAAAATCGTCCAAACTTCT
GGTTTACTGGTGAACTTGAAGCTTTTCTCCAAGCACACCCAATGAATCCT
GAAATCAACCAAAAAGAATTTGAGAGTTGGATCATCAAAGTCAAAGCAAT
TTATCTGATGAGGAAAGAGATCAAGCCTGAGGAAATACCACAGAATTTAC
CAATGATAAAACCTTCTGACTTCGTCAACATTTGCATCACCGAGTTGAAA
AAGAGTGCTCAAACATCTAGCTTAATAAATGGTTTCTCTGGTAGAAAAAG
TTTCAAGTACATCGCCAAAGAAGTAGTACGCTCGCCTCCACAAGACAGAA
CTGTGAAGTGGTTCTTTGATTTGCAGATATCTGACCGTGGAGAAAGTGCG
GAGCGGTCATTCTTCGACGAGCTGTATTCGTTAAAAGACGATGATATCCT
CAAAGATACAGTCATTTTATCTTCTTTGAACTTCTTGACTGATCTAGATA
ATAAAGAACATCAGGAATTCGATTTCCTCATCTTTTCGTGGAAACGAAAG
CTGATCATTGGAGTGGAAGCTAAACGACAACTCACCAATACCACAGCGTT
CAAACAACTCGATAAATACCGTTCTATATTCGAGGAGAAACTGGGCGATC
AACTCGGACCTGGTTGGACTTTCTACCCAGGAGTTTTTGTGGAAAAGAAA
GACAGTTCTTTGTCGACCACTTCCTCAAATAATCACTTTATCGATATGGA
TACTGACATTTATACCTGGATCTCGTCTGTTTTCAATTCATTCCCAGAAA
ACGTGAATGGTCAGTCGTTGGAGCAGTTGAAAAAAGTCCTTCAGATTATC
ATTTTCACCGTTCACATGTCCACCAAGGATAAGCCACGACTGGTAACCTC
TTCCTATTGGGTGGACTACATTTCTGATGTCATCGATTCCCTCTCCAGTA
CCCAAAACATCGTGTTTTATTCCCAACAGCAGCTCCCTTTGATGATTACA
AATGATCCTAAATACAATAAAGTTATCTTTATGGCTGGTTTTGGCACGGG
CAAGACATTTTTGCTTGAAGAAAAGGCGATTACGCTGAGTGAACAAGCAG
GATACCGAGGTGGAGTGTGTTATGTGGTTTGTAACGGGATGAGTCTGCAT
TATTATGAAAGGAAGCTCAAGTTGGAACAACATGGAATCAAAGTTGTATA
CGAAATTGAAGACTTACTCGACAAAACATCTCATGGTATATCTCATATCA
AAGCTATCTTCTTCGATGAATTTGATACTGTTCCGATAGACATTTTCAAT
GAATTGAAAACGCGTCTTTTGACTGAAATTCCAGTCTGTTGGGTCGCCCC
GAATTGTTCGTATCgagtgaactatgaactttcctCCATCAATAACGAGA
TTTGGGTTGACTTTCAATCTGTCAGTTTAAATTTGAATCTTAGAAACACG
AAAGAAATTGCAAATAAAGCGTTAAGCGTTGGTGAACAAAAGATTTATCG
ATATGCAGATGGCTTGTCGAGCCCACCTCTAAATTTTCCCAACGGTCCCA
GTCCTACATATGCAGCCTCCATTGATGATGCAATAAAGAAAGTTCGTGCG
ATAACAAAGAAGGGAATTCTGTTGGTCACAGATAACTATGCATTTAACTT
AAAGATAGATGAAAAAGTCAGATTTCATGATAAGTACCCGCCCCATAGAA
AAGACAGCCCAATAGATTTCTTGAAGAAGGGGGGCATTTTGGTCGCATCA
CGAGATGACATATCGGGTTTCGAATGGCCTGTGGTGATTTACCAGCTCAA
TAAAACAGACGAAGAAGATATAGATATAGAGCGACACGAATGCAATATGA
TATCCAGATGCACGTCCTTACTTTATATTGTTGGCGAAGAAAATAATACA
AATATCAATTATTTTCCTTATAACAAAATTCTTAAGATGCTGGAGCTCTT
GACAGCAGATAATACCATTACTAATCAATTCAAGCGTAGTACCAGGCATT
ACGTCTTCGATCACCTCCATAGATTCAATCGACGCGAGTGGCTGCAAGAA
CTTCAACCCATTTTAAAAGAAACAATTGAACAGATATCTCAAGTTAAAAC
CATCACTTTCTCGATGTTGGAAAAACTTTTGCTTTTTCTTATTCAAGACG
TTTTTAGAGATCAGGAGGCCGCATGGTTTTCTGTTCCCTGTGCGATGAGT
