TCONS_00068688 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068688
Unique NameTCONS_00068688
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4918

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068688 ID=TCONS_00068688|Name=TCONS_00068688|organism=Clytia hemisphaerica|type=transcript|length=4918bp
TTCTTAGCTTTTACAAAGATTTATCGCTAGAAACCATCTTGTCCTTTGAT
AGAGGGCTTTAGTACTGCATAAACGAacattgattttgttttccGATTTG
TTTGGGGAAGAGTCAAAAACAAACTGAGAAGACATTTTTAAACCTGCAGA
CAAGAATCTTTGTTTACATCTACCCTTGGCATTGTAAAACCATCATTAGA
GATCACCACTTTGGATCTCTAATTCAAATTGAGAGTGCTTGTAAAATTTC
CCTTAGATTGTAGCGTTTTCAATACTACAAGAACGTTTTCGGGTGAAGAA
GCATGAAATTTTTGAGAACTAATCGCCCTCTTGTTACCATCGCGGAAATA
AATTCTTTGGACACGCATAAGATTCAACAAGAATCCAAAAGTGAAAAGAA
AGTGTCGGTGACATCGAGCAGTAGCGAAGCTGAAGAAGAATATTTCAACG
AAACCGAcaacgaagatgaaaaacatGCCGGCAAtcccaaaacaacaaaa
tacagcGAAAAACTAAAAGAAATGATCGCACCCATGTCAACTAAATTCAA
CCTACACAAAGAATATAAAAAACTTGAATACCTGTGTGCTTTCTTTGCTT
GCGCGTCACACCGTACGAACGTTATCTTACGTTCGCTAGGTGCGTTATCA
TGGCTTGCTAGCGTCGTTATTCATTTTGCCTTCGACGTTAACGAGGCCAT
AAAAGTCTACGGCTACACCTTCTTAGCAGCGCAGTTCTTCTGGTTGTTGA
ACTTCGTGGTTGGCACCCTAGCTATGCGTTATCGTGTGTTACCATGGTTA
CTCGAAGGAATGAAAGAATTAAGACACGATGAATGTTATGAAAAAACAAT
CACAAATGTGCTCAGAATGGTTAAGaaaattccGTATTGGGTTCTCGCGT
TCGGATTTGTCGGCTCTGGTGCCCAACACCTTTTCTTATATATCGATGAT
GCGTTTAACGGTTCCTACAATTCATGGATGGAATCTAAAATCGTGGCCTC
AATACTCTTGATCGTACGTTTCGTAACAGCCGCTCATATTTACAGCGCTT
ACCTGTTGTTTTGGATGGGTCCAACTGCGGTAATGATGGCGTGTGGTTAC
GCTATGTCCGAGTTCTTAGATCAATTCGATGCAAAGATTCGAGACACAAA
CCGAATAACATCATTCAAAGAAGCCATCTCGTTGTATTCAAAACGCGCCA
AATTCGTCAAAACCTCTTCCTCCAAGTGTTTAGTTATCTTATCCATGCAA
TTACTATCTGTCGTCATTTGTTTTGGTTTAAACACATACGTCTTCTTATT
CTCGCCTGTTAGAAGATATTTGCATGTTTGGCACTCCATTGTCCCACTAC
TCATCATGGTTTACCCACTATGCACTGCGGCATGGGTTACTAAACAGTAC
ACTTGGTTTATTATAGTTGTTGTACGAGCTTGGGTGCATCGTGACGATTT
AGATTCATCATCCAGTGATGAAGATTCAGGAATTGATGAAATGAAAACGA
GTCAAGATAAAAAGACATTCGCAGGGAAAAGTCCTTTCTTCTCTAAAAAG
AAACTAGACGAGTCTATTAGTTCTTCAGTTGCTGGCATCTTCAAAAGCGG
CCGCCCAAAGTCTGCGCATTTCGATTCGCAACGGAAACTGTCTGGATTCA
GGCGATCATCAAGTGTACAAATTAAGGACCGTAATAAAAGGAAATCAACG
CAAAATCTCATGCCTTGGCAGAAAGCAGTAGCTGAGAAACAACTTTCTGA
TCCGGGAAATATCGTTGGCTCGACTACCTCAATAAACAGTGTGCCTCGAT
TTGCTTCAACCGTTGCTGCGGCAACTGCTATAAACAAATTTAAGAATGTA
AAAAACAGACCGAGATTCAATTTCGAgaaatttttatcttatttagagAG
CATGCGTAGTGTGGTTGGGTTCTCCATCTCAGGGATTATGGTCACGTGGG
ACTTGGTCTCCACCACactgtttttattgttttccaTCATAGCTGTTTTC
