TCONS_00068790 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068790
Unique NameTCONS_00068790
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1939

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068790 ID=TCONS_00068790|Name=TCONS_00068790|organism=Clytia hemisphaerica|type=transcript|length=1939bp
TCTTCATTTCGgctatttttgattttatttgccATAATACTAGCAGTTTC
ATATCTGATAGACTTATTTTTTTCAACCAGAAACTATACGGACGACTCGG
TTTTATCTGGTCTACATGTAATGAATGCAAGGATAATGTTGTAGactcaa
agaaaaagaaaaatgaaccaTTTTACAAGattgttGGCGTTTCTGTCCGT
CTTTGACGTAACGAAAGCTCAGAGTACTTGTGAAAAAGCCCAGTGTAAAA
AGCAGCTCTTCGATTTCCAGGCTATTCATGGTTCCTTGGTAAAAGTGTCA
GACAAGAAATTTGCTTTATGGACGGCCAGTAAAACACTCTCCCTCACAGG
GAGTCAAGAAGAAAGAGAACGTTCTTGTTCGGAAGATTGTGTAAAAGAAG
GAAAAGACGTGTGTAGGAGTGCTCATTTGGAATCGTTTCAATCAGAAGAT
ACACCCTCCACCTGTGAGTTGTTCGTGGAAAATGTTTATGATCATTTGCC
AAGTGTGTTGAGCACAATTCGAACTGATAGCACTGGTTGGACTTCTTTTC
ATGTCTTGaattcatTTTGTGAAGATGCACCATGtcaaaatattggaaaa
tgtGTTCCCGATTTTGCGACCAATGAAGGTGTTTGCGAATGTACCGGTTA
TTCGGGAAAATTCTGTCAAGATCTTAACCCCTTAGAAGAGGACGGCTCGG
TTTATTTCACATTCGATGATGGACAAATGAAGAATTTGGGAAGAAGTGGC
GATGTTTTAACTGAAGGAACTGGTGATGGTCTTGTTATGTATGATATAGC
ACGAAACACAAGAGTCTTGCAATGCAATCTCACAAACTGTTTCGATTTTG
GAGATGACACAAGTACTACATGCATGAAAAAGTACACAATGCCATATTGT
GCTGGTGGGATGACACTGGCTTTCTGGGTTCGCCTTTTGCGTGGGGATGA
AAACAGAGACGGTTTCATGCTGCTTATTGATCAAGGAGCTGGTGATGATA
ATGCTGGTATAGCCATTAATGTCAAGCCTGACAAAACAGAAATAAACATC
TACATCAAGCTCCTTAACAACCGATTGAAATGTCAATTTACGAATATTCC
CAACGATATTTATCGCCAATGGTTTTTCTTGAGCATGTCTTTCCAAAGAA
CGCCTTCAACAAAAATGGTTTGCTTCATGAATGAGGATCGTGTGGAGGTG
ACAACATACAGCGCAACTACTTCTAATCCACCCACGTCCAAATTCTTCCC
TGGCGATGAAGGCAAATTCATGTTGGATGATATCCTCTATATTCCCAAGT
TTTCGACTGATGAAATGATTTCAACTTTCTATGATAAAAccaaatcaaat
tAAGCTAACCGGGTTTGACAGAATGGAGGTAAAGATTAATACCTATTCAA
ACTGTTTTATGCGAAAAAAATGTTGCGTGCTGGTAAGCGCAGTTGTAATT
AATTGAGTTACTGTGTGTGTCTTATCGCAGCATTGATAACAAACTGAGTT
GTCAGTTACGGGGTACGAAATGGCGTCCGTGGAAAAAGCAACTTTGTTAC
CAAGTTATAATTTATTTAAGTAGTATTTCAAATGCACATTATTTAAGTTT
TTAAAGCATCCAGCAagtgattttattactttttcataTAGTTTTCGGAA
GCTCATATTGGGATTTTCCCGAGAACACTCTTATTTAGAAACGAAACCTT
TAAAGAGAACACCAAATAATTCAAAACGAAATGttgtccacatagtacgt
acgcactaaaatgtcaaaaatcgaGTACCCAAACCCCCTTTGTACACAAG
CGTACGCATATGCCTAGACCCCCTAGTTAGTACATACTTTTTCCATCCCC
GCCCCCTTAACTAAAAGATTAAGGTGCAAATCGTCTGGTAAAATATGAGT
GTTTCATTAAgcattactcttaggtgccaaataaacgcc
Run BLAST on NCBI

protein sequence of TCONS_00068790-protein

>TCONS_00068790-protein ID=TCONS_00068790-protein|Name=TCONS_00068790-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MNHFTRLLAFLSVFDVTKAQSTCEKAQCKKQLFDFQAIHGSLVKVSDKKF
ALWTASKTLSLTGSQEERERSCSEDCVKEGKDVCRSAHLESFQSEDTPST
CELFVENVYDHLPSVLSTIRTDSTGWTSFHVLNSFCEDAPCQNIGKCVPD