TTGCTGTTCGTGAAGTTTATCGATGAGACCGTTTCTTTTGACGAATGGCT
CAGCAAGTGCGTCAATATTAAATTCTTTTCCATGCTTGACAGTCATACTT
TGCTTACAAGGCTATCCGGAATATCCCCTGAAGGCAAAACAACAATGTGG
AAatactttgaaattgaaaacttgCCTGAAGTGCACCTACCcgaagtcaa
aattttgaagattttaaaatcagacagtGAAAATTTAAAACTGTTCAAAT
TTGTTCTCACAAATTACGTCTTCGATCACCTTGAACGTTTTAATCGACGC
TGGTGGCTGCAAGAACTTCAACCCGTTTTGAAAGAAACAATCGAACAAAT
TTCTCAAGCTAAAAACGATACCATCACCTTTTCGTTGTTGGAAAAACTTT
TGCTTTTCCTTATCAAAGATCTTACCGATTTTAACCATGCGCCG
Run BLAST on NCBI

protein sequence of TCONS_00068489-protein

>TCONS_00068489-protein ID=TCONS_00068489-protein|Name=TCONS_00068489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=998bp
VMATTSSSLEQYLNALSPKSINYTKCTPATSIYHKISQQPHKKRRLDHQD
KQWFNLGNGQTFNDPITAAEYLLEREYGESFLFKPNQRRPVIIPSEFMSN
QYHNESKSAVLDFNIEQTVKQTLIDLQKNRPNFWFTGELEAFLQAHPMNP
EINQKEFESWIIKVKAIYLMRKEIKPEEIPQNLPMIKPSDFVNICITELK
KSAQTSSLINGFSGRKSFKYIAKEVVRSPPQDRTVKWFFDLQISDRGESA
ERSFFDELYSLKDDDILKDTVILSSLNFLTDLDNKEHQEFDFLIFSWKRK
LIIGVEAKRQLTNTTAFKQLDKYRSIFEEKLGDQLGPGWTFYPGVFVEKK
DSSLSTTSSNNHFIDMDTDIYTWISSVFNSFPENVNGQSLEQLKKVLQII
IFTVHMSTKDKPRLVTSSYWVDYISDVIDSLSSTQNIVFYSQQQLPLMIT
NDPKYNKVIFMAGFGTGKTFLLEEKAITLSEQAGYRGGVCYVVCNGMSLH
YYERKLKLEQHGIKVVYEIEDLLDKTSHGISHIKAIFFDEFDTVPIDIFN
ELKTRLLTEIPVCWVAPNCSYRVNYELSSINNEIWVDFQSVSLNLNLRNT
KEIANKALSVGEQKIYRYADGLSSPPLNFPNGPSPTYAASIDDAIKKVRA
ITKKGILLVTDNYAFNLKIDEKVRFHDKYPPHRKDSPIDFLKKGGILVAS
RDDISGFEWPVVIYQLNKTDEEDIDIERHECNMISRCTSLLYIVGEENNT
NINYFPYNKILKMLELLTADNTITNQFKRSTRHYVFDHLHRFNRREWLQE
LQPILKETIEQISQVKTITFSMLEKLLLFLIQDVFRDQEAAWFSVPCAMS
LLFVKFIDETVSFDEWLSKCVNIKFFSMLDSHTLLTRLSGISPEGKTTMW
KYFEIENLPEVHLPEVKILKILKSDSENLKLFKFVLTNYVFDHLERFNRR
WWLQELQPVLKETIEQISQAKNDTITFSLLEKLLLFLIKDLTDFNHAP
Run BLAST on NCBI

transcript from alignment at scaffold_485:210661..216081+

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068489 ID=TCONS_00068489|Name=TCONS_00068489|organism=Clytia hemisphaerica|type=transcript|length=5421bp|location=Sequence derived from alignment at scaffold_485:210661..216081+ (Clytia hemisphaerica)