ATGCAGGAATCAATCTTTGGCGATCAAAAAAGTACGTTGACTTCTTGATC
TGACTACAACATAAGACCCTGTCCACACGTTGCATGGTGTGAATCCTTTT
GAAGACAATGGAATCATTCAAATTGGCGTGTTTGGGATTGAttttattta
tcttatttttatttataaaaccgATATCGTGTGCTAAATGTAAATCCAGC
CCAATTTTTTGGAACAGCGCGATTAAGAGTTATTAATTGCATCCAAACAC
TACCTCTTTGAGCTTTGGCCCACTGGGCCTTTTTCCTTAATCTAGTGCTG
TAAAATAAGTCGACATTTCAAAATTGGACTAAGTATTGATCCTGTTTTTG
TGGAATTTGCTACTGTGTGCTACTACCattggataccccttaaaatcaca
taccccttaaaacctacaaagttgcACTTTGGGCTCTCTTAGccaccaaa
cttaatttaataGTATAATTCACTTTTCTACTACCTGTTATAAATTTgct
ttcataaaatacctaatttcgAGAATTCAATTATCGCGAAGTATcgtaaa
attcgaagttatttgaaaattcaagtttTTCGAACCTAGAGATTGCACAA
TTGAGTTTATAGTCATAAAACCGATACTTTTTAGGTACCTATttatggta
ggtatgaaaaaaatcattttcttcttcatgatTAGACTCAACCGAAATCG
TAAGGCCCTGAAAGTTCTATTTCAAGGCTCATTATAGTAGTGGCCAATAA
AATCTggaaatcgactttctcaaaacctggtcattctgtataccaaaatg
tcacaaattcgatggagatttagaaaaacattagtaccatacgtcaaaaa
tgaagttaataaaagttttgaccctTCAAGGtcgttttttgaagaaaaaa
acaagtgCAATTGTATTATGGgtatgaaatcctgaaaaatacaaatacac
gttttttttttataagaacaaactatataagaacataaggcttcgagccc
aaaaatttaagaacattctaagaacatactaaggctttggagacttaaaa
acatgcaatttcttaagaaattacatcaaaatgctcaaaaaatgctgaaa
ataagaaaattttaagaacatttttaggcttcaaattcaaaaaactaaga
acatccgaaggcttcgaaaattttcgatgttcttataaaaaaaaacgtgt
attgtttTTGGAATGGATTTCcagcaagtatttgatcaattgaatcacgg
TTTAGCACCTGGATTGCAATTTCACAGTCTCAGTATGTTGTGAGTAAGGG
GTcaatgtttgtaggttttaagatGTAATAGTGAAGATTTTAAggcatat
tttgattttaacgtacagttttgaaaGTATTTAGGTACCAATGATCCAAT
TGTAACGGtagtaactttgcagtgaatcactgtataaaattttagaccaa
acggactattttataaaaagttattcgagaaaaaccattttgtcaaaagg
acattttttcatgaaaaactgaaaactggttTCTACGAAACATCACTACT
AGGGAAGAAAACCATTGACagcgtactttcaacacaaaaagtttcagcct
caaatTCCACCTAAATTTTCAGATAGAGGGTACCTCTATTACTTGTAGGT
TTAAGGGGTACCCACTGGTATAGTTTCGAGAGATAAATACAAAGTCTAAA
CTTATCTAGCATATTTATATGGCAGGGCATAACCCTATGAATGTGAAAAA
ACATGGGTCAATAAACTTAAAATAAATTGTagatatttttttagaaataa
ttatttaacataatttaaagtttgatatgaaagaattttttcatCCCTAT
CCTCGAAACAAAACTTCTACTCGTAAGTTCAATGTCGCAAGTTTTGTTCT
GTTTGACgaagaattttattatttttgttaacTGGATATTGTCAAGAGCC
AGATCAAAGCTTTACAAGTGTTTGCGGCTTCTTAGtgaaaaataactttt
ctgCTGCTTCATATAATAAGCTCTCCTCCATTCCGTCATACAGTCAGTCT
AATTGACATCAATGTTCCTTGTTTACATACAATGACGTATGACTAAAAAA
ACACATTGACCTTCTTAGCTTCAACAAAACTTAACCACGAGTTGCCGATT
TCATTTAGGTTTCATGATTACCAAAAATTACACCGTGGAACACAGAACCA
CAATTCATGATATCCACGAGGTAATGTTTTTAAGGAAACACCTCGGTTTT
TTCCAGTAGTGGCAAACTTTGAACGGAAAAGAACGGGGAGTTTCcgtaga