FATNEGVCECTGYSGKFCQDLNPLEEDGSVYFTFDDGQMKNLGRSGDVLT
EGTGDGLVMYDIARNTRVLQCNLTNCFDFGDDTSTTCMKKYTMPYCAGGM
TLAFWVRLLRGDENRDGFMLLIDQGAGDDNAGIAINVKPDKTEINIYIKL
LNNRLKCQFTNIPNDIYRQWFFLSMSFQRTPSTKMVCFMNEDRVEVTTYS
ATTSNPPTSKFFPGDEGKFMLDDILYIPKFSTDEMISTFYDKTKSN
Run BLAST on NCBI

transcript from alignment at scaffold_49:454255..460869+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068790 ID=TCONS_00068790|Name=TCONS_00068790|organism=Clytia hemisphaerica|type=transcript|length=6615bp|location=Sequence derived from alignment at scaffold_49:454255..460869+ (Clytia hemisphaerica)
TCTTCATTTCGgctatttttgattttatttgccATAATACTAGCAGTTTC
ATATCTGATAGACTTATTTTTTTCAACCAGAAACTATACGGACGACTCGG
TTTTATCTGGTAACAGTATGGaaataattatattaaattgtcgctgtttt
tctttaaattttacttttggaatggcaaaatttcaaagaaaattatatta
aatagTTATAATTAACAGTTATTAAGAGAATTAATTTTTGCAGGAACTAA
CTTTCGccgaactaattttcgcggaactGATTTTCGCGTTTTTATGTGTC
TACCACGAAAATTGGTTCCACGAAACACGATTTTTACTTACAATGTGTAA
AAACCcttatgaaaatgaaataatttcgGCAAAAAAGGGTAGCcgccgcg
aaaattagttccacaaaaattagttaccgcgaaaaaaaaatctataagaG
AACTTGaccttgttgttgttttttttagttCAGGTCTACATGTAATGAAT
GCAAGGATAATGTTGTAGactcaaagaaaaagaaaaatgaaccaTTTTAC
AAGGTGAGTCCTGATGATATTAATATACAtattatcggagtttttgattt
ttctaaaaaagcgatgcattgtgggattgtttcgggagtataacaataga
aatctcataggaattcctcgagggaattctattgtaatacccccgaaaca
atcccacaaggcatcgctttttttagaaaaatcaaaaactccgataagat
ctatttcaATAAGATTAATTTTCACAGGATTAAAAACAGTACTTGAATTT
CCTTTAGAAAGTTTAATCATAGAAAACCAAAGTgctttaaagatattcaa
aaaaatttggaggGTTAATACTCGGCAAAATCCAAAAAGCCAATTGAGTT
AAACTAAAAAGGTTAAAATTTCTGGatcaatttttcagattttttgcaga
agCGTGCGCTTGTTGGCCAAGGCCTTTTTTAACCATAGCGGGATGAGAGG
GTAGGCAGGGCGAcccagtacacgttttttttttgcgaaactAGTTTTAc
aaagcagcctcaatgtttcttaaggagtcggccttttgagccttaaatgt
ttcttacatgtttctaaactgtttgacataatcagcctcatggaaggctg
cattagaaggttcttaaaagaaacctaattaaaaaatgttattttctcat
tctcagcatcagcatgtttcttagacgtctcttagtttttaggcattctg
agcctcctcatgtttcttaaaagtgtgtttcttaaaaaaaaaaaacgtgt
acgctaTCAGTTGAAATTTTTCGATTGATTCTTTTTCAGGTTTTGAAGCA
TCCTTACggtatttcaatgtttttcttttttagattgttGGCGTTTCTGT
CCGTCTTTGACGTAACGAAAGCTCAGAGTACTTGTGAAAAAGCCCAGTGT
AAAAAGCAGCTCTTCGATTTCCAGGCTATTCATGGTTCCTTGGTAAAAGT
GTCAGACAAGAAATTTGCTTTATGGACGGCCAGTAAAACACTCTCCCTCA
CAGGGAGTCAAGAAGAAAGAGAACGTTCTTGTTCGGAAGATTGTGTAAAA
GAAGGAAAAGACGTGTGTAGGAGTGCTCATTTGGAATCGTTTCAATCAGA
AGATACACCCTCCACCTGTGAGTTGTTCGTGGAAAATGTTTATGATCATT
TGCCAAGTGTGTTGAGCACAATTCGAACTGATAGCACTGGTTGGACTTCT
TTTCATGTCTTGGTAAGAATTCAACAGTAGTTTAAAGGgatatatattat
ttttcttttgtaatcTAACATTTATAAaagcaggctcagtttttggtacc
taaacaatggctctattgtttgagaacaatagaatgctaagcataatgcg
agcctgatataacGATAGACACTTGCTTAAAAGAACATGTAATCAGATTG
TGGGATATTCCAAGAAATGGTCAACCACGATATGTTTGATTTAACCACCA