GTCATGGCGACGACATCTTCGTCTCTCGAGCAGTATTTAAATGCTTTGTC GCCCAAAAGCATCAATTACACGAAATGCACTCCAGCTACTTCCATTTACC ATAAAATCTCACAACAGCCTCACAAGAAGAGACGTCTCGATCACCAAGAC AAACAATGGTTCAATCTTGGTAACGGCCAAACATTCAATGACCCAATCAC TGCTGCTGAATATCTTCTTGAAAGAGAATATGGTgagagttttcttttca aacccAACCAACGACGTCCTGTTATCATTCCATCAGAATTCATGTCCAAT CAATATCACAATGAGTCGAAAAGCGCTGTTTTAGATTTCAACATTGAACA GACGGTGAAACAAACTCTTATTGATCTGCAGAAAAATCGTCCAAACTTCT GGTTTACTGGTGAACTTGAAGCTTTTCTCCAAGCACACCCAATGAATCCT GAAATCAACCAAAAAGAATTTGAGAGTTGGATCATCAAAGTCAAAGCAAT TTATCTGATGAGGAAAGAGATCAAGCCTGAGGAAATACCACAGAATTTAC CAATGATAAAACCTTCTGACTTCGTCAACATTTGCATCACCGAGTTGAAA AAGAGTGCTCAAACATCTAGCTTAATAAATGGTTTCTCTGGTAGAAAAAG TTTCAAGTACATCGCCAAAGAAGTAGTACGCTCGCCTCCACAAGACAGAA CTGTGAAGTGGTTCTTTGATTTGCAGATATCTGACCGTGGAGAAAGTGCG GAGCGGTCATTCTTCGACGAGCTGTATTCGTTAAAAGACGATGATATCCT CAAAGATACAGTCATTTTATCTTCTTTGAACTTCTTGACTGATCTAGATA ATAAAGAACATCAGGAATTCGATTTCCTCATCTTTTCGTGGAAACGAAAG CTGATCATTGGAGTGGAAGCTAAACGACAACTCACCAATACCACAGCGTT CAAACAACTCGATAAATACCGTTCTATATTCGAGGAGAAACTGGGCGATC AACTCGGACCTGGTTGGACTTTCTACCCAGGAGTTTTTGTGGAAAAGAAA GACAGTTCTTTGTCGACCACTTCCTCAAATAATCACTTTATCGATATGGA TACTGACATTTATACCTGGATCTCGTCTGTTTTCAATTCATTCCCAGAAA ACGTGAATGGTCAGTCGTTGGAGCAGTTGAAAAAAGTCCTTCAGATTATC ATTTTCACCGTTCACATGTCCACCAAGGATAAGCCACGACTGGTAACCTC TTCCTATTGGGTGGACTACATTTCTGATGTCATCGATTCCCTCTCCAGTA CCCAAAACATCGTGTTTTATTCCCAACAGCAGCTCCCTTTGATGATTACA AATGATCCTAAATACAATAAAGTTATCTTTATGGCTGGTTTTGGCACGGG CAAGACATTTTTGCTTGAAGAAAAGGCGATTACGCTGAGTGAACAAGCAG GATACCGAGGTGGAGTGTGTTATGTGGTTTGTAACGGGATGAGTCTGCAT TATTATGAAAGGAAGCTCAAGTTGGAACAACATGGAATCAAAGTTGTATA CGAAATTGTAAGTATACATAGAATCTAATTTTTCACATATTATTCTCGAA TGGTAATTAATGTCTGTGTCAAAAAGGTgtgcagtgtttttatttttggc cataactttccaaacagtttggtaataataataatatttctcttttatca cccctTTTGAGGTATATCTAAAAATATCTACAAAACCGTATATACATTTA AAAAGCTGTCACCGTAAATGGTCTGTATAAATATACGAAATTTTTCTCCC GTTATGAGACGGCCCctggttgaaaaaataaaagatacaGAAGGAATTTA GTTGAAGTTGGGAGATTAATAGAGCCTGAACTACACAAAAGACCAAGAAT TTGAAAAGAGGTTTAGCGAACTAGCAAAGGGCTAGGCACATTTATCCTTC TTCCTAGGAGTATTGTCTCGGAAGGAAATAACTAGTCTAGGGAGAAAACA caatatgaaatatataaatGAATATTAATGGAACTAATAAAGATTCAGTT ATAAGAATACTTAAAAGGGCCTAAAAAATTGACTAAGTCATAAGAATACT GAAAAGGgcctaaaaaaaaattgactaagtttgtcaaagttagaagctga agTTTAGTTGTTTAAATATCAAAaatgttggaaagatatttaaatGCCCT TATATTTCTAGTacttagtttttcaaaattcatgcaagaaattgtaagtt ttttcttttactcATGACAACCTGTCGTCAGCCCGGCCTGcaaatcaatc aaaatactttttggacctatcTGGAGGtcctaaaaataattttttataaa