agaaaaaaatattgcgtCATGAATATCACAAATACAACTTGCTTCTCTAA
TGAATGGAATGATGATGCCAATACATAAATTCGCTGGTTGGTGAACTCAC
ATGTCAATGCAACATAATAATGTAGACAGGCTAGCCACAAGTTCAGCATC
CAATGTCCATTCTATGGTTTTATTCGGTTCAACAAATGAATCACCATCAA
ACTTGGTAAAGGTCTAACTtattctttgatgtaccattgtctcattttaa
tgattttaaatCCAAAAGCTGTGAAGACTTCTTCTTCCGTAGATCTTGAA
TACCTTCCAATTGGAGATTCCTTCTCGTTCAACCAGAGCCCTCTTCCATC
CAGATATCACTTTCCATTCAACTTGGTAAAGGTTCCATGCTTGTTTTGAT
ATCATGATCTCTCTGTAAAACTTCATTATTGTTCAATAGCCTTTTCCTCC
TTTTGTAAAACTTATACACGATATAAACTCCAACACCAAGAATGAACAAG
ATGACAATTCCAACGATTACAAAAGCGATCTTGGTTTCACTTCGCGTTGC
ATCTCCTGTTAATGATGGATCTTCAGATTCTGATGAGCTACTCATTTTCT
TTCAATACTTGATGATCT
Run BLAST on NCBI

transcript from alignment at scaffold_487:29502..40623+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068688 ID=TCONS_00068688|Name=TCONS_00068688|organism=Clytia hemisphaerica|type=transcript|length=11122bp|location=Sequence derived from alignment at scaffold_487:29502..40623+ (Clytia hemisphaerica)
TTCTTAGCTTTTACAAAGATTTATCGCTAGAAACCATCTTGTCCTTTGAT
AGAGGGCTTTAGTACTGCATAAACGAacattgattttgttttccGATTTG
TTTGGGGAAGAGTCAAAAACAAACTGAGAAGACATTTTTAAACCTGCAGA
CAAGAATCTTTGTTTACATCTACCCTTGGCATTGTAAAACCATCATTAGA
GATCACCACTTTGGATCTCTAATTCAAATTGAGAGTGCTTGTAAAATTTC
CCTTAGATTGTAGCGTTTTCAATACTACAAGAACGTTTTCGGGTGAAGAA
GCATGAAATTTTTGAGAACTAATCGCCCTCTTGTTACCATCGCGGAAATA
AATTCTTTGGACACGCATAAGATTCAACAAGAATCCAAAAGTGAAAAGGT
ATAATttgtattttgtaaaaatttcacttttgtaAAATTGCCTCGATATT
TTCTCAAGGAACGTCGTTTGAAATTAATGATAATTTTGTAATTTCgtgaa
aaatctttgatcattTTGTATTTCTAAAGTCTTTGacaatgtttcatttt
tcaaaagaatcgtttattgttttgatgttcgTTTTTCAAATGAAATCTTT
CTCACATAATTTTGTAAATCTCAAAGATAACCTTAACAGATCTTTTATTA
TTGTTTCTTTcccaagaaaaatatttgaaaattttatttttctgaagGAA
GATCTTAAAGCCTCTTGTATCTTTGACACtgttgtatttttcaaggaaaa
tctaTTTTTGTTTCTCCCTGGCCCTCTCAGTTTCTCATGGAAAATGTTTG
ACGATGTTGTATTTCTAAAGGAAAAAGTTTGACGATGTTGTATTTCTAAA
GGAAAATCTTTTATCATTTTGAGACTCCAAGGAACAATATTATGCAAGGT
ATAATTTTTTAATGGAAACCTTTGATCATATAGTTTTGGTTATGTCTTCA
GCCAAAACGAATAGTGTCTAAGATGTCATAAAAAGAGCAAACTCTTAGCT
ATCAAAGGAGATCTGAACCCTATTCTAAAACTATCCAAGCCTATTTATTC
CCTACTCTCATCCAATTCGATCAATGATTAGATTTACCAACCagatacag
cacctgaccccgagaatgtagtaaaccccgagaatgtaggtttctcattt
tttagcattgtagccctaacgatagttcaacttcataaaaatttgNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNatcaacattttactattactagatttaaagccataaaaccaaacctac
attctgggggctataacgaaaatgggagtcaacttcaaggaccaaaaaaa
ttggtgtatctatcaaaagtaatgaaactaacccctgggaaaggattttg