TCTATGGGTACATGGTGCATGGGTCGTAGCGCTATCCAGTCAAAATGAAT
TTGGCGATTTGGCGTAACGTGCCCCTCTCCATGGAATGGTCGTTGTTTTA
GATATTTGGCATAtcaaatgggccattccattttatatccaaacaggagg
gtggacgaacatttccaggggtaaTCAGAAAAAATGCCCAGGGGgtataa
aaaagtattttttcatgtttccagggggtataaggttattccaaaatttc
cagggggcaaaagactgattttagttcattCACTCTCACTTTTAagatat
aaaaataatttttccaatggttcttttgcaaattttgaaatttttcaggg
GGTGTTCACATTTCTATAAATCTTTATTTGCCTTGAATAGGTTtgtcccc
cccccctgtttagaAATTgtatggaacagcccaatccGTCTATATATCGT
GAGGAAAAGCTCATACCATCTGATTATTATCCCTTTAACTTAGCTTTGAA
TTGAATATGAAAATTAGTATTTGAGGATATTAAGCAAACTAGTCTAATCA
ATCATGTCAGAGGGTGGGAACATAAAGGcagcgggcgtttgctagaatag
gaacTGCGTAGGAGAATGAACAacagttggtgagaggctgctgattaaca
aGGGCTTTCAGCCCTTCccttcttcctacgcttactacgttcacttttcc
cgcgtgataccgttccagcctgACTGGCGTGTCAGTCTACGGAACtggtt
gattttctttgttctCGTGCGGGACTTATGAAATAGCgcagttttttttc
ataacgtcagcctgggtttaggtcccaggtaAAAATTAGGTTCCCCCTGA
GTTTcaagtccccccaaagatttatgaattttttgttagcccccaggact
tttgaccctagacactttcaaaaaactgatcCAGTAAAAAGgggttttcc
aatgtaaattgcgttcagttctaagtctaagataaaatattttgcacact
ttctataaaaaaattgtgccgcattcaaaaaaatttcagattcacgagct
tcaatttgagtaattgaagccaactattaagaTTCAAAGCAGTTAAAAAA
GGTTATACCTCAATTTTACCCAAGAAAATATAAGGGAGGGTCAAACGATT
AAgttcaaagcacaaaatatttttctcttaaaGTCTCTCGAGTTCGCAAA
GCATTtagaatgacagattgaatctagtgctttctttgttttcactcGGC
ATATTTTCAGATGagatgaagtttttataagatactttaataattggtca
tttgaagtaagaAAAATGACGcgctctttagaaaaagtaacaaaattgtt
ttattactggttaacaaccaatcaaatcaaataagagttTATAAAGTCCA
TCTCGTCCCcatatttttcaagatttcactTTTAATCTGACGTTTGCTTG
AAAACCACGCGCTTCATGCGCAATAAGTCAAACACCTTCCACtagaataa
tcttttttttaagaattcatTTTGTGAAGATGCACCATGtcaaaatattg
gaaaatgtGTTCCCGATTTTGCGACCAATGAAGGTGTTTGCGAATGTACC
GGTTATTCGGGAAAATTCTGTCAAGATCTTAGTaagtaacccagctggca
cacaacgttgttttataacgttcatataacgttatatggacgttatgaac
tttggatgaatgttgaaacaatgttttgtGCCAGCTTTGGGAACCTATTT
GCCAAGCCTCGGTTTGTTCATCAGTAGCATGTCACTGTCTATGGTGCTGT
ATGTCCGTCTTTGAAGGAACAGCGCTTTTTTAATGACCACACGACAAAGA
CCCTGAAATCTATCCAATATTGAAAAATACATACTTACTTCAGTTGAGAT
CAAAACAGCTTTTTCCAGTTACTGAATATTGCATTTTTATCGTTTACCAG
ACCCCTTAGAAGAGGACGGCTCGGTTTATTTCACATTCGATGATGGACAA
ATGAAGAATTTGGGAAGAAGTGGCGATGTTTTAACTGAAGGAACTGGTGA
TGGTCTTGTTATGTATGATATAGCACGAAACACAAGAGTCTTGCAATGCA
ATCTCACAAACTGTTTCGATTTTGGAGATGACACAAGTACTACATGCATG
AAGTGAGTTTTTGTTATAAACAATAGGGTATTAGGGTATTGAGCGCTCTC
AACCAACTACAGGATGTCCGTAAAAAAAGTATCGAATCGAAACACAGCTA
TAAGTAAAACGTTTTTCAACTGCCTGAAGAGGGCGGTTTTAACAGTGTAG
ATGTATAAGTAAAATCtcgtttttaaattgaaataaatttttgactCACT
TATCTCTATGATATAAACACATTACTTTCCTTACATCTTATCTGGGTATG
AGagcttttaatatttttgtaacgtCCCTTCCTCAATATTTATCAGTCAA
GAACACgatcaaattagcctatcatagagTAATTAGACTACTATTTTAAA
TAGTATGATTTGccgaaaatcaacaaaaatgtcGATTGCTGAAtatcaaa