aaatctttctggccgaaaatgccggaagttTGCCAGAGAAGccgtttttt ttgcattttctcgagatttcatcatttgtttttttccgatttctaaaaat cgccggaacattCGAGAATCGCCGGAAGAACGGTTTGTCTTGAATTTTTC GAGctatactttatattttttcatgaaattttgcgcaCCGATGCAAagtg gcaatacctaaaatgtgaaggagtctgatttttgagaaaaaaaattttcg gccaaaaatgccggaaaaaccggggtttttttcattttctcgatttttca tcattagtttttttcttaagttttgcacaaagatgtaaaTTAGCAATGCC TTACATACCAACATTACAAAAAATTGCTCAACTTTATACAGTACCgcaag tggattaattttgctGGAAATTAAATCTGGCAGATTTCGGTAAATTAAAT CCTCGCTAAAATTTTCATCGTCGCCAAAGTTTAGGAATAAAACAATGTAT GAAAATTATCACTTTTGCGTTGATTTCATGCATTTGCATTTTTCATGAAT TCTTGTTCCTCCAATTTCCAAAtgcgccaaattaaatccttgtCAAAAGT CGTATTTTGGTCATTCGTGAAATTTGATCCATGCAATAATGTATCCACTT GAggataaaatgaaaatgcaCATCTCCGAATATCTTGAGGAACGAgcata aataattttttctttcgggCTTTTCGGGTCAGAACTTTGTGTCCATTTGC CGACATGCCTTTATTGCATTACCTTTGCGCAGCACCATCCGAATTTTTGT TACTTTAGTGCGCTGGAATGTTGagcaatttttttgtgaaattgagcCCA AGCACACAAATGTATTAGCAATGATAATGCCCAATGATATTTtgcgtttt tggacctaccccagtggaggtcctttaaattaatcgttgttcgttcgttc gtaaTGAGTTTTTCTccagattggctcattcaatttttccgaTATTTTGC GCaaagaatcaaaatgataaaccctcgaatgttttgaatcatttctgatt tttttgcatgaagacAGAGCACCATCATAAGGAAGAAATGGTCGAAGTAG ATTTtcgtagaaaaaaattttcggctcagaaaatgaatttctagctataa gaatcactattttatAAACTGGGCTAAATTCttaatttatttataagcac attcgaaaaaaacattttactggCATGAAGAGCTTAAAAATTGTCATATT CCGCTGAAATACAGTGTCCTTTTTGCTGGGATGAATTTTTACAAGTCTAC TTTTCATTATTTggaaagatgcaaaatggtcaATCCcggaatgtgacgga gcccgattttcgaaaaaaaatttggtccatttgggccaaaatatgcccaa tatgtgttttttttcgagattttatcattcgAATCAAAAGATTGCCTAAA AGTCCTAAATTACTTGTATACAACTAAATAAATTACCTTTTTACGCAAAC AAACcctattattttttattttgatcagTTATGTCtaatgtgtttcattg ttttaatgttcattgattatttttgataaccaggtaggaccataaaagta tcgcttgtttattttcaattgttttcttttgtaGGAAGACTTACTCGACA AAACATCTCATGGTATATCTCATATCAAAGCTATCTTCTTCGATGAATTT GATACTGTTCCGATAGACATTTTCAATGAATTGAAAACGCGTCTTTTGAC TGAAATTCCAGTCTGTTGGGTCGCCCCGAATTGTTCGTATCgagtgaact atgaactttcctCCATCAATAACGAGATTTGGGTTGACTTTCAATCTGTC AGTTTAAATTTGAATCTTAGAAACACGAAAGAAATTGCAAATAAAGCGTT AAGCGTTGGTGAACAAAAGATTTATCGATATGCAGATGGCTTGTCGAGCC CACCTCTAAATTTTCCCAACGGTCCCAGTCCTACATATGCAGCCTCCATT GATGATGCAATAAAGAAAGTTCGTGCGATAACAAAGAAGGGAATTCTGTT GGTCACAGATAACTATGCATTTAACTTAAAGATAGATGAAAAAGTCAGAT TTCATGATAAGTACCCGCCCCATAGAAAAGACAGCCCAATAGATTTCTTG AAGAAGGGGGGCATTTTGGTCGCATCACGAGATGACATATCGGGTTTCGA