ggagttcaaaatttcgttgaaaatatttaatatcttttaaaatgcaaatc
taTATCTTTCacgtctgattcaaatttcacctacattctcggggtcaggt
gctgtacctTTTCACACAAAACTTGTCCTGAtcattttttgatgaattta
gTCCTCTGTGACGTCACTATTAGGTTCTGTTTATCTTTATAATAGACAGG
GGGTCAGTGAGTTTGTTTAACTTATCTCCTCATGTTTTCTTGTTTCATTA
TTCATGAAAATTGTTCttgtttataagaataatgTTTTGATGATGAACAA
TATTTCTTATAAGAACTTGATTAAGCATTAAATATTCCAATCATTAAATA
AAGCGGGGATTAGCTCCGAATTTAAATCTAGGATCGTAattatattcaaa
atgaaatgtACCCTCTAGCTAGTTTAAGAAATAGATGGCTTATAAGTATT
TTAGCCGGAAAGGACTTTTTTCTATAACAACGTTGGCTAAAATTGtacat
ttctaaaattttatgaGACTGAGTTTACAAATTAGATTAAGAGTATTTTT
GGAGGACTAAAattatgatgttcttataagTAAGTGTTTCATTTCCAATC
GACGACAAGGATGGAAAATAAAGTAGATGAATAAGTTGTTCAAGCAGAAG
GAAATTACTCCATTTTTATTCAACCAAGACTGGTGAATCGatcgaaaaag
tttttcacgaaatttgagcaattttatgttcattttgatttgatcgaGAC
TTCATTTTCTCTAATGAtgaatattttggaaaattcaagTTCTCATCTAT
TTTGAGCACAAGGTTTTTCTCAGGAGGAGGAGGAGCTCAAAGGCTAATGT
TTTAGTTTGTGtgaacaaattttatttgagttgtgattttcttttttgga
atttcttAAAGAGAATTTGTAATCATTTTTGTTCTTGTACAAAATGAGTT
GTGTTTGTTCCTTGTTTTGCCGCACCAATGTAAGTATTTAGCGTCCGAAA
GTAGAGTGTCTGTGAAAGAGGCCAAATGAAATTTCGATTATAGTGACTTT
TCGCCTTTGAGGTTGTTTCTATCTTCTTCATATCCACTAGCTTCATGTGA
CCGAGAgaaattgtttgattttttcaagTTGTTGTAAAAGTTGTTGTTTT
TACGTTGATATGGTTAAATAAAAGCTAAATAAAATGTCTCAAGAATGATC
TATTTTCCTTCCACAATCAAAGCTTAATCTATAACGGTTGTTGAAATTAA
GGGATCAAAATAATACGTGATTCTTAGGATTAATATTGTTGACCTGCAAA
CGAAGACTCCCTTTAAAAcgagttcttataaaacataCTTTAAATCAAGT
CAGTTATATTAAAACCCAAGGAAAGGTAAGTATGGCTCTTCCATTAGAAT
CTTTGTCTTTTGAAAAGCTTTCTCTGCAATTGGCTACACCAGATTCCTTC
ATTTCCATCGtaaaactcaaatcaaaagCCTCCTTGTAAGGATCGGGTTT
AAACTTTCGTTCATACATTTTGGAAACTTCAGTTCTCCATTCTATCCCCT
TTCAACAGTTTATATAGCAACATAAACATCAACTACTTTCCTTCTTCTTA
TCTTCAGAAAGTGTCGGTGACATCGAGCAGTAGCGAAGCTGAAGAAGAAT
ATTTCAACGAAACCGAcaacgaagatgaaaaacatGCCGGCAAtcccaaa
acaacaaaatacagcGAAAAACTAAAAGAAATGATCGCACCCATGTCAAC
TAAATTCAACCTACACAAAGAATATAAAAAACTTGAATACCTGTGTGCTT
TCTTTGCTTGCGCGTCACACCGTACGAACGTTATCTTACGTTCGCTAGGT
GCGTTATCATGGCTTGCTAGCGTCGTTATTCATTTTGCCTTCGACGTTAA
CGAGGCCATAAAAGTCTACGGCTACACCTTCTTAGCAGCGCAGTTCTTCT
GGTTGTTGAACTTCGTGGTTGGCACCCTAGCTATGCGTTATCGTGTGTTA
CCATGGTTACTCGAAGGAATGAAAGAATTAAGACACGATGAATGTTATGA
AAAAACAATCACAAATGTGCTCAGAATGGTTAAGGTATTACGGTTCTTTA
CCTAATTCGTTTGCGCGTTTTACCCTCTTAAAACTATAATCCTGTGAACC
TTGGAAATACATAGCCGAAATCATCCACTGTATTTTTGCCTGTGCTGTCT
GTCCATGCTCATACTCGAGATAATGAAAACTCaaatagttgtaataaaat
tgttgatgaaaatttgatatctgGAAGCAACCCAATATTTAGTTAAGGTC