gtcagaaaatcggGCATAAAAATGCAAAATGGCGGCAGTAAGGAAGATGG
GTTTGACCAgggaaaatggaaaatttgaaattaacaaaaaaatagaaact
gataataaaaatttaattacctTTTTGCCCTGAAGATTTTCCACCTCGAC
TTCTTTTAAACTGGTGTACTTGaagctttatttttctaaaacaaagACTG
GTTTCGGAATGAATTTTTCACCGTAAAAAGCCTTCAGTTAATCCAAAATT
TAAGCTGAAGAAGTTTATTGTTTTTTCGTAAGTCGAGTTTACTTACTTTA
ACCCAATTGATCATGCATCGGGAATCTTGTGCAAGGGGATTGGGTACCAT
CACTCTGTAGAGACTCCTCTTTGTTATATTACATTATCGTGGTTTGGGAA
ATCTGTTGATTGCCtacttttaaacattgaatatctgttttgaaatattg
aaatgaaTTATAAAAAGCTAGGTGAATTGTCACCATATTAAAATAAATCA
TAACACACTTTTCTTAGTTTGTGAGATTGCATTGCAAGACTCTTGTGTTT
CGTGCTATATCATATATAGCAAGACCATCGCCAGTTCCTTCAGTCAAAAC
ATCGCCACTTCTTCCCAAATTTTTTGCATTACAGTAATTATTGTATTAAA
ATTCTATGTATTTTAGAAAGTACACAATGCCATATTGTGCTGGTGGGATG
ACACTGGCTTTCTGGGTTCGCCTTTTGCGTGGGGATGAAAACAGAGACGG
TTTCATGCTGCTTATTGATCAAGGAGCTGGTGATGATAATGCTGGTATAG
CCATTAATGTCAAGCCTGACAAAACAGAAATAAACATCTACATCAAGCTC
CTTAACAACCGATTGAAATGTCAATTTACGAATATTCCCAACGATATTTA
TCGCCAATGGTTTTTCTTGAGCATGTCTTTCCAAAGAACGCCTTCAACAA
AAATGGTTTGCTTCATGAATGAGGATCGTGTGGAGGTGACAACATACAGC
GCAACTACTTCTAATCCACCCACGTCCAAATTCTTCCCTGGCGATGAAGG
CAAATTCATGTTGGATGATATCCTCTATATTCCCAAGTTTTCGACTGATG
AAATGATTTCAACTTTCTATGATAAAAGTAAGTTTTTATCCGTCCTTTTG
AACAAGACCTAATTAGCGGTGGATTAAATTTAGggctgatgaaaaaaaaa
atcttcacatCATCCTCTTACAAGCTAATACTACATTTACGGCTACCATA
TTAAGACACAATCCAATATTTTCTAGATCGAACTATCAAGATACTATTTT
TTCAGAGGTAGATCTGATTCAAATTTTATGCATAAATGGTAGAAAGCACA
TTCAagtcttcattttattttgttcGATGATTTGTACTGAGACTTTTTAA
TATGGAACCGTCGTAGTTTGTTTCCgttcacacttttttataattttttt
taatcttcatttcagccaaatcaaattAAGCTAACCGGGTTTGACAGAAT
GGAGGTAAAGATTAATACCTATTCAAACTGTTTTATGCGAAAAAAATGTT
GCGTGCTGGTAAGCGCAGTTGTAATTAATTGAGTTACTGTGTGTGTCTTA
TCGCAGCATTGATAACAAACTGAGTTGTCAGTTACGGGGTACGAAATGGC
GTCCGTGGAAAAAGCAACTTTGTTACCAAGTTATAATTTATTTAAGTAGT
ATTTCAAATGCACATTATTTAAGTTTTTAAAGCATCCAGCAagtgatttt
attactttttcataTAGTTTTCGGAAGCTCATATTGGGATTTTCCCGAGA
ACACTCTTATTTAGAAACGAAACCTTTAAAGAGAACACCAAATAATTCAA
AACGAAATGttgtccacatagtacgtacgcactaaaatgtcaaaaatcga
GTACCCAAACCCCCTTTGTACACAAGCGTACGCATATGCCTAGACCCCCT
AGTTAGTACATACTTTTTCCATCCCCGCCCCCTTAACTAAAAGATTAAGG
TGCAAATCGTCTGGTAAAATATGAGTGTTTCATTAAgcattactcttagg
tgccaaataaacgcc

Coding sequence (CDS) from alignment at scaffold_49:454255..460869+

>TCONS_00068790 ID=TCONS_00068790|Name=TCONS_00068790|organism=Clytia hemisphaerica|type=CDS|length=7146bp|location=Sequence derived from alignment at scaffold_49:454255..460869+ (Clytia hemisphaerica)
atgaaccaTTTTACAAGattgttGGCGTTTCTGTCCGTCTTTGACGTAAC
GAAAGCTCAGAGTACTTGTGAAAAAGCCCAGTGTAAAAAGCAGCTCTTCG
ATTTCCAGGCTATTCATGGTTCCTTGGTAAAAGTGTCAGACAAGAAATTT
GCTTTATGGACGGCCAGTAAAACACTCTCCCTCACAGGGAGTCAAGAAGA
AAGAGAACGTTCTTGTTCGGAAGATTGTGTAAAAGAAGGAAAAGACGTGT