ATGGCCTGTGGTGATTTACCAGCTCAATAAAACAGACGAAGAAGATATAG ATATAGAGCGACACGAATGCAATATGATATCCAGATGCACGTCCTTACTT TATATTGTTGGCGAAGAAAATAATACAAATATCAATTATTTTCCTTATAA CAAAATTCTTAAGATGCTGGAGCTCTTGACAGCAGATAATACCATTACTA ATCAATTCAAGCGTAGTACCAGGCATTACGTCTTCGATCACCTCCATAGA TTCAATCGACGCGAGTGGCTGCAAGAACTTCAACCCATTTTAAAAGAAAC AATTGAACAGATATCTCAAGTTAAAACCATCACTTTCTCGATGTTGGAAA AACTTTTGCTTTTTCTTATTCAAGACGTTTTTAGAGATCAGGAGGCCGCA TGGTTTTCTGTTCCCTGTGCGATGAGTTTGCTGTTCGTGAAGTTTATCGA TGAGACCGTTTCTTTTGACGAATGGCTCAGCAAGTGCGTCAATATTAAAT TCTTTTCCATGCTTGACAGTCATACTTTGCTTACAAGGCTATCCGGAATA TCCCCTGAAGGCAAAACAACAATGTGGAAatactttgaaattgaaaactt gCCTGAAGTGCACCTACCcgaagtcaaaattttgaagattttaaaatcag acagtGAAAATTTAAAACTGTTCAAATTTGTTCTCACAAATTACGTCTTC GATCACCTTGAACGTTTTAATCGACGCTGGTGGCTGCAAGAACTTCAACC CGTTTTGAAAGAAACAATCGAACAAATTTCTCAAGCTAAAAACGATACCA TCACCTTTTCGTTGTTGGAAAAACTTTTGCTTTTCCTTATCAAAGATCTT ACCGATTTTAACCATGCGCCG

Coding sequence (CDS) from alignment at scaffold_485:210661..216081+

>TCONS_00068489 ID=TCONS_00068489|Name=TCONS_00068489|organism=Clytia hemisphaerica|type=CDS|length=5988bp|location=Sequence derived from alignment at scaffold_485:210661..216081+ (Clytia hemisphaerica)
GTCATGGCGACGACATCTTCGTCTCTCGAGCAGTATTTAAATGCTTTGTC
GCCCAAAAGCATCAATTACACGAAATGCACTCCAGCTACTTCCATTTACC
ATAAAATCTCACAACAGCCTCACAAGAAGAGACGTCTCGATCACCAAGAC
AAACAATGGTTCAATCTTGGTAACGGCCAAACATTCAATGACCCAATCAC
TGCTGCTGAATATCTTCTTGAAAGAGAATATGGTgagagttttcttttca
aacccAACCAACGACGTCCTGTTATCATTCCATCAGAATTCATGTCCAAT
CAATATCACAATGAGTCGAAAAGCGCTGTTTTAGATTTCAACATTGAACA
GACGGTGAAACAAACTCTTATTGATCTGCAGAAAAATCGTCCAAACTTCT
GGTTTACTGGTGAACTTGAAGCTTTTCTCCAAGCACACCCAATGAATCCT
GAAATCAACCAAAAAGAATTTGAGAGTTGGATCATCAAAGTCAAAGCAAT
TTATCTGATGAGGAAAGAGATCAAGCCTGAGGAAATACCACAGAATTTAC
CAATGATAAAACCTTCTGACTTCGTCAACATTTGCATCACCGAGTTGAAA
AAGAGTGCTCAAACATCTAGCTTAATAAATGGTTTCTCTGGTAGAAAAAG
TTTCAAGTACATCGCCAAAGAAGTAGTACGCTCGCCTCCACAAGACAGAA
CTGTGAAGTGGTTCTTTGATTTGCAGATATCTGACCGTGGAGAAAGTGCG
GAGCGGTCATTCTTCGACGAGCTGTATTCGTTAAAAGACGATGATATCCT
CAAAGATACAGTCATTTTATCTTCTTTGAACTTCTTGACTGATCTAGATA
ATAAAGAACATCAGGAATTCGATTTCCTCATCTTTTCGTGGAAACGAAAG
CTGATCATTGGAGTGGAAGCTAAACGACAACTCACCAATACCACAGCGTT
CAAACAACTCGATAAATACCGTTCTATATTCGAGGAGAAACTGGGCGATC