GATGACCATGTACTTTTTCAATTCTTATTTTTAATAACGTTCGGCGTAAC
CTTTAGACATTTTAGGTGAAAGACATTcatgtattttgtttttcttagaa
aattccGTATTGGGTTCTCGCGTTCGGATTTGTCGGCTCTGGTGCCCAAC
ACCTTTTCTTATATATCGATGATGCGTTTAACGGTTCCTACAATTCATGG
ATGGAATCTAAAATCGTGGCCTCAATACTCTTGATCGTACGTTTCGTAAC
AGCCGCTCATATTTACAGCGCTTACCTGTTGTTTTGGATGGGTCCAACTG
CGGTAATGATGGCGTGTGGTTACGCTATGTCCGAGTTCTTAGGTAAGGTG
ACTTCCGTTCAAATCTGGATTAAGGGCTAGAATGGGCATCTAGTACTTTT
GATTAGAAGAGATTGTCAGTCGTTTCGGAAAAAAGATGGAACTGTAGAGC
AAAGGCAATCAGAACTTACCTATTCTACATAAAATTGGGAAACTTTTGAT
TTGTAATATGTCCagtactaccttaagggaacttattttggcgggaacta
attttgacgagcggTAAAAATCCTGGAAATTTTGCcgattgatgaatttt
tttaattttgccgggAACTAATTTcggcgaattttgtctaaatttgccga
attcgccaaaattagttcccgtcaaaataagttctcttAAGGTAGTAAGC
TCGTTGAGTCAGCTCCTGGACTACAATGGCTTCaattaccagtggatacc
ccttaaaacctacaacaaaaaaggtaccccctatatcctgataaagaaaa
cagtaagggctgaaactttttctggtgAGTCTAGGCTATCTATGAGCTTC
TTCCCCGGGTATGGTTTTTTGTAGAAGCTGCTAAGAAAATCTTTATTGCT
Ttgtgaaaaaatgcaattttagctatttaccccttaaaacctacaaaatg
gttttcttgaataactttttatagaatAGTCCTTTtagtctcaaattttg
aacactgCAAAGTAAGTAATGGTACATTTAGATCATTGGTaccttaaaat
ttttgaaacgttactaatgtttttctaaatctccatcaaatttgtgatat
tttggtatgcaatatgaCCAAGTTTGAGAAActcgattttcaaattttat
tggcCATTACcataaatgagctttaaaatagaattttgaGGGCCTTACAA
TTTCTTTGGGGTGCAACCAtggagaagaaaatgattttttcgtatctacc
ataagtataggtacctaaaagtataggttttatgaccttaaattgatttg
tgtaatctctaggtccgaaaaacttgattttttgaagggatttttgataa
agttttcaataacttcgaattttacgACATTTTGCGATAATTAGAATTAT
TGAAATGAGATATTTTATGAAAGTACCTATATTAgagattgtaaaaaagt
gaattatacaatattaGATTAAGTTTGGTGATTAAGAGAGCCTAAAACcc
aactttgtaggttttaaggggtatgtggttttaaggggtatccactggta
tatGATCAATTCAGAAATTCGAAAGAAAAAACTAGGAAAAAGTCAGTAAT
TTCCTGTAAAAAACATTTGGTACAACCTTACTACTGTTTATCTCTATTAA
GTAATCAATTAACCAACTTCGTTGCCGTGTATccaaggctttatttacgt
tactgatacGCATCAgtgaataccctggtgttggctggtGCCAGTCTCCC
CTCTCAAAGAAGGTAGACTATTCACAAAACAATTCTCGGATATTATCTGG
TTCTGTTTGTAAGCGTCAAAAAGCCGATTATAAACAGGAAACGATGTTGG
ATATCAACGACAAATCTTTCAATCAATTCCATTATAGATCAATTCGATGC
AAAGATTCGAGACACAAACCGAATAACATCATTCAAAGAAGCCATCTCGT
TGTATTCAAAACGCGCCAAATTCGTCAAAACCTCTTCCTCCAAGTGTTTA
GTATGTGTCATTTCATTATTAATTATTTTCGAACAGATTTAGGGGAAATG
AAAGATTTGATCTTGTGTCCTTTGGAAGATAATTTAGTAGGAATTTAGTT
TAGGGGATGGCTAATTTTTCATAGGGGGTTTAACTTGAAAGAAGGctgga
aaattttattttggagAGGATTGATATGGCAGCTGCTTGACCTTTTTTTG
GACATTCGAAGTAGATCAGGTAATGAAATTAGGTAATAGAGGGGGAATAC
TGTCTATCGTAAACAACTTGCTTTTTGATGTTATAGCTGAAAAAAGTGTT
CTTTACATAGTTTGTAGGTTTAAcaagatttccaaaatttagACTACCAG