GTAGGAGTGCTCATTTGGAATCGTTTCAATCAGAAGATACACCCTCCACC
TGTGAGTTGTTCGTGGAAAATGTTTATGATCATTTGCCAAGTGTGTTGAG
CACAATTCGAACTGATAGCACTGGTTGGACTTCTTTTCATGTCTTGaatt
catTTTGTGAAGATGCACCATGtcaaaatattggaaaatgtGTTCCCGAT
TTTGCGACCAATGAAGGTGTTTGCGAATGTACCGGTTATTCGGGAAAATT
CTGTCAAGATCTTAACCCCTTAGAAGAGGACGGCTCGGTTTATTTCACAT
TCGATGATGGACAAATGAAGAATTTGGGAAGAAGTGGCGATGTTTTAACT
GAAGGAACTGGTGATGGTCTTGTTATGTATGATATAGCACGAAACACAAG
AGTCTTGCAATGCAATCTCACAAACTGTTTCGATTTTGGAGATGACACAA
GTACTACATGCATGAAAAAGTACACAATGCCATATTGTGCTGGTGGGATG
ACACTGGCTTTCTGGGTTCGCCTTTTGCGTGGGGATGAAAACAGAGACGG
TTTCATGCTGCTTATTGATCAAGGAGCTGGTGATGATAATGCTGGTATAG
CCATTAATGTCAAGCCTGACAAAACAGAAATAAACATCTACATCAAGCTC
CTTAACAACCGATTGAAATGTCAATTTACGAATATTCCCAACGATATTTA
TCGCCAATGGTTTTTCTTGAGCATGTCTTTCCAAAGAACGCCTTCAACAA
AAATGGTTTGCTTCATGAATGAGGATCGTGTGGAGGTGACAACATACAGC
GCAACTACTTCTAATCCACCCACGTCCAAATTCTTCCCTGGCGATGAAGG
CAAATTCATGTTGGATGATATCCTCTATATTCCCAAGTTTTCGACTGATG
AAATGATTTCAACTTTCTATGATAAAAccaaatcaaattAAatgaaccaT
TTTACAAGattgttGGCGTTTCTGTCCGTCTTTGACGTAACGAAAGCTCA
GAGTACTTGTGAAAAAGCCCAGTGTAAAAAGCAGCTCTTCGATTTCCAGG
CTATTCATGGTTCCTTGGTAAAAGTGTCAGACAAGAAATTTGCTTTATGG
ACGGCCAGTAAAACACTCTCCCTCACAGGGAGTCAAGAAGAAAGAGAACG
TTCTTGTTCGGAAGATTGTGTAAAAGAAGGAAAAGACGTGTGTAGGAGTG
CTCATTTGGAATCGTTTCAATCAGAAGATACACCCTCCACCTGTGAGTTG
TTCGTGGAAAATGTTTATGATCATTTGCCAAGTGTGTTGAGCACAATTCG
AACTGATAGCACTGGTTGGACTTCTTTTCATGTCTTGaattcatTTTGTG
AAGATGCACCATGtcaaaatattggaaaatgtGTTCCCGATTTTGCGACC
AATGAAGGTGTTTGCGAATGTACCGGTTATTCGGGAAAATTCTGTCAAGA
TCTTAACCCCTTAGAAGAGGACGGCTCGGTTTATTTCACATTCGATGATG
GACAAATGAAGAATTTGGGAAGAAGTGGCGATGTTTTAACTGAAGGAACT
GGTGATGGTCTTGTTATGTATGATATAGCACGAAACACAAGAGTCTTGCA
ATGCAATCTCACAAACTGTTTCGATTTTGGAGATGACACAAGTACTACAT
GCATGAAAAAGTACACAATGCCATATTGTGCTGGTGGGATGACACTGGCT
TTCTGGGTTCGCCTTTTGCGTGGGGATGAAAACAGAGACGGTTTCATGCT
GCTTATTGATCAAGGAGCTGGTGATGATAATGCTGGTATAGCCATTAATG
TCAAGCCTGACAAAACAGAAATAAACATCTACATCAAGCTCCTTAACAAC
CGATTGAAATGTCAATTTACGAATATTCCCAACGATATTTATCGCCAATG
GTTTTTCTTGAGCATGTCTTTCCAAAGAACGCCTTCAACAAAAATGGTTT
GCTTCATGAATGAGGATCGTGTGGAGGTGACAACATACAGCGCAACTACT
TCTAATCCACCCACGTCCAAATTCTTCCCTGGCGATGAAGGCAAATTCAT
GTTGGATGATATCCTCTATATTCCCAAGTTTTCGACTGATGAAATGATTT
CAACTTTCTATGATAAAAccaaatcaaattAAatgaaccaTTTTACAAGa
ttgttGGCGTTTCTGTCCGTCTTTGACGTAACGAAAGCTCAGAGTACTTG
TGAAAAAGCCCAGTGTAAAAAGCAGCTCTTCGATTTCCAGGCTATTCATG
GTTCCTTGGTAAAAGTGTCAGACAAGAAATTTGCTTTATGGACGGCCAGT
AAAACACTCTCCCTCACAGGGAGTCAAGAAGAAAGAGAACGTTCTTGTTC
GGAAGATTGTGTAAAAGAAGGAAAAGACGTGTGTAGGAGTGCTCATTTGG
AATCGTTTCAATCAGAAGATACACCCTCCACCTGTGAGTTGTTCGTGGAA
AATGTTTATGATCATTTGCCAAGTGTGTTGAGCACAATTCGAACTGATAG
CACTGGTTGGACTTCTTTTCATGTCTTGaattcatTTTGTGAAGATGCAC