AACTCGGACCTGGTTGGACTTTCTACCCAGGAGTTTTTGTGGAAAAGAAA
GACAGTTCTTTGTCGACCACTTCCTCAAATAATCACTTTATCGATATGGA
TACTGACATTTATACCTGGATCTCGTCTGTTTTCAATTCATTCCCAGAAA
ACGTGAATGGTCAGTCGTTGGAGCAGTTGAAAAAAGTCCTTCAGATTATC
ATTTTCACCGTTCACATGTCCACCAAGGATAAGCCACGACTGGTAACCTC
TTCCTATTGGGTGGACTACATTTCTGATGTCATCGATTCCCTCTCCAGTA
CCCAAAACATCGTGTTTTATTCCCAACAGCAGCTCCCTTTGATGATTACA
AATGATCCTAAATACAATAAAGTTATCTTTATGGCTGGTTTTGGCACGGG
CAAGACATTTTTGCTTGAAGAAAAGGCGATTACGCTGAGTGAACAAGCAG
GATACCGAGGTGGAGTGTGTTATGTGGTTTGTAACGGGATGAGTCTGCAT
TATTATGAAAGGAAGCTCAAGTTGGAACAACATGGAATCAAAGTTGTATA
CGAAATTGAAGACTTACTCGACAAAACATCTCATGGTATATCTCATATCA
AAGCTATCTTCTTCGATGAATTTGATACTGTTCCGATAGACATTTTCAAT
GAATTGAAAACGCGTCTTTTGACTGAAATTCCAGTCTGTTGGGTCGCCCC
GAATTGTTCGTATCgagtgaactatgaactttcctCCATCAATAACGAGA
TTTGGGTTGACTTTCAATCTGTCAGTTTAAATTTGAATCTTAGAAACACG
AAAGAAATTGCAAATAAAGCGTTAAGCGTTGGTGAACAAAAGATTTATCG
ATATGCAGATGGCTTGTCGAGCCCACCTCTAAATTTTCCCAACGGTCCCA
GTCCTACATATGCAGCCTCCATTGATGATGCAATAAAGAAAGTTCGTGCG
ATAACAAAGAAGGGAATTCTGTTGGTCACAGATAACTATGCATTTAACTT
AAAGATAGATGAAAAAGTCAGATTTCATGATAAGTACCCGCCCCATAGAA
AAGACAGCCCAATAGATTTCTTGAAGAAGGGGGGCATTTTGGTCGCATCA
CGAGATGACATATCGGGTTTCGAATGGCCTGTGGTGATTTACCAGCTCAA
TAAAACAGACGAAGAAGATATAGATATAGAGCGACACGAATGCAATATGA
TATCCAGATGCACGTCCTTACTTTATATTGTTGGCGAAGAAAATAATACA
AATATCAATTATTTTCCTTATAACAAAATTCTTAAGATGCTGGAGCTCTT
GACAGCAGATAATACCATTACTAATCAATTCAAGCGTAGTACCAGGCATT
ACGTCTTCGATCACCTCCATAGATTCAATCGACGCGAGTGGCTGCAAGAA
CTTCAACCCATTTTAAAAGAAACAATTGAACAGATATCTCAAGTTAAAAC
CATCACTTTCTCGATGTTGGAAAAACTTTTGCTTTTTCTTATTCAAGACG
TTTTTAGAGATCAGGAGGCCGCATGGTTTTCTGTTCCCTGTGCGATGAGT
TTGCTGTTCGTGAAGTTTATCGATGAGACCGTTTCTTTTGACGAATGGCT
CAGCAAGTGCGTCAATATTAAATTCTTTTCCATGCTTGACAGTCATACTT
TGCTTACAAGGCTATCCGGAATATCCCCTGAAGGCAAAACAACAATGTGG
AAatactttgaaattgaaaacttgCCTGAAGTGCACCTACCcgaagtcaa
aattttgaagattttaaaatcagacagtGAAAATTTAAAACTGTTCAAAT
TTGTTCTCACAAATTACGTCTTCGATCACCTTGAACGTTTTAATCGACGC
TGGTGGCTGCAAGAACTTCAACCCGTTTTGAAAGAAACAATCGAACAAAT
TTCTCAAGCTAAAAACGATACCATCACCTTTTCGTTGTTGGAAAAACTTT
TGCTTTTCCTTATCAAAGATCTTACCGATTTTAACCATGCGCCGGTCATG
GCGACGACATCTTCGTCTCTCGAGCAGTATTTAAATGCTTTGTCGCCCAA
AAGCATCAATTACACGAAATGCACTCCAGCTACTTCCATTTACCATAAAA
TCTCACAACAGCCTCACAAGAAGAGACGTCTCGATCACCAAGACAAACAA