TAGGGTTAAAACCACGGATCATTATTGATAAGCTAGTGAAATTATACTGA
AATTTAGCCTTAAGTTTTAAGTTCAAGtcttaagtttttcttttctttct
acaACAGGTTATCTTATCCATGCAATTACTATCTGTCGTCATTTGTTTTG
GTTTAAACACATACGTCTTCTTATTCTCGCCTGTTAGAAGATATTTGCAT
GTTTGGCACTCCATTGTCCCACTACTCATCATGGTTTACCCACTATGCAC
TGCGGCATGGGTTACTAAACAGTACACTTGGTAAGTTGTTGATTTTGTTT
CTTATTTATATAAAACTTTAAACTGTGTAGAAGATTTTAAATTTAGGTTT
AAGTTCAAAAAGCTGTAAATCTAAGGAATAAGAAAAAAGCTAAAGGAACT
AGTTTGTTACTTATCACATAAGGATGAATGTTCTTGGGTTCTTCCTGAAA
ACAACCTTTGTCTGAAGGAATTGACTACAGTATAACGATTTTTCTTCCTT
TCGTTCCAGGTTTATTATAGTTGTTGTACGAGCTTGGGTGCATCGTGACG
ATTTAGATTCATCATCCAGTGATGAAGATTCAGGAATTGATGAAATGAAA
ACGAGTCAAGATAAAAAGACATTCGCAGGGAAAAGTCCTTTCTTCTCTAA
AAAGAAACTAGACGAGTCTATTAGTTCTTCAGTTGCTGGCATCTTCAAAA
GCGGCCGCCCAAAGTCTGCGCATTTCGATTCGCAACGGAAACTGTCTGGA
TTCAGGCGATCATCAAGTGTACAAATTAAGGACCGTAATAAAAGGAAATC
AACGCAAAATCTCATGCCTTGGCAGAAAGCAGTAGCTGAGAAACAACTTT
CTGATCCGGGAAATATCGTTGGCTCGACTACCTCAATAAACAGTGTGCCT
CGATTTGCTTCAACCGTTGCTGCGGCAACTGCTATAAACAAATTTAAGAA
TGTAAAAAACAGACCGAGATTCAATTTCGAgaaatttttatcttatttag
agAGCATGCGTAGTGTGGTTGGGTTCTCCATCTCAGGGATTATGGTCACG
TGGGACTTGGTCTCCACCACactgtttttattgttttccaTCATAGCTGT
TTTCATGCAGGAATCAATCTTTGGCGATCAAAAAAGTACGTTGACTTCTT
GATCTGACTACAACATAAGACCCTGTCCACACGTTGCATGGTGTGAATCC
TTTTGAAGACAATGGAATCATTCAAATTGGCGTGTTTGGGATTGAtttta
tttatcttatttttatttataaaaccgATATCGTGTGCTAAATGTAAATC
CAGCCCAATTTTTTGGAACAGCGCGATTAAGAGTTATTAATTGCATCCAA
ACACTACCTCTTTGAGCTTTGGCCCACTGGGCCTTTTTCCTTAATCTAGT
GCTGTAAAATAAGTCGACATTTCAAAATTGGACTAAGTATTGATCCTGTT
TTTGTGGAATTTGCTACTGTGTGCTACTACCattggataccccttaaaat
cacataccccttaaaacctacaaagttgcACTTTGGGCTCTCTTAGccac
caaacttaatttaataGTATAATTCACTTTTCTACTACCTGTTATAAATT
TgctttcataaaatacctaatttcgAGAATTCAATTATCGCGAAGTATcg
taaaattcgaagttatttgaaaattcaagtttTTCGAACCTAGAGATTGC
ACAATTGAGTTTATAGTCATAAAACCGATACTTTTTAGGTACCTATttat
ggtaggtatgaaaaaaatcattttcttcttcatgatTAGACTCAACCGAA
ATCGTAAGGCCCTGAAAGTTCTATTTCAAGGCTCATTATAGTAGTGGCCA
ATAAAATCTggaaatcgactttctcaaaacctggtcattctgtataccaa
aatgtcacaaattcgatggagatttagaaaaacattagtaccatacgtca
aaaatgaagttaataaaagttttgaccctTCAAGGtcgttttttgaagaa
aaaaacaagtgCAATTGTATTATGGgtatgaaatcctgaaaaatacaaat
acacgttttttttttataagaacaaactatataagaacataaggcttcga
gcccaaaaatttaagaacattctaagaacatactaaggctttggagactt
aaaaacatgcaatttcttaagaaattacatcaaaatgctcaaaaaatgct
gaaaataagaaaattttaagaacatttttaggcttcaaattcaaaaaact
aagaacatccgaaggcttcgaaaattttcgatgttcttataaaaaaaaac