CATGtcaaaatattggaaaatgtGTTCCCGATTTTGCGACCAATGAAGGT
GTTTGCGAATGTACCGGTTATTCGGGAAAATTCTGTCAAGATCTTAACCC
CTTAGAAGAGGACGGCTCGGTTTATTTCACATTCGATGATGGACAAATGA
AGAATTTGGGAAGAAGTGGCGATGTTTTAACTGAAGGAACTGGTGATGGT
CTTGTTATGTATGATATAGCACGAAACACAAGAGTCTTGCAATGCAATCT
CACAAACTGTTTCGATTTTGGAGATGACACAAGTACTACATGCATGAAAA
AGTACACAATGCCATATTGTGCTGGTGGGATGACACTGGCTTTCTGGGTT
CGCCTTTTGCGTGGGGATGAAAACAGAGACGGTTTCATGCTGCTTATTGA
TCAAGGAGCTGGTGATGATAATGCTGGTATAGCCATTAATGTCAAGCCTG
ACAAAACAGAAATAAACATCTACATCAAGCTCCTTAACAACCGATTGAAA
TGTCAATTTACGAATATTCCCAACGATATTTATCGCCAATGGTTTTTCTT
GAGCATGTCTTTCCAAAGAACGCCTTCAACAAAAATGGTTTGCTTCATGA
ATGAGGATCGTGTGGAGGTGACAACATACAGCGCAACTACTTCTAATCCA
CCCACGTCCAAATTCTTCCCTGGCGATGAAGGCAAATTCATGTTGGATGA
TATCCTCTATATTCCCAAGTTTTCGACTGATGAAATGATTTCAACTTTCT
ATGATAAAAccaaatcaaattAAatgaaccaTTTTACAAGattgttGGCG
TTTCTGTCCGTCTTTGACGTAACGAAAGCTCAGAGTACTTGTGAAAAAGC
CCAGTGTAAAAAGCAGCTCTTCGATTTCCAGGCTATTCATGGTTCCTTGG
TAAAAGTGTCAGACAAGAAATTTGCTTTATGGACGGCCAGTAAAACACTC
TCCCTCACAGGGAGTCAAGAAGAAAGAGAACGTTCTTGTTCGGAAGATTG
TGTAAAAGAAGGAAAAGACGTGTGTAGGAGTGCTCATTTGGAATCGTTTC
AATCAGAAGATACACCCTCCACCTGTGAGTTGTTCGTGGAAAATGTTTAT
GATCATTTGCCAAGTGTGTTGAGCACAATTCGAACTGATAGCACTGGTTG
GACTTCTTTTCATGTCTTGaattcatTTTGTGAAGATGCACCATGtcaaa
atattggaaaatgtGTTCCCGATTTTGCGACCAATGAAGGTGTTTGCGAA
TGTACCGGTTATTCGGGAAAATTCTGTCAAGATCTTAACCCCTTAGAAGA
GGACGGCTCGGTTTATTTCACATTCGATGATGGACAAATGAAGAATTTGG
GAAGAAGTGGCGATGTTTTAACTGAAGGAACTGGTGATGGTCTTGTTATG
TATGATATAGCACGAAACACAAGAGTCTTGCAATGCAATCTCACAAACTG
TTTCGATTTTGGAGATGACACAAGTACTACATGCATGAAAAAGTACACAA
TGCCATATTGTGCTGGTGGGATGACACTGGCTTTCTGGGTTCGCCTTTTG
CGTGGGGATGAAAACAGAGACGGTTTCATGCTGCTTATTGATCAAGGAGC
TGGTGATGATAATGCTGGTATAGCCATTAATGTCAAGCCTGACAAAACAG
AAATAAACATCTACATCAAGCTCCTTAACAACCGATTGAAATGTCAATTT
ACGAATATTCCCAACGATATTTATCGCCAATGGTTTTTCTTGAGCATGTC
TTTCCAAAGAACGCCTTCAACAAAAATGGTTTGCTTCATGAATGAGGATC
GTGTGGAGGTGACAACATACAGCGCAACTACTTCTAATCCACCCACGTCC
AAATTCTTCCCTGGCGATGAAGGCAAATTCATGTTGGATGATATCCTCTA
TATTCCCAAGTTTTCGACTGATGAAATGATTTCAACTTTCTATGATAAAA
ccaaatcaaattAAatgaaccaTTTTACAAGattgttGGCGTTTCTGTCC
GTCTTTGACGTAACGAAAGCTCAGAGTACTTGTGAAAAAGCCCAGTGTAA
AAAGCAGCTCTTCGATTTCCAGGCTATTCATGGTTCCTTGGTAAAAGTGT
CAGACAAGAAATTTGCTTTATGGACGGCCAGTAAAACACTCTCCCTCACA
GGGAGTCAAGAAGAAAGAGAACGTTCTTGTTCGGAAGATTGTGTAAAAGA
AGGAAAAGACGTGTGTAGGAGTGCTCATTTGGAATCGTTTCAATCAGAAG
ATACACCCTCCACCTGTGAGTTGTTCGTGGAAAATGTTTATGATCATTTG
CCAAGTGTGTTGAGCACAATTCGAACTGATAGCACTGGTTGGACTTCTTT
TCATGTCTTGaattcatTTTGTGAAGATGCACCATGtcaaaatattggaa
aatgtGTTCCCGATTTTGCGACCAATGAAGGTGTTTGCGAATGTACCGGT
TATTCGGGAAAATTCTGTCAAGATCTTAACCCCTTAGAAGAGGACGGCTC
GGTTTATTTCACATTCGATGATGGACAAATGAAGAATTTGGGAAGAAGTG
GCGATGTTTTAACTGAAGGAACTGGTGATGGTCTTGTTATGTATGATATA