TGGTTCAATCTTGGTAACGGCCAAACATTCAATGACCCAATCACTGCTGC
TGAATATCTTCTTGAAAGAGAATATGGTgagagttttcttttcaaacccA
ACCAACGACGTCCTGTTATCATTCCATCAGAATTCATGTCCAATCAATAT
CACAATGAGTCGAAAAGCGCTGTTTTAGATTTCAACATTGAACAGACGGT
GAAACAAACTCTTATTGATCTGCAGAAAAATCGTCCAAACTTCTGGTTTA
CTGGTGAACTTGAAGCTTTTCTCCAAGCACACCCAATGAATCCTGAAATC
AACCAAAAAGAATTTGAGAGTTGGATCATCAAAGTCAAAGCAATTTATCT
GATGAGGAAAGAGATCAAGCCTGAGGAAATACCACAGAATTTACCAATGA
TAAAACCTTCTGACTTCGTCAACATTTGCATCACCGAGTTGAAAAAGAGT
GCTCAAACATCTAGCTTAATAAATGGTTTCTCTGGTAGAAAAAGTTTCAA
GTACATCGCCAAAGAAGTAGTACGCTCGCCTCCACAAGACAGAACTGTGA
AGTGGTTCTTTGATTTGCAGATATCTGACCGTGGAGAAAGTGCGGAGCGG
TCATTCTTCGACGAGCTGTATTCGTTAAAAGACGATGATATCCTCAAAGA
TACAGTCATTTTATCTTCTTTGAACTTCTTGACTGATCTAGATAATAAAG
AACATCAGGAATTCGATTTCCTCATCTTTTCGTGGAAACGAAAGCTGATC
ATTGGAGTGGAAGCTAAACGACAACTCACCAATACCACAGCGTTCAAACA
ACTCGATAAATACCGTTCTATATTCGAGGAGAAACTGGGCGATCAACTCG
GACCTGGTTGGACTTTCTACCCAGGAGTTTTTGTGGAAAAGAAAGACAGT
TCTTTGTCGACCACTTCCTCAAATAATCACTTTATCGATATGGATACTGA
CATTTATACCTGGATCTCGTCTGTTTTCAATTCATTCCCAGAAAACGTGA
ATGGTCAGTCGTTGGAGCAGTTGAAAAAAGTCCTTCAGATTATCATTTTC
ACCGTTCACATGTCCACCAAGGATAAGCCACGACTGGTAACCTCTTCCTA
TTGGGTGGACTACATTTCTGATGTCATCGATTCCCTCTCCAGTACCCAAA
ACATCGTGTTTTATTCCCAACAGCAGCTCCCTTTGATGATTACAAATGAT
CCTAAATACAATAAAGTTATCTTTATGGCTGGTTTTGGCACGGGCAAGAC
ATTTTTGCTTGAAGAAAAGGCGATTACGCTGAGTGAACAAGCAGGATACC
GAGGTGGAGTGTGTTATGTGGTTTGTAACGGGATGAGTCTGCATTATTAT
GAAAGGAAGCTCAAGTTGGAACAACATGGAATCAAAGTTGTATACGAAAT
TGAAGACTTACTCGACAAAACATCTCATGGTATATCTCATATCAAAGCTA
TCTTCTTCGATGAATTTGATACTGTTCCGATAGACATTTTCAATGAATTG
AAAACGCGTCTTTTGACTGAAATTCCAGTCTGTTGGGTCGCCCCGAATTG
TTCGTATCgagtgaactatgaactttcctCCATCAATAACGAGATTTGGG
TTGACTTTCAATCTGTCAGTTTAAATTTGAATCTTAGAAACACGAAAGAA
ATTGCAAATAAAGCGTTAAGCGTTGGTGAACAAAAGATTTATCGATATGC
AGATGGCTTGTCGAGCCCACCTCTAAATTTTCCCAACGGTCCCAGTCCTA
CATATGCAGCCTCCATTGATGATGCAATAAAGAAAGTTCGTGCGATAACA
AAGAAGGGAATTCTGTTGGTCACAGATAACTATGCATTTAACTTAAAGAT
AGATGAAAAAGTCAGATTTCATGATAAGTACCCGCCCCATAGAAAAGACA
GCCCAATAGATTTCTTGAAGAAGGGGGGCATTTTGGTCGCATCACGAGAT
GACATATCGGGTTTCGAATGGCCTGTGGTGATTTACCAGCTCAATAAAAC
AGACGAAGAAGATATAGATATAGAGCGACACGAATGCAATATGATATCCA
GATGCACGTCCTTACTTTATATTGTTGGCGAAGAAAATAATACAAATATC
AATTATTTTCCTTATAACAAAATTCTTAAGATGCTGGAGCTCTTGACAGC
AGATAATACCATTACTAATCAATTCAAGCGTAGTACCAGGCATTACGTCT