gtgtattgtttTTGGAATGGATTTCcagcaagtatttgatcaattgaatc
acggTTTAGCACCTGGATTGCAATTTCACAGTCTCAGTATGTTGTGAGTA
AGGGGTcaatgtttgtaggttttaagatGTAATAGTGAAGATTTTAAggc
atattttgattttaacgtacagttttgaaaGTATTTAGGTACCAATGATC
CAATTGTAACGGtagtaactttgcagtgaatcactgtataaaattttaga
ccaaacggactattttataaaaagttattcgagaaaaaccattttgtcaa
aaggacattttttcatgaaaaactgaaaactggttTCTACGAAACATCAC
TACTAGGGAAGAAAACCATTGACagcgtactttcaacacaaaaagtttca
gcctcaaatTCCACCTAAATTTTCAGATAGAGGGTACCTCTATTACTTGT
AGGTTTAAGGGGTACCCACTGGTATAGTTTCGAGAGATAAATACAAAGTC
TAAACTTATCTAGCATATTTATATGGCAGGGCATAACCCTATGAATGTGA
AAAAACATGGGTCAATAAACTTAAAATAAATTGTagatatttttttagaa
ataattatttaacataatttaaagtttgatatgaaagaattttttcatCC
CTATCCTCGAAACAAAACTTCTACTCGTAAGTTCAATGTCGCAAGTTTTG
TTCTGTTTGACgaagaattttattatttttgttaacTGGATATTGTCAAG
AGCCAGATCAAAGCTTTACAAGTGTTTGCGGCTTCTTAGtgaaaaataac
ttttctgCTGCTTCATATAATAAGCTCTCCTCCATTCCGTCATACAGTCA
GTCTAATTGACATCAATGTTCCTTGTTTACATACAATGACGTATGACTAA
AAAAACACATTGACCTTCTTAGCTTCAACAAAACTTAACCACGAGTTGCC
GATTTCATTTAGGTTTCATGATTACCAAAAATTACACCGTGGAACACAGA
ACCACAATTCATGATATCCACGAGGTAATGTTTTTAAGGAAACACCTCGG
TTTTTTCCAGTAGTGGCAAACTTTGAACGGAAAAGAACGGGGAGTTTCcg
tagaagaaaaaaatattgcgtCATGAATATCACAAATACAACTTGCTTCT
CTAATGAATGGAATGATGATGCCAATACATAAATTCGCTGGTTGGTGAAC
TCACATGTCAATGCAACATAATAATGTAGACAGGCTAGCCACAAGTTCAG
CATCCAATGTCCATTCTATGGTTTTATTCGGTTCAACAAATGAATCACCA
TCAAACTTGGTAAAGGTCTAACTtattctttgatgtaccattgtctcatt
ttaatgattttaaatCCAAAAGCTGTGAAGACTTCTTCTTCCGTAGATCT
TGAATACCTTCCAATTGGAGATTCCTTCTCGTTCAACCAGAGCCCTCTTC
CATCCAGATATCACTTTCCATTCAACTTGGTAAAGGTTCCATGCTTGTTT
TGATATCATGATCTCTCTGTAAAACTTCATTATTGTTCAATAGCCTTTTC
CTCCTTTTGTAAAACTTATACACGATATAAACTCCAACACCAAGAATGAA
CAAGATGACAATTCCAACGATTACAAAAGCGATCTTGGTTTCACTTCGCG
TTGCATCTCCTGTTAATGATGGATCTTCAGATTCTGATGAGCTACTCATT
TTCTTTCAATACTTGATGATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042848XLOC_042848Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068688-exon-scaffold_487-1491911889:29502..29899TCONS_00068688-exon-scaffold_487-1491911889:29502..29899Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1510915933:29502..29899TCONS_00068688-exon-scaffold_487-1510915933:29502..29899Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1575043694:29502..29899TCONS_00068688-exon-scaffold_487-1575043694:29502..29899Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1491911889:33559..34035TCONS_00068688-exon-scaffold_487-1491911889:33