GCACGAAACACAAGAGTCTTGCAATGCAATCTCACAAACTGTTTCGATTT
TGGAGATGACACAAGTACTACATGCATGAAAAAGTACACAATGCCATATT
GTGCTGGTGGGATGACACTGGCTTTCTGGGTTCGCCTTTTGCGTGGGGAT
GAAAACAGAGACGGTTTCATGCTGCTTATTGATCAAGGAGCTGGTGATGA
TAATGCTGGTATAGCCATTAATGTCAAGCCTGACAAAACAGAAATAAACA
TCTACATCAAGCTCCTTAACAACCGATTGAAATGTCAATTTACGAATATT
CCCAACGATATTTATCGCCAATGGTTTTTCTTGAGCATGTCTTTCCAAAG
AACGCCTTCAACAAAAATGGTTTGCTTCATGAATGAGGATCGTGTGGAGG
TGACAACATACAGCGCAACTACTTCTAATCCACCCACGTCCAAATTCTTC
CCTGGCGATGAAGGCAAATTCATGTTGGATGATATCCTCTATATTCCCAA
GTTTTCGACTGATGAAATGATTTCAACTTTCTATGATAAAAccaaatcaa
attAAatgaaccaTTTTACAAGattgttGGCGTTTCTGTCCGTCTTTGAC
GTAACGAAAGCTCAGAGTACTTGTGAAAAAGCCCAGTGTAAAAAGCAGCT
CTTCGATTTCCAGGCTATTCATGGTTCCTTGGTAAAAGTGTCAGACAAGA
AATTTGCTTTATGGACGGCCAGTAAAACACTCTCCCTCACAGGGAGTCAA
GAAGAAAGAGAACGTTCTTGTTCGGAAGATTGTGTAAAAGAAGGAAAAGA
CGTGTGTAGGAGTGCTCATTTGGAATCGTTTCAATCAGAAGATACACCCT
CCACCTGTGAGTTGTTCGTGGAAAATGTTTATGATCATTTGCCAAGTGTG
TTGAGCACAATTCGAACTGATAGCACTGGTTGGACTTCTTTTCATGTCTT
GaattcatTTTGTGAAGATGCACCATGtcaaaatattggaaaatgtGTTC
CCGATTTTGCGACCAATGAAGGTGTTTGCGAATGTACCGGTTATTCGGGA
AAATTCTGTCAAGATCTTAACCCCTTAGAAGAGGACGGCTCGGTTTATTT
CACATTCGATGATGGACAAATGAAGAATTTGGGAAGAAGTGGCGATGTTT
TAACTGAAGGAACTGGTGATGGTCTTGTTATGTATGATATAGCACGAAAC
ACAAGAGTCTTGCAATGCAATCTCACAAACTGTTTCGATTTTGGAGATGA
CACAAGTACTACATGCATGAAAAAGTACACAATGCCATATTGTGCTGGTG
GGATGACACTGGCTTTCTGGGTTCGCCTTTTGCGTGGGGATGAAAACAGA
GACGGTTTCATGCTGCTTATTGATCAAGGAGCTGGTGATGATAATGCTGG
TATAGCCATTAATGTCAAGCCTGACAAAACAGAAATAAACATCTACATCA
AGCTCCTTAACAACCGATTGAAATGTCAATTTACGAATATTCCCAACGAT
ATTTATCGCCAATGGTTTTTCTTGAGCATGTCTTTCCAAAGAACGCCTTC
AACAAAAATGGTTTGCTTCATGAATGAGGATCGTGTGGAGGTGACAACAT
ACAGCGCAACTACTTCTAATCCACCCACGTCCAAATTCTTCCCTGGCGAT
GAAGGCAAATTCATGTTGGATGATATCCTCTATATTCCCAAGTTTTCGAC
TGATGAAATGATTTCAACTTTCTATGATAAAAccaaatcaaattAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042896XLOC_042896Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068790-proteinTCONS_00068790-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068790-exon-scaffold_49-1491911889:454255..454363TCONS_00068790-exon-scaffold_49-1491911889:454255..454363Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1510915933:454255..454363TCONS_00068790-exon-scaffold_49-1510915933:454255..454363Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1575043694:454255..454363TCONS_00068790-exon-scaffold_49-1575043694:454255..454363Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1491911889:454738..454807TCONS_00068790-exon-scaffold_49-1491911889:454738..454807Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1510915933:454738..454807TCONS_00068790-exon-scaffold_49-1510915933:454