TCGATCACCTCCATAGATTCAATCGACGCGAGTGGCTGCAAGAACTTCAA
CCCATTTTAAAAGAAACAATTGAACAGATATCTCAAGTTAAAACCATCAC
TTTCTCGATGTTGGAAAAACTTTTGCTTTTTCTTATTCAAGACGTTTTTA
GAGATCAGGAGGCCGCATGGTTTTCTGTTCCCTGTGCGATGAGTTTGCTG
TTCGTGAAGTTTATCGATGAGACCGTTTCTTTTGACGAATGGCTCAGCAA
GTGCGTCAATATTAAATTCTTTTCCATGCTTGACAGTCATACTTTGCTTA
CAAGGCTATCCGGAATATCCCCTGAAGGCAAAACAACAATGTGGAAatac
tttgaaattgaaaacttgCCTGAAGTGCACCTACCcgaagtcaaaatttt
gaagattttaaaatcagacagtGAAAATTTAAAACTGTTCAAATTTGTTC
TCACAAATTACGTCTTCGATCACCTTGAACGTTTTAATCGACGCTGGTGG
CTGCAAGAACTTCAACCCGTTTTGAAAGAAACAATCGAACAAATTTCTCA
AGCTAAAAACGATACCATCACCTTTTCGTTGTTGGAAAAACTTTTGCTTT
TCCTTATCAAAGATCTTACCGATTTTAACCATGCGCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042718XLOC_042718Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068489-proteinTCONS_00068489-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068489-exon-scaffold_485-1491911889:210661..212217TCONS_00068489-exon-scaffold_485-1491911889:210661..212217Clytia hemisphaericaexon
TCONS_00068489-exon-scaffold_485-1510915933:210661..212217TCONS_00068489-exon-scaffold_485-1510915933:210661..212217Clytia hemisphaericaexon
TCONS_00068489-exon-scaffold_485-1575043694:210661..212217TCONS_00068489-exon-scaffold_485-1575043694:210661..212217Clytia hemisphaericaexon
TCONS_00068489-exon-scaffold_485-1491911889:214645..216081TCONS_00068489-exon-scaffold_485-1491911889:214645..216081Clytia hemisphaericaexon
TCONS_00068489-exon-scaffold_485-1510915933:214645..216081TCONS_00068489-exon-scaffold_485-1510915933:214645..216081Clytia hemisphaericaexon
TCONS_00068489-exon-scaffold_485-1575043694:214645..216081TCONS_00068489-exon-scaffold_485-1575043694:214645..216081Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:210661..216081 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.254777 0.298138 0.15866 0.197557 1.71791 1.08601 5.32279 6.19442 1.62095 6.68828 5.14957 2.11252 8.55694 7.04759 6.99484 9.64128 4.8102 4.19516 7.3396 6.95767 5.53018 4.99234 2.78977 4.05012 7.56347 9.58213 5.10051 3.95206 1.01802 0.633844
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068489 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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