559..34035Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1510915933:33559..34035TCONS_00068688-exon-scaffold_487-1510915933:33559..34035Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1575043694:33559..34035TCONS_00068688-exon-scaffold_487-1575043694:33559..34035Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1491911889:34350..34593TCONS_00068688-exon-scaffold_487-1491911889:34350..34593Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1510915933:34350..34593TCONS_00068688-exon-scaffold_487-1510915933:34350..34593Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1575043694:34350..34593TCONS_00068688-exon-scaffold_487-1575043694:34350..34593Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1491911889:36139..36251TCONS_00068688-exon-scaffold_487-1491911889:36139..36251Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1510915933:36139..36251TCONS_00068688-exon-scaffold_487-1510915933:36139..36251Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1575043694:36139..36251TCONS_00068688-exon-scaffold_487-1575043694:36139..36251Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1491911889:36709..36881TCONS_00068688-exon-scaffold_487-1491911889:36709..36881Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1510915933:36709..36881TCONS_00068688-exon-scaffold_487-1510915933:36709..36881Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1575043694:36709..36881TCONS_00068688-exon-scaffold_487-1575043694:36709..36881Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1491911889:37111..40623TCONS_00068688-exon-scaffold_487-1491911889:37111..40623Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1510915933:37111..40623TCONS_00068688-exon-scaffold_487-1510915933:37111..40623Clytia hemisphaericaexon
TCONS_00068688-exon-scaffold_487-1575043694:37111..40623TCONS_00068688-exon-scaffold_487-1575043694:37111..40623Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_487supercontigscaffold_487:29502..40623 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0572774	0	0.141375	0.736924	0.422133	2.1897	2.08708	0.974427	1.10149	0.941044	1.50948	0	0	0	0	0.523558	0.680869	0	0	0.896552	0.378309	0.094888	0.300175	0.14347	0.542008	0.850153	0.583988	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068688 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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