738..454807Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1575043694:454738..454807TCONS_00068790-exon-scaffold_49-1575043694:454738..454807Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1491911889:455638..456016TCONS_00068790-exon-scaffold_49-1491911889:455638..456016Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1510915933:455638..456016TCONS_00068790-exon-scaffold_49-1510915933:455638..456016Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1575043694:455638..456016TCONS_00068790-exon-scaffold_49-1575043694:455638..456016Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1491911889:457768..457885TCONS_00068790-exon-scaffold_49-1491911889:457768..457885Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1510915933:457768..457885TCONS_00068790-exon-scaffold_49-1510915933:457768..457885Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1575043694:457768..457885TCONS_00068790-exon-scaffold_49-1575043694:457768..457885Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1491911889:458205..458406TCONS_00068790-exon-scaffold_49-1491911889:458205..458406Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1510915933:458205..458406TCONS_00068790-exon-scaffold_49-1510915933:458205..458406Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1575043694:458205..458406TCONS_00068790-exon-scaffold_49-1575043694:458205..458406Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1491911889:459471..459931TCONS_00068790-exon-scaffold_49-1491911889:459471..459931Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1510915933:459471..459931TCONS_00068790-exon-scaffold_49-1510915933:459471..459931Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1575043694:459471..459931TCONS_00068790-exon-scaffold_49-1575043694:459471..459931Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1491911889:460270..460869TCONS_00068790-exon-scaffold_49-1491911889:460270..460869Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1510915933:460270..460869TCONS_00068790-exon-scaffold_49-1510915933:460270..460869Clytia hemisphaericaexon
TCONS_00068790-exon-scaffold_49-1575043694:460270..460869TCONS_00068790-exon-scaffold_49-1575043694:460270..460869Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:454255..460869 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.644676	0.364591	0.93885	0.480386	0.191498	0.0893022	0.0915405	0.232818	0	0.0799314	0.191366	0.205563	0.0111327	1.94976	1.0613	1.11912	0	0	3.41715	0.0600723	0	0	0	0	6.17101	9.59306	0	0.178784	0.183028	0.137715
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068790 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top